mRNA_L-elsbetiae_contig941.18403.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig941.18403.1
Unique NamemRNA_L-elsbetiae_contig941.18403.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig941.18403.1 vs. uniprot
Match: A0A6H5KWX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX9_9PHAE)

HSP 1 Score: 660 bits (1702), Expect = 2.230e-229
Identity = 321/339 (94.69%), Postives = 325/339 (95.87%), Query Frame = 3 
Query:   48 MGDPGGSGSGRKEIYTYEAPWQIYAMGWCQRPDPAERYRLAVGSFTEEYNNKVQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSQNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCEADPATVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLAAILTDSPKTVILDIRVPSLPVAMLGGHQSAISAIAWAPHSSCHICTAGDDCQSLIWDLSCVPSSVPKAVEDPILAYTAEEQVNQLQWSARHPEWIAIAFANKMQILRV 1064
            MGD GG G GRKEIYTYEAPW IYAMGWCQR DP +RYRLAVGSFTEEYNNKVQIVQRTETSFVRTGELEHPYPPTKIMWSPDKS NS DLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWC+ADP+TVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLA ILTDS KTVILDIRVPSLPVAMLGGHQS +SAIAWAPHSSCHICTAGDDCQSLIWDLS VPSSVPKAVEDPILAYTAE QVNQLQWSA HPEWIAIAFANKMQILRV
Sbjct:    1 MGDQGGGG-GRKEIYTYEAPWHIYAMGWCQRSDPGDRYRLAVGSFTEEYNNKVQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSLNSPDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIRVPSLPVAMLGGHQSPVSAIAWAPHSSCHICTAGDDCQSLIWDLSSVPSSVPKAVEDPILAYTAEGQVNQLQWSASHPEWIAIAFANKMQILRV 338
[Close]
BLAST of mRNA_L-elsbetiae_contig941.18403.1 vs. uniprot
Match: A0A6V1NZ18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZ18_HETAK)

HSP 1 Score: 480 bits (1235), Expect = 5.270e-159
Identity = 226/346 (65.32%), Postives = 280/346 (80.92%), Query Frame = 3 
Query:   33 RGDSTMGDPGGSGSGRKEIYTYEAPWQIYAMGWCQRPDPAERYRLAVGSFTEEYNNKVQIVQRTETS--FVRTGELEHPYPPTKIMWSPDKSQNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCEADPATVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLAAILTDSPKTVILDIRVPSLPVAMLGGHQSAISAIAWAPHSSCHICTAGDDCQSLIWDLSCVPSSVPKAVEDPILAYTAEEQVNQLQWSARHPEWIAIAFANKMQILRV 1064
            +G+S M    G+ S + EIYTY+APW I++M W QR +P   +R+AVGSF EEY+NKV+I+Q+ E S  F   GE  HPYPPTKIM+SP ++  + DLLATTGDYLRLW++       V+L +LLNNN N+EYCSPLTSFDW E DP+ +GTSSIDTTCTIWDV TG  KTQLIAHDKEVYDI+FA +KDIFASVGADGSVR+FDLRSLEHSTIIYET  LTPL+RL+WNKQDPNYL  I+TDSP TV+LD+RVPS+PVA L GH++ ++AI+WAPHSSCH+CT GDD Q+LIWDLS    ++P+ +EDP+LAYTA  ++NQ+QWSA HP+W+ IA+ + MQ+LRV
Sbjct:    5 QGNSQMAMEEGNTSRKPEIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYSNKVRIIQKAENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNITGNSEEPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLS----AMPQPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV 346
[Close]
BLAST of mRNA_L-elsbetiae_contig941.18403.1 vs. uniprot
Match: D8LR84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR84_ECTSI)

HSP 1 Score: 483 bits (1242), Expect = 3.410e-158
Identity = 237/254 (93.31%), Postives = 240/254 (94.49%), Query Frame = 3 
Query:   48 MGDPGGSGSGRKEIYTYEAPWQIYAMGWCQRPDPAERYRLAVGSFTEEYNNKVQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSQNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCEADPATVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLAAILTDSPKTVILDIRV--PSLPV 803
            MGD GG G GRKEIYTYEAPWQIYAMGWCQR DP +RYRLAVGSFTEEYNNKVQIVQRTETSFVRTGELEHPYPPTKIMWSPDKS NSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWC+ADP+TVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLA ILTDS KTVILDI    P  PV
Sbjct:    1 MGDQGGGG-GRKEIYTYEAPWQIYAMGWCQRSDPGDRYRLAVGSFTEEYNNKVQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSLNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDISQLDPRAPV 253
[Close]
BLAST of mRNA_L-elsbetiae_contig941.18403.1 vs. uniprot
Match: A0A7S2Y0K5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0K5_9STRA)

HSP 1 Score: 469 bits (1207), Expect = 6.060e-155
Identity = 227/333 (68.17%), Postives = 269/333 (80.78%), Query Frame = 3 
Query:   78 RKEIYTYEAPWQIYAMGWCQRPDPAERYRLAVGSFTEEYNNKVQIVQRTETS--FVRTGELEHPYPPTKIMWSPDKSQNSTDLLATTGDYLRLWSVDEQEP-GGVKLHSLLNNNTNAEYCSPLTSFDWCEADPATVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFART-KDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLAAILTDSPKTVILDIRVPSLPVAMLGGHQSAISAIAWAPHSSCHICTAGDDCQSLIWDLSCVPSSVPKAVEDPILAYTAEEQVNQLQWSARHPEWIAIAFANKMQILRV 1064
