mRNA_L-elsbetiae_contig9543.18532.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9543.18532.1
Unique NamemRNA_L-elsbetiae_contig9543.18532.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9543.18532.1 vs. uniprot
Match: D8LCA4_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCA4_ECTSI)

HSP 1 Score: 625 bits (1612), Expect = 2.250e-215
Identity = 361/555 (65.05%), Postives = 406/555 (73.15%), Query Frame = 2
Query:  140 APSVLASSSLLFLLFPQLWSCCTAFVILCPQDS---STHPNC--RASARAREGMGRTTAATGATGP-RQQLASCRRCHSSPFESNRERTELEEHSPGCRGGGNLVAATAXXXXSNRGRRDFPSWRRNRRRRDRQRL-GAKPSEGAEDG-REVIDAELSD-ISQIEKADLESKKRKSREEPDDKVKEAAPVKVAKKKAVRAAPXXXXXXFTFAGSGFASLEDAAASDQFVDLSGGRNSCLKRVDEAGLESDGNPPKGSKIKVHYKMKVVGGENIASSGEDRSKPFEFRLGRWPSEATHGWDKALSAMHKGEVATLVCGPQYAFGEAGAPPKIPPNATVETQLELVDWLDLAATYNTVPDRVETDDELRERWSEELAAGTSPMKDEAGLKKKMQAEMATKAAAAPPDTDHRGKKIFDLKSKEAREIMAKQKVQGYTPDFAYVERSTYLDLYIPVPEGTRAKDVTVEIHPDRMLVVVKGTGVLTKGRFQGKVALDGCYWVMSDLSLDPPGSAALGTQNDEVRQGPVYRGETSVQVYLEKMKPFDTLWESVYQPPEDGE 1777
            A +VLAS SLL LL PQLW    AFV++ P      ++H     RA+A A +     T A  A  P R +  S  RCH   F+S+                G +V           GR              RQRL  A+P    E   REVIDAE SD  S+I +AD  SK++K REE                    + P XXXXX   AGSGFASLE+A AS +F DLSGGR SCLKRVDE G E+DGNPPKGSKIKVHYKMKVV GENIASSGEDR+KPFEFRLGRWPSEATHGWDKA+SAMH+GEVATL+CGPQYAFG AGAPP+IPPNATVET+LEL DWLDLAA YN VP +VETD+ELRERWSE+LA GTSPMKDEAGL KK+QAEM+ KA+A P +TDHRGKKI+DL+SKEAREIMAKQKVQGYTPDF YVER+ YLDLYIPVP GTRAKDVTVEIHPDRMLVVVKGTGV+T+G FQGKVALDGC+W+MSDLSLDPPGS ALGTQ+DEVRQGPVYRGET VQV+LEK KPFDTLWE+VY+P EDG+
Sbjct:    4 ASNVLASVSLL-LLSPQLWHLSVAFVVVHPPSDHGGASHGRFSERAAAAASQWARAPTTAVHADSPGRTRQGSRCRCHPPSFDSSSXXXXXXXXXXXXASEGRVVGGA--------GRXXXXXXX------SRQRLLQARPGNEVEPPEREVIDAEFSDDFSKIVEADRASKRKKPREEKPAXXXXXXXXXXXXXXXAASTPAXXXXXXXXAGSGFASLEEALASGEFADLSGGRGSCLKRVDEDGFETDGNPPKGSKIKVHYKMKVVDGENIASSGEDRTKPFEFRLGRWPSEATHGWDKAISAMHRGEVATLICGPQYAFGAAGAPPRIPPNATVETRLELEDWLDLAAEYNAVPGKVETDEELRERWSEDLADGTSPMKDEAGLNKKLQAEMSAKASATPENTDHRGKKIYDLESKEAREIMAKQKVQGYTPDFGYVERANYLDLYIPVPAGTRAKDVTVEIHPDRMLVVVKGTGVVTQGHFQGKVALDGCHWLMSDLSLDPPGSTALGTQDDEVRQGPVYRGETCVQVFLEKRKPFDTLWENVYRPREDGD 543          
BLAST of mRNA_L-elsbetiae_contig9543.18532.1 vs. uniprot
Match: A0A835YYM1_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM1_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.110e-44
Identity = 104/294 (35.37%), Postives = 150/294 (51.02%), Query Frame = 2
Query: 1004 GWDKALSAMHKGEVATLVCGPQYAFGEAGAPPKIPPNATVETQLELVDWLDLAATYNTVPDRVETDDELRERWSEELAAGTSPMKDEAGLKKKMQAEMATKAAAAPPDTDHRGKKIFDLKSKEAREIMAKQKVQGYTPDFAYVERSTYLDLYIPVPEGTRAK--------------------------------------DVTVEIHPDRMLVVVKGTG-----VLTKGRFQGKVALDGCYWVMSDLSLDPPGSAALGTQNDEVRQGPVYRGETSVQVYLEKMKPFDTLWESVY 1756
            GWD A+  M KGE A+++C PQYA+GEAGAPPKIPP A++E +LEL+DW D+AA Y+      ET +E  ERW +E+ +GTSP+K++ G +  ++   A +             K+ D+   + R   A+Q V G    + Y+E+  +LDLY+ VPEGTRA                                       DV  +I P R+ + +          + +G   G+VALDG YWVMS+++ +     A      +V  G   RG   VQVYLEK+ P DT+W  V+
Sbjct:    3 GWDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLDWEDVAARYSEYARPGETHEERMERWEQEIESGTSPIKEDVGPQPGIRTVTADEVTKG---------KMVDVNDPQVRRAAARQLVCGQGEGYTYLEKGAFLDLYVTVPEGTRAXXXXXXXXXXXXXXXXXAANEXXXXXXXXXXXXXXXXXADVLCDIAPRRLSLRITAQPDAPPLTILEGTLHGRVALDGSYWVMSEVAPE-----AYDELRSDVGFGLTARG-AFVQVYLEKLPPDDTIWPDVF 281          
