mRNA_L-elsbetiae_contig9548.18535.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9548.18535.1 vs. uniprot
Match: D7FWX3_ECTSI (Axonemal 1-beta dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX3_ECTSI) HSP 1 Score: 197 bits (500), Expect = 1.930e-56 Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 2 Query: 2 VKNDLTGHFHRFMASLVEMSNQAKGKTVMYLPAEMMEIGEVSVAAKDKDLVQHLESIVIHWTRQIKDVVNNHDNALSAEILGPLEEIEFWRCRTVDLS 295 VKNDLTGHFHRFMASLVEMSNQAKGKTVMYLPA+MMEIGE+SVAAKDKDLVQHLESIVIHWTRQIKDVVNNHDNALSAEILGPLEEIEFWRCR VDLS Sbjct: 240 VKNDLTGHFHRFMASLVEMSNQAKGKTVMYLPADMMEIGEISVAAKDKDLVQHLESIVIHWTRQIKDVVNNHDNALSAEILGPLEEIEFWRCRMVDLS 337
BLAST of mRNA_L-elsbetiae_contig9548.18535.1 vs. uniprot
Match: A0A835Z4V1_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V1_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.730e-36 Identity = 67/103 (65.05%), Postives = 80/103 (77.67%), Query Frame = 2 Query: 2 VKNDLTGHFHRFMASLVEMSNQAKGKTVMYLPAEMMEIGEVSVAA-----KDKDLVQHLESIVIHWTRQIKDVVNNHDNALSAEILGPLEEIEFWRCRTVDLS 295 V DL H+H+FMASLVE SNQ +GKTV+YLP E+ ++ AA DKDLVQHLES+VIHWTRQIKDV++N+D AL AE LGPLEE++FWR RTVDLS Sbjct: 62 VTKDLVSHYHKFMASLVEASNQVEGKTVLYLPRELEDMATYDAAAIAARATDKDLVQHLESVVIHWTRQIKDVISNYDMALDAETLGPLEEVQFWRSRTVDLS 164
BLAST of mRNA_L-elsbetiae_contig9548.18535.1 vs. uniprot
Match: A0A482UHI3_9ARCH (DHC_N1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UHI3_9ARCH) HSP 1 Score: 120 bits (300), Expect = 2.650e-30 Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 2 VKNDLTGHFHRFMASLVEMSNQAKGKTVMYLPAEMMEIGEVSVAAKDKDLVQHLESIVIHWTRQIKDVVNNHDNAL-SAEILGPLEEIEFWRCRTVDLS 295 V+ D G HRFMAS+VE + Q +GKTV+YLPAE + +VAA DKDLVQ LE+ VIHWTRQIK+VV+N DNA S+E GPLEEIEFW RT DLS Sbjct: 164 VRKDFVGQMHRFMASVVETNFQLQGKTVLYLPAESVSADPAAVAA-DKDLVQRLEATVIHWTRQIKEVVSNQDNATTSSETGGPLEEIEFWSSRTQDLS 261
BLAST of mRNA_L-elsbetiae_contig9548.18535.1 vs. uniprot
Match: A0A2R5GWD4_9STRA (Dynein heavy chain 2, axonemal n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWD4_9STRA) HSP 1 Score: 120 bits (302), Expect = 9.670e-30 Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 2 Query: 2 VKNDLTGHFHRFMASLVEMSNQAKGKTVMYLPAEMMEIGEVSVAAKDKDLVQHLESIVIHWTRQIKDVVNNHDNALSAEILGPLEEIEFWRCRTVDLS 295 V+ D G H+F+ASL E +NQ+KGKT++Y+P E ++ E AA+DKDLVQ LES +I WTRQIK+VVNN D A + E GPLEEI+FWR RT DLS Sbjct: 258 VRKDFAGQLHKFVASLTETTNQSKGKTILYIPLEAVDDPEA--AARDKDLVQRLESTMIRWTRQIKEVVNNQDMAANTETSGPLEEIQFWRSRTQDLS 353
BLAST of mRNA_L-elsbetiae_contig9548.18535.1 vs. uniprot
Match: A0A388K173_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K173_CHABU) HSP 1 Score: 120 bits (300), Expect = 1.800e-29 Identity = 60/97 (61.86%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 5 KNDLTGHFHRFMASLVEMSNQAKGKTVMYLPAEMMEIGEVSVAAKDKDLVQHLESIVIHWTRQIKDVVNNHDNALSAEILGPLEEIEFWRCRTVDLS 295 K + G HRFMASL E + KGKTV+Y+P E +E S KDKDLVQ LES +IHWTRQIK+VVNN DNA E GPL EIEFWR R+VDLS Sbjct: 284 KKEFMGQLHRFMASLTECTYHVKGKTVLYIPQEDLESMTESRLKKDKDLVQRLESALIHWTRQIKEVVNNQDNAELGEEAGPLAEIEFWRSRSVDLS 380
BLAST of mRNA_L-elsbetiae_contig9548.18535.1 vs. uniprot
Match: A0A2P6NRV5_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NRV5_9EUKA) HSP 1 Score: 117 bits (294), Expect = 1.160e-28 Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 2 Query: 2 VKNDLTGHFHRFMASLVEMSNQAKGKTVMYLPAEMMEIGEVSVAAKDKDLVQHLESIVIHWTRQIKDVVNNHDNALSAEILGPLEEIEFWRCRTVDLS 295 VK + TGH +FMASL E++ Q++G TV+Y+P E + + ++AA +KDLV LESI+IHWTRQIK+VV N DNA E GPL EIEFWR RTVDLS Sbjct: 153 VKKEFTGHAQKFMASLTEVAFQSQGSTVLYIPNE--NLTDPNLAANEKDLVHRLESILIHWTRQIKEVVTNQDNAELVENAGPLSEIEFWRLRTVDLS 248