            RKEIYTYEAPW ++A  W QR +P   +RLA+GSF EEY+NKVQ++QR E S  F   GE++H YPPTKIM+SP  S  S DL+ATTGDYLRLW +D   P   V + +LLNN  N+EYCSPLTSFDW E DP+ +GTSSIDTTCTIWD+A    +TQLIAHDK VYDIA+AR  +D+FASVG DGSVRMFDLRSLEHSTIIYET DLTPL+RL+WNKQDPNYLAAILTDS  TVI+DIRVPSLPVA LGGH++ ++ +AWAPHSSCHICT GDD Q+LIWDLS     VP+ +EDPILAY+AE +VN LQW+A  P+W++I F NK+Q+LRV
Sbjct:   10 RKEIYTYEAPWTVFASAWSQRLEPQYAFRLAIGSFLEEYSNKVQVIQRMEDSQHFSLIGEVDHSYPPTKIMFSPQASGVSRDLMATTGDYLRLWKIDSSNPLNPVTMEALLNNTKNSEYCSPLTSFDWNEVDPSILGTSSIDTTCTIWDLAAEQARTQLIAHDKAVYDIAWARGGRDVFASVGGDGSVRMFDLRSLEHSTIIYETADLTPLLRLAWNKQDPNYLAAILTDSSMTVIVDIRVPSLPVAELGGHEAPVNTMAWAPHSSCHICTGGDDSQALIWDLS----GVPQPIEDPILAYSAEAEVNNLQWAASQPDWVSICFNNKLQLLRV 338
[Close]
BLAST of mRNA_L-elsbetiae_contig941.18403.1 vs. uniprot
Match: A0A7R9U5K9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5K9_9STRA)

HSP 1 Score: 461 bits (1187), Expect = 4.420e-152
Identity = 218/329 (66.26%), Postives = 262/329 (79.64%), Query Frame = 3 
Query:   81 KEIYTYEAPWQIYAMGWCQRPDPAERYRLAVGSFTEEYNNKVQIVQR-TETSFVRTGELEHPYPPTKIMWSPDKSQNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCEADPATVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLAAILTDSPKTVILDIRVPSLPVAMLGGHQSAISAIAWAPHSSCHICTAGDDCQSLIWDLSCVPSSVPKAVEDPILAYTAEEQVNQLQWSARHPEWIAIAFANKMQILRV 1064
            +EIYT+EAPW IYAMGW Q+ D A  +RLA+GSF EEY+NKV ++Q+ T   F   G+ +HPYP TK+ W PD   +  DLLATTGDYLRLW+V E  P GV + +LLNN  + EYC+PLTSFDW EADP  +GTSSIDTTCTIWD+      TQLIAHDKEVYDIAF+R++D+FASVGADGSVR FD+RSLEHSTI++E+ DLTPL+R++WNKQDPNY+A  + DS KT+ILDIRVPSLPVA LG H   ++AIAWAPHSSCHICTA DD Q+LIWDLS +P    K VEDPILAY A+ Q+NQLQWS   P+WIAIA+ NK+Q+LRV
Sbjct:    7 REIYTFEAPWTIYAMGWSQKVDSAASFRLALGSFIEEYSNKVLLIQQDTNGDFHDIGQFDHPYPATKVQWCPDGQSSDKDLLATTGDYLRLWNVSESSPNGVSMEALLNNKIS-EYCAPLTSFDWNEADPNLIGTSSIDTTCTIWDIVKQQAVTQLIAHDKEVYDIAFSRSRDLFASVGADGSVRYFDMRSLEHSTILFESRDLTPLLRVAWNKQDPNYIATFMADSNKTIILDIRVPSLPVAELGAHHECVNAIAWAPHSSCHICTAADDVQALIWDLSVMP----KPVEDPILAYQADGQINQLQWSQVQPDWIAIAYNNKLQLLRV 330
[Close]
BLAST of mRNA_L-elsbetiae_contig941.18403.1 vs. uniprot
Match: A0A1E7FVX7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVX7_9STRA)

HSP 1 Score: 461 bits (1187), Expect = 1.590e-151
Identity = 218/343 (63.56%), Postives = 268/343 (78.13%), Query Frame = 3 
Query:   48 MGDPGGSGSGRKEIYTYEAPWQIYAMGWCQRPDPAERYRLAVGSFTEEYNNKVQIVQRTETS-----FVRTGELEHPYPPTKIMWSPDKSQNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCEADPATVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLAAILTDSPKTVILDIRVPSLPVAMLGGHQSAISAIAWAPHSSCHICTAGDDCQSLIWDLSCVPSSVPKAVEDPILAYTAEEQVNQLQWSARHPEWIAIAFANKMQILR 1061
            M D G S S RKEIYTY+APW IY++ W +RPDP  ++RLA+GS+ E+Y+N V I+++   S       +  E +HPYP TKIMWSPD    S DLLATTGDYLR+W+V +   G VK  +LLNNN  +EYC+PLTSFDW E DP+ +GTSSIDTT TIWDV T T +TQLIAHD+EV+D+AFAR KD+FASVGADGSVRMFDLRSL +STIIYE+ DL PL+RL WNKQDPNY+A  + DS KT+ILDIRVPSLPVA LGGH  +++A AWAPHSSCHICTAGDD Q+LIWDLS +P    + V+DPILAY A+ ++N LQWSA  P+W++IAF +K+QI +
Sbjct:    1 MADNGNSQSQRKEIYTYKAPWPIYSLSWSRRPDPTSQFRLAIGSYLEQYSNVVSIIKKNSASDDLGSLYQAAEFDHPYPCTKIMWSPDTRHGSQDLLATTGDYLRIWNVSDDGSGTVKKEALLNNNKTSEYCAPLTSFDWNETDPSIIGTSSIDTTVTIWDVNTSTARTQLIAHDREVFDLAFARGKDVFASVGADGSVRMFDLRSLVNSTIIYESPDLEPLLRLEWNKQDPNYMATFMGDSKKTIILDIRVPSLPVAELGGHWGSVNATAWAPHSSCHICTAGDDSQALIWDLSTMPK---RPVDDPILAYNADGEINNLQWSASQPDWVSIAFDDKLQICK 340
[Close]
BLAST of mRNA_L-elsbetiae_contig941.18403.1 vs. uniprot
Match: A0A7S2G9N6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G9N6_9STRA)

HSP 1 Score: 460 bits (1183), Expect = 1.750e-151
Identity = 217/330 (65.76%), Postives = 270/330 (81.82%), Query Frame = 3 
Query:   81 KEIYTYEAPWQIYAMGWCQRPDPAERYRLAVGSFTEEYNNKVQIVQRT-ETSFV-RTGELEHPYPPTKIMWSPDKSQNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCEADPATVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLAAILTDSPKTVILDIRVPSLPVAMLGGHQSAISAIAWAPHSSCHICTAGDDCQSLIWDLSCVPSSVPKAVEDPILAYTAEEQVNQLQWSARHPEWIAIAFANKMQILRV 1064
