prot_L-elsbetiae_contig10195.242.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10195.242.1
Unique Nameprot_L-elsbetiae_contig10195.242.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length695
Homology
BLAST of mRNA_L-elsbetiae_contig10195.242.1 vs. uniprot
Match: A0A6H5JUJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUJ2_9PHAE)

HSP 1 Score: 626 bits (1615), Expect = 8.120e-203
Identity = 397/704 (56.39%), Postives = 457/704 (64.91%), Query Frame = 0
Query:    5 GAVYLLDSRTATGGGLEIAGGLEFTGNVAGRSGGGIYIENGDLTISRDA----GEEQEEGAVGGSWVGNTAGYDXXXXXXXXXXVRVEGGSASSNRAAQRGGVLFGTGESTVVWEAGGESRNNSAAAGGSLYLSSSAVNLTDLSLVGDHTPSGPNVFLASADVRAVNVSMVAPPAVLEEATFALHIDWGSKLRAFGCGFDGWGGDAPSVVSEGSVVLDACDFSGSAAQTLVHASSXXXXXXXXXXXAMAIRNAVLGDRNFERAGFNASSLLGVGVHNCASLPGELGCAVPEECVDAENGMGVLCPSFVVAATGGLFALTN----SDASXXXXXXXXXPAVELSVVAPESSQTSEARDDSLSVFYHPDVVAKELVLRSPASAAQREEEESGMGGVGGVLWELRRTDGXXXXXXXXXXXXXXXXADVGEAADENGVFAGMSADNFTWTAVPWSGFLVRGQEVTIKLVGTPPPPRDLSTPFAVYNGEISAEFRVVSCTAEAGSSVASGAAAVESMFYYCGEGYYWDGGGCVTCVEEMATMVGHGEALDCSVPGITLDTLPLAKGYWRGDITRTLVRECLNPSACIGGRGMGTSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----AALVYDETRYCAEGHRGAFCSVCADGYRRLSGGQPCVSCDGGWGSGVRAALLVVGVAAPVAVVALVVFLIGGLAAVSQ 695
            GAV ++DSR   G GL +                  Y+ NGD+ + RDA    G ++  GA   SWVGNTAGYD          V +EGG ASSN A++RGGVLFG GES V W  GGES NNSAA+GG++Y+SSS  NLTDL L GDHTPSG N+F A AD RAVNV+ VAP  +  EATFALH+D GS  RAF C F+GW GD+PSV+SEG +VLD CDFSGS   TLV AS            A+ IRNAVLGD+NF  AGFNASSLLGVG H C+SLP EL C+V EECVDAENGMGVLCPSF   ATGGL +L +    +D                                  +  Y+PD+V  ELVLR   S           G   GVLW L+RTDG                     A DE G F G + D FTWTAVPWSG+LVRGQEVTI+LVGTPPPP D S  FAVYNGE++AEFRVV+ TA A S+ AS AA VE  FYYC  G YWDG  CVTC + MATM     +LDCS PGITLDTLPLA+GYWRGDIT+T +R+C NPSAC GG G+ TSS+ XXXXXXXXXXXXXXXXXXXXXXXXXXXX     ++  Y++TRYC +GHRGA+C+VCADGYRR SGGQ CVSC G W SG RA   V+GV + V V+AL VFLIGGL AVS+
Sbjct:  489 GAVCVIDSREDDGLGLRLXXXXXXXXXXXXXXXXXXYVVNGDVAVVRDATAAAGGDELPGA---SWVGNTAGYDGGVIAVDGGGVWLEGGLASSNSASERGGVLFGIGESNVSWSGGGESWNNSAASGGTIYVSSSVANLTDLRLAGDHTPSGANLFFAGADARAVNVTAVAPEEL--EATFALHVDSGSAFRAFACVFEGWDGDSPSVLSEGEMVLDVCDFSGSGTPTLVRASR-----------AVTIRNAVLGDQNFGHAGFNASSLLGVGAHGCSSLPEELSCSVAEECVDAENGMGVLCPSFTEDATGGLVSLADVEDENDGVGFSTVELVSSXXXXXXXXXXXXXXXXXXXXXTAEVYYPDLVTHELVLRY--SXXXXXXXXXXXGSQVGVLWRLQRTDGDGGAQA---------------ADDETGAFEGAAPDYFTWTAVPWSGYLVRGQEVTIQLVGTPPPPPDPSAVFAVYNGEVAAEFRVVTRTAAADSAAASVAAGVERTFYYCAAGSYWDGETCVTCAQAMATMADGEGSLDCSAPGITLDTLPLAEGYWRGDITQTYIRKCWNPSACAGGTGVITSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATASSFEYEDTRYCIKGHRGAYCAVCADGYRRFSGGQLCVSCGGVWSSGARATFWVLGVVSLVVVMALAVFLIGGLTAVSR 1159          
