mRNA_L-elsbetiae_contig9583.18560.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9583.18560.1
Unique NamemRNA_L-elsbetiae_contig9583.18560.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9583.18560.1 vs. uniprot
Match: A0A6H5J6T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6T9_9PHAE)

HSP 1 Score: 700 bits (1806), Expect = 2.030e-246
Identity = 333/436 (76.38%), Postives = 368/436 (84.40%), Query Frame = 1 
Query:    1 SRNHVDGMGFYTNADGDRGGTNLHFNKPYLIRKWLPHYDWVLWLDMDALIVDIAKPIESFIEEVGGQDGGIHVLVPQDQNVQFFFSACSLLLRNSPESMEMVEDWFALKDTCPYAMYDDQSRLYAAVLRMQLR-------------------------------CFDAAVRALGIRRVPQLFPPVAYSRLPTRSYRGSFTKGTDTGLVFQGQFGGIKEHPHLVEYAFSVHTKPYCQKSFQICSPFVDAILAPNYQKGMQRCYGQGWLAKPYKALSSLHLGAKSGPAADSETLSVHVQNTSSMEAMVPGLNLPYGIEFTGIRQGVVGAGGKPDSGPGWREMGRNNDKKFCFASLPGGGGKEFMGQVLGPLLLQRFCALSSCDGINVLKAKQRADKEQIPCKIARVYQVFPYNLMSDYAANSRQPSWHMSMIRDPVDR 1215
            SRNHV+GMGFYT+ +G RGGTN+HFNKPYLIRKWLPHYDWVLWLDMDAL+VD+AKPIE FIEEVGGQDG IHVLVPQDQNVQFFFSACSLLLRNSPE+MEMVEDWFALKDTCPYAMYDDQSRLYAA+LRMQLR                               CFD+AVRA+GI RVP+L+PPVAYSRLPTR     FTKGTDTGLVFQGQFGGIK HPHLVE+AFSVHTKP+CQKSFQICSPFVDAILAPNYQKGMQRCYG+GW+AKPY AL++LH GAKSGPA DSE L VHV+NTSS+EA+VPGLN+P+GI+FTG+R+     GG    GPGWR+MG   DK+FCFASLPG GG+EFM QVLGPLLLQRFC L SCDGI+++KA +RA +EQ PCKIA+VYQVFPYNLMSDYA NSRQP WHMSMIRDPVDR
Sbjct:  154 SRNHVNGMGFYTDENGHRGGTNVHFNKPYLIRKWLPHYDWVLWLDMDALVVDLAKPIEKFIEEVGGQDGDIHVLVPQDQNVQFFFSACSLLLRNSPETMEMVEDWFALKDTCPYAMYDDQSRLYAAILRMQLRWRGQEVDRSDYATTDCLDMCEKKETQGEFSWCFDSAVRAMGIDRVPKLYPPVAYSRLPTRM----FTKGTDTGLVFQGQFGGIKTHPHLVEHAFSVHTKPFCQKSFQICSPFVDAILAPNYQKGMQRCYGRGWVAKPYMALATLHEGAKSGPAVDSEVLGVHVKNTSSVEALVPGLNVPFGIQFTGMRESQHAKGGGGGRGPGWRQMGTKEDKRFCFASLPGAGGREFMRQVLGPLLLQRFCTLGSCDGISLIKATRRAHREQTPCKIAKVYQVFPYNLMSDYATNSRQPFWHMSMIRDPVDR 585
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BLAST of mRNA_L-elsbetiae_contig9583.18560.1 vs. uniprot
Match: D8LGK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGK9_ECTSI)

HSP 1 Score: 678 bits (1749), Expect = 9.840e-242
Identity = 320/411 (77.86%), Postives = 353/411 (85.89%), Query Frame = 1 
Query:    1 SRNHVDGMGFYTNADGDRGGTNLHFNKPYLIRKWLPHYDWVLWLDMDALIVDIAKPIESFIEEVGGQDGGIHVLVPQDQNVQFFFSACSLLLRNSPESMEMVEDWFALKDTCPYAMYDDQSRLYAAVLRMQLRCFDAAVRALGIRRVPQLFPPVAYSRLPTRSYRGSFTKGTDTGLVFQGQFGGIKEHPHLVEYAFSVHTKPYCQKSFQICSPFVDAILAPNYQKGMQRCYGQGWLAKPYKALSSLHLGAKSGPAADSETLSVHVQNTSSMEAMVPGLNLPYGIEFTGIRQGVVGAGGK------PDSGPGWREMGRNNDKKFCFASLPGGGGKEFMGQVLGPLLLQRFCALSSCDGINVLKAKQRADKEQIPCKIARVYQVFPYNLMSDYAANSRQPSWHMSMIRDPVDR 1215
            SRNHV+GMGFYT+ +G RGGTN+HFNKPYLIRKWLPHYDWVLWLDMDAL+VD+AKPIE FIEEVGGQDG IHVLVPQDQNVQFFFSACSLLLRNSPE+M+MVEDWF LKDTCPYAMYDDQSRLYAA+LRMQLRC D+A    GI RV +LFPP   SRLP    R  F KG D G VFQGQFGGIK HPHLVE+AFSVHTKP+CQKSFQICSPFVDAILAPNYQKGMQRCYGQGW+AKPY AL++LH GAKSGPA D+E L VHV+N SS+EA+VPGLN+PYGI+FTG+R+     GG+         GPGWR+MG   DK+FC ASLPG GG+EFMGQVLGPLLLQRFC L SCDGI++ KAK+RA +EQ PCKIA+VYQVFPYNLMSDYA NSRQP WHMSMIRDPVDR