BLAST of mRNA_L-elsbetiae_contig9543.18532.1 vs. uniprot
Match: A0A0L7KRI6_9NEOP (Peptidylprolyl isomerase (Fragment) n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7KRI6_9NEOP)

HSP 1 Score: 106 bits (265), Expect = 2.240e-23
Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 2
Query:  788 DQFVDLSGGRNSCLKRVDEAGLESDGNPPKGSKIKVHYKMKVVGGENIASSGEDRSKPFEFRLGRWPSEATHGWDKALSAMHKGEVATLVCGPQYAFGEAGAPPKIPPNATVETQLELVDW 1150
            DQ VD+SG R   LKR+ + G  SD  P  G ++ VHY   +V G    SS +DR++PFEF+LG+        WD  ++ M KGEV  L C P+YA+G AG+PPKIPPN+ ++ ++E++DW
Sbjct:    4 DQGVDISGDRG-VLKRIIQEGEGSD-TPNPGCQVTVHYTGTLVDGSKFDSS-KDRNEPFEFQLGK-------AWDVGVATMKKGEVCVLTCAPEYAYGAAGSPPKIPPNSILQFEIEMIDW 114          
BLAST of mRNA_L-elsbetiae_contig9543.18532.1 vs. uniprot
Match: A0A8J6CE85_DIALT (Peptidylprolyl isomerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CE85_DIALT)

HSP 1 Score: 112 bits (281), Expect = 1.130e-21
Identity = 56/123 (45.53%), Postives = 76/123 (61.79%), Query Frame = 2
Query:  782 ASDQFVDLSGGRNSCLKRVDEAGLESDGNPPKGSKIKVHYKMKVVGGENIASSGEDRSKPFEFRLGRWPSEATHGWDKALSAMHKGEVATLVCGPQYAFGEAGAPPKIPPNATVETQLELVDW 1150
            A  + +D+SG    CLKRV EAG  S G PP GS++KVHY   +    +   S  DR   FEF +G+   +   GWD  +++MHKGE A L C P+YA+G  G+PPKIPP AT++ ++EL  W
Sbjct:    2 ADSEAIDVSGDAG-CLKRVLEAGDPSAGTPPAGSRVKVHYVGTLAADGSKFDSSRDRGTEFEFVIGQ--GQVIKGWDVGVASMHKGEKAVLTCTPEYAYGARGSPPKIPPGATLDFEVELFSW 121          
BLAST of mRNA_L-elsbetiae_contig9543.18532.1 vs. uniprot
Match: A0A2A4IZY8_HELVI (Peptidylprolyl isomerase n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4IZY8_HELVI)

HSP 1 Score: 100 bits (250), Expect = 1.130e-20
Identity = 52/122 (42.62%), Postives = 75/122 (61.48%), Query Frame = 2
Query:  788 DQFVDLSG-GRNSCLKRVDEAGLESDGNPPKGSKIKVHYKMKVVGGENIASSGEDRSKPFEFRLGRWPSEATHGWDKALSAMHKGEVATLVCGPQYAFGEAGAPPKIPPNATVETQLELVDW 1150
            D+ VD++  G    LKR+ + G  +D  P  G ++ VHY   ++ G    SS  DR++PFEF LG+        WD  ++ M KGEV  L C P YA+G AG+PPKIPPNAT++ ++E++DW
Sbjct:    4 DEGVDITKTGDRGVLKRIIKEGTGTD-TPNPGCQVTVHYTGTLLDGTKFDSS-RDRNEPFEFNLGK--GSVIKAWDIGVATMKKGEVCVLTCAPLYAYGNAGSPPKIPPNATLQFEIEMIDW 121          
BLAST of mRNA_L-elsbetiae_contig9543.18532.1 vs. uniprot
Match: H9JVS1_BOMMO (Peptidylprolyl isomerase n=1 Tax=Bombyx mori TaxID=7091 RepID=H9JVS1_BOMMO)

HSP 1 Score: 97.8 bits (242), Expect = 5.310e-20
Identity = 55/132 (41.67%), Postives = 77/132 (58.33%), Query Frame = 2
Query:  788 DQFVDLS-GGRNSCLKRVDEAGLESDGNPPKGSKIKVHYKMKVVGGENIASSGEDRSKPFEFRLGRWPSEATHGWDKALSAMHKGEVATLVCGPQYAFGEAGAPPKIPPNATVETQLELVDWL--DLAATYN 1174
            DQ VD++  G    LKR+   G E    P +G  + VHY   ++ G    SS  DR++PFEF LG+        W   +  M KGEV  L C P+YA+G +G+PPKIPPNAT++ ++E++DW   DL+ T N
Sbjct:    4 DQGVDITKNGDRGVLKRITREG-EGTETPNQGCHVSVHYVGTLLDGTKFDSS-RDRNEPFEFCLGK--DGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEMIDWRLEDLSPTKN 131          
BLAST of mRNA_L-elsbetiae_contig9543.18532.1 vs. uniprot
Match: A0A0G4IT04_PLABS (Peptidylprolyl isomerase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IT04_PLABS)

