mRNA_L-elsbetiae_contig9585.18561.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9585.18561.1 vs. uniprot
Match: D7FM94_ECTSI (P-type ATPase (PMID 12707717) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM94_ECTSI) HSP 1 Score: 129 bits (324), Expect = 5.770e-38 Identity = 60/68 (88.24%), Postives = 65/68 (95.59%), Query Frame = 1 Query: 1 MSFASSYLFYKSVSWAVPLFLYAFWNGLSGQVFYDWVNSTLWALMYTGLPIVLLGIYDMDVSPSTALR 204 MSFA+SYLFYKSVSWAVPLF+YAF+NGLSGQ FYDWVNS LWAL+YTGLPIVLLG+YDMDV PSTALR Sbjct: 1 MSFATSYLFYKSVSWAVPLFVYAFFNGLSGQFFYDWVNSMLWALLYTGLPIVLLGVYDMDVLPSTALR 68
BLAST of mRNA_L-elsbetiae_contig9585.18561.1 vs. uniprot
Match: A0A7S4DCU9_HETAK (Phospholipid-transporting ATPase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCU9_HETAK) HSP 1 Score: 65.5 bits (158), Expect = 8.040e-11 Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 1 Query: 1 MSFASSYLFYKSVSWAVPLFLYAFWNGLSGQVFYDWVNSTLWALMYTGLPIVLLGIYDMDVSPSTALR 204 MS Y+FYK++ ++P+F +AF G GQ FY V + L YT LPI+L+GIYD D+S ALR Sbjct: 302 MSKLVCYVFYKNILMSLPMFWFAFAAGFGGQKFYVEVGIQFYNLFYTSLPIILIGIYDRDISADLALR 369
BLAST of mRNA_L-elsbetiae_contig9585.18561.1 vs. uniprot
Match: A0A7S3LVN7_9EUKA (Phospholipid-transporting ATPase n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LVN7_9EUKA) HSP 1 Score: 63.5 bits (153), Expect = 3.880e-10 Identity = 29/65 (44.62%), Postives = 44/65 (67.69%), Query Frame = 1 Query: 10 ASSYLFYKSVSWAVPLFLYAFWNGLSGQVFYDWVNSTLWALMYTGLPIVLLGIYDMDVSPSTALR 204 A +Y+FYK+V + LFL+ F+NG SG Y+ + S + +++T LP+++LGI D DVSP AL Sbjct: 520 AINYIFYKNVMNTLVLFLFCFFNGFSGSSLYESLTSAAYNVVWTSLPVIVLGIIDKDVSPKHALE 584
BLAST of mRNA_L-elsbetiae_contig9585.18561.1 vs. uniprot
Match: UPI000854440D (phospholipid-transporting ATPase IC-like n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854440D) HSP 1 Score: 62.0 bits (149), Expect = 1.360e-9 Identity = 27/63 (42.86%), Postives = 43/63 (68.25%), Query Frame = 1 Query: 16 SYLFYKSVSWAVPLFLYAFWNGLSGQVFYDWVNSTLWALMYTGLPIVLLGIYDMDVSPSTALR 204 SY FYK+ ++ + F YAF+ G SGQ YD V TL+ L+Y+ LP++++G+ D DVS +++ Sbjct: 948 SYFFYKNFAYTLVHFWYAFFCGFSGQTVYDTVFMTLYNLLYSSLPVIIVGLQDQDVSDKVSMQ 1010
BLAST of mRNA_L-elsbetiae_contig9585.18561.1 vs. uniprot
Match: A0A0L0H983_SPIPD (Phospholipid-transporting ATPase n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0H983_SPIPD) HSP 1 Score: 60.8 bits (146), Expect = 3.490e-9 Identity = 24/59 (40.68%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 25 FYKSVSWAVPLFLYAFWNGLSGQVFYDWVNSTLWALMYTGLPIVLLGIYDMDVSPSTAL 201 F K+V W + LF Y F+ G S Q YD+ + L+ +++TGLP++++G++D D+SP + L Sbjct: 965 FVKNVVWVMVLFWYQFYAGFSAQSVYDFTYTLLYNIVFTGLPVIMIGVFDQDLSPRSIL 1023
BLAST of mRNA_L-elsbetiae_contig9585.18561.1 vs. uniprot
Match: A0A821B8Q9_9NEOB (Phospholipid-transporting ATPase (Fragment) n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821B8Q9_9NEOB) HSP 1 Score: 60.5 bits (145), Expect = 4.720e-9 Identity = 26/63 (41.27%), Postives = 42/63 (66.67%), Query Frame = 1 Query: 16 SYLFYKSVSWAVPLFLYAFWNGLSGQVFYDWVNSTLWALMYTGLPIVLLGIYDMDVSPSTALR 204 SY FYK+ ++ + F Y+F+NG SGQ YD V L+ L+Y+ LPI+++G+ D DV +++ Sbjct: 583 SYFFYKNFAYTLVHFWYSFFNGFSGQTVYDTVFIALYNLLYSSLPIIIVGLQDQDVGDKLSMQ 645