Sbjct:  150 SRNHVNGMGFYTDENGHRGGTNVHFNKPYLIRKWLPHYDWVLWLDMDALVVDLAKPIEKFIEEVGGQDGDIHVLVPQDQNVQFFFSACSLLLRNSPETMDMVEDWFTLKDTCPYAMYDDQSRLYAAILRMQLRCLDSAGGGRGINRVRKLFPPGGSSRLP----RKMFPKGPDPGWVFQGQFGGIKTHPHLVEHAFSVHTKPFCQKSFQICSPFVDAILAPNYQKGMQRCYGQGWVAKPYMALATLHEGAKSGPAVDNEALGVHVKNASSVEALVPGLNVPYGIQFTGMRESQQANGGRGXXXXXXXXGPGWRQMGTKEDKRFCLASLPGAGGREFMGQVLGPLLLQRFCTLGSCDGISLSKAKRRAHREQTPCKIAKVYQVFPYNLMSDYARNSRQPFWHMSMIRDPVDR 556
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BLAST of mRNA_L-elsbetiae_contig9583.18560.1 vs. uniprot
Match: A0A836C727_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C727_9STRA)

HSP 1 Score: 345 bits (884), Expect = 5.630e-106
Identity = 212/521 (40.69%), Postives = 263/521 (50.48%), Query Frame = 1 
Query:    1 SRNHVDGMGFYTNAD-GDRGGTNLHFNKPYLIRKWLPHYDWVLWLDMDALIVDIA--------------------------------------------------KPIESFIEEVGGQDGGIHVLVPQDQNVQFFFSACSLLLRNSPESMEMVEDWFALKDTCPYAMYDDQSRLYAAVLRMQLR-------------------------------CFDAAVRALGIRRVPQLFPPVAYSRLPTRSYRGSFTKGTDTGLVFQGQFGGIKEHPHLVEYAFSVHTKPYCQKSFQICSPFVDAILAPNYQKGMQRCYGQG-WLAKPYKALSSLHLGAKSGPAADSETLSVHVQNTSSMEAMVPGLNLPYGIEFTGIRQGV-----VGAGGKPDSGP--GWREMGRNNDKKFCFASL--------------------------PGGGGKEFMGQVLGPLLLQRFCALSSCDGINVLKAKQRADKEQIPCKIARVYQVFPYNLMSDYAANSRQPSWHMSMIRDPVDR 1215
            SRNHV+GMGFY NAD G+RG TN+HFNKPYLIRKWLP YDWVLWLD+D+++ D++                                                  + IE+FIE +      +H+LVPQDQN   FFSA +LL+RNS ES  MV+DWF LKD+CP+AMYDDQSRLYAA+LRMQLR                               CFD A++  GI R+P    PVA+S LP   +R    KG DTGL  QG FGGIK  P LV  AF+VH KP C K    C+PF+D ++   Y++GM RCYG G WLA P  AL++L    K GP AD+E         S  EA VP LN P+ + F+ +  G+     V A  K    P  GWR  G + D K CFA+                           P  GG+ F   +L P L Q  CA S   G  VL          + C ++RV Q FPY L ++Y    R   W M+ +RDPVDR
Sbjct:  322 SRNHVEGMGFYVNADTGERGPTNVHFNKPYLIRKWLPRYDWVLWLDLDSMVTDMSSMYVFKTFAIVQPCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRIETFIERLNHH---VHILVPQDQNTVMFFSAYALLIRNSEESRVMVDDWFKLKDSCPFAMYDDQSRLYAALLRMQLRAANVTVDRSRGRTSDCLDVCERKETQKTFSWCFDRAIKRQGIWRLPDQKGPVAFSTLPKEDFR----KGNDTGLAMQGMFGGIKFRPELVHEAFAVHVKPVCLKGAVTCAPFLDILIGEKYRQGMARCYGSGGWLADPVPALTALANRPK-GPDADNEA------ELSKTEA-VPALNAPFAVPFS-VADGMSAAAAVTAAAKGPQVPQHGWRAFGADKDSKVCFAATWPYIDSLKIRMELSCRVLLQVCFAAPPAAGGEVFASLILEPTLEQLTCARSGNCGARVLGEAALDGTRHVTCLMSRVGQHFPYVLTNEYRWKFRYTGWTMTWLRDPVDR 826
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BLAST of mRNA_L-elsbetiae_contig9583.18560.1 vs. uniprot
Match: A0A835Z9A1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A1_9STRA)

HSP 1 Score: 105 bits (261), Expect = 7.180e-21
Identity = 89/291 (30.58%), Postives = 127/291 (43.64%), Query Frame = 1 
Query:  166 PIESFIEEVGGQDGGIHVLVPQDQNVQFFFSACSLLLRNSPESMEMVEDWFALKDTCPYAMYDDQSRLYAAVLRMQLRCFDAAVRALGIRRVPQLFPPVAYSR-------LPTRSYRGSFTKGTDTGLVFQGQFGGIKEHPHLVEYAFSVHTKPYCQKSFQICSPFVDAILAPNYQKGMQRCYGQGWLAKPYKALSSLHLGAKSGPAADSETLSVHVQNTSSMEAMVPGLNLPYGIEFTGIRQGVVGAGGKPDSGPGWREMGRNNDKKFCFASLPGGGGKEFMGQVLGPLL 1017
            PIE FI+ +G     I +L+PQ++     FSA  +L+RNS  + +M++DW++L+D CP+ ++DDQ R+    +R     +      L  +   Q  P  A +        L     R  F    DTGL F  QFG     P L+E  F  H KP     F      V A+L P Y KGM +C     ++     L  +      G AAD E L +      +    VP LNL    +FT            P     + + G  +  + CFA++PG  G  F GQ L P L
