mRNA_L-elsbetiae_contig9578.18554.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9578.18554.1
Unique NamemRNA_L-elsbetiae_contig9578.18554.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig9578.18554.1 vs. uniprot
Match: D7FXM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM3_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 2.370e-51
Identity = 93/125 (74.40%), Postives = 102/125 (81.60%), Query Frame = 1 
Query:    1 EDGGGAFFSFRVANRDNEVGLRVWEAGRALAEFCLGRSDLLEGKRVLELGAGIGMTGMAVAASCGARQVVLTDYAPKVLSNLEHNVEINRELLN---GLPGGEPDAPHP-PADIAVRFLDWTDYC 363
            E+ GG FFSFRVANRDNEVGLRVWEAGRALAEFCL  S LL GKRVLELGAGIGMTGMAVAA+CGA +VVLTDYAP+VL+NL HN+EINR LL    G   G  D P   P+ ++VRFLDWTDYC
Sbjct:  151 EEEGGTFFSFRVANRDNEVGLRVWEAGRALAEFCLAHSGLLRGKRVLELGAGIGMTGMAVAATCGAAEVVLTDYAPRVLANLHHNLEINRALLEAGAGQSNGNNDKPSTTPSGVSVRFLDWTDYC 275
[Close]
BLAST of mRNA_L-elsbetiae_contig9578.18554.1 vs. uniprot
Match: A0A6H5JKR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKR7_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 9.960e-33
Identity = 67/96 (69.79%), Postives = 75/96 (78.12%), Query Frame = 1 
Query:   88 LAEFCLGRSDLLEGKRVLELGAGIGMTGMAVAASCGARQVVLTDYAPKVLSNLEHNVEINRELL---NGLPGGEPDAPHP-PADIAVRFLDWTDYC 363
            + EFCL  S LL GKRVLELGAGIGMTGMAVAASCGA +VVLTDYAP+VL+NL HNVEINR LL   +G   G+ D P   P  ++VRFLDWTDYC
Sbjct:    1 MGEFCLAHSGLLRGKRVLELGAGIGMTGMAVAASCGAAEVVLTDYAPRVLANLHHNVEINRALLGAGDGRSNGDNDKPSTTPWGVSVRFLDWTDYC 96
[Close]
BLAST of mRNA_L-elsbetiae_contig9578.18554.1 vs. uniprot
Match: A0A1B6KLR7_9HEMI (FAM86 domain-containing protein n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KLR7_9HEMI)

HSP 1 Score: 100 bits (248), Expect = 2.880e-21
Identity = 51/113 (45.13%), Postives = 67/113 (59.29%), Query Frame = 1 
Query:   46 DNEVGLRVWEAGRALAEFCLGRSDLLEGKRVLELGAGIGMTGMAVAASCGARQVVLTDYAPKVLSNLEHNVEINRELLNGLPGGEPDAPHPPADIAVRFLDWTDYCAAGLADS 384
            D   GL+ WE G ALAE+CL  S  + GKRV+ELG G+G+TG+AV+ +C      LTD  P VLS L HN+++N+ LL G+            D+  R LDW D  A GL +S
Sbjct:  135 DGTTGLQTWEGGLALAEWCLQHSSEIVGKRVVELGCGLGLTGLAVSTTCRPLSYTLTDCHPSVLSALSHNLQLNQSLLAGI------------DVTTRLLDWEDSGAFGLPNS 235
[Close]
BLAST of mRNA_L-elsbetiae_contig9578.18554.1 vs. uniprot
Match: A0A2D4CDJ9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDJ9_PYTIN)

HSP 1 Score: 97.1 bits (240), Expect = 5.180e-20
Identity = 47/107 (43.93%), Postives = 68/107 (63.55%), Query Frame = 1 
Query:   31 RVANRDNEVGLRVWEAGRALAEFCLGRSDLLEGKRVLELGAGIGMTGMAVAASCGARQVVLTDYAPKVLSNLEHNVEINRELLNGLPGGEPDAPHPPADIAVRFLDW 351
