mRNA_L-elsbetiae_contig9539.18522.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9539.18522.1
Unique NamemRNA_L-elsbetiae_contig9539.18522.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9539.18522.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 2.730e-119
Identity = 258/260 (99.23%), Postives = 258/260 (99.23%), Query Frame = 1
Query:   25 SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKASTGSRAYVNMDHGSLPETYD 804
            SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQG KAST SRAYVNMDHGSLPETYD
Sbjct:  399 SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGRKASTDSRAYVNMDHGSLPETYD 658          
BLAST of mRNA_L-elsbetiae_contig9539.18522.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 2.400e-94
Identity = 201/269 (74.72%), Postives = 213/269 (79.18%), Query Frame = 1
Query:    1 MPSTLSKASGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKASTGSRAYVNMDHGSLPETYDN 807
            MPSTLSKASGSVER +ATTDIDRRCGDTN TPLMVASVIGSSRVV+DLLRQGASVS+ADSDGY ALHH+VYH+HLAVS  LIEAGADL+ARPG                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     NPLLSA                   ELV+WYGTD CT+DGG LALATAASR  VDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGG  +  +RAYVNM HG+LPETYD+
Sbjct:    1 MPSTLSKASGSVERAVATTDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEARPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRANANPLLSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNINVSTRAYVNMAHGTLPETYDD 269          
BLAST of mRNA_L-elsbetiae_contig9539.18522.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 5.530e-82
Identity = 196/268 (73.13%), Postives = 204/268 (76.12%), Query Frame = 1
Query:    1 MPSTLSKASGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKASTGSRAYVNMDHGSLPETYD 804
            MPSTLSKASGS +  IATTDIDRRCG TNQTPLMVASVIGSSRVVRDLLRQGASVS+ADSDGY ALHHAVYHKHLAVSK                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   NPLLSA                   ELV+WYGTD CTSDGGALALATAASR  VDIV FLC+AGVVDTEGVALCAAIEGCSEACVYLLLRRQGG A+TG+RAYVNMDHG+LPETY+
Sbjct:  422 MPSTLSKASGSADPTIATTDIDRRCGGTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYE 689          
BLAST of mRNA_L-elsbetiae_contig9539.18522.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 2.800e-72
Identity = 207/316 (65.51%), Postives = 212/316 (67.09%), Query Frame = 1
Query:    1 MPSTLSKASGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSA-DXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAI-----------------------------------------------EGCSEACVYLLLRRQGGKASTGSRAYVNMDHGSLPETYD 804
            MPSTLSKASGS +  IATTDIDRRCGDTNQTPLMVASVIG SRVVRDLLRQGASVS+ADSDGY ALHHAVYHKHLAVSK                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LSA         XXXXXXXXXX ELVYWYG D CTSDGGALAL TAASR  VDIVTFL DAGVVDTEGVALCAAI                                               EGCSEACVYLLLRRQGG A+TG+RAYVNMDHG+LPETYD
Sbjct:    7 MPSTLSKASGSADPTIATTDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAYGSLPLYIMXXXXXXXXXXRELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGVVDTEGVALCAAIXWRCTMDIWKWSASLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYD 322          