Sbjct:    9 PIEDFIDALGDD---IQLLIPQEEEESHNFSAFIVLMRNSQATRDMLDDWWSLRDQCPFLLWDDQGRMRGQAVR---HGWPGTTDCLESQFCNQPHPGGAEANWYDFVVCLEIDYSRPDFWGDGDTGLGFNAQFGIADYLPRLMEKPFIAHFKPTYDPWFLQWQHAV-AVLLPGYMKGMAQC-PSAVVSDHLPVLQEVANTELWGAAADDEVLMM------TRGEPVPALNL----DFTA-----------PLGTHTFWQFGTESSHEACFAAVPGSMGTVFAGQELEPAL 270
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BLAST of mRNA_L-elsbetiae_contig9583.18560.1 vs. uniprot
Match: A0A7S4CG71_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CG71_9EUGL)

HSP 1 Score: 77.4 bits (189), Expect = 2.140e-13
Identity = 39/119 (32.77%), Postives = 62/119 (52.10%), Query Frame = 1 
Query:   79 KPYLIRKWLPHYDWVLWLDMDALIVDIAKPIESFIEEVGGQDGGIHVLVPQDQNVQFFFSACSLLLRNSPESMEMVEDWFALKDTCPYAMYDDQSRLYAAVLRMQLRCFDAAVRALGIR 435
            K +++R+WLPHYDW+ W D+DA I      +ESF+          H+LVPQD   +  FS  + LL+NSP     ++ W+  +  CP   + DQ  ++ A+  +     +A+  A   R
Sbjct:   36 KVHMLRRWLPHYDWLFWTDLDATIFAPQTRVESFL----ALQHSAHLLVPQDSMQRLVFSNDAFLLKNSPWGRRFLDRWWEYRRLCPNT-HADQGAMWLAIADLMAPPGNASACAADCR 149
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BLAST of mRNA_L-elsbetiae_contig9583.18560.1 vs. uniprot
Match: A0A7R9WX77_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WX77_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.130e-6
Identity = 25/81 (30.86%), Postives = 51/81 (62.96%), Query Frame = 1 
Query:   73 FNKPYLIRKWLPHYDWVLWLDMDALIVDIAKPIESFIEEVGGQDGGIHVLVPQDQNVQFFFSACSLLLRNSPESMEMVEDW 315
            +N+   ++  L +YDW+++ D+D +I D+++P+ESF+ E    +    + VP D     FF++ ++L++NS  S  ++E+W
Sbjct:   62 WNRVPHLQSQLTNYDWMMYADLDHVIRDLSRPLESFLNEFRVYNQTPSIFVPTDLTAGTFFASYAVLIKNSTFSHRVLENW 142
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BLAST of mRNA_L-elsbetiae_contig9583.18560.1 vs. uniprot
Match: A0A7S1L933_NEODS (Hypothetical protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1L933_NEODS)

HSP 1 Score: 57.0 bits (136), Expect = 8.600e-6
Identity = 24/74 (32.43%), Postives = 42/74 (56.76%), Query Frame = 1 
Query:   58 GTNLHFNKPYLIRKWLPHYDWVLWLDMDALIVDIAKPIESFIEEVGGQDGGIHVLVPQDQNVQFFFSACSLLLR 279
            G   H+ K   + +WLPHYDWV WLD DA+I ++++P+   ++     +     L+ ++Q V  + +  S L+R
Sbjct:  119 GRTAHWAKITALARWLPHYDWVWWLDADAVITNLSRPVTDVVDRYARGNDAAGFLIAREQ-VTGYLNTGSFLIR 191
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BLAST of mRNA_L-elsbetiae_contig9583.18560.1 vs. uniprot
Match: UPI001FC85041 (hypothetical protein n=1 Tax=Paraburkholderia phenazinium TaxID=60549 RepID=UPI001FC85041)

HSP 1 Score: 57.8 bits (138), Expect = 1.730e-5
Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = 1 
Query:   79 KPYLIRKWLPHYDWVLWLDMDALIVDIAKPIESFIEEVGGQDGGIHVLVPQDQNVQFFFSACSLLLRNSPESMEMVEDWFALKDTCP-----YAMYDDQSRLYAAVLRMQLRC-FDAAVRALGI 432
            KP+L+RK+LPH++WVLW+D D L ++ A  +E  +E  G +    H + P      +  +A  L LR S  + E+VE         P     YA   DQ+ + A +L+ QL    DA +  +G+
Sbjct:  250 KPWLLRKYLPHHEWVLWIDSDILFINHAMKLEPLLE--GREIVAAHDIGP------WIINAGVLGLRRSSRNFELVEHILESIRAVPDRSSTYASGGDQT-VIADILKSQLGWDLDAGMSLVGL 364
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BLAST of mRNA_L-elsbetiae_contig9583.18560.1 vs. uniprot