            RVA+  NEVGL++WEAG  LAEF L   +L E + VLELGAG+G+TG+ +      R+++L+DYAPKV+ NL +N+EIN ++           P+   D+    +DW
Sbjct:  146 RVASVFNEVGLKIWEAGWFLAEFALAHRELFENRSVLELGAGVGITGIIIGKCIAVRRLLLSDYAPKVMQNLRYNIEINAQISR---------PYLAQDVDADVIDW 243
[Close]
BLAST of mRNA_L-elsbetiae_contig9578.18554.1 vs. uniprot
Match: A0A329SVC4_9STRA (FAM86 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SVC4_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.030e-19
Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 1 
Query:   31 RVANRDNEVGLRVWEAGRALAEFCLGRSDLLEGKRVLELGAGIGMTGMAVAASCGARQVVLTDYAPKVLSNLEHNVEINRELLNGLPGGEPDAPHPPADIAVRFLDW 351
            RVA+  NEVGL++WEAG  LAE+ +       G++VLELGAG+G TGMA+A  C + +VVLTDYAP V+ NL +NVE+N                    + V+ LDW
Sbjct:  128 RVASVFNEVGLKLWEAGWLLAEYIIAHESEFRGRKVLELGAGVGFTGMALACVCRSSRVVLTDYAPNVMQNLRYNVEVNTSKFV-------------CPVEVQTLDW 221
[Close]
BLAST of mRNA_L-elsbetiae_contig9578.18554.1 vs. uniprot
Match: A0A3R7HZ17_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HZ17_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.510e-19
Identity = 48/107 (44.86%), Postives = 63/107 (58.88%), Query Frame = 1 
Query:   31 RVANRDNEVGLRVWEAGRALAEFCLGRSDLLEGKRVLELGAGIGMTGMAVAASCGARQVVLTDYAPKVLSNLEHNVEINRELLNGLPGGEPDAPHPPADIAVRFLDW 351
            RVA+  NEVGL++WEAG  LAE+ +       G+ VLELGAG+G TGM ++  C A ++VLTDYAP V+ NL +NVEIN                    + V+ LDW
Sbjct:   70 RVASVFNEVGLKLWEAGWMLAEYAIAHESDFRGRNVLELGAGVGFTGMVLSCICPASRIVLTDYAPNVMQNLRYNVEINASKFL-------------CPVDVQTLDW 163
[Close]
BLAST of mRNA_L-elsbetiae_contig9578.18554.1 vs. uniprot
Match: A0A3R6Z645_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z645_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.940e-19
Identity = 50/118 (42.37%), Postives = 68/118 (57.63%), Query Frame = 1 
Query:   10 GGAFFSFRVANRDNEVGLRVWEAGRALAEFCLGRSDLLEGKRVLELGAGIGMTGMAVAASCG-ARQVVLTDYAPKVLSNLEHNVEINRELLNGLPGGEPDAPHPPADIAVRFLDWTDY 360
            G +  + RVA   NEVG+++WEAG  LAEF L   DL  G+RV+ELGAG+G TG+ +A+    A  VVLTDYAP V+ NL +N+E+N   L                +    +DWT +
Sbjct:   23 GDSIITCRVAAAHNEVGMKLWEAGFFLAEFVLSHPDLFRGQRVMELGAGVGFTGLVLASLPSVASAVVLTDYAPIVMQNLRYNIEVNASRLRC------------PQVDAMMVDWTTW 128
[Close]
BLAST of mRNA_L-elsbetiae_contig9578.18554.1 vs. uniprot
Match: M4B848_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B848_HYAAE)

HSP 1 Score: 93.6 bits (231), Expect = 4.970e-19
Identity = 51/107 (47.66%), Postives = 64/107 (59.81%), Query Frame = 1 
Query:   31 RVANRDNEVGLRVWEAGRALAEFCLGRSDLLEGKRVLELGAGIGMTGMAVAASCGARQVVLTDYAPKVLSNLEHNVEINRELLNGLPGGEPDAPHPPADIAVRFLDW 351
