prot_L-elsbetiae_contig10063.108.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10063.108.1
Unique Nameprot_L-elsbetiae_contig10063.108.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length84
Homology
BLAST of mRNA_L-elsbetiae_contig10063.108.1 vs. uniprot
Match: D7G3D3_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D3_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 5.270e-50
Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 0
Query:    1 RGLRESSGGSRVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFGRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEDGCCDRHR 81
            R LRE SGGSRVCGYVFKRGDIAWNCRKCQVDSTCVQCDACF RSDHTGHPVYFHRTAPGGCCDCGDEEAWAE+GCC RHR
Sbjct:   79 RSLREMSGGSRVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEEGCCSRHR 159          
BLAST of mRNA_L-elsbetiae_contig10063.108.1 vs. uniprot
Match: A0A7S2LKQ2_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LKQ2_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.610e-39
Identity = 56/71 (78.87%), Postives = 59/71 (83.10%), Query Frame = 0
Query:   11 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFGRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEDGCCDRHR 81
            R CGYVFKRGD+AWNCR CQ DSTCV CDACF  SDHTGH V FH+T+PGGCCDCGD EAWA  GCCD HR
Sbjct:   35 RPCGYVFKRGDMAWNCRTCQTDSTCVLCDACFQASDHTGHEVSFHQTSPGGCCDCGDVEAWAAKGCCDLHR 105          
BLAST of mRNA_L-elsbetiae_contig10063.108.1 vs. uniprot
Match: A0A7S3P848_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P848_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.240e-38
Identity = 56/71 (78.87%), Postives = 57/71 (80.28%), Query Frame = 0
Query:   11 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFGRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEDGCCDRHR 81
            R CGYVF+RGDIAWNCR CQ D TCV CD CF RSDH GH VYFHRT PGGCCDCGD EAW  DGCCD HR
Sbjct:   51 RPCGYVFQRGDIAWNCRTCQTDPTCVICDDCFRRSDHQGHEVYFHRTTPGGCCDCGDMEAWKIDGCCDVHR 121          
BLAST of mRNA_L-elsbetiae_contig10063.108.1 vs. uniprot
Match: A0A7S4EF35_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EF35_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.800e-38
Identity = 55/71 (77.46%), Postives = 56/71 (78.87%), Query Frame = 0
Query:   11 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFGRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEDGCCDRHR 81
            R CGYVFKRGDIAWNCR CQ DSTCV CD CF  SDH GH VYFHRT PGGCCDCGD EAW  +GCC  HR
Sbjct:   27 RPCGYVFKRGDIAWNCRTCQTDSTCVICDTCFRSSDHEGHEVYFHRTTPGGCCDCGDAEAWKPEGCCPAHR 97          
BLAST of mRNA_L-elsbetiae_contig10063.108.1 vs. uniprot
Match: A0A7S4V6U6_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V6U6_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.940e-38
Identity = 54/71 (76.06%), Postives = 58/71 (81.69%), Query Frame = 0
Query:   11 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFGRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEDGCCDRHR 81
            R CGYVF+RGDIAWNCR CQ DSTCV CD CF  SDH GH V+FHRT+PGGCCDCGD EAW  +GCC RHR
Sbjct:   44 RPCGYVFRRGDIAWNCRTCQTDSTCVLCDRCFHESDHEGHEVFFHRTSPGGCCDCGDIEAWKIEGCCPRHR 114          
BLAST of mRNA_L-elsbetiae_contig10063.108.1 vs. uniprot
Match: A0A1Z5JKC4_FISSO (E3 ubiquitin-protein ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKC4_FISSO)

HSP 1 Score: 139 bits (349), Expect = 2.430e-36
Identity = 56/74 (75.68%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    8 GGSRVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFGRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEDGCCDRHR 81
            G  R CGYVFKRGDIAWNCR CQ D+TCV CD CF  SDH GH VYFHRT+PGGCCDCGD EAW  +GCCD+HR
Sbjct:  182 GRPRPCGYVFKRGDIAWNCRTCQTDATCVICDTCFRHSDHQGHEVYFHRTSPGGCCDCGDAEAWKSEGCCDKHR 255          
BLAST of mRNA_L-elsbetiae_contig10063.108.1 vs. uniprot
Match: A0A7S2SCK7_9STRA (E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCK7_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.240e-35
Identity = 52/71 (73.24%), Postives = 57/71 (80.28%), Query Frame = 0
Query:   13 CGYVFKRGDIAWNCRKCQVDSTCVQCDACFGRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEDGCCDRHRAP 83
            CGYVFKRGDIAWNCR CQ DSTCV CD CF  S+H GH V+FHRT+PGGCCDCGD EAW  +GCC +H  P
Sbjct:  135 CGYVFKRGDIAWNCRTCQADSTCVLCDECFRNSNHKGHEVFFHRTSPGGCCDCGDTEAWKAEGCCSKHVPP 205          
BLAST of mRNA_L-elsbetiae_contig10063.108.1 vs. uniprot
Match: A0A7R9YGT1_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGT1_9STRA)