BLAST of mRNA_L-elsbetiae_contig10195.242.1 vs. uniprot
Match: D8LTT7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT7_ECTSI)

HSP 1 Score: 624 bits (1609), Expect = 2.030e-199
Identity = 402/705 (57.02%), Postives = 453/705 (64.26%), Query Frame = 0
Query:    6 AVYLLDSRTATGGGLEIAGGLEFTGNVAGRSGGGIYIENGDLTISRDA----GEEQEEGAVGGSWVGNTAGYDXXXXXXXXXXVRVEGGSASSNRAAQRGGVLFGTGESTVVWEAGGESRNNSAAAGGSLYLSSSAVNLTDLSLVGDHTPSGPNVFLASADVRAVNVSMVAPPAVLEEATFALHIDWGSKLRAFGCGFDGWGGDAPSVVSEGSVVLDACDFSGSAAQTLVHASSXXXXXXXXXXXAMAIRNAVLGDRNFERAGFNASSLLGVGVHNCASLPGELGCAVPEECVDAENGMGVLCPSFVVAATGGLFALTNSDASXXXXXXXXXPAVE----LSVVAPESSQTSEARDDSLSVFYHPDVVAKELVLRSPASAAQREEEESGMGGVGGVLWELRRTDGXXXXXXXXXXXXXXXXADVGEAADENGVFAGMSADNFTWTAVPWSGFLVRGQEVTIKLVGTPPPPRDLSTPFAVYNGEISAEFRVVSCTAEAGSSVASGAAAVESMFYYCGEGYYWDGGGCVTCVEEMATMVGHGE-ALDCSVPGITLDTLPLAKGYWRGDITRTLVRECLNPSACIGGRGMGTSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------AALVYDETRYCAEGHRGAFCSVCADGYRRLSGGQPCVSCDGGWGSGVRAALLVVGVAAPVAVVALVVFLIGGLAAVSQ 695
            AVY++DSR   G GL +                     NGD+T+ RDA    G E+  GA   SWVGNTAGYDXXXX      V +EGG ASSN A++RGGVLFG GES V W  GGES NNSAA+GG++Y+SSS  NLTDL L GDHTPSG N+F A AD RAVNV+ VAP  +  EATFALH+D GS  RAF C F+GW GD+PSVVSEG +VLDACDFSGS   TLV AS             + IRNAVLGD+NF  AGFNASSLLGVG H C+SLP EL C+VPEECVDAENGMGVLCPSF  AATGGLF L + +             V                             PD+V  ELVLR               G   GVLW L+RTDG                     A DE G F G + DNF WTAVPWSG+LVRGQEVTI+LVGTPPPP D S PFAVYNGE++A+FRVV+ TA A S   S A  VE  FYYC  G YW G  CV C E MA     GE +L+CSVPG+TLDTLPLA+GYWRGDIT+T +REC NPSAC GG G+  SS XXXXXXXXXXXXXXXXXXXXXXXXXX         A+  Y++ RYC EGHRGA+C+VCADGYRR SGGQ CVSC G W +G RA L V+G+ +PV VVALVVFLIGGL AVSQ
Sbjct:  488 AVYVVDSREDNGLGLRMXXXXXXXXXXXXXXXXXXXXXNGDVTVVRDATAAVGGEELPGA---SWVGNTAGYDXXXXAVDGGGVWLEGGLASSNSASERGGVLFGIGESNVSWSGGGESWNNSAASGGTIYVSSSVANLTDLRLAGDHTPSGANLFFAGADARAVNVTAVAPEEL--EATFALHVDSGSAFRAFACVFEGWSGDSPSVVSEGDMVLDACDFSGSGTPTLVRASR-----------TVTIRNAVLGDQNFGHAGFNASSLLGVGAHGCSSLPEELSCSVPEECVDAENGMGVLCPSFTEAATGGLFTLADVEDEDDGVGFSTVELVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXPDLVTHELVLRXXXXXXXXXXXXX-XGSQLGVLWRLQRTDGDGGAQA---------------ADDETGAFEGAAPDNFAWTAVPWSGYLVRGQEVTIQLVGTPPPPPDPSAPFAVYNGEVAAKFRVVTRTAAADSVATSVATEVERTFYYCAAGSYWHGEACVACAEVMA----DGEDSLECSVPGVTLDTLPLAEGYWRGDITQTYIRECWNPSACAGGTGVNASSXXXXXXXXXXXXXXXXXXXXXXXXXXXTTADVNATAASFEYEDARYCIEGHRGAYCAVCADGYRRFSGGQLCVSCAGVWSTGARATLWVLGMLSPVVVVALVVFLIGGLTAVSQ 1156          
