mRNA_L-elsbetiae_contig9396.18390.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9396.18390.1
Unique NamemRNA_L-elsbetiae_contig9396.18390.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9396.18390.1 vs. uniprot
Match: A0A6H5K3X3_9PHAE (Lactamase_B domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3X3_9PHAE)

HSP 1 Score: 353 bits (905), Expect = 1.020e-106
Identity = 176/220 (80.00%), Postives = 197/220 (89.55%), Query Frame = 3 
Query:  324 RLMAEKLLPILEEHKEAIVKTTGRKDVGWVLGWIKSQRGGESITLPGTDVTINSADYVGEPVKGCKVVVLGDTCDAGSMVPLALGADVVVHEATNTFLSPQDQGKTYAEVEAETIKHGHSTPVMAAAFAKKVGAKMLILNHFSARYRGDPSDASVAAMLRIERQAARAGGFERHQVVASWDLLERPVFDADRFEAEQAAAREADAAFEAELLRRAQKWDE 983
            RL  E+L PILEEHKEAI  TTGR+DVGW+LGWIKS + GE+ITLPGTDVT++SADYVG  VKG KVV+LGDTCDA S+VPLA+GADVVVHEATNT L P DQGKTYA+VEAE IKHGHSTP+MAAAFA++VGAK LILNHFSARYRGDPSDASVAAMLRIERQAARAGG ERHQVVASWDLLE PV DAD++EA +A AREADAAF+ ELLRRA++W +
Sbjct:  906 RLKVEELNPILEEHKEAICNTTGRRDVGWMLGWIKSTKRGETITLPGTDVTLDSADYVGASVKGRKVVILGDTCDAASIVPLAMGADVVVHEATNTMLPPLDQGKTYADVEAEAIKHGHSTPMMAAAFAQRVGAKTLILNHFSARYRGDPSDASVAAMLRIERQAARAGGLERHQVVASWDLLEMPVVDADQWEANRATAREADAAFDGELLRRARQWQQ 1125
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BLAST of mRNA_L-elsbetiae_contig9396.18390.1 vs. uniprot
Match: A0A6H5J7F6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F6_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 4.170e-56
Identity = 100/119 (84.03%), Postives = 107/119 (89.92%), Query Frame = 3 
Query:  519 KVVVLGDTCDAGSMVPLALGADVVVHEATNTFLSPQDQGKTYAEVEAETIKHGHSTPVMAAAFAKKVGAKMLILNHFSARYRGDPSDASVAAMLRIERQAARAGGFERHQVVASWDLLE 875
            KVV+LGDTCDA S+VPLA+GADVVVHEATNT L P DQGKTYA+VEAE IKHGHSTP+MAAAFA++VGAK LILNHFSARYRGDPSDASVAAMLRIERQAARAGG ERHQ    WD LE
Sbjct:  231 KVVILGDTCDAASIVPLAMGADVVVHEATNTMLPPLDQGKTYADVEAEAIKHGHSTPMMAAAFAQRVGAKTLILNHFSARYRGDPSDASVAAMLRIERQAARAGGLERHQ---GWDFLE 346
[Close]
BLAST of mRNA_L-elsbetiae_contig9396.18390.1 vs. uniprot
Match: A0A836CJH3_9STRA (Beta-lactamase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH3_9STRA)

HSP 1 Score: 175 bits (444), Expect = 4.940e-45
Identity = 109/218 (50.00%), Postives = 145/218 (66.51%), Query Frame = 3 
Query:  351 ILEEHKEAIVKTTGRKDVGWVLGWIKSQ--RGGESITLPGTDVTINSADYVGEPV-KGCKVVVLGDTCDAGSMVPLALGADVVVHEATNTFLSPQDQGKTYAEVEAETIKHGHSTPVMAAAFAKKVGAKMLILNHFSARYRGDPSDASVAAMLRIERQAARAGGFERHQVVASWDLLERPVFDADRFEAEQAAAREADAAFEAELLRRAQKWDEEVAE 995
            +L  ++EAI +  G ++    +  IK    +GG S+T+PG D T+   D + EP  KG KVVVLGDTCDA S+   A GA++VVHEATNT+LSP D G  YA +EA+TI HGHSTP MAA FA++VGA+ L+L HFS RY GD   +S+A M RI RQA RAGGF+RHQV  + DLL+ P+   + ++A  AA    DAA +A L   +++W+   AE
Sbjct:  307 VLNRNQEAIRQAFGYRNHRRYMSDIKDGYVKGG-SLTVPG-DGTVLLYDEIMEPKRKGRKVVVLGDTCDASSLEAAAQGAELVVHEATNTYLSPWDTGD-YATIEAQTIAHGHSTPHMAARFAQRVGARALVLTHFSPRYHGDDRPSSIALMERIARQAVRAGGFKRHQVHTAHDLLQLPIPYDEGWDAYVAA----DAAADAALAAASREWEARQAE 517
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BLAST of mRNA_L-elsbetiae_contig9396.18390.1 vs. uniprot
Match: A0A7S1BFP1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BFP1_9STRA)