HSP 1 Score: 103 bits (257), Expect = 8.950e-20
Identity = 52/120 (43.33%), Postives = 76/120 (63.33%), Query Frame = 2
Query:  797 VDLSGGRNSCLKRVDEAGLESDGNPPKGSKIKVHYKMKVVGGENIASSGEDRSKPFEFRLGRWPSEATHGWDKALSAMHKGEVATLVCGPQYAFGEAGAPPKIPPNATVETQLELVDWLD 1156
            VD+SG  +  +K++     E   +PP  SK+ VHY   ++ G    SS  DR+ PFEF +G+        WD+ ++ M +GEV  LVC P+YA+GEAG+PPKIP NAT++ ++EL+DW D
Sbjct:    4 VDISG--DGGIKKIVLKEGEGTESPPPNSKVTVHYVGTLLDGTKFDSS-RDRADPFEFTIGK--GSVIKAWDQGVATMKRGEVCKLVCAPEYAYGEAGSPPKIPANATLQFEIELIDWTD 118          
BLAST of mRNA_L-elsbetiae_contig9543.18532.1 vs. uniprot
Match: E2B9Y2_HARSA (Peptidylprolyl isomerase n=4 Tax=Ponerini TaxID=141711 RepID=E2B9Y2_HARSA)

HSP 1 Score: 103 bits (258), Expect = 9.190e-20
Identity = 54/119 (45.38%), Postives = 77/119 (64.71%), Query Frame = 2
Query:  797 VDLSGGR-NSCLKRVDEAGLESDGNPPKGSKIKVHYKMKVVGGENIASSGEDRSKPFEFRLGRWPSEATHGWDKALSAMHKGEVATLVCGPQYAFGEAGAPPKIPPNATVETQLELVDW 1150
            VDLS  + N  LK + + G + D  P  G K+KVHY   ++ G    SS +DR KPF+F LGR       GWD  +++M KGE+ATL C P+YA+G+ G+PP IPP+AT++ ++EL+ W
Sbjct:    4 VDLSPAKDNGVLKEITQEG-QGDDTPTVGCKVKVHYTGTLLDGTKFDSS-KDRGKPFKFDLGR--GSVIKGWDIGVASMKKGEIATLTCAPEYAYGKNGSPPLIPPDATLKFEVELLSW 118          
BLAST of mRNA_L-elsbetiae_contig9543.18532.1 vs. uniprot
Match: A0A6J1X1W9_GALME (Peptidylprolyl isomerase n=2 Tax=Galleria mellonella TaxID=7137 RepID=A0A6J1X1W9_GALME)

HSP 1 Score: 103 bits (258), Expect = 1.030e-19
Identity = 53/122 (43.44%), Postives = 78/122 (63.93%), Query Frame = 2
Query:  788 DQFVDLS-GGRNSCLKRVDEAGLESDGNPPKGSKIKVHYKMKVVGGENIASSGEDRSKPFEFRLGRWPSEATHGWDKALSAMHKGEVATLVCGPQYAFGEAGAPPKIPPNATVETQLELVDW 1150
            DQ VD+S  G    LKR+ + G  +D  P  G ++ VHY   ++ G    SS +DR++PFEF+LG+        WD  ++ M KGEV  L C P+YA+G AG+PPKIPPN+T++ ++E++DW
Sbjct:    4 DQGVDISKAGDRGVLKRIIKEGEGTD-TPNPGCQVTVHYTGTLLDGTKFDSS-KDRNEPFEFQLGK--GSVIKAWDIGVATMKKGEVCVLTCAPEYAYGAAGSPPKIPPNSTLQFEIEMIDW 121          
BLAST of mRNA_L-elsbetiae_contig9543.18532.1 vs. uniprot
Match: A0A0N1IEI0_PAPMA (Peptidylprolyl isomerase n=7 Tax=Papilio TaxID=7145 RepID=A0A0N1IEI0_PAPMA)

HSP 1 Score: 103 bits (258), Expect = 1.030e-19
Identity = 52/122 (42.62%), Postives = 79/122 (64.75%), Query Frame = 2
Query:  788 DQFVDLS-GGRNSCLKRVDEAGLESDGNPPKGSKIKVHYKMKVVGGENIASSGEDRSKPFEFRLGRWPSEATHGWDKALSAMHKGEVATLVCGPQYAFGEAGAPPKIPPNATVETQLELVDW 1150
            D+ +D+S  G    LKR+ + G  +D  P  G ++ VHY   ++ G    SS +DR++PFEF+LG+   E    WD  ++ M KGEV  L C P+YA+G AG+PPKIPPN+T++ ++E++DW
Sbjct:    4 DEGIDISKAGDRGVLKRIIKEGEGTD-TPNPGCQVTVHYTGTLLDGTKFDSS-KDRNEPFEFQLGK--GEVIKAWDIGVATMKKGEVCVLTCAPEYAYGAAGSPPKIPPNSTLQFEVEMIDW 121          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9543.18532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCA4_ECTSI2.250e-21565.05Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YYM1_9STRA2.110e-4435.37Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A0L7KRI6_9NEOP2.240e-2345.45Peptidylprolyl isomerase (Fragment) n=1 Tax=Operop... [more]
A0A8J6CE85_DIALT1.130e-2145.53Peptidylprolyl isomerase n=1 Tax=Diacronema luther... [more]
A0A2A4IZY8_HELVI1.130e-2042.62Peptidylprolyl isomerase n=1 Tax=Heliothis viresce... [more]