BLAST of mRNA_L-elsbetiae_contig9539.18522.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 9.330e-54
Identity = 96/111 (86.49%), Postives = 101/111 (90.99%), Query Frame = 1
Query:    1 MPSTLSKASGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEM 333
            MPSTLSKASGS++  IATT IDR CGDTNQTPLMVASVIGSSRVVRDLLRQGASVS+ADSDG  ALHH+VYH HLAVSKDLIEAGADL+AR GG DTPLHVAATKGFCQ M
Sbjct:    1 MPSTLSKASGSIDPTIATTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGGKDTPLHVAATKGFCQGM 111          
BLAST of mRNA_L-elsbetiae_contig9539.18522.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 5.120e-41
Identity = 108/243 (44.44%), Postives = 129/243 (53.09%), Query Frame = 1
Query:  103 VASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPG-----GID-TPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSA--DXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKASTGSRAYVNMDHGSLPETYDN 807
            VAS +G  RVVR LLR GA VS AD+DG  ALH ++ +KHLAVSK L++AGADL+AR       G+  TPLHVAA KGF + M                                         NP+L+A                     EL   +G DGC+ DGGA AL  AAS+NQVDIVTFL D GVVD EG+ALCAA+EG  E C+ LLLR QG  A+  +RAY NM H +    Y N
Sbjct:   37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAGVKGFVGAKA-------------------------NPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGVVDAEGIALCAAVEGRREECIELLLRTQGCNANAIARAYANMTHDTTLPMYSN 254          
BLAST of mRNA_L-elsbetiae_contig9539.18522.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.100e-38
Identity = 101/267 (37.83%), Postives = 134/267 (50.19%), Query Frame = 1
Query:   22 ASGSVERPI-----ATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGI---------DTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKASTGSRAYVNMDH 780
            +SGSVER +       T+IDRRC +   T LM A+  G  R+VR LLR GA VS++  DG+ ALH A+  ++LAV+K LI+AGA+++A+   +          TPLH+AA +GFC+ M                                         NPLL                     ELV  +G DGC  +G   AL TAA  N   I+TFL DAGV+DT+G ALC AIEG +EAC+ LL+ R+GG      R Y N+D+
Sbjct:   26 SSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGVIDTDGTALCDAIEGRNEACLKLLVSRRGGSEHMVERNYTNIDN 292          
BLAST of mRNA_L-elsbetiae_contig9539.18522.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 4.830e-24
Identity = 90/278 (32.37%), Postives = 112/278 (40.29%), Query Frame = 1
Query:    1 MPSTLSKA-----SGSVERPI-----ATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGI---------DTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKASTGSRAYVNMD 777
            MPST S       +GSVER +       T+IDRRC +   T LM A+  G  R+VR LLR GA VS++  DG+                           +   +          TPLH+A  +GFC  M                                         NP+L                     ELV  +G DGC+ +G   AL TAA  N   I+TFL DAGV DT+G ALC AIEG SEAC+ LL+ R+GG A      Y N D
Sbjct:    1 MPSTTSTLYNAAWTGSVERTLDLLSDGFTEIDRRCEENGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXKADFLHPDQEVVQGQTPLHLATGEGFCDGMVALIDAGANVDSRMSNGSTAMYIAACTGNLDAVKILLQERANPMLCVGPTHPLDIATHGGHLGVVQELVQRFGVDGCSDEGAIGALETAAYENHQTILTFLLDAGVKDTDGTALCDAIEGRSEACLKLLVGRRGGNAHMAESHYTNTD 278          