BLAST of mRNA_L-elsbetiae_contig10195.242.1 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 6.550e-14
Identity = 63/210 (30.00%), Postives = 87/210 (41.43%), Query Frame = 0
Query:  435 SADNFTWTAVPWSGFLVRGQEVTIKLVGTPPPPRDLSTPFAVYNGEISAEFRVVSCTAEAGSSVASGAAAVESMFYYCGEGYYWDGGGCVTCVEEMATMVGHGEALDCSVPGITLDTLPLAKGYWRGDITRTLVRECLNPSACIGGRGMGTSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALVYDETRYCAEGHRGAFCSVCADGY 644
            S +  TW+ VP  G L  G   T  + G+      L++ F   NG   A F+     AE+  S  +  A V + FYYC EG Y++   C+ C +        GE LDC  PG+   TLP+A GYWR     T +R+CL   AC GG                                       ++     YCA G++G +C+VC  GY
Sbjct: 1289 STEALTWSIVPNVGILEEGGSATAVITGS------LTSDF---NGPTHALFK-----AESRQSGNTALAMVNTTFYYCLEGEYFNDEECLLCSDLEL----DGEGLDCDEPGVLQSTLPVASGYWRSSADTTTIRQCLYEEACKGG--------------------------------------TVISQSDDYCAVGYQGPYCAVCLSGY 1442          
BLAST of mRNA_L-elsbetiae_contig10195.242.1 vs. uniprot
Match: A0A835YMX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMX7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.870e-10
Identity = 49/148 (33.11%), Postives = 61/148 (41.22%), Query Frame = 0
Query:  512 CGEGYYWDGGGCVTCVEEMATMVGHGEALDCSVPGITLDTLPLAKGYWRGDIT--RTLVRECLNPSACIGGRGMGTSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALVYDETRYCAEGHRGAFCSVCADGYRRLSGGQ--PCVS 655
            C +G Y     CVTC  E+         LDC VPG+T+ TLPL KG+WRG++T  +  +  C N  ACIGG                                          D   YCA+GH G +C+VC  GY    G Q  PC S
Sbjct:  807 CQKGNYMGADQCVTCDTEV---------LDCQVPGVTIKTLPLRKGWWRGNLTLAQADILPCWNADACIGGAPS---------------------------------------DSNGYCADGHEGPYCAVCKKGYTSFIGRQCYPCTS 906          
BLAST of mRNA_L-elsbetiae_contig10195.242.1 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 6.010e-5
Identity = 71/251 (28.29%), Postives = 114/251 (45.42%), Query Frame = 0
Query:   62 VGGSWVGNTAG-YDXXXXXXXXXXVRVEGGSASSNRAAQRGGVLFGTGESTVVWEAGGESRNNSAAAGGSLYLSSSAVNLT-DLSLVGDHTPSGPNVFLAS-ADVRAVNVSMVAPPAVLEEATF-ALHIDWGSKLRAFGCGFDGWGGDAP---SVVSEGSVVLDACDFSGSAAQTLVHASSXXXXXXXXXXXAMAIRNAVLGDRNFERAGF-NASSLLGVGVHNCASLPGELGCAVPEECVDAENGMGVLC 304
