prot_L-elsbetiae_contig10126.176.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10126.176.1
Unique Nameprot_L-elsbetiae_contig10126.176.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length462
Homology
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BLAST of mRNA_L-elsbetiae_contig10126.176.1 vs. uniprot
Match: D7FMM3_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM3_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 4.970e-59
Identity = 256/465 (55.05%), Postives = 289/465 (62.15%), Query Frame = 0 
Query:   11 RALLRGRGEEILVLVVKESTKLQLKEWLRLPLELSPADAAFLLERNQCCHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXENALIAGKTSLVQPLLAAGAGLARAVI---RRDS---------------GNGNDAGRGAXXXXXXXXXXXXXXXXXXXXXXXXXXCRVDHLAPASPTSSEARHAXXXXXXXXXXXXXXXXPSPDLR-------LAAAVSXXXXXXXXVSSPSCRSTRGTGCNGSTPGRSASSRSVXXXXXXXXXXXXXXXXGRRGRSRGAGGPASPREAELDSLSLHRATMARDSGRMRELLAAGVDRNATDLWSCTALHRAAEQVDGCAEHVRLXXXXXXXXXXXXXXXXXXXXXAAARGAETAVVDLIAAESCLAERGINGDTPLHSAVRFLSLATVRILLESDADEAAVNGDGETPSDVMGVLPDGRDIENQPDPLVVEAIKALLEAAPQERR 450
            RA LRGRGE++LV+V+K S++ Q  EWLR P  LSP     L +R QCC + XXXXXXXXXXXXXXXXXXXXXXXXXX E+A+ AGK  LV+PLLAAGAGLA AV    RR+                G  + +G G XXXXXXXXXXXXXXXXXXXXXXXX      H    +P   +A                     P +R        ++  S         SSP C S          PG S+S    XXXXXXXXXX           S  +   A+      D L LHRATMARD+G MRELLAAGVDRNA DLW CTALHRAAEQ +  AEH   XXXXXXXXXXXXXXXXXXXXXAAARGAETAVVDL    SCL++RG NG     SAVRFLSL TVRILL+SDADEAA N DG+TP +V GV PDGR +ENQP P+V   I ALL+AA   R+
Sbjct:   12 RASLRGRGEDLLVIVLKRSSRAQSTEWLRFPRVLSPDAKCLLQKREQCCEIRXXXXXXXXXXXXXXXXXXXXXXXXXXLEHAVEAGKGWLVEPLLAAGAGLAGAVGGGGRREXXXKGAGTAAVAVPGPGKPSCSGGGXXXXXXXXXXXXXXXXXXXXXXXXXASSSCGHTPHRTPVKQQAGLDFAWACSAPSTPPSCSTGPPSIRPDGGEPSASSGCSRNFGSQAPPSSPRCGS----------PGASSSXXXXXXXXXXXXXXDHA--------SSHSPTAAAIASVTSDPLCLHRATMARDAGLMRELLAAGVDRNAVDLWDCTALHRAAEQ-ERSAEHXXXXXXXXXXXXXXXXXXXXXXXXAAARGAETAVVDLXXXXSCLSDRGNNGXXXXXSAVRFLSLPTVRILLDSDADEAAKNNDGQTPREVTGVHPDGRPLENQPGPVVPRKIVALLDAAVLRRK 457
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10126.176.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMM3_ECTSI4.970e-5955.05Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM3... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 376..405
e-value: 0.061
score: 22.5
coord: 275..304
e-value: 1400.0
score: 3.9
coord: 308..339
e-value: 25.0
score: 13.8
coord: 343..372
e-value: 77.0
score: 12.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 376..408
score: 10.686
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 343..364
score: 8.683
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 313..402
e-value: 2.7E-12
score: 47.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 275..413
score: 29.919
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 269..420
e-value: 2.2E-30
score: 107.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 83..415
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 178..366
coord: 324..415

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10126contigL-elsbetiae_contig10126:3264..5177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10126.176.1mRNA_L-elsbetiae_contig10126.176.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10126 3076..6083 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10126.176.1 ID=prot_L-elsbetiae_contig10126.176.1|Name=mRNA_L-elsbetiae_contig10126.176.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=462bp
MERADEGVPQRALLRGRGEEILVLVVKESTKLQLKEWLRLPLELSPADAA
FLLERNQCCHLRGKGEELLEVVMDCASDEQWCKWLQIPLENALIAGKTSL
VQPLLAAGAGLARAVIRRDSGNGNDAGRGAAAAAAATSARDQETSACSAS
SSSSSSCRVDHLAPASPTSSEARHAAAAPVATSSSAASSCCPSPDLRLAA
AVSPAAAAAAAVSSPSCRSTRGTGCNGSTPGRSASSRSVSSPSPSASPST
GTESSGRRGRSRGAGGPASPREAELDSLSLHRATMARDSGRMRELLAAGV
DRNATDLWSCTALHRAAEQVDGCAEHVRLLLAAGLDVRAKDMEGYTPLHF
AAARGAETAVVDLIAAESCLAERGINGDTPLHSAVRFLSLATVRILLESD
ADEAAVNGDGETPSDVMGVLPDGRDIENQPDPLVVEAIKALLEAAPQERR
TRVQETDSTRM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf