prot_L-elsbetiae_contig10.7.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig10.7.1
Unique Name	prot_L-elsbetiae_contig10.7.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	111

Homology

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BLAST of mRNA_L-elsbetiae_contig10.7.1 vs. uniprot
Match: A0A6B7EVB8_9PHAE (Cytochrome c6 n=3 Tax=Ectocarpales TaxID=2877 RepID=A0A6B7EVB8_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 5.990e-66
Identity = 98/109 (89.91%), Postives = 103/109 (94.50%), Query Frame = 0

Query:    1 MKNFFFGFFISCLVLISFCNPAGAVDINNGGSVFTANCSACHSGGNNVIMPEKTLKKDALGANQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIQDVANYVLSQSEKGW 109
            MKNFF GFFISCL +ISF NPA AVDINNG SVFTANCSACH+GGNNVIMPEKTLKKDALG NQMNSV+AITYQVTNGKNAMPAFGGRLSE+DIQDVAN+VLSQSEKGW
Sbjct:    1 MKNFFLGFFISCLAMISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVNAITYQVTNGKNAMPAFGGRLSEEDIQDVANFVLSQSEKGW 109

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BLAST of mRNA_L-elsbetiae_contig10.7.1 vs. uniprot
Match: A0A8F0F8D4_9PHAE (Cytochrome c6 n=4 Tax=Alariaceae TaxID=2887 RepID=A0A8F0F8D4_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 8.390e-62
Identity = 92/111 (82.88%), Postives = 102/111 (91.89%), Query Frame = 0

Query:    1 MKNFFFGFFISCLVLISFCNPAGAV-DINNGGSVFTANCSACHSGGNNVIMPEKTLKKDALGANQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIQDVANYVLSQSEKGWD 110
            MKNFFFGFFI+CL LISF NPA AV D+NNG ++FTANCSACH+GGNNVIMPEKTLKKDAL  NQMNS+ AITYQVTNGKNAMPAFGGRLSE DI+DVAN+VLSQ++KGWD
Sbjct:    1 MKNFFFGFFIACLALISFQNPAQAVPDLNNGSNIFTANCSACHAGGNNVIMPEKTLKKDALATNQMNSISAITYQVTNGKNAMPAFGGRLSEPDIEDVANFVLSQADKGWD 111

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BLAST of mRNA_L-elsbetiae_contig10.7.1 vs. uniprot
Match: A0A6G6D7E1_ECTSI (Cytochrome c6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A6G6D7E1_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 9.490e-61
Identity = 92/110 (83.64%), Postives = 100/110 (90.91%), Query Frame = 0

Query:    1 MKNFFFGFFISCLVLISFCNPAGAVDINNGGSVFTANCSACHSGGNNVIMPEKTLKKDALGANQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIQDVANYVLSQSEKGWD 110
            MKNFF GFFISCL LISF N A AVDINNG SVF ANCSACH+GGNNVIMPEKTL+K+ALGAN MNSV+AITYQVTNGKNAMPAFGGRLSE DI+DVAN+VLS++E GWD
Sbjct:    1 MKNFFLGFFISCLALISFYNSAEAVDINNGESVFVANCSACHAGGNNVIMPEKTLRKEALGANNMNSVNAITYQVTNGKNAMPAFGGRLSEPDIEDVANFVLSKAEGGWD 110

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BLAST of mRNA_L-elsbetiae_contig10.7.1 vs. uniprot
Match: A0A0S0GBE4_COSCS (Cytochrome c6 n=20 Tax=Laminariales TaxID=2886 RepID=A0A0S0GBE4_COSCS)

HSP 1 Score: 189 bits (480), Expect = 1.920e-60
Identity = 90/110 (81.82%), Postives = 101/110 (91.82%), Query Frame = 0

Query:    1 MKNFFFGFFISCLVLISFCNPAGAVDINNGGSVFTANCSACHSGGNNVIMPEKTLKKDALGANQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIQDVANYVLSQSEKGWD 110
            MKNFFFGFFI+CL LISF NPA AVDINNG +VFTANCSACH+GGNNVIMPEKTLKK+AL  N+M+SV AITYQVTNGKNAMPAFGGRL+E DI+DVAN+VLSQS+K W+
Sbjct:    1 MKNFFFGFFIACLALISFQNPAQAVDINNGENVFTANCSACHAGGNNVIMPEKTLKKEALSQNKMDSVSAITYQVTNGKNAMPAFGGRLAESDIEDVANFVLSQSDKNWE 110

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BLAST of mRNA_L-elsbetiae_contig10.7.1 vs. uniprot
Match: A0A5A4MJ73_9PHAE (Cytochrome c6 n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MJ73_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 2.720e-60
Identity = 93/109 (85.32%), Postives = 97/109 (88.99%), Query Frame = 0