HSP 1 Score: 135 bits (339), Expect = 5.400e-35
Identity = 54/77 (70.13%), Postives = 61/77 (79.22%), Query Frame = 0
Query:    5 ESSGGSRVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFGRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEDGCCDRHR 81
            E +   R CGYVF+ GDI WNCR C+ DSTCVQCDACF  SDHTGH V+FH+ +P GCCDCGDEEAWA +GCC RHR
Sbjct:   86 EDANPKRYCGYVFREGDICWNCRTCEKDSTCVQCDACFQLSDHTGHDVFFHKASPNGCCDCGDEEAWAWEGCCPRHR 162          
BLAST of mRNA_L-elsbetiae_contig10063.108.1 vs. uniprot
Match: A0A6S8VUG7_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8VUG7_9STRA)

HSP 1 Score: 134 bits (338), Expect = 7.420e-35
Identity = 55/71 (77.46%), Postives = 58/71 (81.69%), Query Frame = 0
Query:   11 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFGRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEDGCCDRHR 81
            R CGYVF+RGDIAWNCR CQ DSTCV CDACF  SDH GH VYFHRT+PGGCCDCGD EAW  +GCC  HR
Sbjct:  216 RPCGYVFRRGDIAWNCRTCQYDSTCVLCDACFHASDHEGHEVYFHRTSPGGCCDCGDSEAWRIEGCCPLHR 286          
BLAST of mRNA_L-elsbetiae_contig10063.108.1 vs. uniprot
Match: A0A7S1Z3G4_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z3G4_9STRA)

HSP 1 Score: 134 bits (336), Expect = 7.960e-35
Identity = 54/71 (76.06%), Postives = 58/71 (81.69%), Query Frame = 0
Query:   11 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFGRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEDGCCDRHR 81
            R CGYVF+RGDIAWNCR CQ DSTCV CD CF  SDH GH V+FHRT+PGGCCDCGD EAW  +GCC RHR
Sbjct:  289 RPCGYVFRRGDIAWNCRTCQTDSTCVLCDRCFHESDHEGHEVFFHRTSPGGCCDCGDIEAWKVEGCCPRHR 359          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10063.108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3D3_ECTSI5.270e-5093.83E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A7S2LKQ2_9STRA3.610e-3978.87E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Lep... [more]
A0A7S3P848_9STRA1.240e-3878.87E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amp... [more]
A0A7S4EF35_9STRA1.800e-3877.46E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pse... [more]
A0A7S4V6U6_9STRA1.940e-3876.06E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dit... [more]
A0A1Z5JKC4_FISSO2.430e-3675.68E3 ubiquitin-protein ligase n=2 Tax=Fistulifera so... [more]
A0A7S2SCK7_9STRA1.240e-3573.24E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Euc... [more]
A0A7R9YGT1_9STRA5.400e-3570.13E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pin... [more]
A0A6S8VUG7_9STRA7.420e-3577.46E3 ubiquitin-protein ligase n=1 Tax=Chaetoceros de... [more]
A0A7S1Z3G4_9STRA7.960e-3576.06E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003126Zinc finger, UBR-typeSMARTSM00396push_1coord: 11..81
e-value: 1.4E-16
score: 71.1
IPR003126Zinc finger, UBR-typePFAMPF02207zf-UBRcoord: 13..80
e-value: 7.4E-18
score: 64.5
IPR003126Zinc finger, UBR-typePROSITEPS51157ZF_UBRcoord: 11..82
score: 9.966
NoneNo IPR availableGENE3D2.10.110.30coord: 13..82
e-value: 2.7E-22
score: 80.5
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 8..80
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 8..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10063contigL-elsbetiae_contig10063:418..4694 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10063.108.1mRNA_L-elsbetiae_contig10063.108.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10063 416..4694 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10063.108.1 ID=prot_L-elsbetiae_contig10063.108.1|Name=mRNA_L-elsbetiae_contig10063.108.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=84bp
RGLRESSGGSRVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFGRSDHTGH
PVYFHRTAPGGCCDCGDEEAWAEDGCCDRHRAPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003126Znf_UBR
IPR039164UBR1-like