prot_L-elsbetiae_contig10128.177.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10128.177.1
Unique Nameprot_L-elsbetiae_contig10128.177.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length258
Homology
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BLAST of mRNA_L-elsbetiae_contig10128.177.1 vs. uniprot
Match: A0A6H5LFU5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFU5_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 2.030e-9
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 0 
Query:    1 MKAKIEAARRARELASPRPHTKKRAASFAGGRSTPRSSQEGWSG 44
            MKAKIEAARRARELASPRPHTKKR +SFAGGRSTPRSS  G SG
Sbjct: 2287 MKAKIEAARRARELASPRPHTKKRTSSFAGGRSTPRSSSHGASG 2330
[Close]
BLAST of mRNA_L-elsbetiae_contig10128.177.1 vs. uniprot
Match: D8LHA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA8_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 4.850e-9
Identity = 39/46 (84.78%), Postives = 40/46 (86.96%), Query Frame = 0 
Query:    1 MKAKIEAARRARELASPRPHTKKRAASFAGGRSTPRSSQEGWSGVG 46
            MKAKIEAARRARELASPRPHTKKR +SFAGGRSTPRSS  G S  G
Sbjct: 1821 MKAKIEAARRARELASPRPHTKKRTSSFAGGRSTPRSSSHGGSSGG 1866
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10128.177.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LFU5_9PHAE2.030e-988.64Reverse transcriptase domain-containing protein n=... [more]
D8LHA8_ECTSI4.850e-984.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10128contigL-elsbetiae_contig10128:3694..4887 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10128.177.1mRNA_L-elsbetiae_contig10128.177.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10128 3013..5252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10128.177.1 ID=prot_L-elsbetiae_contig10128.177.1|Name=mRNA_L-elsbetiae_contig10128.177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=258bp
MKAKIEAARRARELASPRPHTKKRAASFAGGRSTPRSSQEGWSGVGATSR
GAAGRRAAAARTKARSSSESGGSTPGPRGRARKAAGSGGGGGGSSPRTPP
SRQQAFSPSPPPATAAVAPGTSSGGVEASAAPSPAAGMPPGSTAAAAAVV
VANPGGGVGGCAAVGGTVDRGRVSLPVLDAVAENSAVGEATEKTVEGEEV
REGGDGSGAGGAEPSPSVASGAVSSAAAVVAVSATAAPATPAPAAAIETA
PTPPPAV*
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