prot_L-elsbetiae_contig1021.256.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1021.256.1
Unique Nameprot_L-elsbetiae_contig1021.256.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length156
Homology
BLAST of mRNA_L-elsbetiae_contig1021.256.1 vs. uniprot
Match: A0A6H5KV61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV61_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 2.280e-26
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 0
Query:   15 GVQPHGFAQGNMAMTMGGMPSMYPS-YNPDMSIVPSGPGSHQGAVAVPEL-MDPGEVVAQSQVAVPDHMVGVILGKGGATVIDMQNQTGARIQVSQRGDYIPGTQNR 119
            G+ P GFAQG+M  T  GM SMYPS Y  +++IV       QG    PE+ MD G++V+Q QVA+PDH+VGVILGK GATVIDMQNQTGARIQVSQRG+YIPGT NR
Sbjct: 1008 GMPPQGFAQGSMMGT--GMTSMYPSPYGGEVAIV-------QGHA--PEVVMDSGDMVSQMQVAIPDHLVGVILGKRGATVIDMQNQTGARIQVSQRGEYIPGTTNR 1103          
BLAST of mRNA_L-elsbetiae_contig1021.256.1 vs. uniprot
Match: D7FM85_ECTSI (KH_dom_type_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM85_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.420e-24
Identity = 48/60 (80.00%), Postives = 55/60 (91.67%), Query Frame = 0
Query:   64 MDPGEVVAQSQVAVPDHMVGVILGKGGATVIDMQNQTGARIQVSQRGDYIPGTQNRPVTI 123
            MD G++V+Q QVA+PDH+VGVILGKGGATVIDMQNQTGARIQVSQRG+YIPGT NR V +
Sbjct:    1 MDSGDMVSQMQVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNRAVWV 60          
BLAST of mRNA_L-elsbetiae_contig1021.256.1 vs. uniprot
Match: A0A670XVA5_PSETE (KH domain-containing protein n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=A0A670XVA5_PSETE)

HSP 1 Score: 81.3 bits (199), Expect = 1.460e-16
Identity = 35/64 (54.69%), Postives = 53/64 (82.81%), Query Frame = 0
Query:   74 QVAVPDHMVGVILGKGGATVIDMQNQTGARIQVSQRGDYIPGTQNRPVTISGTPQAVANAQAMV 137
            ++AVP+++VG ILGKGG T+++ Q  TGARIQ+S++G+++PGT+NR VTI+GTP A   AQ ++
Sbjct:   63 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLI 126          
BLAST of mRNA_L-elsbetiae_contig1021.256.1 vs. uniprot
Match: UPI000695E587 (RNA-binding protein Nova-2 n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=UPI000695E587)

HSP 1 Score: 79.0 bits (193), Expect = 3.820e-16
Identity = 34/64 (53.12%), Postives = 53/64 (82.81%), Query Frame = 0
Query:   74 QVAVPDHMVGVILGKGGATVIDMQNQTGARIQVSQRGDYIPGTQNRPVTISGTPQAVANAQAMV 137
            ++AVP+++VG ILGKGG T+++ Q  TGARIQ+S++G+++PGT+NR VTI+G+P A   AQ ++
Sbjct:   29 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLI 92          
BLAST of mRNA_L-elsbetiae_contig1021.256.1 vs. uniprot
Match: A0A8C6YYB6_NOTPE (KH domain-containing protein n=1 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C6YYB6_NOTPE)

HSP 1 Score: 81.3 bits (199), Expect = 3.930e-16
Identity = 35/64 (54.69%), Postives = 53/64 (82.81%), Query Frame = 0
Query:   74 QVAVPDHMVGVILGKGGATVIDMQNQTGARIQVSQRGDYIPGTQNRPVTISGTPQAVANAQAMV 137
            ++AVP+++VG ILGKGG T+++ Q  TGARIQ+S++G+++PGT+NR VTI+GTP A   AQ ++
Sbjct:   89 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLI 152          
BLAST of mRNA_L-elsbetiae_contig1021.256.1 vs. uniprot
Match: A0A836CCL5_9STRA (KH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCL5_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 5.530e-16
Identity = 45/82 (54.88%), Postives = 59/82 (71.95%), Query Frame = 0
Query:   75 VAVPDHMVGVILGKGGATVIDMQ----NQTGARIQVSQRGDYIPGTQNRPVTISGTPQAVANAQAMV-HNVCSQAAQSEFRQ 151
            V++PD+MVG ILG+GGAT+ ++Q      +GARI VSQRGD+IPGT NR VTI+G+P A   AQ ++ H +  QAA SE  Q
Sbjct:   23 VSIPDNMVGAILGRGGATINELQASGRRTSGARINVSQRGDFIPGTSNRTVTITGSPAAAQAAQFLITHRI--QAAASEAMQ 102          
BLAST of mRNA_L-elsbetiae_contig1021.256.1 vs. uniprot
Match: A0A8B9CXC6_9AVES (KH domain-containing protein n=1 Tax=Anser brachyrhynchus TaxID=132585 RepID=A0A8B9CXC6_9AVES)

HSP 1 Score: 79.3 bits (194), Expect = 6.240e-16
Identity = 44/97 (45.36%), Postives = 62/97 (63.92%), Query Frame = 0
Query:   54 HQGAV-----AVPELMDPGEVVAQS--------QVAVPDHMVGVILGKGGATVIDMQNQTGARIQVSQRGDYIPGTQNRPVTISGTPQAVANAQAMV 137
            H GAV     A PE   P    A+         ++AVP+++VG ILGKGG T+++ Q  TGARIQ+S++GD+IPGT++R VTI+G P A   AQ ++
Sbjct:   24 HHGAVGRLGAAQPEARGPQPAGARGDEGAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGDFIPGTRSRRVTITGPPAATQAAQYLI 120          
BLAST of mRNA_L-elsbetiae_contig1021.256.1 vs. uniprot
Match: A0A6F9CUM9_9TELE (KH domain-containing protein n=3 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A6F9CUM9_9TELE)