Match: A0A7S1Q9I0_NEODS (Hypothetical protein (Fragment) n=2 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1Q9I0_NEODS)

HSP 1 Score: 55.5 bits (132), Expect = 5.940e-5
Identity = 30/87 (34.48%), Postives = 49/87 (56.32%), Query Frame = 1 
Query:   58 GTNLHFNKPYLIRKWLPHYDWVLWLDMDALIVDIAKPIESFIEE----VGGQDG-GIHVLVPQDQNVQFFFSACSLLLRNSPESMEM 303
            G   H+NK   + +WLP YDWV+W+D DAL ++ +  +ES I+     V G DG G  +++ +D +   F +   ++LR   +S  M
Sbjct:  108 GRTGHWNKLVALARWLPRYDWVMWIDADALFLNQSIALESVIKNATDGVAGPDGLGPRLILARDYD---FLNTGVMILRGGEQSDAM 191
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9583.18560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5J6T9_9PHAE2.030e-24676.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGK9_ECTSI9.840e-24277.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C727_9STRA5.630e-10640.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9A1_9STRA7.180e-2130.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4CG71_9EUGL2.140e-1332.77Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7R9WX77_9STRA4.130e-630.86Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S1L933_NEODS8.600e-632.43Hypothetical protein (Fragment) n=1 Tax=Neobodo de... [more]
UPI001FC850411.730e-533.06hypothetical protein n=1 Tax=Paraburkholderia phen... [more]
A0A7S1Q9I0_NEODS5.940e-534.48Hypothetical protein (Fragment) n=2 Tax=Neobodo de... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9583contigL-elsbetiae_contig9583:1258..7435 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGalactosyl transferase
Ec32 orthologEc-10_001650.1
Exons9
Model size1215
Cds size1194
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9583.18560.1prot_L-elsbetiae_contig9583.18560.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9583 1258..7414 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817024.3001196-CDS-L-elsbetiae_contig9583:1257..14041622817024.3001196-CDS-L-elsbetiae_contig9583:1257..1404Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 1258..1404 -
1691683990.6453795-CDS-L-elsbetiae_contig9583:1257..14041691683990.6453795-CDS-L-elsbetiae_contig9583:1257..1404Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 1258..1404 -
1622817024.3149066-CDS-L-elsbetiae_contig9583:2678..27471622817024.3149066-CDS-L-elsbetiae_contig9583:2678..2747Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 2679..2747 -
1691683990.6573737-CDS-L-elsbetiae_contig9583:2678..27471691683990.6573737-CDS-L-elsbetiae_contig9583:2678..2747Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 2679..2747 -
1622817024.32676-CDS-L-elsbetiae_contig9583:3281..34741622817024.32676-CDS-L-elsbetiae_contig9583:3281..3474Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 3282..3474 -
1691683990.6695857-CDS-L-elsbetiae_contig9583:3281..34741691683990.6695857-CDS-L-elsbetiae_contig9583:3281..3474Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 3282..3474 -
1622817024.339839-CDS-L-elsbetiae_contig9583:3788..39081622817024.339839-CDS-L-elsbetiae_contig9583:3788..3908Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 3789..3908 -
1691683990.6787527-CDS-L-elsbetiae_contig9583:3788..39081691683990.6787527-CDS-L-elsbetiae_contig9583:3788..3908Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 3789..3908 -
