prot_L-elsbetiae_contig10469.459.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10469.459.1
Unique Nameprot_L-elsbetiae_contig10469.459.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length128
Homology
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BLAST of mRNA_L-elsbetiae_contig10469.459.1 vs. uniprot
Match: D7FK75_ECTSI (Ubiquitin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK75_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 2.560e-51
Identity = 88/113 (77.88%), Postives = 98/113 (86.73%), Query Frame = 0 
Query:   15 DDVDEVELSAAKVALFLALDTVARARDKDRLPQLMRYVRGWFQASPSVCRWALEQMTTNNYWQHTMLLQCSLHAVRNEFLQLCLDLVRFYAPLERHMYYEEDPAIGEHFYLAA 127
            DDVDEVELS AKVALFLALDTVARA+DK+RL QLM Y + WF++SP+VCRWALEQMT NNYWQHTMLL+CSL  VR EFL LC+DLVR YAP ERH YYEEDP+IG + YLAA
Sbjct: 2045 DDVDEVELSTAKVALFLALDTVARAKDKERLSQLMGYAKRWFRSSPTVCRWALEQMTANNYWQHTMLLRCSLQGVRFEFLHLCVDLVRSYAPYERHKYYEEDPSIGANLYLAA 2157
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BLAST of mRNA_L-elsbetiae_contig10469.459.1 vs. uniprot
Match: A0A6H5KF55_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF55_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 5.700e-43
Identity = 81/113 (71.68%), Postives = 90/113 (79.65%), Query Frame = 0 
Query:   15 DDVDEVELSAAKVALFLALDTVARARDKDRLPQLMRYVRGWFQASPSVCRWALEQMTTNNYWQHTMLLQCSLHAVRNEFLQLCLDLVRFYAPLERHMYYEEDPAIGEHFYLAA 127
            DDVDEVELS AKVALFLALDTVARA+DK+RL QLM Y + WF+ASP+        MT NNYWQHTMLL+CSL  VR EFL LC+DLVR YAP ERH YYEEDP+IG + YLAA
Sbjct:  366 DDVDEVELSTAKVALFLALDTVARAKDKERLSQLMGYAKRWFRASPT--------MTANNYWQHTMLLRCSLQGVRFEFLHLCVDLVRSYAPYERHKYYEEDPSIGANLYLAA 470
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10469.459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK75_ECTSI2.560e-5177.88Ubiquitin domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KF55_9PHAE5.700e-4371.68USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10469contigL-elsbetiae_contig10469:355..1280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10469.459.1mRNA_L-elsbetiae_contig10469.459.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10469 355..1281 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10469.459.1 ID=prot_L-elsbetiae_contig10469.459.1|Name=mRNA_L-elsbetiae_contig10469.459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=128bp
GLDNNGDHHHHHGHDDVDEVELSAAKVALFLALDTVARARDKDRLPQLMR
YVRGWFQASPSVCRWALEQMTTNNYWQHTMLLQCSLHAVRNEFLQLCLDL
VRFYAPLERHMYYEEDPAIGEHFYLAAD
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