mRNA_L-elsbetiae_contig941.18400.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig941.18400.1 vs. uniprot
Match: A0A6H5LDU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDU4_9PHAE) HSP 1 Score: 231 bits (589), Expect = 8.310e-68 Identity = 114/121 (94.21%), Postives = 117/121 (96.69%), Query Frame = 2 Query: 443 APVETSQLDPRAPVRKGKWTAEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENIIETHRSRRELEEMARKFHIRLESMRPGAGRLGSA 805 AP+ETSQLDPRAPVRKGKWT EEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPEN+IETHRSRRELEEMARKFHIRLESMRPGA R S+ Sbjct: 121 APLETSQLDPRAPVRKGKWTPEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENLIETHRSRRELEEMARKFHIRLESMRPGASRTSSS 241
BLAST of mRNA_L-elsbetiae_contig941.18400.1 vs. uniprot
Match: D8LR84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR84_ECTSI) HSP 1 Score: 214 bits (546), Expect = 6.720e-63 Identity = 106/114 (92.98%), Postives = 109/114 (95.61%), Query Frame = 2 Query: 434 AVTAPVETSQLDPRAPVRKGKWTAEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENIIETHRSRRELEEMARKFHIRLESM 775 A T ++ SQLDPRAPVRKGKWT EEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPEN+IETHRSRRELEEMARKFHIRLESM Sbjct: 237 AKTVILDISQLDPRAPVRKGKWTPEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENLIETHRSRRELEEMARKFHIRLESM 350
BLAST of mRNA_L-elsbetiae_contig941.18400.1 vs. uniprot
Match: A0A7S1XJQ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJQ1_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.180e-36 Identity = 68/102 (66.67%), Postives = 82/102 (80.39%), Query Frame = 2 Query: 473 RAPVRKGKWTAEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENIIETHRSRRELEEMARKFHIRLESMR 778 R +RKGKWTAEEE YT ++I+DFN+GLL +A GTTLRSYLSEKLNCDPMRITKK+AG+SCIGKR+F P ERTPENI +S +EL ++ F +LES R Sbjct: 23 RCHLRKGKWTAEEEAYTERVIHDFNEGLLQVAAGTTLRSYLSEKLNCDPMRITKKYAGSSCIGKRIFAPCERTPENIERGRQSAKELADLEAAFRAKLESSR 124
BLAST of mRNA_L-elsbetiae_contig941.18400.1 vs. uniprot
Match: A0A835YQC6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQC6_9STRA) HSP 1 Score: 130 bits (328), Expect = 8.970e-33 Identity = 61/91 (67.03%), Postives = 72/91 (79.12%), Query Frame = 2 Query: 458 SQLDPRAPVRKGKWTAEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENIIETHRSRRE 730 S D VRKGKWT EEE YT++II DFN G LPL PGTTLR+YLS+KL+CDPMRITKKFAGA+CIGKRVF P E+TP+N+ S+R+ Sbjct: 136 SSSDKGMSVRKGKWTPEEEAYTSRIIRDFNNGYLPLPPGTTLRTYLSDKLSCDPMRITKKFAGAACIGKRVFAPCEKTPDNMAMVTASKRD 226
BLAST of mRNA_L-elsbetiae_contig941.18400.1 vs. uniprot
Match: A0A4D9DAS8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAS8_9STRA) HSP 1 Score: 130 bits (326), Expect = 8.220e-31 Identity = 60/95 (63.16%), Postives = 75/95 (78.95%), Query Frame = 2 Query: 470 PRAPVRKGKWTAEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENIIETHRSRRELEEMARKF 754 PR P+R+GKWT +EE Y ++II DFN GLLPLA GTTLR+YLS+ LNCDPMRITKKFAGA+CIGKRVF P + PE + R++ ELE + ++F Sbjct: 152 PRPPLRRGKWTFQEEAYVSRIIYDFNHGLLPLAAGTTLRAYLSDTLNCDPMRITKKFAGAACIGKRVFQPCDSHPETLERRRRAQAELEVLRKEF 246
BLAST of mRNA_L-elsbetiae_contig941.18400.1 vs. uniprot
Match: A0A7S3NKK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKK1_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.460e-30 Identity = 60/104 (57.69%), Postives = 77/104 (74.04%), Query Frame = 2 Query: 458 SQLDPRAPVRKGKWTAEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENIIETHRSRRELEEMARKFHIRLE 769 S L AP+RKGKWT EEE+YT+ II +F +G+L APGTTLRS+LS+KL+CDPMRITKKFAG + IGKRVF P + TP+ + E R + ELE + +F L+ Sbjct: 119 SSLKSSAPLRKGKWTMEEEMYTSAIIREFERGMLNCAPGTTLRSFLSDKLHCDPMRITKKFAGDASIGKRVFTPCKHTPDTVAEMARVQAELEAIETRFMSHLQ 222