1622817024.3510313-CDS-L-elsbetiae_contig9583:4541..46901622817024.3510313-CDS-L-elsbetiae_contig9583:4541..4690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 4542..4690 -
1691683990.6905541-CDS-L-elsbetiae_contig9583:4541..46901691683990.6905541-CDS-L-elsbetiae_contig9583:4541..4690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 4542..4690 -
1622817024.3620875-CDS-L-elsbetiae_contig9583:5084..52231622817024.3620875-CDS-L-elsbetiae_contig9583:5084..5223Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 5085..5223 -
1691683990.7025177-CDS-L-elsbetiae_contig9583:5084..52231691683990.7025177-CDS-L-elsbetiae_contig9583:5084..5223Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 5085..5223 -
1622817024.3722737-CDS-L-elsbetiae_contig9583:5968..60631622817024.3722737-CDS-L-elsbetiae_contig9583:5968..6063Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 5969..6063 -
1691683990.719352-CDS-L-elsbetiae_contig9583:5968..60631691683990.719352-CDS-L-elsbetiae_contig9583:5968..6063Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 5969..6063 -
1622817024.3833737-CDS-L-elsbetiae_contig9583:6617..67191622817024.3833737-CDS-L-elsbetiae_contig9583:6617..6719Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 6618..6719 -
1691683990.7308912-CDS-L-elsbetiae_contig9583:6617..67191691683990.7308912-CDS-L-elsbetiae_contig9583:6617..6719Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 6618..6719 -
1622817024.3941884-CDS-L-elsbetiae_contig9583:7234..74141622817024.3941884-CDS-L-elsbetiae_contig9583:7234..7414Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 7235..7414 -
1691683990.7404668-CDS-L-elsbetiae_contig9583:7234..74141691683990.7404668-CDS-L-elsbetiae_contig9583:7234..7414Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9583 7235..7414 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817024.4086285-UTR-L-elsbetiae_contig9583:7414..74351622817024.4086285-UTR-L-elsbetiae_contig9583:7414..7435Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9583 7415..7435 -
1691683990.7521493-UTR-L-elsbetiae_contig9583:7414..74351691683990.7521493-UTR-L-elsbetiae_contig9583:7414..7435Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9583 7415..7435 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9583.18560.1

>prot_L-elsbetiae_contig9583.18560.1 ID=prot_L-elsbetiae_contig9583.18560.1|Name=mRNA_L-elsbetiae_contig9583.18560.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=398bp
MGFYTNADGDRGGTNLHFNKPYLIRKWLPHYDWVLWLDMDALIVDIAKPI
ESFIEEVGGQDGGIHVLVPQDQNVQFFFSACSLLLRNSPESMEMVEDWFA
LKDTCPYAMYDDQSRLYAAVLRMQLRCFDAAVRALGIRRVPQLFPPVAYS
RLPTRSYRGSFTKGTDTGLVFQGQFGGIKEHPHLVEYAFSVHTKPYCQKS
FQICSPFVDAILAPNYQKGMQRCYGQGWLAKPYKALSSLHLGAKSGPAAD
SETLSVHVQNTSSMEAMVPGLNLPYGIEFTGIRQGVVGAGGKPDSGPGWR
EMGRNNDKKFCFASLPGGGGKEFMGQVLGPLLLQRFCALSSCDGINVLKA
KQRADKEQIPCKIARVYQVFPYNLMSDYAANSRQPSWHMSMIRDPVDR