HSP 1 Score: 81.3 bits (199), Expect = 1.560e-15
Identity = 53/135 (39.26%), Postives = 82/135 (60.74%), Query Frame = 0
Query:    3 AASGMMFGYPYPGVQPHGFAQGNMAMTMGGMPSMYPSYNPDMSIVPSGPGSHQGAVAVPELMDPGEVVAQSQVAVPDHMVGVILGKGGATVIDMQNQTGARIQVSQRGDYIPGTQNRPVTISGTPQAVANAQAMV 137
            AASG   G+P  G+   GF+ G++A   G       + +P M+            +A  +L D  + V +  +AVP+++VG ILGKGG T+++ Q  TGARIQ+S++G++IPGT+NR VTI+G+P A   AQ ++
Sbjct:  147 AASG---GHPAVGLG--GFSLGSLAAATGASNGYLNASSPLMA---------SSLLATEKLGDGAKDVVE--IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLI 265          
BLAST of mRNA_L-elsbetiae_contig1021.256.1 vs. uniprot
Match: A0A3Q4HM21_NEOBR (Uncharacterized protein n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=A0A3Q4HM21_NEOBR)

HSP 1 Score: 79.3 bits (194), Expect = 2.230e-15
Identity = 41/93 (44.09%), Postives = 63/93 (67.74%), Query Frame = 0
Query:   65 DPGEVVAQSQVAVPDHMVGVILGKGGATVIDMQNQTGARIQVSQRGDYIPGTQNRPVTISGTPQAVANAQAMVHNVCSQA--AQSEFRQIPQP 155
            DP    + + +AVP+++VG ILGKGG T+++ Q  TGARIQ+S++G++IPGT+NR VTI+G+  A   AQ ++  + + A  A+ E    P P
Sbjct:   87 DPQSSSSAAAIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQLQTSAWCAREEMPLTPPP 179          
BLAST of mRNA_L-elsbetiae_contig1021.256.1 vs. uniprot
Match: A0A6F8ZZR8_9TELE (Uncharacterized protein (Fragment) n=2 Tax=Salmonidae TaxID=8015 RepID=A0A6F8ZZR8_9TELE)

HSP 1 Score: 82.0 bits (201), Expect = 2.280e-15
Identity = 51/134 (38.06%), Postives = 79/134 (58.96%), Query Frame = 0
Query:    4 ASGMMFGYPYPGVQPHGFAQGNMAMTMGGMPSMYPSYNPDMSIVPSGPGSHQGAVAVPELMDPGEVVAQSQVAVPDHMVGVILGKGGATVIDMQNQTGARIQVSQRGDYIPGTQNRPVTISGTPQAVANAQAMV 137
            AS    G  +P V   GF+ G++A   G       + +P M+            +A  +L D  + V +  +AVP+++VG ILGKGG T+++ Q  TGARIQ+S++G++IPGT+NR VTI+G+P A   AQ ++
Sbjct:  272 ASDASGGSGHPAVGLGGFSLGSLAAATGASNGYLNASSPLMA---------SSLLAAEKLGDGAKDVVE--IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLI 394          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1021.256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV61_9PHAE2.280e-2664.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM85_ECTSI1.420e-2480.00KH_dom_type_1 domain-containing protein n=1 Tax=Ec... [more]
A0A670XVA5_PSETE1.460e-1654.69KH domain-containing protein n=1 Tax=Pseudonaja te... [more]
UPI000695E5873.820e-1653.13RNA-binding protein Nova-2 n=1 Tax=Chinchilla lani... [more]
A0A8C6YYB6_NOTPE3.930e-1654.69KH domain-containing protein n=1 Tax=Nothoprocta p... [more]
A0A836CCL5_9STRA5.530e-1654.88KH domain-containing protein n=1 Tax=Tribonema min... [more]
A0A8B9CXC6_9AVES6.240e-1645.36KH domain-containing protein n=1 Tax=Anser brachyr... [more]
A0A6F9CUM9_9TELE1.560e-1539.26KH domain-containing protein n=3 Tax=Osteoglossoce... [more]
A0A3Q4HM21_NEOBR2.230e-1544.09Uncharacterized protein n=1 Tax=Neolamprologus bri... [more]
A0A6F8ZZR8_9TELE2.280e-1538.06Uncharacterized protein (Fragment) n=2 Tax=Salmoni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 69..142
e-value: 7.4E-11
score: 52.1
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 71..146
e-value: 7.4E-23
score: 82.1
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 74..146
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 74..138
e-value: 1.5E-16
score: 59.9
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 67..137
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 70..137
score: 17.946
IPR033086RNA-binding protein Nova-1PANTHERPTHR10288:SF229RNA-BINDING PROTEIN NOVA-1coord: 67..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1021contigL-elsbetiae_contig1021:13219..15882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1021.256.1mRNA_L-elsbetiae_contig1021.256.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1021 13188..15882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1021.256.1 ID=prot_L-elsbetiae_contig1021.256.1|Name=mRNA_L-elsbetiae_contig1021.256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp
MMAASGMMFGYPYPGVQPHGFAQGNMAMTMGGMPSMYPSYNPDMSIVPSG
PGSHQGAVAVPELMDPGEVVAQSQVAVPDHMVGVILGKGGATVIDMQNQT
GARIQVSQRGDYIPGTQNRPVTISGTPQAVANAQAMVHNVCSQAAQSEFR
QIPQPG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1
IPR033086NOVA1