             GG +V NTA  Y           +  EG +   + A  +GG ++G   + V   +  +   N+A  G ++YL+ + +    D   V D+  SG +VF A+   + A  ++  +   + E+++  A+ ++  + L A GC F GW GD     +  + GS+ LD+CDFS SAA  +V +                IRNA++     E A   N S +L     +C    G  G     ECVD+   +GVLC
Sbjct:  142 TGGYFVNNTAKFYGGFIFLEEEASLSCEGATIRDHSAGDQGGGIYGRDAAWV--NSSCDLIGNAAPQGAAVYLTHTVMAANFDNHEVTDNVASGGSVFYATDTALFATGLNFQSGVGLQEDSSNRAIQLEGETTLVAEGCVFGGWMGDTVIRNANTAPGSLTLDSCDFSESAAVMVVTSPQSDTI----------IRNAIVDHLTIENAALVNDSLVLVDNAFDC----GTPGICAAGECVDSV--LGVLC 374          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10195.242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JUJ2_9PHAE8.120e-20356.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTT7_ECTSI2.030e-19957.02Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5JU65_9PHAE6.550e-1430.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YMX7_9STRA2.870e-1033.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FRH1_ECTSI6.010e-528.29Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 666..693
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 694..695
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..665
NoneNo IPR availableTMHMMTMhelixcoord: 671..693
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 510..659

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10195contigL-elsbetiae_contig10195:2517..6213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10195.242.1mRNA_L-elsbetiae_contig10195.242.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10195 2517..6213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10195.242.1 ID=prot_L-elsbetiae_contig10195.242.1|Name=mRNA_L-elsbetiae_contig10195.242.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=695bp
NRWGGAVYLLDSRTATGGGLEIAGGLEFTGNVAGRSGGGIYIENGDLTIS
RDAGEEQEEGAVGGSWVGNTAGYDGGVIAVDGGGVRVEGGSASSNRAAQR
GGVLFGTGESTVVWEAGGESRNNSAAAGGSLYLSSSAVNLTDLSLVGDHT
PSGPNVFLASADVRAVNVSMVAPPAVLEEATFALHIDWGSKLRAFGCGFD
GWGGDAPSVVSEGSVVLDACDFSGSAAQTLVHASSSSSSSRGAAAAAMAI
RNAVLGDRNFERAGFNASSLLGVGVHNCASLPGELGCAVPEECVDAENGM
GVLCPSFVVAATGGLFALTNSDASSSSAAAAAAPAVELSVVAPESSQTSE
ARDDSLSVFYHPDVVAKELVLRSPASAAQREEEESGMGGVGGVLWELRRT
DGDGGGGGGGGGGGGGGGADVGEAADENGVFAGMSADNFTWTAVPWSGFL
VRGQEVTIKLVGTPPPPRDLSTPFAVYNGEISAEFRVVSCTAEAGSSVAS
GAAAVESMFYYCGEGYYWDGGGCVTCVEEMATMVGHGEALDCSVPGITLD
TLPLAKGYWRGDITRTLVRECLNPSACIGGRGMGTSSASSSSESAITAAV
STDQTTVTAAAAAAAAGAALVYDETRYCAEGHRGAFCSVCADGYRRLSGG
QPCVSCDGGWGSGVRAALLVVGVAAPVAVVALVVFLIGGLAAVSQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009030Growth_fac_rcpt_cys_sf