            KEIYTY+APW ++ + W QR +   R+RLA+GS+ EEY NKVQ+VQ+  ET  + + GE +HPYP TKIMWSP+++  +TDLLATTGDYLR+WSV+++    +K+  LLNNN   EYC+PLTSFDW EADP  +GTSSIDTTCTIWD+     KTQLIAHDKEVYDIAF++ K++FASVGADGSVR+FDLRSLEHSTIIYE+ +L PL+RL+WNKQDPNY+A +LTDSP+TVILDIRVPSLPVA LG H + ++ ++WAPHSSCHICT  DDCQ+LIWDL     S+PK ++DPILAY AE+ +NQLQWS+  P+W+AIAF  K+QILRV
Sbjct:    8 KEIYTYQAPWVVFGLAWSQRVEEKYRFRLAIGSYVEEYTNKVQLVQQNAETGQLEKIGEFDHPYPATKIMWSPERNA-TTDLLATTGDYLRIWSVNDENELSLKV--LLNNNQKNEYCAPLTSFDWNEADPNIIGTSSIDTTCTIWDLEAQVAKTQLIAHDKEVYDIAFSQGKNVFASVGADGSVRLFDLRSLEHSTIIYESENLHPLLRLAWNKQDPNYIATVLTDSPRTVILDIRVPSLPVAELGAHTACVNGVSWAPHSSCHICTCSDDCQALIWDLK----SMPKPIDDPILAYNAEDHINQLQWSSSQPDWVAIAFHRKLQILRV 330
[Close]
BLAST of mRNA_L-elsbetiae_contig941.18403.1 vs. uniprot
Match: A0A7S1FP62_9STRA (Hypothetical protein (Fragment) n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP62_9STRA)

HSP 1 Score: 457 bits (1177), Expect = 5.290e-150
Identity = 225/349 (64.47%), Postives = 271/349 (77.65%), Query Frame = 3 
Query:   48 MGDPGGSGSGRKEIYTYEAPWQIYAMGWCQR-PDPAERYRLAVGSFTEEYNNKVQIVQRT------ETSFVRTGELEHPYPPTKIMWSPDKSQNSTDLLATTGDYLRLWSV--DEQEPGGV--KLHSLLNNNTNAEYCSPLTSFDWCEADPATVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLAAILTDSPKTVILDIRVPSLPVAMLGGHQSAISAIAWAPHSSCHICTAGDDCQSLIWDLSCVPSSVPKAVEDPILAYTAEEQVNQLQWSARHPEWIAIAFANKMQILR 1061
            M  P GS   RKEIYTY+APW I+AM W QR  D   ++RLA GS+ E+Y+N VQI++RT      E  F +  E EHPYP TKI+WSPD+S    D++AT+GDYLR+W++  D  + G +  K  +LLNNN N+EYC+PLTSFDW E DP  VGTSSIDTTCTIWD+ TG  KTQLIAHDKEV+DIAFAR KD+FASVGADGSVRMFDLRSLEHSTIIYE+  L PL+RL WNKQDPNYL+  + DS KT+ILDIRVPSLPVA LGGH   ++AIAWAPHSSCHIC+ GDD Q+LIWDLS     +PK VEDPILAY A++++N LQWSA  P+W++IAFA+K+QI +
Sbjct:    1 MSHPPGSAP-RKEIYTYQAPWTIFAMSWSQRRQDSNTQFRLAAGSYVEQYSNSVQIIKRTYGTDSHEGRFYKACEFEHPYPCTKILWSPDQSTGGRDIVATSGDYLRVWNLTDDGHQRGTLIPKKEALLNNNKNSEYCAPLTSFDWNETDPTIVGTSSIDTTCTIWDIQTGAAKTQLIAHDKEVFDIAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPQLDPLLRLCWNKQDPNYLSTFMVDSYKTIILDIRVPSLPVAELGGHSGCVNAIAWAPHSSCHICSTGDDAQALIWDLS----PMPKPVEDPILAYNADQEINSLQWSAAQPDWVSIAFADKLQICK 344
[Close]
BLAST of mRNA_L-elsbetiae_contig941.18403.1 vs. uniprot
Match: A0A835ZHY0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY0_9STRA)

HSP 1 Score: 452 bits (1164), Expect = 1.430e-148
Identity = 215/334 (64.37%), Postives = 257/334 (76.95%), Query Frame = 3 
Query:   81 KEIYTYEAPWQIYAMGWCQRPDPAERYRLAVGSFTEEYNNKVQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSQNSTDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTN------AEYCSPLTSFDWCEADPATVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLAAILTDSPKTVILDIRVPSLPVAMLGGHQSAISAIAWAPHSSCHICTAGDDCQSLIWDLSCVPSSVPKAVEDPILAYTAEEQVNQLQWSARHPEWIAIAFANKMQILRV 1064
            +EIYTYEAPW IY + W +R +    YRLAVGSF EE+ N V IVQ+ E+ F + GE    YPPTK+MW+P K   + DL+AT+ D L+LW V +  P GV+LH+ L    +       EYCSPLTSFDW EADP  +GTSSIDTTCTIWDV  G P+TQLIAHDKEV+D+AF+R K++FASVGADGSVRMFDLRSLEHSTIIYET DLTPL+RL+WNKQDPNY+A I+ DS K V+LDIRVPS+PVA L  H + ++A+AWAPHSSCHICT GDD Q+LIWD S   S++ K V++PILAY AE +VN LQWSA HPEWIAIAF  KMQIL +
Sbjct:    5 REIYTYEAPWMIYGLAWSRREEQHLGYRLAVGSFMEEFKNSVHIVQKGESGFNKIGEFAQTYPPTKLMWNPAKGAGTKDLIATSADNLQLWEVSDAAPNGVQLHAQLAQKGDDKGGGAQEYCSPLTSFDWSEADPNIIGTSSIDTTCTIWDVTVGVPRTQLIAHDKEVFDMAFSRDKEVFASVGADGSVRMFDLRSLEHSTIIYETPDLTPLLRLAWNKQDPNYVATIMVDSSKGVVLDIRVPSVPVAELESHMACVNAVAWAPHSSCHICTVGDDAQALIWDTS---SAIAKRVQEPILAYNAEAEVNSLQWSASHPEWIAIAFDRKMQILHI 335
[Close]
BLAST of mRNA_L-elsbetiae_contig941.18403.1 vs. uniprot
Match: F0Y4A6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4A6_AURAN)

HSP 1 Score: 454 bits (1168), Expect = 2.040e-148
Identity = 224/368 (60.87%), Postives = 270/368 (73.37%), Query Frame = 3 
Query:   78 RKEIYTYEAPWQIYAMGWCQRPDPAERYRLAVGSFTEEYNNKVQIVQR--------------------------------TETSFVRTGELEHPYPPTKIMWSPDKSQNSTDLLATTGDYLRLWSV-------DEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCEADPATVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLAAILTDSPKTVILDIRVPSLPVAMLGGHQSAISAIAWAPHSSCHICTAGDDCQSLIWDLSCVPSSVPKAVEDPILAYTAEEQVNQLQWSARHPEWIAIAFANKMQILRV 1064
