prot_L-elsbetiae_contig1010.153.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1010.153.1
Unique Nameprot_L-elsbetiae_contig1010.153.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length525
Homology
BLAST of mRNA_L-elsbetiae_contig1010.153.1 vs. uniprot
Match: D7FP76_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP76_ECTSI)

HSP 1 Score: 721 bits (1860), Expect = 5.620e-258
Identity = 363/438 (82.88%), Postives = 395/438 (90.18%), Query Frame = 0
Query:  103 PEDAFALGGEERLQKFLSHAGLDSRRQCEQMILDGQVRVNGKMVKELGVKVNPRRDQVHVNGERVFMRPSSEIKWVALNKQKGTICTVSDELGRPTAVSAIPRGQEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVSLTSGYPTPEEWEVLTQGMLLDGDPNPTRPCIVEVINYDRRTRLTTVDIIIREGKNRQIRRMFEGIGHDVKSIMRISHGPIRIKSLKPGEWRELEQWEIEKLKNLTTKTLKSPTKQLAPTPTRAEGRHREVA--GRVSSRKTSQQQYHESAHRRDALDEEEDEWNKVGAWDRSGVRKAVAPSAR--------------------PVFVEDEDHEWQTASWARKDDREPTKEGTGKGSRATGKFSRKAKLNEGDRLLEKIKKGDVKLDAPAWEGGGRVDRDNRSNAAKGKG 518
            P DAFALGGEERLQKFLSHAGLDSRRQCEQMILDG+VRVNGKMVKELGVKVNPRRDQVHV+G RV MRP SEIKWVALNK KG ICTVSDELGRPTAV++IPRG EMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRV+LTSGYPT EEW+VLTQGMLLDGDPNPTRPCIVEV+NYDRRTR+TTVDIIIREGKNRQIRRMFEGIGH+VKSI R+SHGPIR+K+L+PGEWRELEQWEIEKLKNLTTKTLKSP KQLAPTPTRAEGRHR+ A  GR+SSR TSQQQYH S +RRDALDEEEDEWN+VGAWDRSGVRKAVAPSAR                    P F +D+DHEWQTASWARKD++EPT++GTGKGSR++    RKA++NEGDR+LE+IKKGDVKL+APAWEGGGRVDRDNRSNA++ KG
Sbjct:   25 PPDAFALGGEERLQKFLSHAGLDSRRQCEQMILDGRVRVNGKMVKELGVKVNPRRDQVHVDGNRVSMRPDSEIKWVALNKPKGVICTVSDELGRPTAVASIPRGLEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVALTSGYPTTEEWDVLTQGMLLDGDPNPTRPCIVEVVNYDRRTRVTTVDIIIREGKNRQIRRMFEGIGHEVKSITRVSHGPIRLKNLRPGEWRELEQWEIEKLKNLTTKTLKSPAKQLAPTPTRAEGRHRQAAAAGRMSSRMTSQQQYHGSEYRRDALDEEEDEWNQVGAWDRSGVRKAVAPSARAGAPATTASARGGGTPPQGEPAFFDDDDHEWQTASWARKDEKEPTRQGTGKGSRSSS-GKRKARVNEGDRILERIKKGDVKLEAPAWEGGGRVDRDNRSNASRKKG 461          
BLAST of mRNA_L-elsbetiae_contig1010.153.1 vs. uniprot
Match: A0A6H5JKH0_9PHAE (S4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKH0_9PHAE)