HSP 1 Score: 155 bits (393), Expect = 4.370e-38
Identity = 84/187 (44.92%), Postives = 116/187 (62.03%), Query Frame = 3 
Query:  324 RLMAEKLLPILEEHKEAIVKTTGRKDVGWVLGWIKSQRGGESITLPGTDVTINSADYVGEPVKGCKVVVLGDTCDAGSMVPLALGADVVVHEATNTFLSPQDQGKTYAEVEAETIKHGHSTPVMAAAFAKKVGAKMLILNHFSARYRGDPSDASVAAMLRIERQAARAGGFERHQVVASWDLLERPV 884
            RL A+ + PIL+ + +A++   G KD   ++  IK  + G++ T+P   V + S + V  P KG  V + GDT DA +M  +A GADV+VHEATNT     DQG TY + E + ++HGHSTP+MA  FA ++ AK L++NHFS RY GDPS  S+  M RIE+QA  A G     VVA WD +  P+
Sbjct:  352 RLKADLVAPILKRNFQALIDG-GVKDPMKLMAHIKKMKEGDTFTMPDGTVIVQS-EVVEPPQKGRIVAICGDTSDASAMAGIAHGADVLVHEATNTHFDNMDQG-TYKQAENDAVRHGHSTPLMAGEFAGRIRAKRLLMNHFSPRYPGDPSIESIRTMTRIEKQAMDASGLPETAVVAVWDFMSIPI 535
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BLAST of mRNA_L-elsbetiae_contig9396.18390.1 vs. uniprot
Match: A0A7S2EX78_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EX78_TRICV)

HSP 1 Score: 149 bits (376), Expect = 6.340e-38
Identity = 83/187 (44.39%), Postives = 116/187 (62.03%), Query Frame = 3 
Query:  324 RLMAEKLLPILEEHKEAIVKTTGRKDVGWVLGWIKSQRGGESITLPGTDVTINSADYVGEPVKGCKVVVLGDTCDAGSMVPLALGADVVVHEATNTFLSPQDQGKTYAEVEAETIKHGHSTPVMAAAFAKKVGAKMLILNHFSARYRGDPSDASVAAMLRIERQAARAGGFERHQVVASWDLLERPV 884
            RL  E + P++  + +A+ K  G +    V+  IK    GES T P   V I+  D V  P  G KVV+ GDT D+ +M  LA  ADVV+HEATNT+L+  D+      V  + I HGHSTP MA  FA++VGAK L+LNHFS+RY+GD +  S++ M+RIE+QA +A G    +V A+WD++  P+
Sbjct:  105 RLRPELVEPVVRRNFKAL-KEAGMRAPMKVMQMIKDLPDGESFTFPDGTV-IHQEDVVEPPRDGRKVVICGDTADSRAMDNLAANADVVIHEATNTYLAGVDKDTNMKFVTKDAIMHGHSTPQMAGNFARRVGAKRLVLNHFSSRYKGDQTLDSMSIMMRIEKQAIKASGLPPERVAAAWDMMVLPL 289
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BLAST of mRNA_L-elsbetiae_contig9396.18390.1 vs. uniprot
Match: A0A7S2V6X7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6X7_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.660e-36
Identity = 79/179 (44.13%), Postives = 105/179 (58.66%), Query Frame = 3 
Query:  348 PILEEHKEAIVKTTGRKDVGWVLGWIKSQRGGESITLPGTDVTINSADYVGEPVKGCKVVVLGDTCDAGSMVPLALGADVVVHEATNTFLSPQDQGKTYAEVEAETIKHGHSTPVMAAAFAKKVGAKMLILNHFSARYRGDPSDASVAAMLRIERQAARAGGFERHQVVASWDLLERPV 884
            P++  + + +++  G K    V  ++K+   G   T P     +   D +G  +KG KVV+LGDTCDA  M PL   ADV+VHEATN  L P D G  Y   E +T+ HGHSTP +A   AK   AK L+L HFS RY+GD SD SV+ M  IE QA +A G   + V+A+WDL+  PV
Sbjct:   16 PLINANFDGLIEA-GFKQPPKVFQYVKNLPKGGVFTFP-DGTKLRQEDAMGPDIKGRKVVILGDTCDAYGMGPLMEDADVLVHEATNAHLPPFDSGP-YWMTERDTVSHGHSTPQIAGKTAKDFRAKRLVLTHFSPRYQGDDSDVSVSIMYSIEDQARKASGLSGNNVIAAWDLMNLPV 191
[Close]
BLAST of mRNA_L-elsbetiae_contig9396.18390.1 vs. uniprot
Match: A0A7S0G9X6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G9X6_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.730e-36
Identity = 86/188 (45.74%), Postives = 115/188 (61.17%), Query Frame = 3 
Query:  324 RLMAEKLLPILEEHKEAIVKTTGRKDVGWVLGWIKSQRGGESITLP-GTDVTINSADYVGEPVKGCKVVVLGDTCDAGSMVPLALGADVVVHEATNTFLSPQDQGKTYAEVEAETIKHGHSTPVMAAAFAKKVGAKMLILNHFSARYRGDPSDASVAAMLRIERQAARAGGFERHQVVASWDLLERPV 884
            RL  E + PI++ +  A+ + +G      V+  IK+   G   T P GT+V  N  D + EP KG K+VV GDT D  ++  LA  ADV++HEATN F+   D G +  +VE ET  HGHSTP MAA FAK++GAK L+LNHFSARY GD S  S+  M  IE+QA  + G + + V A+WD +  PV
Sbjct:  321 RLRPELVEPIIKRNAAAL-RESGMAHPMKVMAKIKNLPDGGIYTFPDGTEV--NQKDVLEEPRKGRKIVVCGDTADCRAIEDLAKNADVLIHEATNAFIPGFDSGTSPIKVEEETKLHGHSTPHMAAKFAKRIGAKRLLLNHFSARYSGDQSFDSIVKMTTIEKQAIESSGLDENNVAATWDFMVLPV 505
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BLAST of mRNA_L-elsbetiae_contig9396.18390.1 vs. uniprot
Match: A0A1Z5JCR1_FISSO (Ribonuclease Z n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCR1_FISSO)