H9JVS1_BOMMO5.310e-2041.67Peptidylprolyl isomerase n=1 Tax=Bombyx mori TaxID... [more]
A0A0G4IT04_PLABS8.950e-2043.33Peptidylprolyl isomerase n=1 Tax=Plasmodiophora br... [more]
E2B9Y2_HARSA9.190e-2045.38Peptidylprolyl isomerase n=4 Tax=Ponerini TaxID=14... [more]
A0A6J1X1W9_GALME1.030e-1943.44Peptidylprolyl isomerase n=2 Tax=Galleria mellonel... [more]
A0A0N1IEI0_PAPMA1.030e-1942.62Peptidylprolyl isomerase n=7 Tax=Papilio TaxID=714... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9543contigL-elsbetiae_contig9543:2..6528 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score639.0
Seed ortholog evalue2.2e-180
Seed eggNOG ortholog2880.D8LCA4
Hectar predicted targeting categorychloroplast
EggNOG free text desc.FK506 binding
EggNOG OGsCOG0545@1,KOG0543@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionFKBP domain protein
Ec32 orthologEc-14_005490.1
Exons6
Model size2301
Cds size1806
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9543.18532.1prot_L-elsbetiae_contig9543.18532.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9543 454..6485 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817021.3230648-UTR-L-elsbetiae_contig9543:1..4531622817021.3230648-UTR-L-elsbetiae_contig9543:1..453Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9543 2..453 -
1691683988.5358312-UTR-L-elsbetiae_contig9543:1..4531691683988.5358312-UTR-L-elsbetiae_contig9543:1..453Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9543 2..453 -
1622817021.4071317-UTR-L-elsbetiae_contig9543:6485..65281622817021.4071317-UTR-L-elsbetiae_contig9543:6485..6528Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9543 6486..6528 -
1691683988.6120257-UTR-L-elsbetiae_contig9543:6485..65281691683988.6120257-UTR-L-elsbetiae_contig9543:6485..6528Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9543 6486..6528 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817021.335305-CDS-L-elsbetiae_contig9543:453..8281622817021.335305-CDS-L-elsbetiae_contig9543:453..828Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9543 454..828 -
1691683988.5472758-CDS-L-elsbetiae_contig9543:453..8281691683988.5472758-CDS-L-elsbetiae_contig9543:453..828Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9543 454..828 -
1622817021.3486784-CDS-L-elsbetiae_contig9543:1285..14911622817021.3486784-CDS-L-elsbetiae_contig9543:1285..1491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9543 1286..1491 -
1691683988.5569706-CDS-L-elsbetiae_contig9543:1285..14911691683988.5569706-CDS-L-elsbetiae_contig9543:1285..1491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9543 1286..1491 -
1622817021.3601916-CDS-L-elsbetiae_contig9543:3360..36521622817021.3601916-CDS-L-elsbetiae_contig9543:3360..3652Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9543 3361..3652 -
1691683988.5671213-CDS-L-elsbetiae_contig9543:3360..36521691683988.5671213-CDS-L-elsbetiae_contig9543:3360..3652Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9543 3361..3652 -
1622817021.3707633-CDS-L-elsbetiae_contig9543:4358..44481622817021.3707633-CDS-L-elsbetiae_contig9543:4358..4448Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9543 4359..4448 -
1691683988.5771456-CDS-L-elsbetiae_contig9543:4358..44481691683988.5771456-CDS-L-elsbetiae_contig9543:4358..4448Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9543 4359..4448 -