            RVA+  N+VGL++WEAG  LAE+ +        KRVLELGAG+G TGM +A  C + +VVLTDYAP VL NL +NVEIN      L             + V+ LDW
Sbjct:   96 RVASLLNDVGLKLWEAGWLLAEYVIAHEYDFRNKRVLELGAGVGFTGMVLACVCRSSRVVLTDYAPNVLQNLRYNVEINSNKFICL-------------VEVQALDW 189
[Close]
BLAST of mRNA_L-elsbetiae_contig9578.18554.1 vs. uniprot
Match: D0MRZ6_PHYIT (FAM86 domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MRZ6_PHYIT)

HSP 1 Score: 94.0 bits (232), Expect = 5.240e-19
Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 1 
Query:   31 RVANRDNEVGLRVWEAGRALAEFCLGRSDLLEGKRVLELGAGIGMTGMAVAASCGARQVVLTDYAPKVLSNLEHNVEINRELLNGLPGGEPDAPHPPADIAVRFLDWTDYCAAGLADSPP 390
            RVA+  NEVGL++WEAG  LAE+ +       G+ VLELGAG+G TG+A+A  C + +VVLTDYAP V+ NL +NVE+N                    + V+ LDW  +      D  P
Sbjct:  128 RVASVFNEVGLKLWEAGWLLAEYVIAHKSEFHGRNVLELGAGVGFTGIALACVCRSSRVVLTDYAPNVMQNLRYNVEVNSTKFI-------------CPVEVQTLDWDTWQPTEYEDDRP 234
[Close]
BLAST of mRNA_L-elsbetiae_contig9578.18554.1 vs. uniprot
Match: A0A662XN08_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XN08_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 8.560e-19
Identity = 50/120 (41.67%), Postives = 69/120 (57.50%), Query Frame = 1 
Query:   31 RVANRDNEVGLRVWEAGRALAEFCLGRSDLLEGKRVLELGAGIGMTGMAVAASCGARQVVLTDYAPKVLSNLEHNVEINRELLNGLPGGEPDAPHPPADIAVRFLDWTDYCAAGLADSPP 390
            RVA+  NEVGL++WEAG  LAE+ L        K VLELGAG+G TG+ +A +C A++V+LTDYAP V+ NL +NVE+N                    + V+ LDW  + +    D+ P
Sbjct:   64 RVASVFNEVGLKLWEAGWMLAEYVLAHDLEFRDKTVLELGAGVGFTGLVLACACRAKRVMLTDYAPNVMQNLRYNVEVNASKFR-------------CPVEVQVLDWDTWQSDNDVDNQP 170
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9578.18554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXM3_ECTSI2.370e-5174.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKR7_9PHAE9.960e-3369.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1B6KLR7_9HEMI2.880e-2145.13FAM86 domain-containing protein n=1 Tax=Graphoceph... [more]
A0A2D4CDJ9_PYTIN5.180e-2043.93Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A329SVC4_9STRA1.030e-1945.79FAM86 domain-containing protein n=2 Tax=Phytophtho... [more]
A0A3R7HZ17_9STRA4.510e-1944.86Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A3R6Z645_9STRA4.940e-1942.37Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
M4B848_HYAAE4.970e-1947.66Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
D0MRZ6_PHYIT5.240e-1941.67FAM86 domain-containing protein n=2 Tax=Phytophtho... [more]