            +KEIYT++A W IYAM W QR +P   +RLA+GSF EEY N+V IVQR                                +E +FV  GE EHPYP TKIMWSPD++    DLLATTGDYLR+WSV       D +    V++ +LLNNN N+EYC+PLTSFDW + +P+ VGTSSIDTTCTIWD++    KTQLIAHDKEVYDIAFAR KDIFASVGADGSVR+FDLR+LEHSTIIYET  L PL+RL+WNKQDPNYLAAIL D P+TVILD+RVPS+PVA LG HQ+ +++IAWAPHSSCH+CT  DD Q+LIWDL+    ++PK ++DPILAYTA+ +VNQLQWS  H EW+AIA+   MQ+L V
Sbjct:   22 KKEIYTHDADWTIYAMAWSQRDEPERGFRLALGSFVEEYANRVSIVQRRDAYEKCVGTGVGRDRTAAALQRAHNPGKAADSEAAFVTVGEFEHPYPATKIMWSPDRTSRR-DLLATTGDYLRVWSVPDQREASDAESASSVEMVALLNNNKNSEYCAPLTSFDWNDTEPSLVGTSSIDTTCTIWDLSVPAVKTQLIAHDKEVYDIAFARGKDIFASVGADGSVRLFDLRTLEHSTIIYETSSLRPLLRLAWNKQDPNYLAAILADDPRTVILDVRVPSIPVAELGAHQACVNSIAWAPHSSCHLCTCSDDNQALIWDLT----AMPKPIDDPILAYTADAEVNQLQWSTAHHEWVAIAYNTTMQMLHV 384
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig941.18403.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWX9_9PHAE2.230e-22994.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1NZ18_HETAK5.270e-15965.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LR84_ECTSI3.410e-15893.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2Y0K5_9STRA6.060e-15568.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9U5K9_9STRA4.420e-15266.26Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A1E7FVX7_9STRA1.590e-15163.56Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2G9N6_9STRA1.750e-15165.76Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1FP62_9STRA5.290e-15064.47Hypothetical protein (Fragment) n=2 Tax=Corethron ... [more]
A0A835ZHY0_9STRA1.430e-14864.37WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
F0Y4A6_AURAN2.040e-14860.87Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig941contigL-elsbetiae_contig941:11977..21304 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.4
Seed ortholog evalue8.6e-134
Seed eggNOG ortholog2880.D8LR84
Preferred nameDCAF7
KEGG koko:K11805
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006275,GO:0006464,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0007346,GO:0007399,GO:0007517,GO:0008150,GO:0008152,GO:0008361,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009966,GO:0009968,GO:0009987,GO:0010556,GO:0010564,GO:0010646,GO:0010648,GO:0010769,GO:0010975,GO:0016043,GO:0016363,GO:0016604,GO:0017016,GO:0017048,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019904,GO:0022008,GO:0022603,GO:0022604,GO:0023051,GO:0023057,GO:0030100,GO:0030154,GO:0030274,GO:0030334,GO:0030336,GO:0030516,GO:0031267,GO:0031323,GO:0031326,GO:0031344,GO:0031461,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032535,GO:0032879,GO:0032991,GO:0033262,GO:0034399,GO:0035330,GO:0035331,GO:0036211,GO:0040008,GO:0040012,GO:0040013,GO:0042692,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045445,GO:0045595,GO:0045664,GO:0045806,GO:0045927,GO:0048365,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048627,GO:0048638,GO:0048699,GO:0048731,GO:0048747,GO:0048856,GO:0048869,GO:0050764,GO:0050765,GO:0050767,GO:0050770,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051051,GO:0051052,GO:0051128,GO:0051129,GO:0051146,GO:0051171,GO:0051239,GO:0051270,GO:0051271,GO:0051336,GO:0051726,GO:0051960,GO:0055001,GO:0055002,GO:0060099,GO:0060101,GO:0060255,GO:0060284,GO:0060627,GO:0061061,GO:0061387,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0080008,GO:0080090,GO:0090066,GO:0090329,GO:0120035,GO:1901564,GO:1902494,GO:1902531,GO:1902532,GO:1903463,GO:1905153,GO:1905154,GO:1990234,GO:2000026,GO:2000112,GO:2000145,GO:2000146
EggNOG free text desc.epidermal cell fate specification
EggNOG OGsKOG0290@1,KOG0290@2759
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Exons8
Model size2902
Cds size1020
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig941.18403.1prot_L-elsbetiae_contig941.18403.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig941 13812..21257 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817009.7177405-UTR-L-elsbetiae_contig941:11976..138111622817009.7177405-UTR-L-elsbetiae_contig941:11976..13811Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig941 11977..13811 -
1691683980.0710902-UTR-L-elsbetiae_contig941:11976..138111691683980.0710902-UTR-L-elsbetiae_contig941:11976..13811Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig941 11977..13811 -