1622817021.383281-CDS-L-elsbetiae_contig9543:5137..56931622817021.383281-CDS-L-elsbetiae_contig9543:5137..5693Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9543 5138..5693 -
1691683988.5880804-CDS-L-elsbetiae_contig9543:5137..56931691683988.5880804-CDS-L-elsbetiae_contig9543:5137..5693Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9543 5138..5693 -
1622817021.3943472-CDS-L-elsbetiae_contig9543:6198..64851622817021.3943472-CDS-L-elsbetiae_contig9543:6198..6485Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9543 6199..6485 -
1691683988.6017523-CDS-L-elsbetiae_contig9543:6198..64851691683988.6017523-CDS-L-elsbetiae_contig9543:6198..6485Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9543 6199..6485 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9543.18532.1

>prot_L-elsbetiae_contig9543.18532.1 ID=prot_L-elsbetiae_contig9543.18532.1|Name=mRNA_L-elsbetiae_contig9543.18532.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=602bp
MLSYPLRPLNNRPPRIWASRFTVFFCIMTRMMAPSVLASSSLLFLLFPQL
WSCCTAFVILCPQDSSTHPNCRASARAREGMGRTTAATGATGPRQQLASC
RRCHSSPFESNRERTELEEHSPGCRGGGNLVAATAASSSSNRGRRDFPSW
RRNRRRRDRQRLGAKPSEGAEDGREVIDAELSDISQIEKADLESKKRKSR
EEPDDKVKEAAPVKVAKKKAVRAAPAPAPGPFTFAGSGFASLEDAAASDQ
FVDLSGGRNSCLKRVDEAGLESDGNPPKGSKIKVHYKMKVVGGENIASSG
EDRSKPFEFRLGRWPSEATHGWDKALSAMHKGEVATLVCGPQYAFGEAGA
PPKIPPNATVETQLELVDWLDLAATYNTVPDRVETDDELRERWSEELAAG
TSPMKDEAGLKKKMQAEMATKAAAAPPDTDHRGKKIFDLKSKEAREIMAK
QKVQGYTPDFAYVERSTYLDLYIPVPEGTRAKDVTVEIHPDRMLVVVKGT
GVLTKGRFQGKVALDGCYWVMSDLSLDPPGSAALGTQNDEVRQGPVYRGE
TSVQVYLEKMKPFDTLWESVYQPPEDGEGDASDSAPLAGASASEAGAGGG
S*
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mRNA from alignment at L-elsbetiae_contig9543:2..6528-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9543.18532.1 ID=mRNA_L-elsbetiae_contig9543.18532.1|Name=mRNA_L-elsbetiae_contig9543.18532.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6527bp|location=Sequence derived from alignment at L-elsbetiae_contig9543:2..6528- (Laminarionema elsbetiae ELsaHSoW15)
GGCAAGATAAGCCAGAAATGGCCGATCCCCGGGGCGCGGGGTTATGCTGT CATACCCACTTCGTCCTCTCAATAACCGACCCCCCCGAATATGGGCTTCG CGCTTCACAGTCTTTTTCTGCATCATGACAAGGATGATGGCACCATCCGT GTTGGCGTCATCCAGCTTGCTGTTCCTTCTCTTCCCCCAGCTATGGAGTT GTTGTACGGCTTTTGTGATTCTATGCCCTCAGGATAGTTCCACACACCCG AACTGTCGAGCGTCGGCGAGGGCGCGGGAGGGGATGGGCCGCACCACTGC TGCTACTGGTGCCACCGGTCCACGACAGCAGTAAGTGGGAAGCGCACTGT AAATCGTGGCGCTCTTCCGAGCGCCAGAAGACTGCTCGTGAGTTTTCCGG AGTAAGCAGCAAGGTTTCGTTGATTATTGCCTTTCTAGGCCTGTCGTCTC GTTTACTCGGTGGTGGCACTTGTACTTGGGAAGATGGAAGAGGTCATGTT TTAAACTTTAAACGACGGCCCGCAGCCCGCGCCGCAGATCGATCCACTAG TGGTACCAAGCCACAGTAGTATGTAGCACTTTTCAGTGCAGGTGTTGAAG CTGCGTAGCTTGATATACAAACTCAATGAACATGTTTGGTCCTGTTGTGC ATAGATATGTGCATACCTGTACTACCCCTGCTGCTTGTAGAAGGCCTTAT AACTGACTGTAGCTGGAGGTGGAGCACGCGCACGATCTACGGCGGCTTAT AGACTTGTCTTAAGCGAACGACCTGAAAAACACATCAGCCTGTCGGTGCG TATCGCCCGCCACGCTCGCAACGGTTTCGCGGCAGACTGGCCTCCTGCCG TCGCTGCCACTCATCCCCGTTCGAAAGCAACCGGGAGCGAACAGAACTGG AGGAGCACTCCCCCGGCTGCCGCGGCGGTGGCAACCTCGTAGCCGCCACG GCGGCCAGCAGCAGCAGTAACAGAGGTCGCAGAGATTTCCCGTCATGGAG GAGAAATCGGAGGAGAAGGGACCGCCAGCGGCTGGGAGCAAAGCCGAGCG AGGGAGCAGAGGATGGACGCGAAGTGATCGACGCGGAATTGTCCGACATC