BLAST of mRNA_L-elsbetiae_contig9539.18522.1 vs. uniprot
Match: D8LPL4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL4_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 1.920e-10
Identity = 99/237 (41.77%), Postives = 123/237 (51.90%), Query Frame = 1
Query:   91 TPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDAR---PGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCT-SDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKASTGSRAYVNMDHGSL 789
            TPLM+A+  G SR+V  LL +GA   +   +G  ALH +  + H+ VS  LI AGAD+       GG                 XXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXX  + + +                  ELV   G +GC  SDGG +AL  AA    +DI+  L + GVVD+ G+ALCAA+    E  V LLL+R     S G  +Y N   GS+
Sbjct:   48 TPLMLAADGGYSRIVSFLLHKGAIAGIMGDEGVTALHVSARNGHVVVSLMLIRAGADVGLSCFTSGGXXXXXXXXXXXXXXXXXXXXXXXXXVDRRLEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXIATMEGYVPLDVATEKFRVDIVRELVDDVGIEGCGGSDGGMVALRLAAQNGHLDILHILHERGVVDSSGLALCAALMHGGEKTVKLLLQRAAEYFSCGGSSYANSAVGSI 284          
BLAST of mRNA_L-elsbetiae_contig9539.18522.1 vs. uniprot
Match: Q8QN90_ESV1K (EsV-1-199 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN90_ESV1K)

HSP 1 Score: 69.3 bits (168), Expect = 3.450e-9
Identity = 110/237 (46.41%), Postives = 133/237 (56.12%), Query Frame = 1
Query:   91 TPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLD---ARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTS-DGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKASTGSRAYVNMDHGSL 789
            TPLM+A+  G SR+V  LL +GA   +   +G  ALH +  + H+ VS  LI AG D+    +R GG                 XXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXX     ELV   G +GC   DGG +AL  AA    +DI+  L   GVVD+ G+ALCAA+    E  V LLL+R    +S G  +Y N   G++
Sbjct:   48 TPLMLAADGGYSRIVSFLLNKGAIARIMGDEGVTALHVSAKNGHVLVSIMLIRAGVDVGLSCSRSGGYXXXXXXXXXXXXXXXXXXXXXXXXVDRCLEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDIVRELVERVGIEGCGGFDGGMVALRLAAQNGHLDILDILHKKGVVDSSGLALCAALMHGGEKTVKLLLQRSAEYSSPGGSSYANSALGAI 284          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9539.18522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1W5_9PHAE2.730e-11999.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHQ8_9PHAE2.400e-9474.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL58_9PHAE5.530e-8273.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5L0_9PHAE2.800e-7265.51Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LH66_ECTSI9.330e-5486.49EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JNS0_9PHAE5.120e-4144.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSL5_9PHAE2.100e-3837.83Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
D8LP44_ECTSI4.830e-2432.37EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LPL4_ECTSI1.920e-1041.77EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QN90_ESV1K3.450e-946.41EsV-1-199 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9539contigL-elsbetiae_contig9539:2627..3881 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score188.3
Seed ortholog evalue5.6e-45
Seed eggNOG ortholog2880.D8LH66