Query:    1 MKNFFFGFFISCLVLISFCNPAGAVDINNGGSVFTANCSACHSGGNNVIMPEKTLKKDALGANQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIQDVANYVLSQSEKGW 109
            MKNFF GFFISCL LISF NPA AVDINNG SVFTANCSACH+GGNNVIMPEKTLKK AL  NQM SV AITYQVTNGKNAMPAFGGRLSE DI+DVAN+VLSQS+K W
Sbjct:    1 MKNFFLGFFISCLTLISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKGALEENQMGSVKAITYQVTNGKNAMPAFGGRLSESDIEDVANFVLSQSDKDW 109

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BLAST of mRNA_L-elsbetiae_contig10.7.1 vs. uniprot
Match: A0A8E8U4P1_9PHAE (Cytochrome c6 n=3 Tax=Alaria TaxID=2888 RepID=A0A8E8U4P1_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 2.720e-60
Identity = 87/110 (79.09%), Postives = 101/110 (91.82%), Query Frame = 0

Query:    1 MKNFFFGFFISCLVLISFCNPAGAVDINNGGSVFTANCSACHSGGNNVIMPEKTLKKDALGANQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIQDVANYVLSQSEKGWD 110
            MKNFFFGFFI+CL LISF NPA A+DINNG ++FTANCSACH+GGNNVIMPEKTLKKDAL  N+MN++ AITYQVTNGKNAMPAFG RL+E DI+DVAN+V++QS+KGWD
Sbjct:    1 MKNFFFGFFIACLALISFQNPAQAIDINNGENIFTANCSACHAGGNNVIMPEKTLKKDALADNKMNTIGAITYQVTNGKNAMPAFGSRLAETDIEDVANFVITQSDKGWD 110

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BLAST of mRNA_L-elsbetiae_contig10.7.1 vs. uniprot
Match: A0A8F0JZA5_9PHAE (Cytochrome c6 n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0JZA5_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.110e-59
Identity = 91/110 (82.73%), Postives = 100/110 (90.91%), Query Frame = 0

Query:    1 MKNFFFGFFISCLVLISFCNPAGAVDINNGGSVFTANCSACHSGGNNVIMPEKTLKKDALGANQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIQDVANYVLSQSEKGWD 110
            MKNFFFGFFI+ L LISF N A AVDINNGG++FTANCSACH+GGNNVIM EKTLKKDAL  NQMNSV AITYQVTNGKNAMPAFGGRL+E DI+DVAN+VLS+SE+GWD
Sbjct:    1 MKNFFFGFFIASLALISFQNSAQAVDINNGGNIFTANCSACHAGGNNVIMIEKTLKKDALSDNQMNSVKAITYQVTNGKNAMPAFGGRLAESDIEDVANFVLSKSEEGWD 110

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BLAST of mRNA_L-elsbetiae_contig10.7.1 vs. uniprot
Match: A0A8F0F6Q3_AKKLU (Cytochrome c6 n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F6Q3_AKKLU)

HSP 1 Score: 186 bits (473), Expect = 2.240e-59
Identity = 90/110 (81.82%), Postives = 99/110 (90.00%), Query Frame = 0

Query:    1 MKNFFFGFFISCLVLISFCNPAGAVDINNGGSVFTANCSACHSGGNNVIMPEKTLKKDALGANQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIQDVANYVLSQSEKGWD 110
            MK FFFGFFI+CL LIS  NPA AVDINNG ++FTANCSACH+GGNNVIMPEKTLKK+AL  N MNSV AITYQVTNGKNAMPAFGGRLSEDDI+DVAN+VL+QS KGW+
Sbjct:    1 MKKFFFGFFIACLTLISSHNPAQAVDINNGENIFTANCSACHAGGNNVIMPEKTLKKNALEENSMNSVGAITYQVTNGKNAMPAFGGRLSEDDIEDVANFVLAQSGKGWE 110

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BLAST of mRNA_L-elsbetiae_contig10.7.1 vs. uniprot
Match: A0A516ICP1_9PHAE (Cytochrome c6 n=2 Tax=Lessonia TaxID=105411 RepID=A0A516ICP1_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.840e-58
Identity = 90/110 (81.82%), Postives = 97/110 (88.18%), Query Frame = 0

Query:    1 MKNFFFGFFISCLVLISFCNPAGAVDINNGGSVFTANCSACHSGGNNVIMPEKTLKKDALGANQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIQDVANYVLSQSEKGWD 110
            MKNFFFGFFI CL LISF NPA AVDINNG +VF ANCSACH GG NVIM +KTLKKDAL  N MN+VDAITYQVTNGKNAMPAFGGRL+E DIQDVAN+VLS+S+KGWD
Sbjct:    1 MKNFFFGFFIVCLALISFQNPAQAVDINNGENVFVANCSACHVGGANVIMVDKTLKKDALDRNSMNTVDAITYQVTNGKNAMPAFGGRLAETDIQDVANFVLSKSDKGWD 110