AGCCAGATCGAAAAGGCGGATTTAGAGAGCAAGAAAAGGAAATCCCGGGA GGAGCCGGACGACAAAGTAAAAGAAGCGGCTCCGGTCAAGGTGGCCAAGA AGAAGGCCGTCAGAGCAGCCCCCGCCCCGGCCCCCGGCCCTTTCACCTTC GCGGGCTCCGGTTTCGCGTCCCTGGAAGATGCCGCTGCCTCGGACCAGTT CGTTGATCTTTCGGGCGGGCGTAACTCTTGCCTGAAGCGCGTGGACGAAG CCGGGCTCGAGAGCGACGGAAACCCTCCGAAAGGCTCCAAGGTGTGTATC TATGTACGTAGACTGCTGTCCTCTGTCAAACACGGCGGTATGTGGCGTGA CGGCGCTCGACGACGATGCCCGCGCAATCCCGCGCTGTGTAGCCCACGCT ACATATGCATCGTAGAAGAGCGAAGGAAAACGTACGTGGTGGCAACAGCT GGCTCCAGGCTATGCGAGAGTAGACGTAGGGTCCCAAGTTCGCCGTGTTG TGCGTCCTTTTTTCTTGCGTCAGATTGCACACGTGTCGGGTTTTTTAGTC CCAATGCATGCGCGAGGACGCAGAAGTGGCGCGCGCGACTCTCGGAAGCA TGCTGCTGTTTCGGAAGGCGCGACCGTCATCATCATCTCGGCCGGCCTTT TCGTCCCGACGGGTGTATCCTTGCCCCATCCGATCGTAGACACGTAGAGC CTGGCCTGTTTTATTTCGTCCGTCCGTCGCTGCACAGGGGGGGGGGGGGG GATTTGCCGCCCCCAACTCCCGGGACCAACATTTACTAGATACAACGCTA GGCTTTGTTCCTCGTTAATCCTCTCACTGATTATCGCGGCTTTTTGTACG TTTTTCCCGAAAGCAGACCGACCCTTGCCCCTTGCAATGATTCTGCTGTG CCCCCTCGTTGTGTCGAAACGGTCATATCCAACAAACGACCTCTCCTTTT GCCGCTGCTGTACGATTCTTGCATGGGAAGATCAAGGTGCACTACAAGAT GAAGGTTGTCGGTGGGGAGAACATCGCCTCCAGCGGGGAGGACCGGAGCA AACCCTTCGAGTTTAGATTGGTGGGTTTGCAGGCGTTGCTGTTTTCGTTG TCGTTGTCGTCGTGGCTTTTTTTTTTTCAAGCTGGTTGATTCCCCTTTTC TCTCTTCGGTGAACCCACCAAAAATCAGCCACAAAGGCAGGGTTCTCTGC TTCTGTTTCAGGTTGTCAAGTGAGAGAGAGGAGGTACGTTACTTCTGAAT GGACGTGCGAATGCCTGTCTTTTTTCGTAGACCCCCGTAAGCATCTCCGA TTGTAAGGCCACTCTTCTGCCCGGCGGGTGGTTGGTTTGTGAGGGCTTGC GTTGGTGTGTCGTGAATCTCAAGACCCCGACCGCCAACCTCACTTCCAAG GGGCTAAATTAACCTCGCTGGTTGCATGGTCCATGTTTCTTTGCGCCGTA ACCCCTTGATCCTAGCACCGCCCCAAGCTGGATTGCCAGAACCTACATTC GCACCCTACACAAGCTTTTTATCTCCGCGCCTTCGCGGTGTCCACGGGGG CGCACGCAAAAGCTGCCGAGACGTGTGACAAAAAACTTGATATCAGTCCT TCCTAGTCTGCACTAATTACCTGGACTATCTACGTGCGCTACACTACCTC TGCTGCCTCCGGCGTGCGAACAACAACGTGCGCATGAACATGTGTAAACG TATGTTTCTGTTTTTCGACCCCTTGGACCTCCACCAAAAAAAAAAAAACA CACACACACACACTCAACAACAACAGGGCCGATGGCCGAGCGAAGCCACG CACGGCTGGGACAAGGCCCTGTCGGCGATGCACAAGGGGGAGGTCGCCAC CCTAGTCTGCGGGCCGCAGTACGCGTTCGGCGAGGCCGGGGCGCCGCCGA AGATTCCCCCCAACGCGACCGTTGAGACGCAGCTGGAGCTGGTGGACTGG CTCGATCTCGCGGCGACGTACAACACGGTCCCGGACAGGGTGGAGACGGA CGACGAACTGAGAGAACGGTGGAGCGAGGAACTGGCCGCCGGCACCAGCC CCATGAAGGATGAAGCGGGTGCGGGACTTGATGCACGCGGTTTGGGGGTT GGGGGGGGGGCGAGGGGGGGTGTGCGTGGGTGTTGGAAGAGTTGTGGGGG GGGGGCGTCTGGGGGGCAACGAGATCTGCTCGATTTGTGCCTCACGGGAG TTTTTGTAGAGTTTACGCTTGGGCAAAGCGTGTTGTTCGCCACTTTTGTC CCGAGCCTGCTTTGTTTTCGTCTTCCAAAAAGACAGCCAGCGATCCAAGT CGATCCTGCAGAGCATCTCATTCTTTCGCATCCACGCGCGCGTGCTTCCT GTTTAATACACTCCAATACTTTCACACATATTTTTTTGTGTGATATTCTA AAGCCTCTTATCTGCAACCCCCTCACGTTGATGCCGACACGACCGCTGAT GCCGACACAACCCCTTCCCTGTCCCCCAATCCCTACAAGCTGGTTCACGG AATTGATCCAAAATTAATCGGGTCCATTTTATTTTTCGTGTACCTTTTCT TGGGTTAAGTTAGCCTGTGACCACGGGAATTGACCGCATCAAGTGTTGGA GTAGTACGGACATTGAGAGGTACTGGATGGAGAGATCGGAACGGTTTTTA ATGTGAAGACAACATACATACATTCATACATAATTCCACAACTTGTCCCA AACGCAATACACTCTCGATTTTTATAAAAACTCATACCGTAGTGTTCCCC ATGAGCAACGAAATAGGGTGTCATTTTTTTTTTCCCGAGTTAGGCCTTGG GTGCGAAGTTATAGGCGAAAATGTTGTCCCGACCAACCAGCGGCCTCCAA ACTGTTGTAGAGTTAAAAATACGAATTTACAACCCAATTACTGTTCAATC TCCACATACTGTACATGATTGTAACCGCCATCAGCTAGGAAATCTAGCTA AAAAACTGTTTTGAAATCGGTTGCCATCGGACCGAGTTATACCCCAAAAT GTGGTATTTCGGTTATGACGACGCCAAATTTCCCTGGTACATAATATAGG ACAAAGATCGAGATGTACCGTACACGGTTTCCTTTATATCTCTTCGGTGA AATATTCAATCCTGCTGAAACTTGGTAACTTGCTAGATGTCGATGCTGCA