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mRNA from alignment at L-elsbetiae_contig9583:1258..7435-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9583.18560.1 ID=mRNA_L-elsbetiae_contig9583.18560.1|Name=mRNA_L-elsbetiae_contig9583.18560.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6178bp|location=Sequence derived from alignment at L-elsbetiae_contig9583:1258..7435- (Laminarionema elsbetiae ELsaHSoW15)
TCCAGGAATCACGTGGACGGGATGGGTTTCTACACGAACGCGGACGGGGA
CAGGGGAGGCACAAACCTCCACTTCAACAAGCCCTACCTCATCCGCAAGT
GGCTGCCGCACTACGACTGGGTGCTGTGGCTGGACATGGATGCTCTCATC
GTCGATATCGCGAAACCGATCGAGAGTTTCATTGAAGAGGTTGGGGGCCA
GGTATGTAAAAGCGAGCGCCTTTTTCGGGGGACGTATCGTTTCGACGAGG
TTGGGGGGGGAGCCCAGGGGGGGCAGGTGAATGAATCGCCTACACGAGGT
ATCGTTCCGAGGCGGCGTGGCTCCTTGCCCTCGCCTCTTGTCTTAGTAAC
TAAATCTCGTGTTGACGTTGAAGCTGGGTATGCTGCCCGCTACTGGACAG
ACCCGGGCGGGGATATGACCCCTTTCCATATCTCACGTACGAGCTCTTGT
GGGACACTTATTACCGTCGTCGCCTTCGGAGACCCATCCCGCCTGCACCC
CCGGACGATGGGCGTACACGTCATTAGATAGTAGCAGTAGTGGACGTGTG
CATCCGGCGTGTGGGATATCTTGTCTGCGTGTTATGTGCCTGCAGGTGCT
GCGGCGCCGCATGCTTACATATCACCACTCTCCTTTTCGCTTTCGGTGCT
TCTGCTGGATGAACTGCGGTGTTGCTCGTGGGTGGCGCGCCGCCCACTGT
GTGCTTGTGCTGCCAGGACGGTGGTATCCACGTGCTGGTGCCTCAAGACC
AGAACGTGCAGTTTTTCTTCAGCGCTTGCTCCTTGCTGCTGCGCAACAGC
CCGGAGTCGATGGAAATGGTGAGAGCAAAAAGAGATGGGGGGAGGTCGCA
TCGGGAGACCTCCCCCCCCCCCCCCCCCCCCCCCCCGGGGGGCGGGGGGG
GGGGGGGGTGGGGTGGGGGGGGGGGTGGGGGCGGGGGCGGGGCGCCCCTC
TCCCGGCCGGNNNNNNNNNNGGGAGGGAAAAGGTGAGAAAAAAAAAAGGG
GGGGGGGGGGCGCCCCGGGGGACCCCCCCCCCCCCCCCCCCGTTGGCGAG
GGAAGTAATGTGTCGTAGGTGTATGTATTAGGAGCGCTCGGTGCCTTGGC
AAGCCCCCTCTTTTCTGGAAAAAAAACTTTTGTGGAAGAAAGTCGTTCTC
GACGGCGGTATGTATGTACGTGTCTGGGGCTCGCTCGCCGCGAGCGGCCA
GTTGCTGCTGTCCTCGTGGCACTCGGGGCGTCGCAACAAGCGCTGCAAGG
CACGGCGCTGCAGCCTCCAAATGGTACGGAGCACGCTACACGTCAGGTAC
GGCAGTATGGTGCTCACCCCTGCCGTCGATCCGTCTCTTTACACATGCGT
GCGTGCGCCCGCCGTGCGGCAGGTGGAGGACTGGTTTGCGCTCAAGGACA
CGTGCCCCTACGCGATGTACGACGACCAGAGCCGCCTGTACGCGGCGGTT
CTCAGAATGCAGCTCAGGTACGCCCCCGCCCCCCGTCTGCACAGCAGCCG
GCCGTCGGCCACCCCCGGGTGTTAGCTTTTGGTGTACACCCGACCGTCTG
ACTGTCCTCGGTGTGACGTTTTTCGCATCTCCCATGTAAATAAGCCTATG
TAGCGGCAATCGCCGGGTCTTGACTTACAGCAATTGTTCCGAGCTCTATC
CGGGGGCGCCATCTCACATACGCATGCTGAGTGATAGGCATGTGTGGCAT
TGTTTTTTTTTTTTCGCTCTTTTACACGTTTCGGCTTCGTGCGGCTGCCT
GCCTGCCTGCCTGCCTGCCTGCCTGCCTGCGCCCGTGCCGTGCGCCGTCT
TAAAAAACAAACAAAAAAAGATGGAGGGGGATAGAGGTGGACCACTCAGA
CCCCGCTACGACGGACTGCCTGGACGTCTGCGAGAAGAAGGAGACGCAGG
GCCGCTTCAGCTGGTAGGTTGATGTGGTTGTGTGTGTGTGTGTGTGTGTG
TTGTGTGTTTTCGTCCCATTTGTTCGGGCATCTGTCCACACGAAACACAC
GTAACGGTGTGGTGTAGTACACGCTTCGGTGCATGTTACCTGTACAACAG
AGGCGTATCCGCCGGGGTCACACAGGAGGGGGGTCAACACTCCCCTGGGC
GTTTTTTTTTCCCTTTTTTTTCTCCCTATTTTTTGCCCACGGGTTGATGG
ACCAGGCAGAAACAAAATCATTGCGTTATTGTGAGTTGTTTTTTTGGGGC
TCTAATTTCCAGGTGCTTTGACGCCGCCGTGCGAGCGCTGGGGATCCGCC
GGGTTCCGCAGCTGTTCCCGCCGGTCGCGTACAGTCGCCTGCCCACGAGA
AGTTACCGCGGAAGCTTCACGAAGGGCACCGATACCGGGTTGGTGTTCCA
GGTCAGTTTGGAGAATGGAGGATGGAGGGGAGCAATCGGCCGGGTTCGAA
GGAAACCAGCGGTTGTGGATAGACGCACTCGGTGTTGGTTGGTGTTGCTG
CAAAGGTGGTGCGGGTTTGGACGACTTTTCAAGGCGCGCGCAAAGAGGGG
CGGCGCCTTCTGAGAGGAAAGGCTGGTCGAGTGCGGCAAAACGAGCAGCA
GCGCTGCTGTTGTCTGTGTGAAACAATAGCTCGAACAGCTGTCCGTTTGG
TTGGTCGTTTAGGTGCTTTTTGCCTCTTGCAAGCTGACCGTCGGGTTAAG
TGTGTGCATATGGTGCGCGCTGCTGTCTTGCGTTGTTTTTGGGAGGGCAC
GCAACGCTGAGAGCAAGAATAACGCTCGCGAACTTCTCGTGACAGGGTCA
ATTCGGGGGAATCAAGGAACACCCGCACCTGGTGGAGTATGCGTTCTCGG
TGCACACGAAACCGTACTGTCAAAAGAGCTTCCAGATCTGCTCCCCGTTC