BLAST of mRNA_L-elsbetiae_contig9548.18535.1 vs. uniprot
Match: A0A0G4IMY8_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IMY8_PLABS) HSP 1 Score: 116 bits (290), Expect = 4.030e-28 Identity = 54/97 (55.67%), Postives = 69/97 (71.13%), Query Frame = 2 Query: 2 VKNDLTGHFHRFMASLVEMSNQAKGKTVMYLPAEMMEIGEVSVAAKDKDLVQHLESIVIHWTRQIKDVVNNHDNALSAEILGPLEEIEFWRCRTVDL 292 V+ D +G H+FMA+L E N +KG T++Y+P E ++ +V A DKDL+Q LES +IHWTRQIK+VV N D + E GPLEEIEFWR RTVDL Sbjct: 205 VRKDFSGQLHKFMANLTETVNHSKGSTILYMPDE--DLSDVEAAVADKDLIQRLESTLIHWTRQIKEVVTNQDTSQHVEESGPLEEIEFWRSRTVDL 299
BLAST of mRNA_L-elsbetiae_contig9548.18535.1 vs. uniprot
Match: A0A5B8MZU6_9CHLO (Heavy chain of dynein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MZU6_9CHLO) HSP 1 Score: 115 bits (289), Expect = 5.490e-28 Identity = 56/98 (57.14%), Postives = 69/98 (70.41%), Query Frame = 2 Query: 2 VKNDLTGHFHRFMASLVEMSNQAKGKTVMYLPAEMMEIGEVSVAAKDKDLVQHLESIVIHWTRQIKDVVNNHDNALSAEILGPLEEIEFWRCRTVDLS 295 VK TG H+FMASL E++ + KGKTV+Y+P E + KDKDL+Q LESI+IHWTRQ+K+VVNN DN+ E GPL EIEFWR R+VDL Sbjct: 153 VKKQFTGQLHKFMASLTEVTYERKGKTVLYIPQE------TTGKKKDKDLIQRLESILIHWTRQVKEVVNNQDNSELGEDAGPLAEIEFWRSRSVDLG 244
BLAST of mRNA_L-elsbetiae_contig9548.18535.1 vs. uniprot
Match: A0A8J6CA31_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CA31_DIALT) HSP 1 Score: 115 bits (288), Expect = 7.500e-28 Identity = 52/98 (53.06%), Postives = 72/98 (73.47%), Query Frame = 2 Query: 2 VKNDLTGHFHRFMASLVEMSNQAKGKTVMYLPAEMMEIGEVSVAAKDKDLVQHLESIVIHWTRQIKDVVNNHDNALSAEILGPLEEIEFWRCRTVDLS 295 +K + +G H+FMASL E + +AKGKT +Y+P E + G+ A+++KDLVQ LES +IHWTRQIKDVVN D+ A+ +GPL EI+FWR RT++L Sbjct: 183 IKKEFSGQLHKFMASLTETTFEAKGKTTLYIPEEAL--GDADAASREKDLVQRLESTLIHWTRQIKDVVNRQDDGEQADDVGPLAEIQFWRSRTINLG 278
BLAST of mRNA_L-elsbetiae_contig9548.18535.1 vs. uniprot
Match: A0A250X4L5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X4L5_9CHLO) HSP 1 Score: 115 bits (288), Expect = 7.500e-28 Identity = 56/98 (57.14%), Postives = 72/98 (73.47%), Query Frame = 2 Query: 2 VKNDLTGHFHRFMASLVEMSNQAKGKTVMYLPAEMMEIGEVSVAAKDKDLVQHLESIVIHWTRQIKDVVNNHDNALSAEILGPLEEIEFWRCRTVDLS 295 V+ D T H+FMA+L E +A+GKT++Y+P E + G+ +AK KDLVQ LESI+IHWTRQIK+VVN D+ S+E GPL EIEFWR R+VDLS Sbjct: 169 VRADFTAQLHKFMATLTETVYEARGKTILYIPQE--DYGDAKSSAKQKDLVQRLESIIIHWTRQIKEVVNQQDSQDSSEHSGPLSEIEFWRERSVDLS 264 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9548.18535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9548.18535.1 >prot_L-elsbetiae_contig9548.18535.1 ID=prot_L-elsbetiae_contig9548.18535.1|Name=mRNA_L-elsbetiae_contig9548.18535.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=99bp RQERPHRTLSPLHGLAGRNVQPGQRQDGHVFAGGDDGNRRGVCGRERQGPback to top mRNA from alignment at L-elsbetiae_contig9548:3310..5662+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9548.18535.1 ID=mRNA_L-elsbetiae_contig9548.18535.1|Name=mRNA_L-elsbetiae_contig9548.18535.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2353bp|location=Sequence derived from alignment at L-elsbetiae_contig9548:3310..5662+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9548:3310..5662+ >mRNA_L-elsbetiae_contig9548.18535.1 ID=mRNA_L-elsbetiae_contig9548.18535.1|Name=mRNA_L-elsbetiae_contig9548.18535.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=594bp|location=Sequence derived from alignment at L-elsbetiae_contig9548:3310..5662+ (Laminarionema elsbetiae ELsaHSoW15)back to top |