AATGCGAAAAATATTTGTTGGAGATGTTTTGACAGGTTGGTCCGCATTTT ACCGGCTTTCGGGGGTCCCGGCGTTAGGACCCCCGGAAGCCGGTACAGAA TACGTTAAAGAAAAAAAATCAGATTCAACCATTCCGTCGTAATACAAGGA ACATTCGTACGTAGTTTCGTCAGATAACTCAAAAGACTGACGCAGCGGGG TCGTTTTCCGTGAACAAACCGGGAAAAAGTCCCGAAGTATACTTTAATCA AGTAATTAGGGGCGCCCGCGGATATTTTAACACTTCAGCGCGCGTTTGCT CGATTTCTCACGCCGTTTTCAAGAGTTAGGCTCTGAAATTTTGCACACGT ATTCCATGTACCTATACGAAAAAACTAATTGTGGGTCTCTTTGATTTTTT ATTTCCTAACCGGATTTCCGGGGTCCCAAAACGTCCACCTATTCTCGGAA ACCACCATGACCCTCGAAATCCGGTCAGAAAATAAAAAAATAAAAAAGAC CCATTGAGTAGTTTTTTCGTATAGGCGCATGGAATACGTGTGCAAAATTT CATAGCCTAACTCCTAAAAACGGCATGAGAAATCGCTGTGGAGTACGCTT GGGGGTATTTCCTCGAACCAGCTTGTATAGGGCAGCCCTTCGGCTTCTTT TTGCCTCTCCCCTACCCCTCTCGACCCGTTGGTGTCCTCTTCGCTTTCAC ATCTTGCCCGACCCCCGACCCCCATAGCAACCCTTTCGCTTCTTTTCCGC TTACCCCCCTCCGCCTTGTCGCCCCGCCGATGGGCAGGGCTGAAGAAGAA AATGCAGGCGGAGATGGCCACGAAGGCTGCCGCGGCCCCTCCAGACACCG ACCACCGCGGCAAGAAGATCTTCGACCTCAAGAGCAAGGAGGCGCGCGAG ATCATGGCCAAGCAAAAGGTGCAGGGTTACACGCCCGACTTCGCGTATGT GGAGAGGTCCACCTACCTGGACCTCTACATCCCTGTCCCCGAGGTGCGTG TTTGGTAGCTTTCGAGCGCTGCAGAAGCGCTTCTTGGGCCGCGTGTGGGG GCAGGCGGACGTCTTGGCGGCGTTGGGTGTGTTAGTTATTTTCGTCGGTT GCCTCGTGTTGTCTCCGAGCAAAGCAGACGCGGGGACGAACACACACACA CACACACATGGGTTCAAGGAGCAAGCTTCAAGCTTAAGCTTGTCGTAATT TTTCTCCATCCCCTCCTCCACGTTGAAGGCGTGTGCTCGTGTGCCGCGAT TACTGCTGTTGTGTCACTTTGGCCCGGCCGGGATATCCAATCCTCTCTGT TTTTATTTTCCACCTCCCCTTTTCCATGCCTCTTACGCTCTCTCTCTGTC TCTCTCTCTCTGTCTCTGCGTGTGTCTCTCTGTCTCGCTTCCCGTCTGTC TTGTTCGTTGCTGTCCCCCCCCCCTCGGCATGACTTTTCTCTACCTTCAG GGTACCCGAGCGAAAGACGTTACCGTCGAGATCCACCCGGACCGCATGCT TGTCGTGGTGAAAGGGACGGGCGTCCTGACCAAGGGACGGTTTCAGGGCA AGGTGGCCCTCGACGGGTGCTACTGGGTCATGTCGGACCTGTCCCTGGAC CCTCCCGGCTCGGCGGCGCTGGGCACGCAGAACGACGAAGTGCGCCAGGG GCCCGTCTACCGCGGAGAGACGAGCGTGCAGGTGTATCTCGAGAAGATGA AGCCGTTCGACACGCTGTGGGAGAGCGTCTACCAGCCGCCGGAAGACGGG GAGGGTGACGCCAGCGACAGCGCACCGCTGGCTGGGGCGTCGGCGAGCGA GGCAGGAGCGGGGGGCGGGAGCTGATTGGTTTTGATGCCGGCGTGGGTGT TGGTCGGCGTGGTGTTTTTTTTCTGAGGGCGCTTGTGTTTCGTGCATTGC TCCTTTTTTTGTGCAGGAGCCATCGCGATATTGCCCCTGGCTTGAGTGTT GTGTTGACATTTTGTTTTGTACTCCAGATGGCTATTTCTGCGCTACAAAA GCAATTACCCCCCCCCCCGCGCGCGCGCGCGCACACACACACCAGCGAAC CAGCGGTGGTTGCTTACACCTGTTTGTTGAGGGAAAGCTCGCCGCTCGTC CGTTGCTCTGATAATGAGGAGCCCGGCAACAGCCATTTTCGTCGCCGGAC TCGGCGACTAGATTATAGCGGGGTGATTTTTAATCCAGGAGGTTGTTTGT GTGTTGTCTGTCTATCTGTCTGTGTGTGTGTGCGTTTTTTTGTTTCTTTT TTGCACCTTCCGCAACCATTTCAGCAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9543:2..6528-

>mRNA_L-elsbetiae_contig9543.18532.1 ID=mRNA_L-elsbetiae_contig9543.18532.1|Name=mRNA_L-elsbetiae_contig9543.18532.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3612bp|location=Sequence derived from alignment at L-elsbetiae_contig9543:2..6528- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGTCATACCCACTTCGTCCTCTCAATAACCGACCCCCCCGAATATG
GGCTTCGCGCTTCACAGTCTTTTTCTGCATCATGACAAGGATGATGGCAC
CATCCGTGTTGGCGTCATCCAGCTTGCTGTTCCTTCTCTTCCCCCAGCTA
TGGAGTTGTTGTACGGCTTTTGTGATTCTATGCCCTCAGGATAGTTCCAC
ACACCCGAACTGTCGAGCGTCGGCGAGGGCGCGGGAGGGGATGGGCCGCA
CCACTGCTGCTACTGGTGCCACCGGTCCACGACAGCAATGCTGTCATACC
CACTTCGTCCTCTCAATAACCGACCCCCCCGAATATGGGCTTCGCGCTTC
ACAGTCTTTTTCTGCATCATGACAAGGATGATGGCACCATCCGTGTTGGC
GTCATCCAGCTTGCTGTTCCTTCTCTTCCCCCAGCTATGGAGTTGTTGTA
CGGCTTTTGTGATTCTATGCCCTCAGGATAGTTCCACACACCCGAACTGT