A0A662XN08_9STRA8.560e-1941.67Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9578contigL-elsbetiae_contig9578:1011..3917 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score186.4
Seed ortholog evalue1.5e-44
Seed eggNOG ortholog2880.D7FXM3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.methyltransferase activity
EggNOG OGsKOG2497@1,KOG2497@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size702
Cds size699
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9578.18554.1prot_L-elsbetiae_contig9578.18554.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9578 1013..3917 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817023.711912-CDS-L-elsbetiae_contig9578:1012..14811622817023.711912-CDS-L-elsbetiae_contig9578:1012..1481Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9578 1013..1481 -
1691683990.1778374-CDS-L-elsbetiae_contig9578:1012..14811691683990.1778374-CDS-L-elsbetiae_contig9578:1012..1481Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9578 1013..1481 -
1622817023.7230096-CDS-L-elsbetiae_contig9578:2552..26881622817023.7230096-CDS-L-elsbetiae_contig9578:2552..2688Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9578 2553..2688 -
1691683990.1929295-CDS-L-elsbetiae_contig9578:2552..26881691683990.1929295-CDS-L-elsbetiae_contig9578:2552..2688Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9578 2553..2688 -
1622817023.7342978-CDS-L-elsbetiae_contig9578:3307..33471622817023.7342978-CDS-L-elsbetiae_contig9578:3307..3347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9578 3308..3347 -
1691683990.2057567-CDS-L-elsbetiae_contig9578:3307..33471691683990.2057567-CDS-L-elsbetiae_contig9578:3307..3347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9578 3308..3347 -
1622817023.74646-CDS-L-elsbetiae_contig9578:3863..39171622817023.74646-CDS-L-elsbetiae_contig9578:3863..3917Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9578 3864..3917 -
1691683990.2203104-CDS-L-elsbetiae_contig9578:3863..39171691683990.2203104-CDS-L-elsbetiae_contig9578:3863..3917Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9578 3864..3917 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9578.18554.1

>prot_L-elsbetiae_contig9578.18554.1 ID=prot_L-elsbetiae_contig9578.18554.1|Name=mRNA_L-elsbetiae_contig9578.18554.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=233bp
EDGGGAFFSFRVANRDNEVGLRVWEAGRALAEFCLGRSDLLEGKRVLELG
AGIGMTGMAVAASCGARQVVLTDYAPKVLSNLEHNVEINRELLNGLPGGE
PDAPHPPADIAVRFLDWTDYCAAGLADSPPPATPAPRDRGPAGPETAGFA
SSSSSSSNSPTPASATCGESGVGGSAGVPREDSRRRRPPPAADGCSVLGG
GQSSPAAAAAVGAETGEGERGAADPLGAPEVVL
back to top