BLAST of mRNA_L-elsbetiae_contig9585.18561.1 vs. uniprot
Match: UPI001ABE5FBE (phospholipid-transporting ATPase IC n=1 Tax=Bufo bufo TaxID=8384 RepID=UPI001ABE5FBE) HSP 1 Score: 60.5 bits (145), Expect = 4.760e-9 Identity = 26/63 (41.27%), Postives = 42/63 (66.67%), Query Frame = 1 Query: 16 SYLFYKSVSWAVPLFLYAFWNGLSGQVFYDWVNSTLWALMYTGLPIVLLGIYDMDVSPSTALR 204 +Y FYK+ ++ + F YAF+NG SGQ YD V L+ L+Y+ LPI+++G+ D DV +++ Sbjct: 943 TYFFYKNFAYTLVHFWYAFFNGFSGQTVYDTVFMALYNLLYSSLPIIVVGLQDQDVGDKLSMQ 1005
BLAST of mRNA_L-elsbetiae_contig9585.18561.1 vs. uniprot
Match: A0A2T7C6T6_9POAL (Phospholipid-transporting ATPase n=27 Tax=Panicoideae TaxID=147369 RepID=A0A2T7C6T6_9POAL) HSP 1 Score: 60.1 bits (144), Expect = 6.510e-9 Identity = 25/63 (39.68%), Postives = 44/63 (69.84%), Query Frame = 1 Query: 16 SYLFYKSVSWAVPLFLYAFWNGLSGQVFYDWVNSTLWALMYTGLPIVLLGIYDMDVSPSTALR 204 +Y FYK++++ + F + F G SGQ FYD N +L+ +++T LP++++G++D DVS S + R Sbjct: 933 TYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWNQSLYNVIFTALPVIIVGLFDKDVSASLSKR 995
BLAST of mRNA_L-elsbetiae_contig9585.18561.1 vs. uniprot
Match: F0WPS0_9STRA (Phospholipid-transporting ATPase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WPS0_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.220e-8 Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 1 Query: 1 MSFASSYLFYKSVSWAVPLFLYAFWNGLSGQVFYDWVNSTLWALMYTGLPIVLLGIYDMDV 183 MS Y+FYK++ + F Y F++G SGQ FY L+ MYT LPI++LG++DMDV Sbjct: 959 MSVLVGYMFYKNILMVLAQFYYTFYSGASGQKFYSEFYFQLYNAMYTTLPILVLGVFDMDV 1019
BLAST of mRNA_L-elsbetiae_contig9585.18561.1 vs. uniprot
Match: A0A024GGU9_9STRA (Phospholipid-transporting ATPase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GGU9_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.220e-8 Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 1 Query: 1 MSFASSYLFYKSVSWAVPLFLYAFWNGLSGQVFYDWVNSTLWALMYTGLPIVLLGIYDMDV 183 MS Y+FYK++ + F Y F++G SGQ FY L+ MYT LPI++LG++DMDV Sbjct: 961 MSVLVGYMFYKNILMVLAQFYYTFYSGASGQKFYSEFYFQLYNAMYTTLPILVLGVFDMDV 1021 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9585.18561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9585.18561.1 >prot_L-elsbetiae_contig9585.18561.1 ID=prot_L-elsbetiae_contig9585.18561.1|Name=mRNA_L-elsbetiae_contig9585.18561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=68bp MSFASSYLFYKSVSWAVPLFLYAFWNGLSGQVFYDWVNSTLWALMYTGLPback to top mRNA from alignment at L-elsbetiae_contig9585:6185..6982+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9585.18561.1 ID=mRNA_L-elsbetiae_contig9585.18561.1|Name=mRNA_L-elsbetiae_contig9585.18561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=798bp|location=Sequence derived from alignment at L-elsbetiae_contig9585:6185..6982+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9585:6185..6982+ >mRNA_L-elsbetiae_contig9585.18561.1 ID=mRNA_L-elsbetiae_contig9585.18561.1|Name=mRNA_L-elsbetiae_contig9585.18561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=408bp|location=Sequence derived from alignment at L-elsbetiae_contig9585:6185..6982+ (Laminarionema elsbetiae ELsaHSoW15)back to top |