HSP 1 Score: 648 bits (1671), Expect = 3.830e-228
Identity = 350/438 (79.91%), Postives = 375/438 (85.62%), Query Frame = 0
Query:    1 MPSLQDNSMIRLHPRVAGALAVSLWLLGTAQCFLAPPLAPRLNGITGASRITSSRSRLSSSA----RVXXXXXXXTSVMAMLGGGRGGRXXXXXXXXXXXXXXXGLPEDAFALGGEERLQKFLSHAGLDSRRQCEQMILDGQVRVNGKMVKELGVKVNPRRDQVHVNGERVFMRPSSEIKWVALNKQKGTICTVSDELGRPTAVSAIPRGQEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVSLTSGYPTPEEWEVLTQGMLLDGDPNPTRPCIVEVINYDRRTRLTTVDIIIREGKNRQIRRMFEGIGHDVKSIMRISHGPIRIKSLKPGEWRELEQWEIEKLKNLTTKTLKSPTKQLAPTPTRAEGRHREVA--GRVSSRKTSQQQYHESAHRRDALDEEEDEWNKVGAWDRSGVRKAVAPSAR 432
            MPS ++ S+ RLHPRV   L  +LWLLGTAQC +APP A    G+   +RI  SRS   SS     +        T VM M     GG XXXXXXXXXXXXX  G P DAFALGGEERLQKFLSHAGLDSRRQCEQMILDG+VRVNGKMVKELGVKVNPRRDQVHV+G RV MRP SEIKWVALNK KG ICTVSDELGRPTAV +IPRG EMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRV+LTSGYPT EEW+VLTQGMLLDGDPNPTRPCIVEV+NYDRRTR+TTVDIIIREGKNRQIRRMFEGIGH+VKSI R+SHGPIR+K+L+PGEWR+LEQWEIEKLKNLTTKTLKSP KQLAPTPTRAEGRHR+ A  GR+SSR TSQQQYH S +RRDALDEEEDEWN+VGAWDRSGVRKAVAPSAR
Sbjct:    1 MPSPREYSVARLHPRVPRTLVAALWLLGTAQCLVAPPSARLTGGVPNGARIVGSRSWHDSSPCCVRQRSTGSRARTHVMVM----PGGXXXXXXXXXXXXXXARGTPPDAFALGGEERLQKFLSHAGLDSRRQCEQMILDGRVRVNGKMVKELGVKVNPRRDQVHVDGNRVSMRPDSEIKWVALNKPKGVICTVSDELGRPTAVGSIPRGLEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVALTSGYPTTEEWDVLTQGMLLDGDPNPTRPCIVEVVNYDRRTRVTTVDIIIREGKNRQIRRMFEGIGHEVKSITRVSHGPIRLKNLRPGEWRQLEQWEIEKLKNLTTKTLKSPAKQLAPTPTRAEGRHRQAAAAGRMSSRMTSQQQYHGSEYRRDALDEEEDEWNQVGAWDRSGVRKAVAPSAR 434          
BLAST of mRNA_L-elsbetiae_contig1010.153.1 vs. uniprot
Match: A0A836CPN1_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPN1_9STRA)

HSP 1 Score: 325 bits (834), Expect = 3.140e-104
Identity = 150/253 (59.29%), Postives = 196/253 (77.47%), Query Frame = 0
Query:  101 GLPEDAFALGGEERLQKFLSHAGLDSRRQCEQMILDGQVRVNGKMVKELGVKVNPRRDQVHVNGERVFMRPSSEIKWVALNKQKGTICTVSDELGRPTAVSAIPRGQEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVSLTSGYPTPEEWEVLTQGMLLDGDPNPTRPCIVEVINYDRRTRLTTVDIIIREGKNRQIRRMFEGIGHDVKSIMRISHGPIRIKSLKPGEWRELEQWEIEKLK 353
            G  +D   LG  ERL K L+HAG+DSRRQCEQMILDG+VRVNGK+V  LG +V+PR+D + V+G++V +R   E  WVA++K KG I + +DELGR T V  IP    MRL+PVGRLDRDS GLLLLTN+N+W+N LTHPSYGHEK YRV++T GYP+P  W+ +T+GM+L+G+  PT+PC +E+I+YD R +   +D+++REGKNRQIRRMFE IGH V++I R+ HGPI +K L+PGEWR L   E+E+LK
Sbjct:   27 GAAKDQLRLGSSERLHKVLAHAGVDSRRQCEQMILDGRVRVNGKIVSSLGTRVDPRKDDLLVDGQKVALRSREETAWVAIHKPKGVITSTNDELGRRTVVDLIPGADRMRLLPVGRLDRDSAGLLLLTNDNAWVNVLTHPSYGHEKLYRVAITEGYPSPPAWKKVTEGMMLEGETAPTQPCDIEIISYDERRKHLVLDVVLREGKNRQIRRMFEAIGHPVRAITRLKHGPIGLKQLRPGEWRALTASEVERLK 279          
BLAST of mRNA_L-elsbetiae_contig1010.153.1 vs. uniprot
Match: A0A7S2WX07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX07_9STRA)