1622817009.8203263-UTR-L-elsbetiae_contig941:21257..213041622817009.8203263-UTR-L-elsbetiae_contig941:21257..21304Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig941 21258..21304 -
1691683980.1826074-UTR-L-elsbetiae_contig941:21257..213041691683980.1826074-UTR-L-elsbetiae_contig941:21257..21304Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig941 21258..21304 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817009.7289371-CDS-L-elsbetiae_contig941:13811..139981622817009.7289371-CDS-L-elsbetiae_contig941:13811..13998Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 13812..13998 -
1691683980.082347-CDS-L-elsbetiae_contig941:13811..139981691683980.082347-CDS-L-elsbetiae_contig941:13811..13998Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 13812..13998 -
1622817009.7390814-CDS-L-elsbetiae_contig941:14988..150841622817009.7390814-CDS-L-elsbetiae_contig941:14988..15084Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 14989..15084 -
1691683980.0913832-CDS-L-elsbetiae_contig941:14988..150841691683980.0913832-CDS-L-elsbetiae_contig941:14988..15084Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 14989..15084 -
1622817009.7515335-CDS-L-elsbetiae_contig941:16374..165721622817009.7515335-CDS-L-elsbetiae_contig941:16374..16572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 16375..16572 -
1691683980.1017284-CDS-L-elsbetiae_contig941:16374..165721691683980.1017284-CDS-L-elsbetiae_contig941:16374..16572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 16375..16572 -
1622817009.7655444-CDS-L-elsbetiae_contig941:17218..172831622817009.7655444-CDS-L-elsbetiae_contig941:17218..17283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 17219..17283 -
1691683980.1118689-CDS-L-elsbetiae_contig941:17218..172831691683980.1118689-CDS-L-elsbetiae_contig941:17218..17283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 17219..17283 -
1622817009.7761576-CDS-L-elsbetiae_contig941:18036..181501622817009.7761576-CDS-L-elsbetiae_contig941:18036..18150Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 18037..18150 -
1691683980.1296318-CDS-L-elsbetiae_contig941:18036..181501691683980.1296318-CDS-L-elsbetiae_contig941:18036..18150Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 18037..18150 -
1622817009.786633-CDS-L-elsbetiae_contig941:18505..185791622817009.786633-CDS-L-elsbetiae_contig941:18505..18579Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 18506..18579 -
1691683980.1422832-CDS-L-elsbetiae_contig941:18505..185791691683980.1422832-CDS-L-elsbetiae_contig941:18505..18579Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 18506..18579 -
1622817009.798782-CDS-L-elsbetiae_contig941:18889..190131622817009.798782-CDS-L-elsbetiae_contig941:18889..19013Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 18890..19013 -
1691683980.1562324-CDS-L-elsbetiae_contig941:18889..190131691683980.1562324-CDS-L-elsbetiae_contig941:18889..19013Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 18890..19013 -
1622817009.8092895-CDS-L-elsbetiae_contig941:21095..212571622817009.8092895-CDS-L-elsbetiae_contig941:21095..21257Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 21096..21257 -
1691683980.171887-CDS-L-elsbetiae_contig941:21095..212571691683980.171887-CDS-L-elsbetiae_contig941:21095..21257Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig941 21096..21257 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig941.18403.1

>prot_L-elsbetiae_contig941.18403.1 ID=prot_L-elsbetiae_contig941.18403.1|Name=mRNA_L-elsbetiae_contig941.18403.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=340bp
MGDPGGSGSGRKEIYTYEAPWQIYAMGWCQRPDPAERYRLAVGSFTEEYN
NKVQIVQRTETSFVRTGELEHPYPPTKIMWSPDKSQNSTDLLATTGDYLR
LWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCEADPATVGTSSIDT
TCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLR
SLEHSTIIYETHDLTPLMRLSWNKQDPNYLAAILTDSPKTVILDIRVPSL
PVAMLGGHQSAISAIAWAPHSSCHICTAGDDCQSLIWDLSCVPSSVPKAV
EDPILAYTAEEQVNQLQWSARHPEWIAIAFANKMQILRV*
back to top

