prot_L-elsbetiae_contig1016.211.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1016.211.1
Unique Nameprot_L-elsbetiae_contig1016.211.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length358
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1016.211.1 vs. uniprot
Match: A0A6H5KTR0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTR0_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 9.900e-61
Identity = 196/302 (64.90%), Postives = 221/302 (73.18%), Query Frame = 0 
Query:   56 PPASERLKPQPFRRKFPPLHFQASVRGDVDELAKWLQSGGDPNARDEEGWALLHHATMHGREECVQLLLKQGARHDMVSIGGHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQVCGATAEAIGLVEEARRLKQARIAQRLALVKIHKLWNSGRAEPCGVSDGGVMTSAVAGVEAIVVALEDAGQDTGEAGXXGEASNQAAAAGASKSPIRHTCPCRCVQGEKEIGQAARLSRAQQASLEATVAGVAGLPQEVLRRVVSYCTL 357
            P ++ERLKPQPFRRK PP+HFQASVRGD+ EL KWL SGGDPN+RD+EGWALLHHA+MHGRE+CV LLL+ GARHD V+IGGHT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  V GATAE + L++ ARRLK+ARIAQR ALVKIH L NSGRA+P               +  ++ A E A   +           +  A G S SP   + P      E  +GQ  +  R    SL  TVA +AGLPQEVLRR+V YCTL
Sbjct:   76 PMSAERLKPQPFRRKDPPMHFQASVRGDLQELNKWLISGGDPNSRDDEGWALLHHASMHGREDCVGLLLRYGARHDRVAIGGHTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSGATAEVVHLIQAARRLKKARIAQRFALVKIHCLSNSGRAKP--------------NIGVVISAAETANDASSYRERQARTPVEGTAKGESASPEAASTPRVLGGSEPSVGQQQQQPRP---SLNCTVAAIAGLPQEVLRRIVGYCTL 360
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1016.211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KTR0_9PHAE9.900e-6164.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 169..198
e-value: 7.7E-4
score: 28.8
coord: 69..99
e-value: 2300.0
score: 2.3
coord: 136..165
e-value: 6.5E-4
score: 29.0
coord: 103..132
e-value: 0.009
score: 25.2
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 169..200
e-value: 2.2E-4
score: 21.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 169..201
score: 12.235
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 136..168
score: 12.823
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 103..135
score: 9.992
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 74..167
e-value: 5.1E-16
score: 59.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 78..206
score: 36.79
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 62..252
e-value: 4.3E-40
score: 139.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 74..209
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 138..232
coord: 72..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1016contigL-elsbetiae_contig1016:21169..25299 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1016.211.1mRNA_L-elsbetiae_contig1016.211.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1016 21053..27308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1016.211.1 ID=prot_L-elsbetiae_contig1016.211.1|Name=mRNA_L-elsbetiae_contig1016.211.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=358bp
MCVATKMVAMFRSVSSCCNKNRACEDDDEDFLPKTSLTLAPTTTTTRAAT
TTEDGPPASERLKPQPFRRKFPPLHFQASVRGDVDELAKWLQSGGDPNAR
DEEGWALLHHATMHGREECVQLLLKQGARHDMVSIGGHTVLHLASANRHC
DVVKRLVEAGARVNVKNAHGNTPLHSAAATGTGDVLLYLLSQSANPDLVN
SVGETPDQVCGATAEAIGLVEEARRLKQARIAQRLALVKIHKLWNSGRAE
PCGVSDGGVMTSAVAGVEAIVVALEDAGQDTGEAGGEGEASNQAAAAGAS
KSPIRHTCPCRCVQGEKEIGQAARLSRAQQASLEATVAGVAGLPQEVLRR
VVSYCTL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf