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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 852 |
| Cds size | 846 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817028.1465104-UTR-L-elsbetiae_contig9620:187..193 | 1622817028.1465104-UTR-L-elsbetiae_contig9620:187..193 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig9620 188..193 + |
| 1691683993.3586237-UTR-L-elsbetiae_contig9620:187..193 | 1691683993.3586237-UTR-L-elsbetiae_contig9620:187..193 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig9620 188..193 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817028.158884-CDS-L-elsbetiae_contig9620:193..677 | 1622817028.158884-CDS-L-elsbetiae_contig9620:193..677 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9620 194..677 + |
| 1691683993.3696315-CDS-L-elsbetiae_contig9620:193..677 | 1691683993.3696315-CDS-L-elsbetiae_contig9620:193..677 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9620 194..677 + |
| 1622817028.1708555-CDS-L-elsbetiae_contig9620:1124..1297 | 1622817028.1708555-CDS-L-elsbetiae_contig9620:1124..1297 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9620 1125..1297 + |
| 1691683993.3795078-CDS-L-elsbetiae_contig9620:1124..1297 | 1691683993.3795078-CDS-L-elsbetiae_contig9620:1124..1297 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9620 1125..1297 + |
| 1622817028.1812963-CDS-L-elsbetiae_contig9620:1935..2054 | 1622817028.1812963-CDS-L-elsbetiae_contig9620:1935..2054 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9620 1936..2054 + |
| 1691683993.3924603-CDS-L-elsbetiae_contig9620:1935..2054 | 1691683993.3924603-CDS-L-elsbetiae_contig9620:1935..2054 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9620 1936..2054 + |
| 1622817028.191429-CDS-L-elsbetiae_contig9620:2963..3033 | 1622817028.191429-CDS-L-elsbetiae_contig9620:2963..3033 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9620 2964..3033 + |
| 1691683993.4029868-CDS-L-elsbetiae_contig9620:2963..3033 | 1691683993.4029868-CDS-L-elsbetiae_contig9620:2963..3033 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9620 2964..3033 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9620.18599.1 >prot_L-elsbetiae_contig9620.18599.1 ID=prot_L-elsbetiae_contig9620.18599.1|Name=mRNA_L-elsbetiae_contig9620.18599.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=282bp
MQVPEVDATMPEVSVPAAEVAAPSANSVVPVVPALTGDVSVPEVGGSLPK
AEVPAVDAAPAASGDVPVPDVSAPSAPAVPDIPSAAVEAVASAAPDAGVP
EVEATAVDTPAVGGDVDAEVVSRGLDMPSAALDAAVVPAADVAAPAAEAP
VVDVPAVGGDVDTAVSAPAVSGEVSAPAAGCSSLPEVTADVTAVDTPAAA
VAVDTPAVEIPAVEAKTPEVSSVDASALSVDTPAAAVAVVDTPAVETPAV
EAKAPEVPPAAPVVVETPGVVVDSPAVEASAP back to topmRNA from alignment at L-elsbetiae_contig9620:188..3033+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig9620.18599.1 ID=mRNA_L-elsbetiae_contig9620.18599.1|Name=mRNA_L-elsbetiae_contig9620.18599.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2846bp|location=Sequence derived from alignment at L-elsbetiae_contig9620:188..3033+ (Laminarionema elsbetiae ELsaHSoW15)
GCTCCGATGCAGGTCCCGGAGGTCGACGCCACGATGCCCGAGGTGTCTGT
TCCCGCCGCCGAGGTCGCCGCTCCTTCGGCGAACTCTGTTGTGCCCGTCG
TCCCGGCCCTTACCGGCGACGTCTCCGTGCCCGAAGTCGGCGGCTCCCTT
CCCAAAGCGGAGGTGCCTGCCGTCGACGCCGCCCCCGCGGCGAGCGGCGA
CGTTCCCGTTCCCGACGTGAGCGCTCCGTCCGCCCCCGCCGTCCCAGACA
TTCCTTCCGCGGCAGTGGAGGCGGTAGCGTCGGCGGCCCCGGACGCGGGT
GTCCCGGAGGTCGAGGCGACCGCAGTCGACACCCCCGCCGTCGGTGGTGA
CGTTGACGCTGAGGTCGTCTCCAGGGGTTTGGACATGCCTTCCGCGGCTT
TGGACGCGGCAGTGGTGCCGGCCGCGGACGTCGCCGCCCCTGCGGCGGAG
GCGCCTGTTGTGGATGTCCCGGCCGTCGGCGGTGATGTGGGTGCTAAGGT
GGACGACGTCGTCGCCAAGTCCCCGGGTGCGCCTTCCGCTGAGGCGAGTT
GACCCCCCCCCCCCCTCCCCCCCCTCCGTTGGCTGAGGTAGCGCCATTTT
GCCGGGCGTCGGCTTCCCCTCGGTCCCGAAGCGGAAACCTGCCAACCTCT
AAGAGTTTTTCCATATCGGTGTTAAGTTATGACAAGCTATGTACGCCGCC
ACTCGGCATGCCACTTAGGTAGTCATCACCAAGAAATTATGGATACCTAT
TAGTGAATCGATCCTACAGGACTGGTTACACCGCAGACGCTTGCGCGGCA
AGCAAACAAATCTCAAAACGCTGCCGGCAACGTCCTCGTTTTCCGCCCCG
CTGCAAAAACGCAGGTCCCGGAGATCAGTGCCGCGGTGCCCGTCGTACCC
GTGTCATCCGCCGGCGACGCCAGCGTTCCCCCCGTAGACACGGCCGTGTC
CGCGCCGGCCGTGTCGGGAGAGGTCTCCGCGCCCGCAGCAGGCTGCAGCT
CGCTGCCAGAGGTGACCGCCGACGTGACGGCGGTCGACACCCCCGCCGCC
GCCGTGGCAGTGGACACGCCGGCGGTGGAAATCCCCGCCGTCGAGGCGAA
GACGCCCGAGGTGCCCTCCGTGGCTGAGGTCTCGGCGGATGTAGTAGCGA
AGGTGGACGAGGTGTCGGCAGACGCGGTGGCGAAGGTGGAGAATGTGTCG
GCGGACGTGTCGGCGAACGTGGACGAAATTGGCGCCAAGGTGGCCCCGGA
CATGCCTTCCGCGGAGGTAAGTTTTATATTATATAGCTCCCGTGCTCCCT
TTTTTTTATCGTGTCGTCGGTAGCTTTGCTGGCCTTTAAGGAGTGTCGGG
GAAGGAGGCCTCCTAAGGTGCCCTTCCTCGGAGATTTGGGTTCAGTTCTC
CCCGTTGTGCTCTTTGCTTTGTCGCCGGTGTGTTTTTTTTCAGTTCAACC
ACCCTTGATATTCGTCGGGTCTTGGCTTTCGTCGCGTACGTTTGTCCTGC
TTCGTTGAGTCTGCGATCACTACTGTGAGGCCTAAAAATCGACACCCTGG
GTTGGATTCTCGTAACCGGAGTTGCCCCCATGGTGCTCTTTGTGGGAATT
TTCTGCTGCAGAGAGCGTCCGTGTGGTGGGCGGCTTTCGCCATTGTTTGA
CTTCACTTCAATTCTTTCGACCGCCAAAGACGCAGCAGGTATCTCAAGAT
TGCCGGAAATAACATCAACTGCTTTTGTTTACGCTCGCTTTCCCGCAGGT
CTCGTCTGTTGATGCCAGCGCACTGTCTGTCGACACCCCCGCCGCCGCCG
TGGCCGTGGTTGACACGCCCGCGGTGGAAACCCCCGCCGTTGAGGCGAAG
GCGCCCGAGGTGCCGCCGTCCGTGGCGGACGTGGGAGCGAAGGTGGATGA
GGTGTCGGCGGACGTGTCGGCTAAGGTGGACAGCATTGTCGCCAAGGCGG
TGCAGGACATGCCTTCGGCGGAAGTGAGTTTTATGGAGCTCCGATAACTG
CCTGGTGTTCTTCGCCGCGGCGACTTATTTGATGTGTCCATTTCACATGT
ATTAAGTTATGGTGAATGTCGCAGCTTTCCAGAGAGGCACCCAAAACCCC
ACTTTGTTAATGCGTTTGCATCCCACATCCGGAAAGGGACCACTGAACCC
CCCCCTTGCTTTACAATACAAGGGGGTATACCAGTTGAGGCGTTCCCTCC
TCGATTTGTTCAAACATGCAACAGTTTTATTCCGAGAAGTGCGGACCTGT
GTCTAGAACATACGGGAGTGAATGCAATCGATATTGCTGCTGATGTTGTG
ATTTTATCCCCGCCCCGGTGAATGCAACGGATTTCGCCGATGATTTTGTA
ATTTTCTTTCCGCCGGGCTTTGCCTGACTCGTTCCCCGATTGCTGGGAGA
GGGGAAAGTCGACCGTACGTTGGACAAAGGAAATTCGCAATCAAGACGTG
TGAAAAGAGTATCGTGTCTCCCAACGCTTCGAGCCTCGGGTCCCCGCAGA
AAGTCAGCACTGTGTTGCCTGATGCTCACGTTTTACGCCCGCAAAGGACT
CCCAGACCCAACCCAGCGGTTTTCTGACAGATTACCGCAAAAACGCTCCG
TTCTTCTTGCTCTGTTCTCGCTCGCCCGCAGGTCTCCTCTGTCGATCCCA
GCGCCCCTTCTTCTGTCGCTCTTGAGACACCCGCTGTCGTTGTCGACACC
CCGGCTATTGAGGCCCCGGCACCCGCCGCCGTTTAAACGCCCGTTTTTTT
GTTGTTCTCCCGCAGGTCGACGCCAGCGCCGCGCCGGTCGTTGTCGAGAC
ACCCGGTGTCGTTGTCGACAGCCCGGCTGTTGAGGCCTCGGCACCC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig9620:188..3033+ >mRNA_L-elsbetiae_contig9620.18599.1 ID=mRNA_L-elsbetiae_contig9620.18599.1|Name=mRNA_L-elsbetiae_contig9620.18599.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1692bp|location=Sequence derived from alignment at L-elsbetiae_contig9620:188..3033+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGGTCCCGGAGGTCGACGCCACGATGCCCGAGGTGTCTGTTCCCGC
CGCCGAGGTCGCCGCTCCTTCGGCGAACTCTGTTGTGCCCGTCGTCCCGG
CCCTTACCGGCGACGTCTCCGTGCCCGAAGTCGGCGGCTCCCTTCCCAAA
GCGGAGGTGCCTGCCGTCGACGCCGCCCCCGCGGCGAGCGGCGACGTTCC
CGTTCCCGACGTGAGCGCTCCGTCCGCCCCCGCCGTCCCAGACATTCCTT
CCGCGGCAGTGGAGGCGGTAGCGTCGGCGGCCCCGGACGCGGGTGTCCCG
GAGGTCGAGGCGACCGCAGTCGACACCCCCGCCGTCGGTGGTGACGTTGA
CGCTGAGGTCGTCTCCAGGGGTTTGGACATGCCTTCCGCGGCTTTGGACG
CGGCAGTGGTGCCGGCCGCGGACGTCGCCGCCCCTGCGGCGGAGGCGCCT
GTTGTGGATGTCCCGGCCGTCGGCGGTGATGTGGATGCAGGTCCCGGAGG
TCGACGCCACGATGCCCGAGGTGTCTGTTCCCGCCGCCGAGGTCGCCGCT
CCTTCGGCGAACTCTGTTGTGCCCGTCGTCCCGGCCCTTACCGGCGACGT
CTCCGTGCCCGAAGTCGGCGGCTCCCTTCCCAAAGCGGAGGTGCCTGCCG
TCGACGCCGCCCCCGCGGCGAGCGGCGACGTTCCCGTTCCCGACGTGAGC
GCTCCGTCCGCCCCCGCCGTCCCAGACATTCCTTCCGCGGCAGTGGAGGC
GGTAGCGTCGGCGGCCCCGGACGCGGGTGTCCCGGAGGTCGAGGCGACCG
CAGTCGACACCCCCGCCGTCGGTGGTGACGTTGACGCTGAGGTCGTCTCC
AGGGGTTTGGACATGCCTTCCGCGGCTTTGGACGCGGCAGTGGTGCCGGC
CGCGGACGTCGCCGCCCCTGCGGCGGAGGCGCCTGTTGTGGATGTCCCGG
CCGTCGGCGGTGATGTGGACACGGCCGTGTCCGCGCCGGCCGTGTCGGGA
GAGGTCTCCGCGCCCGCAGCAGGCTGCAGCTCGCTGCCAGAGGTGACCGC
CGACGTGACGGCGGTCGACACCCCCGCCGCCGCCGTGGCAGTGGACACGC
CGGCGGTGGAAATCCCCGCCGTCGAGGCGAAGACGCCCGAGACACGGCCG
TGTCCGCGCCGGCCGTGTCGGGAGAGGTCTCCGCGCCCGCAGCAGGCTGC
AGCTCGCTGCCAGAGGTGACCGCCGACGTGACGGCGGTCGACACCCCCGC
CGCCGCCGTGGCAGTGGACACGCCGGCGGTGGAAATCCCCGCCGTCGAGG
CGAAGACGCCCGAGGTCTCGTCTGTTGATGCCAGCGCACTGTCTGTCGAC
ACCCCCGCCGCCGCCGTGGCCGTGGTTGACACGCCCGCGGTGGAAACCCC
CGCCGTTGAGGCGAAGGCGCCCGAGGTGCCGCCGTCTCGTCTGTTGATGC
CAGCGCACTGTCTGTCGACACCCCCGCCGCCGCCGTGGCCGTGGTTGACA
CGCCCGCGGTGGAAACCCCCGCCGTTGAGGCGAAGGCGCCCGAGGTGCCG
CCCGCCGCGCCGGTCGTTGTCGAGACACCCGGTGTCGTTGTCGACAGCCC
GGCTGTTGAGGCCTCGGCACCCCGCCGCGCCGGTCGTTGTCGAGACACCC
GGTGTCGTTGTCGACAGCCCGGCTGTTGAGGCCTCGGCACCC back to top
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