prot_L-elsbetiae_contig10449.443.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig10449.443.1
Unique Name	prot_L-elsbetiae_contig10449.443.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	161

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig10449.443.1 vs. uniprot
Match: A0A6H5L2C4_9PHAE (Cystatin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C4_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 4.620e-40
Identity = 78/156 (50.00%), Postives = 98/156 (62.82%), Query Frame = 0

Query:    6 PFLTLLLAGLSQGPVCAMADDESAAXXXXATAEAPLGKEMKPL-PGHMRPHDNRPVKSPIMPAPIVGGKMDVTGSNDQDLAEVSEFAAGILEEENSELTYVQFKAEVQVVAGMIHTLTYKGNGVDGVCKEERILVIYHRAWLKETVLKSDTTTACT 160
            P L LLL+GL            + +    A AE    +  +P  P ++RP D    + P+  AP+VG K DVTGSND+ L+EV+EFAA  L E+NSELTY+Q KAEVQVVAGM++TL Y+GN   G C EER LV+Y + WL E  LKSDT T CT
Sbjct:    5 PLLALLLSGLGSSVFAGETTTTTVSDKEAAAAEKRGDRPERPTRPTYLRPRDQMDGRGPVASAPLVGAKQDVTGSNDKHLSEVTEFAAKYLTEQNSELTYIQVKAEVQVVAGMMYTLHYRGNDAAGECLEERTLVVYDKPWLDERTLKSDTVTECT 160

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig10449.443.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig10449.443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L2C4_9PHAE	4.620e-40	50.00	Cystatin domain-containing protein n=1 Tax=Ectocar...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.10		coord: 66..158 e-value: 3.0E-7 score: 32.4
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..33
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 34..160
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..33
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.722
None	No IPR available	SUPERFAMILY	54403	Cystatin/monellin	coord: 66..153

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig10449	contig	L-elsbetiae_contig10449:1176..3374 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig10449.443.1	mRNA_L-elsbetiae_contig10449.443.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig10449 179..3479 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig10449.443.1 ID=prot_L-elsbetiae_contig10449.443.1|Name=mRNA_L-elsbetiae_contig10449.443.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=161bp
MKVVVPFLTLLLAGLSQGPVCAMADDESAAAAAAATAEAPLGKEMKPLPG
HMRPHDNRPVKSPIMPAPIVGGKMDVTGSNDQDLAEVSEFAAGILEEENS
ELTYVQFKAEVQVVAGMIHTLTYKGNGVDGVCKEERILVIYHRAWLKETV
LKSDTTTACT*