GTGGACGCGATACTGGCGCCCAACTACCAGAAGGGCATGCAGAGGTGAAA
ATGGTTTTGTCTCGGGAGGGCTTGTGTGCTTCGGGGAGTGTGTGAGTCGG
CGGATGTTTTCGCCGTTCCGGCAGCACGATGTTGACGACATACAATTGGA
AGTAGGAATAGTTTTACACAGAGCACGGGCGCGGGGCAGATACGGTTTGT
CGGAGGGATTCATTTGCTCGAACTTTGCGCTGCGGGTCGCTTTGTTTGGC
GCTTATTTACCCAAGAAACTCGATGATGAGTTCTTTTTCGTCATACATAG
TATACCAGCATACGCATGTTGATATGTATGTGTGATGCAAGAGCGCTCGA
CGTGCCACAGCAACCTGCAACACGCAGCGCAACCACACGGATCTCTGGCC
AACGCGGCGAGAGGTCCGGACGCCTTACTCTTGGCGTCCACTACCAAGGG
GGTTTGGTTGCGGTGTTCGATCACCGAAGCCGTCTGTCTCAGTGCGCGCA
GCCAATTCAGTGCTCAAAAGAGCCACACGGCCGACTGCCGCAGGACGACT
TGCTTTGTCGGAGGTATTTAGACCGGGGACAACAGGCGTTATGTCTTCTC
GCTCGAGGGAGTAGGACGCAGAGCCGACTTCTTTTTTTTTTTCTGGCGTG
CGTTTGCTGCTCATCGCCGTCTTGCAGATGCTACGGGCAAGGGTGGCTGG
CCAAGCCCTACAAGGCGCTGTCGAGCTTGCACCTCGGCGCGAAATCCGGG
CCCGCCGCAGACTCGGAAACGTTGAGTGTCCACGTGCAGAACACCAGGTG
CGGCACTTGAAACATGTCCGAAAAGTGAAATGATACGTAGCCATGAGGTT
TAAAGGCAAGGTCGCGGCAACCTTGGCTGCTGTGAGTGCCCCTTCGCGTG
AGACTCTCATTTGTAGCATGCAATGAAACGCCGTCCAATAAAAATAAAAA
AACATGTTTTATCATCTTTTTCAGGACTCACTTTCGTAGTAGATACAACT
ACATACAACAGTGTATTCTCATTCCTAAATATGTATGTATGCACGAAGTA
GTTTTCCTTTCCACGCTACATACGTATTTACCACTGCTGTCCTGGTTGAC
TGGCACGGCAGCTCGATGGAGGCGATGGTGCCAGGGCTCAACCTGCCGTA
CGGCATAGAGTTTACGGGCATTCGGCAAGGCGTCGTTGGCGCGGGGGGGA
AGCCGGACAGCGGCCCCGGGTGGCGGGAGATGGGCAGGAATAACGACAAG
AAGTTCTGCTTTGCCAGCTTGCCCGGGGGCGGCGGAAAGGAGTTCATGGG
GCAGGTGGGAATGGATAAGATATATGGTAGACGTGTTTGAGCGAGGGCCG
GAGAAAAAGAGGAGAAGCAAAAAAAACCCGGCGAGTTATCCCTCTATTTA
TCCCTCCTACAAGAAGCGTGTTCGCAATGGCCTTACTTCTGTGGTTCGGG
CGGTCTGGCCGCGATTGGTCTGGAAGTTGCCGATGTAGCAGTTCCGGTGC
CGAAAGCAGTTCCCTGGCCAGCTAGCTGTACGCCCTGCCCTGAGGTTGGG
ACACAAATCGGCACCAGTTCTCACGATGCACGTTTTTTTCTGCCGCTTTA
GTGCTGTGGTATTCTAATTGCCAAGCCCGAGAAAAATTGTGCTGGTAGTC
GAGCGACTCATTGGGCGTAGGTAGCATGCGCATCAAGCACCGATTGTTGT
CGAAAGTATGCACCAAGCCCGATCTCGCTTGAAACATACATATACGTTTG
CCCCTACAATGCAATTGGTCTTGCATGCCCCTGACCTCTTCGGCGGGATT
GGTGCGGCTTTTCCTGGTGGTGGGCGACTCGCTCGCAGGTGCTGGGGCCC
TTGCTGCTCCAGCGGTTTTGCGCGCTGAGCAGCTGTGACGGGATCAACGT
GCTGAAGGTGAGAGAGACAAGACTACGCCTCCCTTGATTTTTTTTTTCCA
AACGCACCTGACTTTCTGCCTAGTAACTTCGCAGGTGTTTACTGGAATAA
TCATATGGGATGAAGTATGGATATGGCTAATGGGGGGTCGGTTTGGGGTT
AGGTGTAGGGTTAGGGTTACGGAACCCCTGTCTGTATTTCCTATATAGAC
AGGAATTACAGGAATTCTTCGCGAAGGCGCTCCCCACCAGATTCTTTTTT
TTTCGTGTACATTGATATGTACGATGAAGCACGGTGCGTGCGGGACGGCA
GTCCTACATAAGCCTTCTGATAAACCAAGCATGATCTGCGTGCTACATAC
ATACTTCCTCTCTGTATCATAAGCCTGGTCCGTTATGGGCGCGTAGTCGT
TAGGGTACTTTCACGTTGTTGGCGTTTAGCCTTCGGCCGGGTGCGTTAGA
AAGGCAAAGCACATACAAAGCTGACTACAAACGGGTCCTACTCTGTTTGT
TTTTTTGCCCCGCAAGTGTCTTGGTGTTAGTGCGGGGACCCCAAGTGTAT
TGGTTTTAATGTGGAACCCCAACTGTCTTAGTTTTAGTGTGGGGTTACTA
TTATTGTGGTTTTAGTATGAGAACACGTTATAGATGGTTGGGTATAGCGG
GGGTTAGCTTTAGGGTTGGGATAATTCTTGTGTTTCTTTTGGGGGGGTTT
AGGCTTTGTGCACCTCCTGGAAAGGGGCAAAATTTGGCCGTTTTTGGGCC
GACTCAATGTTTTCCAGCCGTTCGGCCACATGGTGCAAGCACCAGCTACA
AAAAAAAAAGGTTTTCTTGCTAAAAAAACACCGGAGAAATCAACAAAATG
AACAGAAAACAGATCGGACACCGTTAAGGGGGCGCACAAACCTAACGGAC
CAGACTTATGATACAGAGGAAGTATGTACCAGATCTTTCGAGCGTGCTCG
ACTGCTGCGTCCACCGACCACAGCGATTTTAAATGATTTCCCGCCTTGCG
CACTGTCTAGTCAGTCACGCCCGTTTGCTGTTCGGCACGAGGTAAACTAA
AAAAGCACCAGCTCGTTTGCGCACGGAAGGTATCCCCCCTTGAAATGCCT
CAAATCGACAGAAGAGTCATGCCACCACTAAAAGGCATACTTCGAAGTAT