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1231
Cds size993
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9539.18522.1prot_L-elsbetiae_contig9539.18522.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9539 2865..3881 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817020.5248551-UTR-L-elsbetiae_contig9539:2626..28641622817020.5248551-UTR-L-elsbetiae_contig9539:2626..2864Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9539 2627..2864 -
1691683988.0072803-UTR-L-elsbetiae_contig9539:2626..28641691683988.0072803-UTR-L-elsbetiae_contig9539:2626..2864Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9539 2627..2864 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817020.5390832-CDS-L-elsbetiae_contig9539:2864..30461622817020.5390832-CDS-L-elsbetiae_contig9539:2864..3046Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9539 2865..3046 -
1691683988.0208762-CDS-L-elsbetiae_contig9539:2864..30461691683988.0208762-CDS-L-elsbetiae_contig9539:2864..3046Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9539 2865..3046 -
1622817020.5527947-CDS-L-elsbetiae_contig9539:3070..38811622817020.5527947-CDS-L-elsbetiae_contig9539:3070..3881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9539 3071..3881 -
1691683988.0325367-CDS-L-elsbetiae_contig9539:3070..38811691683988.0325367-CDS-L-elsbetiae_contig9539:3070..3881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9539 3071..3881 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9539.18522.1

>prot_L-elsbetiae_contig9539.18522.1 ID=prot_L-elsbetiae_contig9539.18522.1|Name=mRNA_L-elsbetiae_contig9539.18522.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=331bp
MPSTLSKASGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLR
QGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLH
VAATKGFCQEMVVLIDAGANVDSRLDDGATPLFEAAKDGRLEAVRVLLRA
NANPLLSADGSLPLYMAVYNGHLKVVRELVYWYGTDGCTSDGGALALATA
ASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKAST
GSRAYVNMDHGSLPETYDNSSHSIWEAFMLPDSRACYLKPGRTRHRAFGS
RATVMRGKKTKVSSARPSTWLHRTFADSVP*
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mRNA from alignment at L-elsbetiae_contig9539:2627..3881-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9539.18522.1 ID=mRNA_L-elsbetiae_contig9539.18522.1|Name=mRNA_L-elsbetiae_contig9539.18522.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1255bp|location=Sequence derived from alignment at L-elsbetiae_contig9539:2627..3881- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCATCAACTCTGAGCAAAGCCAGCGGCTCCGTCGAGCGTCCGATTGC TACGACCGACATCGACCGACGCTGTGGTGATACGAACCAGACACCGCTGA TGGTGGCCTCCGTCATTGGTTCCTCGCGCGTTGTCAGAGACCTCCTGAGG CAGGGTGCCAGCGTCTCGCTAGCGGACAGCGACGGTTATCCTGCTCTGCA CCACGCGGTGTATCACAAACACCTGGCCGTGAGCAAAGACCTGATCGAGG CGGGAGCGGACCTTGACGCGAGGCCCGGTGGCATAGATACACCACTTCAC GTGGCCGCGACGAAAGGGTTTTGCCAAGAAATGGTGGTGCTGATCGACGC AGGCGCAAATGTGGACAGCAGGCTCGACGACGGAGCAACACCGCTGTTCG AAGCGGCAAAGGACGGGCGGCTCGAAGCCGTCAGGGTTCTCCTTCGGGCG AACGCGAATCCGCTCTTGTCTGCGGACGGCAGTCTCCCGCTATATATGGC GGTTTACAATGGACACCTGAAAGTGGTCCGCGAACTTGTGTATTGGTACG GAACCGACGGCTGTACAAGCGACGGCGGCGCACTGGCTCTCGCAACGGCC