mRNA from alignment at L-elsbetiae_contig941:11977..21304-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig941.18403.1 ID=mRNA_L-elsbetiae_contig941.18403.1|Name=mRNA_L-elsbetiae_contig941.18403.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9328bp|location=Sequence derived from alignment at L-elsbetiae_contig941:11977..21304- (Laminarionema elsbetiae ELsaHSoW15)
AGGTGACAACACACGAGAGGGGGGGAGGAGGGAGAGGCGATTCTACGATG
GGGGACCCGGGCGGGAGCGGCAGCGGGCGCAAGGAGATCTACACATACGA
GGCACCATGGCAGATCTACGCCATGGGGTGGTGTCAGAGGCCGGACCCTG
CGGAGAGGTATCGCCTCGCCGTCGGCAGCTTCACGGAGGAGTACAACAAC
AAGGTTCAGGTCCGTTCTCCAACACTATATAGACTTCATACAACGGGCCC
CCAAGGATGTTTTGGGCTGAACAAAGAGCTCATGTGAGAAACAACAGCAA
CAACAGCGGTACTATAAGTCAGTAGACTAGCGGAATAGATGCTGTCGCGA
AAAAGTTCCCTATTCATCTATGCTGAAAGATAAATCAGATCATCAAAACG
GAAGCTACAGTAGTAGCCCACATTGGAGACGGGACTCGGACTCGGTGGCG
TTCAACCGGTATTCCACATAGTGACGTAACATTAGCACTACCAAAAGTCA
GCGGTATGTTGTACATCCTATGCATACGTACCTGCGAAAAAAGAAAAAAG
TCGGTGCAAGAGGACTGCTTTTGCAGGCAGACACGCGAGCCCTTTTTCTG
ACCGTCCTCCCAGATTTCAGTGGCACAAAATCGGCTGTATATTTATTTCT
CCGTAGAGACAGACGTAAGATAACACCCCCCTCTCCCCGCCCCAAGCAAA
ATACAATACAGATAGAACAACAGCATGTTATAATACAGATAGCGCAACAG
CATGTTATGTTTCGGTTTCTCTTCTGTATTGTTGTTTGTTTGGGGCGAGG
GGGGGTGTTATCTTACGTCTGGGGTTTCTACCGTCTGTATGTATGTACCT
TTACATGTATGTTGTCTTCACATTAAAAACCGTTCCGATCTCTCTATCCA
GTACCTCTCAATGTGCGTACTAATCCAACACTTGATGCGGTCAATCCCCG
TTGTCAAAGGCTAACTTATACCCAAGAAAAGGTACACGAAAAATAAAATG
GGCCCGAAGGGCCAGCAAAGCAATAATAAAACGGATATCGAATCTGGAGC
CCTTCGCTCCCCTCTACACGCTATGTGAGGTAAAACAAAACTGGAACAGC
CAACACCACTATCTTGGTACCGCAACAATATACATATATAGGTAATACTC
CTACGATAGTGTATCGTTTTACATGTGTATGTGTGTGTGTGTGTGTGTCC
TTCCCATTCATTTTGGTGACAGTCCCCCCAAGTGGAGACGTATAGATACA
CAGTATTTTAGCCTGGGGCGGCGGGGGGGGGGTTGCAAGTGTCTGTGTTT
CCATTGGCTGGGCGTGTGGGACTGCCGTATACGACACAAGATAACACACC
CCCTGCTGGACCGATTTACATAGCTCGGTTACTCGGCAGCGAGTAGACCA
TGATTCTAAAACCAAAAGAGGACACGTTTTCGGACAGCTCTTGATGGGAT
CCTTCCAACGCCGCCCTTTTTCGGGACTGTCATGACACTGTTCTCGCTGT
GTTTTCATTCGCTGGACGTTTGGTACTACGTACATGCATACATACATACC
GAAGTACATAAAAAATACATAAACGAATCATGACATACATATGCACATTC
ATCACGGAGCCCCTGTGTGATCGGAAGCCATGTACTGAAATCGGTTGCGC
GGGCAGCACTAGGGCAGGCGGGCGGGCGGGGGCACGCGGGGGGTGTATTT
TCGTATGTTACGTGGTTCCACTGCGATCGAGGTTGCGCACGTGTGAACAA
CATGCCGTCTGAAATATGCTGGACGTTTTACCGAGGGTAAGTTAAGTGCA
TGCATGCACTGCTCTGCTACAACACACGGGGCGTTGCAGAACTTTAGGTT
TATGTGTATGCCTCCAGACTTCGACCTTACCGTCGACTGCTGGAGAGAGG
GGCGGCTGAACCTTTCTCGTGACCAAAATGTTAGGCATGCACCGCAGAAG
GCGGGAGTGGGGAGAGGAACCTTTCTGTGTGACCACGGTTCAGGCTTCTG
GCGAAGATGCCCTCGTGGCAAGGGAGCCAGCCCGTCGAGCACTCTGGAAA
TAAATGTCAAACAAAAAAAACTCAAACGCCCCCCCCCCCCCCCCCCCCCC
CGACACAACACAAAACGGCCCACACCCAAACCGAAGCCCTCCCCCCCTAC
CCNNNNNNNNNNCCCGGTTCCGGGTTTGGGGGAAAAGCCCCTCGGGGCAA
GGGAGCCCCCCCCGCGAGCCCTCCGGAAAAAAATGTCAAAAAAAAAAAAC
CCAAACCCCCCCCCCCCCCCCCCGTTCTGATGAAATTCCAGATTGTGCAG
CGAACGGAGACTTCTTTCGTCCGAACGGGGGAGCTGGAGCACCCCTACCC
GCCCACGAAGATAATGTGGTCTCCCGACAAGTCGCAGAACAGCACAGACC
TGCTGGCTACTACGGGTGGGTTCGGGTGGGGATGGTGGTGGCTGTGATCT
CGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTG
GGGCGATGTTATTGTTGTCGTTGTTGGTGTCGGGGGTGGTGGGGGCTGTG
ATCGCTGTTGGTGTTGTTGCTGCTGCTAGATTGGGGGGCGTTGTTGTTGA
GTTGTTGTTGTTGATGATATTGCTCTCGTTGACGATGGAGTCTGTACCAA
CCCGCCGGTGTTTCCCCTTGGTTTCGTGGCTGGACTCGACACTGCGGCTG
TGACTCGACACTTCTGCTGTGCCAGGGGACTACCTGCGATTGTGGAGCGT
GGACGAGCAGGAACCGGGCGGCGTGAAGCTGCATTCTCTCCTCAACAATG
TGAGCCTTGGGCACTTGCGGTTGACCGTGCCATGCCCACTTCTGCCGCTA
GCCTCGATCGACAAATTATGTGGAGTATGTACTGCATACATAGTTGTTAC
AGACGGTGTGTGTGTGTGTGTGTGTGTGCTTCGGGTGTAATGGTGTTCTT
CTTTGAGTTTGCTTTTCATCTGTTTTGATTTCTGATAAGGGGATTTAGTG
ATGCTTTACAACCCGTTGTTTTAATGGCATGTTTTGCGCTGTGTTTAGCA
CCCGCGTAAAACCTCACCCCCCCCCCTCCCCTTTGCGACGCTGGCGGCGC
CCCCTCCTGTCCGATCCCCGGTGTCCGATATTCCGCGTTCCGTTTGCGAA
TCAGAACACAAACGCGGAGTACTGTTCGCCGCTGACGTCGTTTGATTGGT
GCGAGGCTGACCCGGCAACCGTGGGCACGTCGAGCATCGATACGACCTGC
ACCATCTGGGATGTTGCGGTGAGTGTGTTTTGCGGCTCCATACCGGCCCT
GGCGTCTGTCTGTGTCCGCTGTTCAATACATCCGTCCAGGCAAAGATAAG
GGGTGCTGTGGTTTGGATTTTAGAGTGTTTTATTCTCCTGTGCTGTTTTG
TTTTGTCATTTTTCCGTTTTTTTCCCCTCAGCAACGGCGCGGGGATAGAC
CATGCAGTGCCGGCGAGCACGAGTACAGAAATACACACGACCAGTAATAT
AGGCGAAACCTAGTTGTTGTTTTTTTTTTTTTTGTAGTCGTGTTGATTGC
TGCTCGAAGTCAGTGTATGCCGCACTACCATTCGTAGCAGCAGCAAGTGG
CAAATGACGTCTCGGTTTTCTCACGCCACCACCCGGAGGGTCTCGAGTTC
TCAAGTGTGGTTCGCGCCCCTACGCATGCGTCTTGGGGTCAGAGCTGAGA
GAGGAGAGAGCGAGAGAGAGGGAAAAATAAACCGGGCCCGGGAAGTGAGT
GCTGGGGGGGGTGTCCTAGTTTTAAGCGCCGACAGCGCTTGGTTCCGGTT
GCCTCCACTTTGAAGTGCCGGGGGGCATCATCAATCATTCCTCTTGTTGT
GCGGCTTCGTGTGTGAGGAAAGGAGCCACGGGACGTTCGTTCCCATCCCC
GTTGTATATAGTATGGTATGATATGATAGCTTGACGCGACTCTTGAGATT
CCGTGCTTGCCTTTACCCCCTGCGGCGTCTCCTGCCCTGCGTCGCCCCCT
CTGCTCGCCCGGCTCGCTTAGACCGGGACGCCGAAAACACAGCTCATCGC
CCACGACAAGGAGGTGTACGACATCGCCTTCGCAAGGTGTGCGTTGTCTT
CGCGTTAAAAACCGTTCCGATCTCTCTTATCCAATACTCCTCCATGAGTC
CGTACTAATCCAACACTGACGCGGTTGATTCCCGTGGTCACAGGATAACT
TACCCTAAAAGGGGTAAGATGTGGGAATAACCAACGTCCTTGGCCAAGAG
CTAGGAGCATGTTTTGATTTGGATCGTTAGTTATGCCACGCCACGCCCTC
GTCGGATGCTTGTCTGTTCTGATACAGTAGATCGGGTTAACCTCACGAGG
GTCCTGATGAATCCGCGTACTGTTTATCCATGTATCCTCCTGAGTAGATA
CGTAGAAAAGATGGGCACGCTGGCGTCTACAGCAACTTTTGGAGGATGCG
ACACGTATGGGCGTGTTTTTTTGCTCCACGTCTGTGTGGCGTATTCGACG
ATAAACAAGTGTTCGGCATGTAGGTGCACGCTTCTTTCGGGCATGATTTG
TGTGTGTGTGTGTGCGTTTTTTTGTCTTTTTCACATTTATTTCCAGCGCT
CGATGGGCTCCTTGTCACGAGGACATCTTGCCAGAGTCCTGAACCGTGGT
TTGATGATGTGAGCTGGCTTTGATGCGTGCGTTGTGCTTGTGTGTTTGAT
GTGGTGGTCGACCTTTTGCGGCACGAGAGCAGGACGAAGGACATATTCGC
GTCCGTGGGCGCCGACGGCAGCGTCCGCATGTTCGACCTCCGTTCACTCG
AGCACTCCACCATCATCTACGAGACGCACGACTTGACGCCGCTCATGCGC
CTCAGCTGGAACAAACAAGACCCCAACTACCTGGCCGCTATCCTCACCGA
CTCCCCCAAGACAGTCATCCTTGACATCAGGTACGTACGTGCCGTAATCG
TCTCTTGAGTTCCCCACGAGACATAATTTCTATGGCACATTTTTCGAGGC
CAAGGTTAAGGTTCTTCGGGTCCATTTTGTGTCTCTTTATTTTTCATGTT
TTCAGTATGTCTTTACCCTTTCTGGGGTAAGTTGTCCCGCGACCACGGGA
ATCAACCGCGTCAGTGTTGGATTGGTACGGACTCATGGAGGTGTACTGGA
TACATACAGAGATCGGAACGGTTATTAGTGTGAAGACAACAACAACAACA
ACAACAACAAGTTTCTACCTAATGGGGGAGGGGGTTGCTGCCGCCGAGCG
ATACGCCCTTGGAAGGATATCGCCGAGATATTTCCACATACGTATACCAT
ACTGTAGTCAATCGTATCCTCTCGGTTGTGGAGAAAACCAGCTTTGAACA
TTGTTTTTTCATCCTGGGGGGAACTAACTCAAGAGACGATTACGGTAGGG
ACGCTTGGGTGGGGGGCGCCGTGCGTCTCGCGGTGTTGGATATCCTGGGT
GCGAGTTGTGCGTGCCCCATCTCTTTCTCTCTCTCGGCCCCGAGCGTGTG
GTTGATTGATTTATGTTTGGGGCTGCTTGCTGGGCTGGGTTCGTACTGTG
GACACCATTTGATGTGTCACGTTTTGGCAGATTCAGGGCTGATGAGACCC
ATCCTGCGGGCGGAGGGATTCAGCCTTGTCTACCTGTGCTGATGCCAGCG
AAGTAGATCCCCGCCCATACCCCCACTACTACTCCTCTACGGTGAATCGC
CGTCAAGAGTAAAAGGCGTACTTAGAAGTATCAGTATACCTGGTGGTGGT
CGCGACGATATGGAATGCGACCTGGTATTTTTTCCCGGCTGCCGTGCCAA
AGTCCAGCTTTCCACTCCTCGGCAGTTTAGAGCCGAGGTCAACGTTTTGC
AGATCGGATCGATCAGCGCAAATCCAGCGTGGTTGGTATTGTAGCGTGGT
GTATTTTCTGTGTCAAGTTCCTCCGTACATACTCCTGCTAAATAAATACT
CACACGGCAGCAGTATCGACGTCTTGCCATCTTCGGCCTCTTCGCCTTCT
TAGATATGTCTTGTGTGTCTGTGTTTCTGTATGTGTGTCTGTCTCTGTGT
CTGTGTGTGTGTGTTTCTGTCCGACTGCATCTCTCTGTCTGCCTCTCTGT
CTGCCTCTCTATCTCTCTCTCTATCTCGCCGCCTCTCTTACCTCTCTCGT
ACCTCTCTCTCTCTCTTCTCTCTCTGTCTCTATCTGGCTGCCTCTGCTTC
TCCATCTGTCCACTCCACAGAGTACCGTCGTTACCAGTTGCGATGCTCGG
AGGCCACCAATCAGCGATCAGCGCCATCGCGTGGGCGCCTCACTCATCTT
GCCATATCTGCACAGCGTGAGTGTATTTTAGCTGGAGGTGTTGGTAGCGG
GTGGTGATGAGCATGTTGCGGGAGAAGGAAGGGGTGTACCGCTGCGGCGA
TATCCCGTTGCTGCCGCTGCTCTCAAACGCCAGCGGTGCTCCATGATGGT
TTGCAGCGCCGCCGTGTCATGAGAGGTCTTACATGCGCTGCTGTGAGGCC
TCGGCCCCGTGTCGTGCACCTTTAGTCTCGCCTCTTCTCTGTCGAGGAAA
TCGATATGTGTAGGTGGCTGTACCATCGCTGCATGGCACGCGCAGACGAG
TTCAAGACGGGATCGTTTTCTCTGGGTGTGCAGTGCTTCATGTTACTTTT
TTTTGTGTGCATGCTGGCTTGGGTAGGCTTGCACTAGACCCGGTGTGCCC
ACTTTTGGGGATATATGTATGCTGCGCGCACGCGGCCCTTATCCAACGTG
CAGCGCTCCTTCGCCCCCTTGGGGGTCGCGGTATTTTGACCATGACCATG
CGGTGCACCACAAGGAGTTGCAATGCACTCGAGCCATATGTCACCTATCA
TCTCGGTCGTTGACGCGAAGGACACGCATGGTCGTTTTCAGCCCTTCCCT
TTTGACAACGTGTTTGTACATATAGATGTGTGTCTATAGTGTTTTGCCTT
CTTTTTTCGCCATGTACTGCCCACCACCGCCACCACCACTGCCTGGCCCC
TCTCCCCGCTGAAACAGCACGGTGCCCCCAATTCGCTGCTATTTGCGGGG
CCCTCTCTGTCCCCCGCTCCCACTAACTGCTGCCTCTCCCGCCTCGTTTT
TTTCTTCAAAAGTGTTGGCACCGCCCTGTGAGAAAAGCCAGCGAAAAATG
GTCGCTCTCTTATTAACGCCCCAATGGTTGGTAGCAAAGTATACATACAG
CGTGTGCCCTTACGGATGGCAAGCAGCGTAAATATCTAAAAAGGTTGACT
GACAAAAGCCAGTCCGCGTCTCTCCCTCCGCCGCTCGCGTCCTTTTTTCC
CAACAGAGGGGACGACTGCCAGTCCCTCATCTGGGACCTGTCGTGCGTGC
CGTCTTCGGTCCCCAAGGCCGTGGAGGACCCCATCCTCGCCTACACCGCC
GAGGAGCAGGTGAACCAGCTGCAGTGGTCGGCGAGGCATCCGGAGTGGAT
CGCGATCGCCTTCGCCAACAAGATGCAGATCTTGAGGGTCTGAGCTGGAC
CTAAATACCTGCAGAATAGGCTTTCTGCAATAGAGCCCCCGATCCTAAAA
AAAGAGCTGCGGGACCAGCGGGGGGGGGGGGGGTATTTATCTAGGAAATA
GAGTGAAAAATCCCCCACGGTGCCGCTTTTTCAGGATTGGGGGCTCTGCT
GCAGGAAGCCTACACAGCAGCCAGTACCTGGCTTAATCATCTTAACCCCA
TAGAGTTGGTTGTACTACTCCCTCTCTCTCTCTCTGGGCAGTTACTGGGG