mRNA from alignment at L-elsbetiae_contig9578:1011..3917-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9578.18554.1 ID=mRNA_L-elsbetiae_contig9578.18554.1|Name=mRNA_L-elsbetiae_contig9578.18554.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2907bp|location=Sequence derived from alignment at L-elsbetiae_contig9578:1011..3917- (Laminarionema elsbetiae ELsaHSoW15)
GAGGATGGAGGAGGGGCTTTCTTTTCGTTCAGGGTTGCGAATCGGGACAA
CGAGGTTGGTCGCCGCCGCTGCCGCCGCCGCTGCCGCTGCCGCTCCTGCT
GCCGCCCCTGCCGCTGTTTTTGTTGACTGCGCAGCGCTTGATGCCGCTGC
CGCTGCCGCTCCTGCCGCTGTTTATATTGGCTGCGCAGCGCTTGATGCCG
ACCACAGCAGTAGTAAACAGTCAAGATATTGTTGTGTTTCCGTCCGCCCT
CTGTTGGTCCCAAGAAACTCGGCACACAAACATAGCGACGCCGGCCCCTT
ATTGTGACTCTCGGGGCGCGGTTCGGTGGACGACCACCCTTCTTGGTGCG
CTTCGTTTTTCGCTCACTGCTTGGTTGGTTGGTCTCCAACCCCCCCGCAA
TGTGTAAGCCCTGAGCCACGCCCGCCGCGCACACGCCCGACGCGCACGCA
CGCGCGTATGCAGCTGGGTCCACCTAAATAGTTTGTTCCGAACGGCCCCG
TCTGTCTTCACTCTGGTCCTCATGCGTTCCGTCCCACTCGCCCGCTGTCC
CGCCCACCGGCTGCTAGCAGGTGGGGCTTCGGGTGTGGGAGGCCGGGAGG
GCGTTGGCAGGTTAGTGTGGGTGAGACTGCGTGCCGTGCGCCTTTTTGCC
TGCTCTCCGCCCGAAGCCCCCAGCTACGATCGACCCGTCGGCCATTTTTT
TTTCCTCGGCGGGCCAAAAGTACCAGTTCATGATGGTTGAAAAACTAGAG
TAGAGGAAGGGGGGGCGGCGGGGTTGGTTGGGTTGGTTAGATGGATGGGG
CTTTGTTTGCGTCGCGGCGTCTCTCCTGCCTCTCCATGCCACCGCCACGA
TTCGAAACTGGTATATACAGTATTTCGACCACATTTTGCTGCTTACATGT
ATCTATTTATTATTGTACCGCTGCCGGGTTTTTGGCTGTGCTCCTACGAT
ACGATGCCTGCCTGCTTGCCGGTCGCGTCTGTTATCAAGACCGCTGCGCT
CCCGTTGTTCTCTCTCCGATCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCCGTTGTAACCGCACGCTGCTGCCGTGCTTCCCAC
CGCTGTGCGCCACACTCTATTGCTGCACGATACTGCCGGTGTGCCCTCCC
TGCGGCGCCTGTCCCACCTGCTGCTGTATGTGCTCACACACATACGGCGC
AACCACCATGTGCTTTCCCGACGCTCAAGAATTTTGCCTTGGGCGCTCGG
ACTTGCTGGAAGGGAAGAGGGTGCTGGAGCTCGGTGCAGGCATCGGCATG
ACGGGCATGGCGGTGGCTGCTTCTTGCGGGGCGAGGCAAGTGGTCCTCAC
GGACTACGCACCCAAGTAAGCCTCCGCATCCTCTCGGAGGGAAGACAAGA
GCTACCGTAGGTGACATAAGATAAGACACCCCCTGGACCGATTTTCAAAG
CTCAAGTACTCCACAGCAAGCAGAGCGTCAGTCCCGAAAAGGGCGGCGTT
GGAAAGATCTCGTGAAAATGTGGCGTTTGTGGTTAGAGTCGTATTCGTTG
CGGATTAACCAAGCTTTCAATATCGGTCCAGGGGGTGTGGTATCTTATGT
CACCCACGGTAGTTCCCTTCCAGGCGGTTGTTCGACCTCACCGTCGACGA
GGGAAAGGGACGGCTGAACCCTTCTCGCGATAAAAACAGTAGGCAAGCGC
CGCAGACGGGGGGAGTGGGCGGCCTTGGGGAAAGGAACTCTTGTGTGTGA
CCACGGTTCAGTACTCTGGCAAGATGTCCTCGTGACAGGGAGCCCATCGA
GCACTGAAAATAAATGTGAAAAGAAAAAGAAGAAAAAGAAAAAAAAAAAA
GGTGGTTGTTGCATCTGGCGTATGTAGCGCCCGAGCTTTATTTGAGACCT
CGAGCTTTGAGGACACTTGTCGAAATGCTCGCGCTCACGAGGTATGAACT
GCAAGTGCGCGCGGTTTGGTGCGCTCGGTGCGACAGAGTGATTTGCTAAT
ACTGAGGGGGGGCATGCCCCCCCCCCCCCACTCCGCTCGCTTTAAGGCGG
CCCCTCCTCGCTTCCTCAGTACTGTTTACACCCTGATAGGGGATCTTTAG
GACTACGCCATACGCGCTTTCTGATTGGTCAAGCGTGTGTGCGGGACCAC