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BLAST of mRNA_L-elsbetiae_contig10.7.1 vs. uniprot
Match: A0A8F0JYP6_9PHAE (Cytochrome c6 n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0JYP6_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 3.050e-57
Identity = 87/109 (79.82%), Postives = 96/109 (88.07%), Query Frame = 0

Query:    1 MKNFFFGFFISCLVLISFCNPAGAVDINNGGSVFTANCSACHSGGNNVIMPEKTLKKDALGANQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIQDVANYVLSQSEKGW 109
            MK FFFGFFI+CL LIS  NPA AVDINNG ++FTANCSACH+GGNNVIMPEKTLKK+AL  N MN V+AITYQVTNGKNAMPAFG RLSEDDI+DVAN+VLSQ+ K W
Sbjct:    1 MKKFFFGFFIACLTLISSHNPAQAVDINNGENIFTANCSACHAGGNNVIMPEKTLKKEALSDNLMNKVEAITYQVTNGKNAMPAFGSRLSEDDIEDVANFVLSQAAKDW 109

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig10.7.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig10.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6B7EVB8_9PHAE	5.990e-66	89.91	Cytochrome c6 n=3 Tax=Ectocarpales TaxID=2877 RepI...	[more]
A0A8F0F8D4_9PHAE	8.390e-62	82.88	Cytochrome c6 n=4 Tax=Alariaceae TaxID=2887 RepID=...	[more]
A0A6G6D7E1_ECTSI	9.490e-61	83.64	Cytochrome c6 n=1 Tax=Ectocarpus siliculosus TaxID...	[more]
A0A0S0GBE4_COSCS	1.920e-60	81.82	Cytochrome c6 n=20 Tax=Laminariales TaxID=2886 Rep...	[more]
A0A5A4MJ73_9PHAE	2.720e-60	85.32	Cytochrome c6 n=5 Tax=Scytosiphonaceae TaxID=2891 ...	[more]
A0A8E8U4P1_9PHAE	2.720e-60	79.09	Cytochrome c6 n=3 Tax=Alaria TaxID=2888 RepID=A0A8...	[more]
A0A8F0JZA5_9PHAE	1.110e-59	82.73	Cytochrome c6 n=2 Tax=Ecklonia TaxID=105406 RepID=...	[more]
A0A8F0F6Q3_AKKLU	2.240e-59	81.82	Cytochrome c6 n=1 Tax=Akkesiphycus lubricus TaxID=...	[more]
A0A516ICP1_9PHAE	1.840e-58	81.82	Cytochrome c6 n=2 Tax=Lessonia TaxID=105411 RepID=...	[more]
A0A8F0JYP6_9PHAE	3.050e-57	79.82	Cytochrome c6 n=1 Tax=Pseudochorda nagaii TaxID=74...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008168	Cytochrome c, class IC	PRINTS	PR00605	CYTCHROMECIC	coord: 36..47 score: 53.5 coord: 79..101 score: 52.0
IPR009056	Cytochrome c-like domain	PFAM	PF13442	Cytochrome_CBB3	coord: 26..101 e-value: 3.7E-16 score: 59.2
IPR009056	Cytochrome c-like domain	PROSITE	PS51007	CYTC	coord: 25..105 score: 14.255
IPR036909	Cytochrome c-like domain superfamily	GENE3D	1.10.760.10		coord: 25..110 e-value: 1.1E-36 score: 127.2
IPR036909	Cytochrome c-like domain superfamily	SUPERFAMILY	46626	Cytochrome c	coord: 5..109
None	No IPR available	PANTHER	PTHR34688	FAMILY NOT NAMED	coord: 13..110
None	No IPR available	PANTHER	PTHR34688:SF2	CYTOCHROME C6, CHLOROPLASTIC	coord: 13..110
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..24
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..110
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..24 score: 0.885
IPR023655	Cytochrome c6	HAMAP	MF_00594	Cytc_PetJ	coord: 25..109 score: 28.973

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig10	contig	L-elsbetiae_contig10:13076..13408 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig10.7.1	mRNA_L-elsbetiae_contig10.7.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig10 13076..13408 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig10.7.1 ID=prot_L-elsbetiae_contig10.7.1|Name=mRNA_L-elsbetiae_contig10.7.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp
MKNFFFGFFISCLVLISFCNPAGAVDINNGGSVFTANCSACHSGGNNVIM
PEKTLKKDALGANQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIQDVANY
VLSQSEKGWD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008168	Cyt_C_IC
IPR009056	Cyt_c-like_dom
IPR036909	Cyt_c-like_dom_sf
IPR023655	Cyt_C6