HSP 1 Score: 241 bits (616), Expect = 8.690e-71
Identity = 142/337 (42.14%), Postives = 201/337 (59.64%), Query Frame = 0
Query:  110 GGEERLQKFLSHAGLDSRRQCEQMILDGQVRVNGKMVKELGVKVNPRRDQVHVNGERVFMRPSSEIKWVALNKQKGTICTVSDELGRPTAVSAIPRGQEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVSLTSGYPTPEEWEVLTQGMLLDGDPNPTRPCIVEVINYDRRTRLTTVDIIIREGKNRQIRRMFEGIGHDVKSIMRISHGPIRIKSLKPGEWRELEQWEIEKLKNLTTKTLKSPTKQLAPTPTRAEGRHREVAGRVSSRKTSQQQYHESAHRRDALDEEEDEWNKV---GAWDRS----GVRKAVAPSARPVFVEDE 439
            G + RLQK LSHAG+ SRR+ E+ I DG+V VN ++V ELG KV+P++D+V V+GE V  RP  EI+WVA+ K KG +CT+ DE  R T + A+P     RL+PVGRLDR+S GLLLLTN+NSW++ LTHPS+G  K YR+ +  G+ + +    + QG+ L  +     PC VE ++ D R R T++ I+++EG+NRQIRRM + +G  VKS+ R S G + ++ L PG+WREL + E++ LK   T   +   +   P   R     R+  G  S R+          HR    D  +D   KV   G  D S    GV  A  P +RP+  +D+
Sbjct:   88 GDKMRLQKLLSHAGVCSRREAERYIEDGRVTVNERLVTELGTKVDPQKDRVTVDGELVSQRPVEEIRWVAMYKPKGVVCTMEDEKDRKTVMDALPGASRARLLPVGRLDRNSAGLLLLTNDNSWLHKLTHPSHGCTKMYRI-VVEGFLSNDVLRRIAQGLQLPDEERKLSPCAVEFVDQDLRQRTTSLRIVLQEGRNRQIRRMMDFVGFPVKSLTRTSVGSVGLRDLSPGDWRELSKKEVDALKRTCTPRHRGDRRATTPRDRRDPAAGRQKGG--SDRE----------HRERTADHTQD-LEKVFVGGELDSSDLAPGVVTARKPISRPLMTDDD 410          
BLAST of mRNA_L-elsbetiae_contig1010.153.1 vs. uniprot
Match: A0A0G4HIW2_9ALVE (S4 domain-containing protein (Fragment) n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HIW2_9ALVE)

HSP 1 Score: 241 bits (615), Expect = 3.440e-70
Identity = 119/248 (47.98%), Postives = 172/248 (69.35%), Query Frame = 0
Query:  108 ALGGEERLQKFLSHAGLDSRRQCEQMILDGQVRVNGKMVKELGVKVNPRRDQVHVNGERVFMRPSSEIKWVALNKQKGTICTVSDELGRPTAVSAIPRGQEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVSLTSGYPTPEEWEVLTQGMLLDGDPNPTRPCIVEVINYDRRTR--LTTVDIIIREGKNRQIRRMFEGIGHDVKSIMRISHGPIRIKSLKPGEWRELEQWEIEKLK 353
            ++  +ERLQK +S +G+ SRR  E +I +G+VRVNG++VK++G +VNPR DQ+ V+G+R+ MRP SEIKW+ L+K KG ICT++DE  R + +  +P    +RL+PVGRLDRDS GL+LLTN+N+W++ L+HPS+GH KTY+V + +G P  +  E L +GM L  D   T P  + V+  ++  +  L ++ + + EG+NRQIRRMFE IGH V SI RI  GP+ +  +  G WR+L   EI  LK
Sbjct:  136 SVADKERLQKVISRSGISSRRAAEDLIEEGRVRVNGRVVKQMGTRVNPRLDQIQVDGKRISMRPPSEIKWILLHKPKGYICTMADERDRKSVLDLVPFASRLRLLPVGRLDRDSSGLILLTNDNAWLHLLSHPSFGHLKTYKVKVKNGVPFGDVLEPLAKGMYLGSDKEKTSPVEIRVMLDEKSHKEPLGSMTVSLLEGRNRQIRRMFESIGHPVHSIKRIRFGPLDLDKVGVGSWRQLNPTEIYSLK 383          
BLAST of mRNA_L-elsbetiae_contig1010.153.1 vs. uniprot
Match: A0A0G4ETA8_VITBC (S4 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ETA8_VITBC)