HSP 1 Score: 146 bits (369), Expect = 2.610e-36
Identity = 85/188 (45.21%), Postives = 116/188 (61.70%), Query Frame = 3 
Query:  324 RLMAEKLLPILEEHKEAIVKTTGRKDVGWVLGWIKSQRGGESITLP-GTDVTINSADYVGEPVKGCKVVVLGDTCDAGSMVPLALGADVVVHEATNTFLSPQDQGKTYAEVEAETIKHGHSTPVMAAAFAKKVGAKMLILNHFSARYRGDPSDASVAAMLRIERQAARAGGFERHQVVASWDLLERPV 884
            RL  E + PI++ +  A+ K   R  +   +  IK+   G + T P GT VT    D V  P +G KVV+ GDT D+ ++  LAL ADV++HEATN +L   D+  ++ EV  + I HGHSTP +A AF+K V  K LILNHFSARY+GD S  S++ M+RIE QA +A G    QV A+WDL+  P+
Sbjct:  165 RLKNEYVEPIVKRNIAALKKAGFRAPMK-AMAVIKNLPPGGAFTFPDGTVVT--HEDAVEAPRQGRKVVICGDTADSRALRGLALNADVIIHEATNAYLQGVDKDTSFREVTRDAIAHGHSTPQIAGAFSKAVNGKRLILNHFSARYKGDVSVDSLSIMMRIEMQAMKASGLNETQVAAAWDLMVLPI 349
[Close]
BLAST of mRNA_L-elsbetiae_contig9396.18390.1 vs. uniprot
Match: B8CGC5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CGC5_THAPS)

HSP 1 Score: 149 bits (375), Expect = 2.750e-35
Identity = 82/187 (43.85%), Postives = 109/187 (58.29%), Query Frame = 3 
Query:  324 RLMAEKLLPILEEHKEAIVKTTGRKDVGWVLGWIKSQRGGESITLPGTDVTINSADYVGEPVKGCKVVVLGDTCDAGSMVPLALGADVVVHEATNTFLSPQDQGKTYAEVEAETIKHGHSTPVMAAAFAKKVGAKMLILNHFSARYRGDPSDASVAAMLRIERQAARAGGFERHQVVASWDLLERPV 884
            RL  E +LP++E +   +++   R  +  V+  +K+   G S T P   V +   D V  P KG KVV+ GDT D   +  LA GADV+VHEATNTFL   D+      V  +   HGHSTP MA  FAK++GAK L+LNHFSARY+GD S  S+  M R+ERQA +A G     V  +WD +  P+
Sbjct:  469 RLQPENVLPVIERNHAGLIEAGVRHPMK-VMAMVKNLPVGGSYTFPDGTV-VKQEDVVEPPRKGRKVVICGDTADCRGLEGLAQGADVLVHEATNTFLPGVDKDGDLRGVTRDAKIHGHSTPFMAGEFAKRIGAKKLVLNHFSARYKGDQSIESMTIMTRMERQAMKASGLPETSVACAWDYMILPI 653
[Close]
BLAST of mRNA_L-elsbetiae_contig9396.18390.1 vs. uniprot
Match: A0A1Z5K3N8_FISSO (Ribonuclease Z n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3N8_FISSO)