GTTCTGACCTGCGTACCACGCGTCCCCCGGAAGCGGCGCAGCCGCATTCG
CGGCGATTTCTCAGCCCCACGGCCCCGGTTGGACGTCGGTGCGGGTTAGG
GTTGGGGTTGGGTGGGTTGGGTCGGTCACGTGTGTGCCTTCTGGTTCTGA
GTGTGAACCATCTGCAAAACATCGTTTTAGCAGTAAAGAGTCCCTATCAG
TGTGTAACCCAGGCTGTCGCCCCCCCCCCCCCCCCCCGCGCCCCTTCCCC
TCCCGTTACATATGTATGTACGCCGCCTCCTTAAAGGGTGCTCTCCAACC
TTGAGCACAACGTGGAAATCAACCGCGAGCTGCTCAACGGCCTGCCCGGC
GGGGAACCCGACGCTCCCCACCCGCCCGCGGATATCGCCGTGCGGTTTCT
CGACTGGACGGACTACTGCGCTGCTGGCCTTGCCGACTCCCCCCCGCCGG
CGACGCCGGCACCGCGAGATCGCGGCCCGGCTGGCCCTGAGACTGCCGGC
TTCGCGAGCAGCAGCAGCAGCAGCAGCAACAGCCCGACGCCAGCCTCGGC
GACGTGCGGCGAAAGCGGCGTCGGCGGGTCGGCCGGCGTGCCGAGGGAGG
ACAGCCGCCGCCGCCGCCCCCCCCCCGCCGCCGACGGCTGCAGTGTTCTA
GGCGGAGGCCAATCTTCGCCGGCGGCGGCGGCGGCGGTTGGGGCTGAAAC
GGGCGAGGGAGAGAGGGGCGCGGCGGACCCTCTGGGTGCGCCGGAAGTGG
TGCTGGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig9578:1011..3917-

>mRNA_L-elsbetiae_contig9578.18554.1 ID=mRNA_L-elsbetiae_contig9578.18554.1|Name=mRNA_L-elsbetiae_contig9578.18554.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1398bp|location=Sequence derived from alignment at L-elsbetiae_contig9578:1011..3917- (Laminarionema elsbetiae ELsaHSoW15)
GAGGATGGAGGAGGGGCTTTCTTTTCGTTCAGGGTTGCGAATCGGGACAA
CGAGGAGGATGGAGGAGGGGCTTTCTTTTCGTTCAGGGTTGCGAATCGGG
ACAACGAGGTGGGGCTTCGGGTGTGGGAGGCCGGGAGGGCGTTGGCAGGT
GGGGCTTCGGGTGTGGGAGGCCGGGAGGGCGTTGGCAGAATTTTGCCTTG
GGCGCTCGGACTTGCTGGAAGGGAAGAGGGTGCTGGAGCTCGGTGCAGGC
ATCGGCATGACGGGCATGGCGGTGGCTGCTTCTTGCGGGGCGAGGCAAGT
GGTCCTCACGGACTACGCACCCAAAATTTTGCCTTGGGCGCTCGGACTTG
CTGGAAGGGAAGAGGGTGCTGGAGCTCGGTGCAGGCATCGGCATGACGGG
CATGGCGGTGGCTGCTTCTTGCGGGGCGAGGCAAGTGGTCCTCACGGACT
ACGCACCCAAGGTGCTCTCCAACCTTGAGCACAACGTGGAAATCAACCGC
GAGCTGCTCAACGGCCTGCCCGGCGGGGAACCCGACGCTCCCCACCCGCC
CGCGGATATCGCCGTGCGGTTTCTCGACTGGACGGACTACTGCGCTGCTG
GCCTTGCCGACTCCCCCCCGCCGGCGACGCCGGCACCGCGAGATCGCGGC
CCGGCTGGCCCTGAGACTGCCGGCTTCGCGAGCAGCAGCAGCAGCAGCAG
CAACAGCCCGACGCCAGCCTCGGCGACGTGCGGCGAAAGCGGCGTCGGCG
GGTCGGCCGGCGTGCCGAGGGAGGACAGCCGCCGCCGCCGCCCCCCCCCC
GCCGCCGACGGCTGCAGTGTTCTAGGCGGAGGCCAATCTTCGCCGGCGGC
GGCGGCGGCGGTTGGGGCTGAAACGGGCGAGGGAGAGAGGGGCGCGGCGG
ACCCTCTGGGTGCGCCGGAAGTGGTGCTGGGTGCTCTCCAACCTTGAGCA
CAACGTGGAAATCAACCGCGAGCTGCTCAACGGCCTGCCCGGCGGGGAAC
CCGACGCTCCCCACCCGCCCGCGGATATCGCCGTGCGGTTTCTCGACTGG
ACGGACTACTGCGCTGCTGGCCTTGCCGACTCCCCCCCGCCGGCGACGCC
GGCACCGCGAGATCGCGGCCCGGCTGGCCCTGAGACTGCCGGCTTCGCGA
GCAGCAGCAGCAGCAGCAGCAACAGCCCGACGCCAGCCTCGGCGACGTGC
GGCGAAAGCGGCGTCGGCGGGTCGGCCGGCGTGCCGAGGGAGGACAGCCG
CCGCCGCCGCCCCCCCCCCGCCGCCGACGGCTGCAGTGTTCTAGGCGGAG
GCCAATCTTCGCCGGCGGCGGCGGCGGCGGTTGGGGCTGAAACGGGCGAG
GGAGAGAGGGGCGCGGCGGACCCTCTGGGTGCGCCGGAAGTGGTGCTG
back to top