HSP 1 Score: 239 bits (611), Expect = 4.030e-70
Identity = 122/258 (47.29%), Postives = 176/258 (68.22%), Query Frame = 0
Query:  113 ERLQKFLSHAGLDSRRQCEQMILDGQVRVNGKMVKELGVKVNPRRDQVHVNGERVFMRPSSEIKWVALNKQKGTICTVSDELGRPTAVSAIPRGQEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVSLTSGYPTPEEWEVLTQGMLLDGDPNPTRPCIVEVINYDRRTRLT--TVDIIIREGKNRQIRRMFEGIGHDVKSIMRISHGPIRIKSLK-PGEWRELEQWEIEKLKNLTTKTLKSPTKQL 367
            ERLQK +S AG+ SRR  E+MILDG+VRVNG +V +LGVKV+   D+V V+G ++ +RP  EIKW+A++K KG IC+++D+  R T    +P  + +RL+PVGRLDRDS GLLLLTN+N W++PLTHPSYGH+K Y V++ +G P  +    L +G+LL G+   T P  + V    + +R +  T+++ +REG+NRQ+RRM E IGH V +I R+  GP+ +K +  PG+WREL+  E+  LK       K+  + L
Sbjct:  137 ERLQKVISRAGIASRRAAEEMILDGRVRVNGVVVTDLGVKVDALGDRVTVDGRKIAVRPPEEIKWIAVHKPKGYICSMNDDRDRKTVKDLVPMAERLRLLPVGRLDRDSSGLLLLTNDNKWLHPLTHPSYGHQKRYIVTVDNGTPKYDVLNELAEGVLLPGERTKTAPVSIGVFFEPKTSRKSFGTLEVTLREGRNRQLRRMMEFIGHPVLNIRRVDFGPLTLKGITTPGQWRELKPSEVFMLKRAVITRAKARERML 394          
BLAST of mRNA_L-elsbetiae_contig1010.153.1 vs. uniprot
Match: A0A7R9UB15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB15_9STRA)

HSP 1 Score: 216 bits (551), Expect = 5.410e-61
Identity = 112/248 (45.16%), Postives = 168/248 (67.74%), Query Frame = 0
Query:  114 RLQKFLSHAGLDSRRQCEQMILDGQVRVNGKMVKELGVKVNPRRDQVHVNGERVFMRPSSEIKWVALNKQKGTICTVSDELGRPTAVSAIPRGQEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVSLTSGYPTPEEWEVLTQG-MLLDGDPNPTRP-CIVEVINYDRRTRLTTVDIIIREGKNRQIRRMFEGIGHDVKSIMRISHGPIRIKSLKPGEWRELEQWEIEKLKNLTTKT 359
            R+QK L+ AG+ SRR  E+++ DG+VRVNGK+V   G K  P    + V+G  V  R  + I W  ++K KG + T+ D+LGR T    +PR +E+RLVPVGRLDRD+ G++LLTN+N W++ L+HP++GH K YRV + +G    + +  L +G ++L+GD  P  P  + E I+Y   T+ T++++I+REG+NRQIRRM E +GH V++I+R + GPI + SLK GEWR L + E+ +LK  + K+
Sbjct:  185 RVQKLLASAGICSRRDAEKLMADGRVRVNGKLVTTPGTKAKPDA-VITVDGMPVVQRDRNSIFWCVVHKPKGVLVTMEDDLGRKTVADLVPRARELRLVPVGRLDRDTSGVILLTNDNEWVHRLSHPAFGHLKRYRVVVKNGPVKADVYRTLQRGGVVLEGDERPLAPLAVAEEISYYADTKETSIEMILREGRNRQIRRMMEQLGHPVRTIVRTAVGPIGLGSLKAGEWRTLRKSEVLQLKASSEKS 431          
BLAST of mRNA_L-elsbetiae_contig1010.153.1 vs. uniprot
Match: A0A7S0AM87_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AM87_9DINO)