BLAST of mRNA_L-elsbetiae_contig941.18400.1 vs. uniprot
Match: A0A8J2SN29_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN29_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.230e-29 Identity = 62/112 (55.36%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 434 AVTAPVETSQLDPRAPVRKGKWTAEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENIIETHRSRRELEEMARKFHIRLE 769 A TA + +AP+RKGKWT EEE++T +I +F +G+L GTTLRSYLSEKL+CDPMRITKKFAG + IGKRVF P ++TPE E R R EL +M R+F L+ Sbjct: 133 ATTAAARVAAQREKAPLRKGKWTQEEELFTAAVIREFERGMLACPAGTTLRSYLSEKLHCDPMRITKKFAGDASIGKRVFTPCKQTPELQEEARRVRAELRDMERRFAAHLQ 244
BLAST of mRNA_L-elsbetiae_contig941.18400.1 vs. uniprot
Match: W7THV5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THV5_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.390e-29 Identity = 59/103 (57.28%), Postives = 76/103 (73.79%), Query Frame = 2 Query: 464 LDPRAPVRKGKWTAEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENIIETHRSRRELEEMARKFHIRLES 772 L PR P+RKGKWT EEE+Y II++FNKGL+ L GTTLRSYLSE+LNCDPMR+TKKF+G SCIGK +F P E TP+N+ + R L E+ F ++++ Sbjct: 79 LVPRVPLRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAFKSKVDA 181
BLAST of mRNA_L-elsbetiae_contig941.18400.1 vs. uniprot
Match: A0A4D9DIA2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DIA2_9STRA) HSP 1 Score: 126 bits (317), Expect = 4.800e-29 Identity = 59/103 (57.28%), Postives = 76/103 (73.79%), Query Frame = 2 Query: 464 LDPRAPVRKGKWTAEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENIIETHRSRRELEEMARKFHIRLES 772 L PR P+RKGKWT EEE+Y II++FNKGL+ L GTTLRSYLSE+LNCDPMR+TKKF+G SCIGK +F P E TP+N+ + R L E+ F ++++ Sbjct: 79 LVPRLPLRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAFKSKVDA 181
BLAST of mRNA_L-elsbetiae_contig941.18400.1 vs. uniprot
Match: A0A836CGH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGH4_9STRA) HSP 1 Score: 126 bits (316), Expect = 8.400e-29 Identity = 62/112 (55.36%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 482 VRKGKWTAEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGAS-------------CIGKRVFMPVERTPENIIETHRSRRELEEMARKFHIRLESMR 778 VRKGKWT EEE +T++II DFN G LPL PGTTLR+YLS+KLNCDPMRI K FAGA+ CIGKRVF P ERTPEN+ S+R+L ++ +F R+ ++ Sbjct: 42 VRKGKWTPEEEAFTSRIIRDFNNGYLPLPPGTTLRTYLSDKLNCDPMRIAKNFAGAAXXXXXXXXXXXXACIGKRVFAPCERTPENLAMVLASKRDLADLEERFQQRMNGIK 153 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig941.18400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig941.18400.1 >prot_L-elsbetiae_contig941.18400.1 ID=prot_L-elsbetiae_contig941.18400.1|Name=mRNA_L-elsbetiae_contig941.18400.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp MEATQIEEAHQHQEGGVSSGSLLLGSTPWGTERSGGKAERRDRESPRAMKback to top mRNA from alignment at L-elsbetiae_contig941:4346..6040+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig941.18400.1 ID=mRNA_L-elsbetiae_contig941.18400.1|Name=mRNA_L-elsbetiae_contig941.18400.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1695bp|location=Sequence derived from alignment at L-elsbetiae_contig941:4346..6040+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig941:4346..6040+ >mRNA_L-elsbetiae_contig941.18400.1 ID=mRNA_L-elsbetiae_contig941.18400.1|Name=mRNA_L-elsbetiae_contig941.18400.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1494bp|location=Sequence derived from alignment at L-elsbetiae_contig941:4346..6040+ (Laminarionema elsbetiae ELsaHSoW15)back to top |