CGAGCGTCGGCGAGGGCGCGGGAGGGGATGGGCCGCACCACTGCTGCTAC
TGGTGCCACCGGTCCACGACAGCAACTGGCCTCCTGCCGTCGCTGCCACT
CATCCCCGTTCGAAAGCAACCGGGAGCGAACAGAACTGGAGGAGCACTCC
CCCGGCTGCCGCGGCGGTGGCAACCTCGTAGCCGCCACGGCGGCCAGCAG
CAGCAGTAACAGAGGTCGCAGAGATTTCCCGTCATGGAGGAGAAATCGGA
GGAGAAGGGACCGCCAGCGGCTGGGAGCAAAGCCGAGCGAGGGAGCAGAG
GATGGACGCGAAGTGATCGACGCGGAATTGTCCGACATCAGCCAGATCGA
AAAGGCGGATTTAGAGAGCAAGAAAAGGAAATCCCGGGAGGAGCCGGACG
ACAAAGTAAAAGAAGCGGCTCCGGTCAAGGTGGCCAAGAAGAAGGCCGTC
AGAGCAGCCCCCGCCCCGGCCCCCGGCCCTTTCACCTTCGCGGGCTCCGG
TTTCGCGTCCCTGGAAGATGCCGCTGCCTCGGACCAGTTCGTTGATCTTT
CGGGCGGGCGTAACTCTTGCCTGAAGCGCGTGGACGAAGCCGGGCTCGAG
AGCGACGGAAACCCTCCGAAAGGCTCCAAGACTGGCCTCCTGCCGTCGCT
GCCACTCATCCCCGTTCGAAAGCAACCGGGAGCGAACAGAACTGGAGGAG
CACTCCCCCGGCTGCCGCGGCGGTGGCAACCTCGTAGCCGCCACGGCGGC
CAGCAGCAGCAGTAACAGAGGTCGCAGAGATTTCCCGTCATGGAGGAGAA
ATCGGAGGAGAAGGGACCGCCAGCGGCTGGGAGCAAAGCCGAGCGAGGGA
GCAGAGGATGGACGCGAAGTGATCGACGCGGAATTGTCCGACATCAGCCA
GATCGAAAAGGCGGATTTAGAGAGCAAGAAAAGGAAATCCCGGGAGGAGC
CGGACGACAAAGTAAAAGAAGCGGCTCCGGTCAAGGTGGCCAAGAAGAAG
GCCGTCAGAGCAGCCCCCGCCCCGGCCCCCGGCCCTTTCACCTTCGCGGG
CTCCGGTTTCGCGTCCCTGGAAGATGCCGCTGCCTCGGACCAGTTCGTTG
ATCTTTCGGGCGGGCGTAACTCTTGCCTGAAGCGCGTGGACGAAGCCGGG
CTCGAGAGCGACGGAAACCCTCCGAAAGGCTCCAAGATCAAGGTGCACTA
CAAGATGAAGGTTGTCGGTGGGGAGAACATCGCCTCCAGCGGGGAGGACC
GGAGCAAACCCTTCGAGTTTAGATTGATCAAGGTGCACTACAAGATGAAG
GTTGTCGGTGGGGAGAACATCGCCTCCAGCGGGGAGGACCGGAGCAAACC
CTTCGAGTTTAGATTGGGCCGATGGCCGAGCGAAGCCACGCACGGCTGGG
ACAAGGCCCTGTCGGCGATGCACAAGGGGGAGGTCGCCACCCTAGTCTGC
GGGCCGCAGTACGCGTTCGGCGAGGCCGGGGCGCCGCCGAAGATTCCCCC
CAACGCGACCGTTGAGACGCAGCTGGAGCTGGTGGACTGGCTCGATCTCG
CGGCGACGTACAACACGGTCCCGGACAGGGTGGAGACGGACGACGAACTG
AGAGAACGGTGGAGCGAGGAACTGGCCGCCGGCACCAGCCCCATGAAGGA
TGAAGCGGGGCCGATGGCCGAGCGAAGCCACGCACGGCTGGGACAAGGCC
CTGTCGGCGATGCACAAGGGGGAGGTCGCCACCCTAGTCTGCGGGCCGCA
GTACGCGTTCGGCGAGGCCGGGGCGCCGCCGAAGATTCCCCCCAACGCGA
CCGTTGAGACGCAGCTGGAGCTGGTGGACTGGCTCGATCTCGCGGCGACG
TACAACACGGTCCCGGACAGGGTGGAGACGGACGACGAACTGAGAGAACG
GTGGAGCGAGGAACTGGCCGCCGGCACCAGCCCCATGAAGGATGAAGCGG
GGCTGAAGAAGAAAATGCAGGCGGAGATGGCCACGAAGGCTGCCGCGGCC
CCTCCAGACACCGACCACCGCGGCAAGAAGATCTTCGACCTCAAGAGCAA
GGAGGCGCGCGAGATCATGGCCAAGCAAAAGGTGCAGGGTTACACGCCCG
ACTTCGCGTATGTGGAGAGGTCCACCTACCTGGACCTCTACATCCCTGTC
CCCGAGGGCTGAAGAAGAAAATGCAGGCGGAGATGGCCACGAAGGCTGCC
GCGGCCCCTCCAGACACCGACCACCGCGGCAAGAAGATCTTCGACCTCAA
GAGCAAGGAGGCGCGCGAGATCATGGCCAAGCAAAAGGTGCAGGGTTACA
CGCCCGACTTCGCGTATGTGGAGAGGTCCACCTACCTGGACCTCTACATC
CCTGTCCCCGAGGGTACCCGAGCGAAAGACGTTACCGTCGAGATCCACCC
GGACCGCATGCTTGTCGTGGTGAAAGGGACGGGCGTCCTGACCAAGGGAC
GGTTTCAGGGCAAGGTGGCCCTCGACGGGTGCTACTGGGTCATGTCGGAC
CTGTCCCTGGACCCTCCCGGCTCGGCGGCGCTGGGCACGCAGAACGACGA
AGTGCGCCAGGGGCCCGTCTACCGCGGAGAGACGAGCGTGCAGGTGTATC
TCGAGAAGATGAAGCCGTTCGACACGCTGTGGGAGAGCGTCTACCAGCCG
CCGGAAGACGGGGAGGGTGACGCCAGCGACAGCGCACCGCTGGCTGGGGC
GTCGGCGAGCGAGGCAGGAGCGGGGGGCGGGAGCTGAGGTACCCGAGCGA
AAGACGTTACCGTCGAGATCCACCCGGACCGCATGCTTGTCGTGGTGAAA
GGGACGGGCGTCCTGACCAAGGGACGGTTTCAGGGCAAGGTGGCCCTCGA
CGGGTGCTACTGGGTCATGTCGGACCTGTCCCTGGACCCTCCCGGCTCGG
CGGCGCTGGGCACGCAGAACGACGAAGTGCGCCAGGGGCCCGTCTACCGC
GGAGAGACGAGCGTGCAGGTGTATCTCGAGAAGATGAAGCCGTTCGACAC
GCTGTGGGAGAGCGTCTACCAGCCGCCGGAAGACGGGGAGGGTGACGCCA
GCGACAGCGCACCGCTGGCTGGGGCGTCGGCGAGCGAGGCAGGAGCGGGG
GGCGGGAGCTGA
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