HSP 1 Score: 213 bits (543), Expect = 1.550e-57
Identity = 117/267 (43.82%), Postives = 170/267 (63.67%), Query Frame = 0
Query:  102 LPEDAFALG-GEERLQKFLSHAGLDSRRQCEQMILDGQVRVNGKMVKELGVKVNPRRDQVHVNGERVFMRPSSEIKWVALNKQKGTICTVSDELGRPTAVSAIPRGQEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVSLTSGYPTPEEWEVLTQGMLLDGDPNPTRPCI-VEVINYDRRTRLTTVDIIIREGKNRQIRRMFEGIGHDVKSIMRISHGPIRI-KSLKPGEWRELEQWEIEKLKNLTTKTLKSPTK 365
            L ED  A+G GE  L KFLSHAG  SRR+  +++L G+V++NG++V+++  KV+P++D+V ++G+R  ++   EI W+ LNK KG I T  D  GR T +  +P  ++ RL+PVGR+DR++ GLLLLTN+  W   + HP Y H K Y+V + +G P+  + + L  G+ L  +P P  P    EV+  ++   + T+   ++EGK RQIRRMFE IGH VKSI R   G +++ +SLK GEWR L   EI +LK  T   LK P K
Sbjct:  250 LSEDLPAIGTGEVWLNKFLSHAGACSRRKVAELVLQGRVQINGEVVQDICTKVDPKKDKVFLDGQRKELKTLGEIIWIMLNKPKGVISTFEDSEGRKTVMDLVPFAKKRRLIPVGRIDRNAAGLLLLTNDYEWQTIMIHPRYEHTKRYKVEIYNGLPSRVKMQALRNGLELPDEPRPLLPLEDFEVMQQNKTDEIATIKFTLKEGKYRQIRRMFEYIGHPVKSIKRTEFGLLQLDRSLKAGEWRMLTPKEIRRLKGPTI--LKRPMK 514          
BLAST of mRNA_L-elsbetiae_contig1010.153.1 vs. uniprot
Match: A0A0M9UDB6_9CHLR (Pseudouridine synthase n=1 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0M9UDB6_9CHLR)

HSP 1 Score: 193 bits (491), Expect = 1.820e-54
Identity = 115/259 (44.40%), Postives = 165/259 (63.71%), Query Frame = 0
Query:  112 EERLQKFLSHAGLDSRRQCEQMILDGQVRVNGKMVKELGVKVNPRRDQVHVNGERVFMRPSSEIKWVALNKQKGTICTVSDELGRPTAVSAIPRGQEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVSLTSGYPTPEEWEVLTQGMLLDGDPNPTRPCIVEVINYDRRTRLTTV-DIIIREGKNRQIRRMFEGIGHDVKSIMRISHGPIRIKSLKPGEWRELEQWEIEKLKNLT------TKTLKSP 363
            +ERLQK L+ AG+ SRR+ E+MI  G+V VNG+MV ELG KV+P +D++ V+G RV +    + +++AL+K +  I T+ D+ GR T V  +P   E  LVPVGRLD +S GL+LLTN+   +N LTHP Y HEK Y V +  G+P  + +E +  G++L+ D   T P  V V   +R+T  TT+  +I+REG+ RQIRRMF  +GH V+ + R+  GPI + +L  G WREL   E++ L+ L       TKT + P
Sbjct:    3 KERLQKVLARAGVASRREAEEMIRQGRVDVNGRMVTELGTKVDPEQDEIRVDGVRVRLDQVRK-RYIALHKPRHYITTMRDQFGRKTVVDLVPFAAEEHLVPVGRLDAESEGLILLTNDGDLVNVLTHPRYQHEKEYVVEVY-GHPNEDFFEAVKHGVVLE-DGTRTLPAKVRV---ERKTDDTTILRVILREGRKRQIRRMFGILGHPVRKLKRVRIGPITLGNLPRGAWRELTPKEVKALQQLVREQTRKTKTARRP 255          
BLAST of mRNA_L-elsbetiae_contig1010.153.1 vs. uniprot
Match: A0A124FD53_9FIRM (Pseudouridine synthase n=2 Tax=Clostridia TaxID=186801 RepID=A0A124FD53_9FIRM)