ATAGTAGGGTAATAAACACTACTCTTTGGCCCCCCGCCGCTGCCGAGATT
GCCCACTACATAAACCGTTCACGATCCCCATTCCATCCCATCCCATTTTT
TTTTCCGTGCGCGCCGGTTCTCGCGTGAAAGGCAAAGCAGCGAGCGGACA
AGGAGCAAATACCGTGCAAGATTGCCCGGGTGTACCAGGTGTTCCCGTAC
AACCTCATGTCGGACTACGCGGCCAACTCGAGGCAGCCGTCATGGCACAT
GTCCATGATCAGGGACCCGGTCGACAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9583:1258..7435-

>mRNA_L-elsbetiae_contig9583.18560.1 ID=mRNA_L-elsbetiae_contig9583.18560.1|Name=mRNA_L-elsbetiae_contig9583.18560.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2388bp|location=Sequence derived from alignment at L-elsbetiae_contig9583:1258..7435- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGTTTCTACACGAACGCGGACGGGGACAGGGGAGGCACAAACCTCCA
CTTCAACAAGCCCTACCTCATCCGCAAGTGGCTGCCGCACTACGACTGGG
TGCTGTGGCTGGACATGGATGCTCTCATCGTCGATATCGCGAAACCGATC
GAGAGTTTCATTGAAGAGGTTGGGGGCCAGATGGGTTTCTACACGAACGC
GGACGGGGACAGGGGAGGCACAAACCTCCACTTCAACAAGCCCTACCTCA
TCCGCAAGTGGCTGCCGCACTACGACTGGGTGCTGTGGCTGGACATGGAT
GCTCTCATCGTCGATATCGCGAAACCGATCGAGAGTTTCATTGAAGAGGT
TGGGGGCCAGGACGGTGGTATCCACGTGCTGGTGCCTCAAGACCAGAACG
TGCAGTTTTTCTTCAGCGCTTGCTCCTTGCTGCTGCGCAACAGCCCGGAG
TCGATGGAAATGGACGGTGGTATCCACGTGCTGGTGCCTCAAGACCAGAA
CGTGCAGTTTTTCTTCAGCGCTTGCTCCTTGCTGCTGCGCAACAGCCCGG
AGTCGATGGAAATGGTGGAGGACTGGTTTGCGCTCAAGGACACGTGCCCC
TACGCGATGTACGACGACCAGAGCCGCCTGTACGCGGCGGTTCTCAGAAT
GCAGCTCAGGTGGAGGACTGGTTTGCGCTCAAGGACACGTGCCCCTACGC
GATGTACGACGACCAGAGCCGCCTGTACGCGGCGGTTCTCAGAATGCAGC
TCAGGTGCTTTGACGCCGCCGTGCGAGCGCTGGGGATCCGCCGGGTTCCG
CAGCTGTTCCCGCCGGTCGCGTACAGTCGCCTGCCCACGAGAAGTTACCG
CGGAAGCTTCACGAAGGGCACCGATACCGGGTTGGTGTTCCAGGTGCTTT
GACGCCGCCGTGCGAGCGCTGGGGATCCGCCGGGTTCCGCAGCTGTTCCC
GCCGGTCGCGTACAGTCGCCTGCCCACGAGAAGTTACCGCGGAAGCTTCA
CGAAGGGCACCGATACCGGGTTGGTGTTCCAGGGTCAATTCGGGGGAATC
AAGGAACACCCGCACCTGGTGGAGTATGCGTTCTCGGTGCACACGAAACC
GTACTGTCAAAAGAGCTTCCAGATCTGCTCCCCGTTCGTGGACGCGATAC
TGGCGCCCAACTACCAGAAGGGCATGCAGAGGGTCAATTCGGGGGAATCA
AGGAACACCCGCACCTGGTGGAGTATGCGTTCTCGGTGCACACGAAACCG
TACTGTCAAAAGAGCTTCCAGATCTGCTCCCCGTTCGTGGACGCGATACT
GGCGCCCAACTACCAGAAGGGCATGCAGAGATGCTACGGGCAAGGGTGGC
TGGCCAAGCCCTACAAGGCGCTGTCGAGCTTGCACCTCGGCGCGAAATCC
GGGCCCGCCGCAGACTCGGAAACGTTGAGTGTCCACGTGCAGAACACCAG
ATGCTACGGGCAAGGGTGGCTGGCCAAGCCCTACAAGGCGCTGTCGAGCT
TGCACCTCGGCGCGAAATCCGGGCCCGCCGCAGACTCGGAAACGTTGAGT
GTCCACGTGCAGAACACCAGCTCGATGGAGGCGATGGTGCCAGGGCTCAA
CCTGCCGTACGGCATAGAGTTTACGGGCATTCGGCAAGGCGTCGTTGGCG
CGGGGGGGAAGCCGGACAGCGGCCCCGGGTGGCGGGAGATGGGCAGGAAT
AACGACAAGAAGTTCTGCTTTGCCAGCTTGCCCGGGGGCGGCGGAAAGGA
GTTCATGGGGCAGCTCGATGGAGGCGATGGTGCCAGGGCTCAACCTGCCG
TACGGCATAGAGTTTACGGGCATTCGGCAAGGCGTCGTTGGCGCGGGGGG
GAAGCCGGACAGCGGCCCCGGGTGGCGGGAGATGGGCAGGAATAACGACA
AGAAGTTCTGCTTTGCCAGCTTGCCCGGGGGCGGCGGAAAGGAGTTCATG
GGGCAGGTGCTGGGGCCCTTGCTGCTCCAGCGGTTTTGCGCGCTGAGCAG
CTGTGACGGGATCAACGTGCTGAAGGTGCTGGGGCCCTTGCTGCTCCAGC
GGTTTTGCGCGCTGAGCAGCTGTGACGGGATCAACGTGCTGAAGGCAAAG
CAGCGAGCGGACAAGGAGCAAATACCGTGCAAGATTGCCCGGGTGTACCA
GGTGTTCCCGTACAACCTCATGTCGGACTACGCGGCCAACTCGAGGCAGC
CGTCATGGCACATGTCCATGATCAGGGACCCGGTCGACAGGGCAAAGCAG
CGAGCGGACAAGGAGCAAATACCGTGCAAGATTGCCCGGGTGTACCAGGT
GTTCCCGTACAACCTCATGTCGGACTACGCGGCCAACTCGAGGCAGCCGT
CATGGCACATGTCCATGATCAGGGACCCGGTCGACAGG
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