GTCCGTGCGATGCTCGCGCGAACGTTGTTTTGGTGCTTCGGTGTTTTTTG
AGAGAGGGGTCATCTTTTTTGTGCGCGCGTGCATGTACGAGGCATCAGTA
CGGCTGTATGTATACACTGCTCGCATCTATCTGGTGACCGACCAGGCCGC
GCCAGAGCACATGCAGTCTACTTTGTTGGGTGTTGGGGGTGTTCTGTCGT
GACGTCACCGAACCAGCCCTTCTTCCCTCCCCTCGGACTGTGTCCGCCAG
CTATTTAGCGGTGTCCGGTTTTGTGCTCATCGGCGAAAGAAAACGGCATC
ACAGACAGAGTTTTGACACAGAGTAACGATACCGCTGCTGTGGCGGCGGG
GCGGTAGGGTTTAGGGTTGTCCACGGCGGTGTCCGCCGTGGCTGCGGCGG
TGGCGGCGACGGCGGCGGCGGCGGCGGCAGTAACGGTACTGCTGTGGTGG
CGGCTGCAGTAGCGACGTCGGCACTTCCGAGGCCGCCGAGGGCTTATCTC
TACGGGTAGGGGGGGGCAGGTCGCATGTGACGTAGTCTAGTCTAGTCTAG
TCTGGTGTAGAGGTTGGGGCCGAGAGGAGGGTCCCGTTTGGATGCTGCAG
CAGCAGACCCTACTGCCAAGAACTGGTTCTAAGTCAGAGCTGCTGGTTCC
GAAGGTGGTGTGTAGATACCAAACATTTTGCCTGGAGGCCGGTCCCCCGC
CGTCCAGATGGGATGCCGGGTACGTGCGTATATCGGGGTGCCGGGGGGGC
AGTTGGAAGGGCCTTGTTGAGCTGTTGCGGTTTATGTTCTGGGATATGTA
CGACCCACGTCCATTTGGCGTGTGGGTCACCCGATGTGCCTTGGGCGTCA
GGCAAGAAAAGGTGTACCATACTTTGGATTAGATGCTGCGTCTTTAGCTT
CTAGCGTTTGGACTGCTGGCAAACCGGTCTCTTTTCGTGATCAAGGCTTG
TTTCGTCCCCCCCCCCCCCGTACTTGCTTGGGCACGCGTGACGCTTACCT
ACTTTTATTGCCCTGCGGCACTACTCCGTAGGGGGGGCTTTCTCCAGCGA
ATCTTGAGTAAATGTAAACCTTATGCGCCTGGCGGTGGCCCCGCTGCTGT
CGTTTTCCTGATTGGTTGTCAGACGATTGGGGAGGGAGGGGGGCGGGGAG
CAGTGCACTTTTTTTCATGTTCTTTTCGTTCTGACCGCTCTCTCTTTATT
GATTCCTTCGAGGCAGAGCGCCGTCTTTGCTCCTAAAACGTGCAGCAGAA
TAGCAGCTTTGCGCGGGGGAATAGACAGAGCATGTGTATCGCACACGCGA
CGACCCCGTTGTCACTTTTGGGTGAATGCGTGAGTCAAACTGCATATTAC
ACTGTTTATTTAGTAGATGTAGGCTTTTATAATAGTGAAGCAGCCCTCTC
TACTGCTGTAGTGCGTGCAGTAAGGGTAGGAGGGAGTCTTGGACCAGGGA
CTCGCCTACGAATGTACATAAGAGTTGATTAATCGACGTGACCGCAGCTT
TAACAATATATCTGAAAGGTTTGTCTACGAACTTTTTTTCGTACTTTTGA
AAATAAACCAGAGAGCCAAAGAGGGAAC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig941:11977..21304-

>mRNA_L-elsbetiae_contig941.18403.1 ID=mRNA_L-elsbetiae_contig941.18403.1|Name=mRNA_L-elsbetiae_contig941.18403.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2040bp|location=Sequence derived from alignment at L-elsbetiae_contig941:11977..21304- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGGGACCCGGGCGGGAGCGGCAGCGGGCGCAAGGAGATCTACACATA
CGAGGCACCATGGCAGATCTACGCCATGGGGTGGTGTCAGAGGCCGGACC
CTGCGGAGAGGTATCGCCTCGCCGTCGGCAGCTTCACGGAGGAGTACAAC
AACAAGGTTCAGATGGGGGACCCGGGCGGGAGCGGCAGCGGGCGCAAGGA
GATCTACACATACGAGGCACCATGGCAGATCTACGCCATGGGGTGGTGTC
AGAGGCCGGACCCTGCGGAGAGGTATCGCCTCGCCGTCGGCAGCTTCACG
GAGGAGTACAACAACAAGGTTCAGATTGTGCAGCGAACGGAGACTTCTTT
CGTCCGAACGGGGGAGCTGGAGCACCCCTACCCGCCCACGAAGATAATGT
GGTCTCCCGACAAGTCGCAGAACAGCACAGACCTGCTGGCTACTACGGAT
TGTGCAGCGAACGGAGACTTCTTTCGTCCGAACGGGGGAGCTGGAGCACC
CCTACCCGCCCACGAAGATAATGTGGTCTCCCGACAAGTCGCAGAACAGC
ACAGACCTGCTGGCTACTACGGGGGACTACCTGCGATTGTGGAGCGTGGA
CGAGCAGGAACCGGGCGGCGTGAAGCTGCATTCTCTCCTCAACAATGGGA
CTACCTGCGATTGTGGAGCGTGGACGAGCAGGAACCGGGCGGCGTGAAGC
TGCATTCTCTCCTCAACAATAACACAAACGCGGAGTACTGTTCGCCGCTG
ACGTCGTTTGATTGGTGCGAGGCTGACCCGGCAACCGTGGGCACGTCGAG
CATCGATACGACCTGCACCATCTGGGATGTTGCGAACACAAACGCGGAGT
ACTGTTCGCCGCTGACGTCGTTTGATTGGTGCGAGGCTGACCCGGCAACC
GTGGGCACGTCGAGCATCGATACGACCTGCACCATCTGGGATGTTGCGAC
CGGGACGCCGAAAACACAGCTCATCGCCCACGACAAGGAGGTGTACGACA
TCGCCTTCGCAAGACCGGGACGCCGAAAACACAGCTCATCGCCCACGACA
AGGAGGTGTACGACATCGCCTTCGCAAGGACGAAGGACATATTCGCGTCC
GTGGGCGCCGACGGCAGCGTCCGCATGTTCGACCTCCGTTCACTCGAGCA
CTCCACCATCATCTACGAGACGCACGACTTGACGCCGCTCATGCGCCTCA
GCTGGAACAAACAAGACCCCAACTACCTGGCCGCTATCCTCACCGACTCC
CCCAAGACAGTCATCCTTGACATCAGGACGAAGGACATATTCGCGTCCGT
GGGCGCCGACGGCAGCGTCCGCATGTTCGACCTCCGTTCACTCGAGCACT
CCACCATCATCTACGAGACGCACGACTTGACGCCGCTCATGCGCCTCAGC
TGGAACAAACAAGACCCCAACTACCTGGCCGCTATCCTCACCGACTCCCC
CAAGACAGTCATCCTTGACATCAGAGTACCGTCGTTACCAGTTGCGATGC
TCGGAGGCCACCAATCAGCGATCAGCGCCATCGCGTGGGCGCCTCACTCA
TCTTGCCATATCTGCACAGCAGTACCGTCGTTACCAGTTGCGATGCTCGG
AGGCCACCAATCAGCGATCAGCGCCATCGCGTGGGCGCCTCACTCATCTT
GCCATATCTGCACAGCAGGGGACGACTGCCAGTCCCTCATCTGGGACCTG
TCGTGCGTGCCGTCTTCGGTCCCCAAGGCCGTGGAGGACCCCATCCTCGC
CTACACCGCCGAGGAGCAGGTGAACCAGCTGCAGTGGTCGGCGAGGCATC
CGGAGTGGATCGCGATCGCCTTCGCCAACAAGATGCAGATCTTGAGGGTC
TGAAGGGGACGACTGCCAGTCCCTCATCTGGGACCTGTCGTGCGTGCCGT
CTTCGGTCCCCAAGGCCGTGGAGGACCCCATCCTCGCCTACACCGCCGAG
GAGCAGGTGAACCAGCTGCAGTGGTCGGCGAGGCATCCGGAGTGGATCGC
GATCGCCTTCGCCAACAAGATGCAGATCTTGAGGGTCTGA
back to top