HSP 1 Score: 192 bits (489), Expect = 3.270e-54
Identity = 115/243 (47.33%), Postives = 161/243 (66.26%), Query Frame = 0
Query:  113 ERLQKFLSHAGLDSRRQCEQMILDGQVRVNGKMVKELGVKVNPRRDQVHVNGERVFMRPSSEIKWVALNKQKGTICTVSDELGRPTAVSAIPRGQEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVSLTSGYPTPEEWEVLTQGMLLDGDPNPTRPCIVEVINYDRRTRLTTVDIIIREGKNRQIRRMFEGIGHDVKSIMRISHGPIRIKSLKPGEWRELEQWEIEKLKNL 355
            ERLQK L+  G+ SRR+CE++IL+G+V+VNGK+V +LG KV+   D++ V+G+ V  +  +E  +V  NK KG I TV D  GR T +  + + ++ R+ PVGRLDRD+ GLLLLTN+      LTHPS+  EKTY V + +G P+ ++ E L+QG+ L+     T P   E+I   RR+    V I IREG+ RQIRRMF+ IG  V ++ RI  GP+ +K LKPGE+R L++ EI KLK L
Sbjct:    2 ERLQKVLAQCGIASRRKCEKIILEGRVKVNGKVVTQLGTKVHE-NDRIEVDGKPVVRK--NEKIYVLFNKPKGCITTVYDPFGRKTVMDYLNKFKDYRIFPVGRLDRDTEGLLLLTNDGQLSFALTHPSHQVEKTYLVEI-NGTPSKKQLERLSQGVYLED--GKTLPAETELIRGGRRS---LVKITIREGRKRQIRRMFKAIGFSVLNLKRIKFGPLVLKDLKPGEYRLLKESEISKLKEL 235          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1010.153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP76_ECTSI5.620e-25882.88Pseudouridine synthase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JKH0_9PHAE3.830e-22879.91S4 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A836CPN1_9STRA3.140e-10459.29Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2WX07_9STRA8.690e-7142.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G4HIW2_9ALVE3.440e-7047.98S4 domain-containing protein (Fragment) n=1 Tax=Ch... [more]
A0A0G4ETA8_VITBC4.030e-7047.29S4 domain-containing protein n=1 Tax=Vitrella bras... [more]
A0A7R9UB15_9STRA5.410e-6145.16Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S0AM87_9DINO1.550e-5743.82Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
A0A0M9UDB6_9CHLR1.820e-5444.40Pseudouridine synthase n=1 Tax=Ardenticatena marit... [more]
A0A124FD53_9FIRM3.270e-5447.33Pseudouridine synthase n=2 Tax=Clostridia TaxID=18... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 113..174
e-value: 9.1E-13
score: 58.4
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 113..155
e-value: 7.9E-13
score: 47.9
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 113..182
score: 13.947
IPR000748Pseudouridine synthase, RsuA/RluB/E/FTIGRFAMTIGR00093TIGR00093coord: 181..345
e-value: 1.3E-40
score: 136.7
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 177..314
e-value: 7.2E-16
score: 58.7
IPR042092Pseudouridine synthase, RsuA/RluB/E/F, catalytic domainGENE3D3.30.70.1560coord: 244..332
e-value: 8.1E-48
score: 164.0
NoneNo IPR availableGENE3D3.30.70.580coord: 177..349
e-value: 8.1E-48
score: 164.0
NoneNo IPR availablePANTHERPTHR21600:SF2RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 112..357
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 112..357
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..524
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 98..218
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 111..170
e-value: 1.2E-20
score: 74.5
IPR018496Pseudouridine synthase, RsuA/RluB/E/F, conserved sitePROSITEPS01149PSI_RSUcoord: 215..229
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 178..349

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1010contigL-elsbetiae_contig1010:1524..11124 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1010.153.1mRNA_L-elsbetiae_contig1010.153.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1010 1524..11124 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1010.153.1 ID=prot_L-elsbetiae_contig1010.153.1|Name=mRNA_L-elsbetiae_contig1010.153.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=525bp
MPSLQDNSMIRLHPRVAGALAVSLWLLGTAQCFLAPPLAPRLNGITGASR
ITSSRSRLSSSARVRQSSRARTSVMAMLGGGRGGRGGGGGRGGRGRGRGR
GLPEDAFALGGEERLQKFLSHAGLDSRRQCEQMILDGQVRVNGKMVKELG
VKVNPRRDQVHVNGERVFMRPSSEIKWVALNKQKGTICTVSDELGRPTAV
SAIPRGQEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRV
SLTSGYPTPEEWEVLTQGMLLDGDPNPTRPCIVEVINYDRRTRLTTVDII
IREGKNRQIRRMFEGIGHDVKSIMRISHGPIRIKSLKPGEWRELEQWEIE
KLKNLTTKTLKSPTKQLAPTPTRAEGRHREVAGRVSSRKTSQQQYHESAH
RRDALDEEEDEWNKVGAWDRSGVRKAVAPSARPVFVEDEDHEWQTASWAR
KDDREPTKEGTGKGSRATGKFSRKAKLNEGDRLLEKIKKGDVKLDAPAWE
GGGRVDRDNRSNAAKGKGKGAAGW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR000748PsdUridine_synth_RsuA/RluB/E/F
IPR006145PsdUridine_synth_RsuA/RluA
IPR042092PsdUridine_s_RsuA/RluB/E/F_cat
IPR036986S4_RNA-bd_sf
IPR018496PsdUridine_synth_RsuA/RluB_CS
IPR020103PsdUridine_synth_cat_dom_sf