GCTTCTCGCAATCAGGTGGACATCGTCACCTTCCTGTGCGATGCCGGTGT GGTTGATACGGAGGGCGTGGCCCTGTGTGCCGCCATAGAGGGATGTAGCG AGGCGTGCGTCTACCTTCTGCTGCGGAGACAGGGGGGAAAGGCCAGCACA GGTTCGCGTGCCTACGTCAATATGGACCACGGTAGTCTCCCGGAAACCTA TGACAATTCGTGTTCCAAGAAACACCGCTGGTGAGCACATTCAATCTGGG AAGCTTTCATGCTCCCAGATTCGCGCGCTTGCTACTTGAAGCCGGGGCGG ACGCGACATCGGGCGTTCGGTTCCCGTGCGACAGTGATGAGGGGGAAGAA GACGAAGGTTTCATCGGCACGCCCCTCGACTTGGCTACATCGTACTTTCG CGGATTCAGTCCCATGAGAGTCCACCGCGAGATGGTGCGGGGGCTGAAGG GTGTCATCCGCTTGCTGCGACAGGAGGAGGCAGTTCACTCGGTGTCCTGG ACGTGGCCAATCGACACAGGTCGTTCTGTAGAGCGTGCGTCCCGGAAGAA ATCAACATCGATCGCTCGCATGCTCCCGCTTCTGAAGCGGAGGGCGGCGA AGCCTCGTGTGCTCTTGGCAGCCATGTCTAGGTGCGTGGTGTTGTTTGAT TCTTC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9539:2627..3881-

>mRNA_L-elsbetiae_contig9539.18522.1 ID=mRNA_L-elsbetiae_contig9539.18522.1|Name=mRNA_L-elsbetiae_contig9539.18522.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1986bp|location=Sequence derived from alignment at L-elsbetiae_contig9539:2627..3881- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCATCAACTCTGAGCAAAGCCAGCGGCTCCGTCGAGCGTCCGATTGC
TACGACCGACATCGACCGACGCTGTGGTGATACGAACCAGACACCGCTGA
TGGTGGCCTCCGTCATTGGTTCCTCGCGCGTTGTCAGAGACCTCCTGAGG
CAGGGTGCCAGCGTCTCGCTAGCGGACAGCGACGGTTATCCTGCTCTGCA
CCACGCGGTGTATCACAAACACCTGGCCGTGAGCAAAGACCTGATCGAGG
CGGGAGCGGACCTTGACGCGAGGCCCGGTGGCATAGATACACCACTTCAC
GTGGCCGCGACGAAAGGGTTTTGCCAAGAAATGGTGGTGCTGATCGACGC
AGGCGCAAATGTGGACAGCAGGCTCGACGACGGAGCAACACCGCTGTTCG
AAGCGGCAAAGGACGGGCGGCTCGAAGCCGTCAGGGTTCTCCTTCGGGCG
AACGCGAATCCGCTCTTGTCTGCGGACGGCAGTCTCCCGCTATATATGGC
GGTTTACAATGGACACCTGAAAGTGGTCCGCGAACTTGTGTATTGGTACG
GAACCGACGGCTGTACAAGCGACGGCGGCGCACTGGCTCTCGCAACGGCC
GCTTCTCGCAATCAGGTGGACATCGTCACCTTCCTGTGCGATGCCGGTGT
GGTTGATACGGAGGGCGTGGCCCTGTGTGCCGCCATAGAGGGATGTAGCG
AGGCGTGCGTCTACCTTCTGCTGCGGAGACAGGGGGGAAAGGCCAGCACA
GGTTCGCGTGCCTACGTCAATATGGACCACGGTAGTCTCCCGGAAACCTA
TGACAATTCGTATGCCATCAACTCTGAGCAAAGCCAGCGGCTCCGTCGAG
CGTCCGATTGCTACGACCGACATCGACCGACGCTGTGGTGATACGAACCA
GACACCGCTGATGGTGGCCTCCGTCATTGGTTCCTCGCGCGTTGTCAGAG
ACCTCCTGAGGCAGGGTGCCAGCGTCTCGCTAGCGGACAGCGACGGTTAT
CCTGCTCTGCACCACGCGGTGTATCACAAACACCTGGCCGTGAGCAAAGA
CCTGATCGAGGCGGGAGCGGACCTTGACGCGAGGCCCGGTGGCATAGATA
CACCACTTCACGTGGCCGCGACGAAAGGGTTTTGCCAAGAAATGGTGGTG
CTGATCGACGCAGGCGCAAATGTGGACAGCAGGCTCGACGACGGAGCAAC
ACCGCTGTTCGAAGCGGCAAAGGACGGGCGGCTCGAAGCCGTCAGGGTTC
TCCTTCGGGCGAACGCGAATCCGCTCTTGTCTGCGGACGGCAGTCTCCCG
CTATATATGGCGGTTTACAATGGACACCTGAAAGTGGTCCGCGAACTTGT
GTATTGGTACGGAACCGACGGCTGTACAAGCGACGGCGGCGCACTGGCTC
TCGCAACGGCCGCTTCTCGCAATCAGGTGGACATCGTCACCTTCCTGTGC
GATGCCGGTGTGGTTGATACGGAGGGCGTGGCCCTGTGTGCCGCCATAGA
GGGATGTAGCGAGGCGTGCGTCTACCTTCTGCTGCGGAGACAGGGGGGAA
AGGCCAGCACAGGTTCGCGTGCCTACGTCAATATGGACCACGGTAGTCTC
CCGGAAACCTATGACAATTCGTCACATTCAATCTGGGAAGCTTTCATGCT
CCCAGATTCGCGCGCTTGCTACTTGAAGCCGGGGCGGACGCGACATCGGG
CGTTCGGTTCCCGTGCGACAGTGATGAGGGGGAAGAAGACGAAGGTTTCA
TCGGCACGCCCCTCGACTTGGCTACATCGTACTTTCGCGGATTCAGTCCC
ATGACACATTCAATCTGGGAAGCTTTCATGCTCCCAGATTCGCGCGCTTG
CTACTTGAAGCCGGGGCGGACGCGACATCGGGCGTTCGGTTCCCGTGCGA
CAGTGATGAGGGGGAAGAAGACGAAGGTTTCATCGGCACGCCCCTCGACT
TGGCTACATCGTACTTTCGCGGATTCAGTCCCATGA
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