HSP 1 Score: 147 bits (370), Expect = 3.860e-35
Identity = 86/188 (45.74%), Postives = 115/188 (61.17%), Query Frame = 3 
Query:  324 RLMAEKLLPILEEHKEAIVKTTGRKDVGWVLGWIKSQRGGESITLP-GTDVTINSADYVGEPVKGCKVVVLGDTCDAGSMVPLALGADVVVHEATNTFLSPQDQGKTYAEVEAETIKHGHSTPVMAAAFAKKVGAKMLILNHFSARYRGDPSDASVAAMLRIERQAARAGGFERHQVVASWDLLERPV 884
            RL  E + PI++ +  A+ K  G K     +  IK+   G + T P GT VT    D V  P +G KVV+ GDT D+ ++  LAL ADV++HEATN +L   D+  ++ EV  + I HGHSTP +A AF K V  K LILNHFSARY+GD S  S++ M+RIE QA +A G    QV A+WDL+  P+
Sbjct:  342 RLKNEYVEPIVKRNIAAL-KQAGFKAPMKAMAVIKNLPPGGAFTFPDGTVVT--HEDAVEAPRQGRKVVICGDTADSRALRGLALNADVIIHEATNAYLQGVDKDTSFREVTRDAITHGHSTPQIAGAFCKAVNGKRLILNHFSARYKGDVSVDSLSIMMRIEMQAMKASGLNETQVAAAWDLMVLPI 526
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9396.18390.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3X3_9PHAE1.020e-10680.00Lactamase_B domain-containing protein n=2 Tax=Ecto... [more]
A0A6H5J7F6_9PHAE4.170e-5684.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJH3_9STRA4.940e-4550.00Beta-lactamase-like protein n=1 Tax=Tribonema minu... [more]
A0A7S1BFP1_9STRA4.370e-3844.92Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2EX78_TRICV6.340e-3844.39Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2V6X7_9STRA1.660e-3644.13Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0G9X6_9STRA1.730e-3645.74Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A1Z5JCR1_FISSO2.610e-3645.21Ribonuclease Z n=1 Tax=Fistulifera solaris TaxID=1... [more]
B8CGC5_THAPS2.750e-3543.85Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1Z5K3N8_FISSO3.860e-3545.74Ribonuclease Z n=1 Tax=Fistulifera solaris TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9396contigL-elsbetiae_contig9396:3954..7504 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.8
Seed ortholog evalue1.6e-94
Seed eggNOG ortholog2880.D7FX51
KEGG koko:K00784
KEGG Pathwayko03013,map03013
Hectar predicted targeting categoryother localisation
EggNOG free text desc.3'-tRNA processing endoribonuclease activity
EggNOG OGsCOG1234@1,KOG2121@2759
EC3.1.26.11
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03016
Exons5
Model size1382
Cds size954
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817008.4153783-UTR-L-elsbetiae_contig9396:3953..41631622817008.4153783-UTR-L-elsbetiae_contig9396:3953..4163Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9396 3954..4163 -
1691683979.1113799-UTR-L-elsbetiae_contig9396:3953..41631691683979.1113799-UTR-L-elsbetiae_contig9396:3953..4163Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9396 3954..4163 -
1622817008.4836705-UTR-L-elsbetiae_contig9396:7286..75041622817008.4836705-UTR-L-elsbetiae_contig9396:7286..7504Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9396 7287..7504 -
1691683979.1872427-UTR-L-elsbetiae_contig9396:7286..75041691683979.1872427-UTR-L-elsbetiae_contig9396:7286..7504Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9396 7287..7504 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817008.4257803-CDS-L-elsbetiae_contig9396:4163..44871622817008.4257803-CDS-L-elsbetiae_contig9396:4163..4487Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9396 4164..4487 -
1691683979.1281073-CDS-L-elsbetiae_contig9396:4163..44871691683979.1281073-CDS-L-elsbetiae_contig9396:4163..4487Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9396 4164..4487 -
1622817008.4360094-CDS-L-elsbetiae_contig9396:5265..54811622817008.4360094-CDS-L-elsbetiae_contig9396:5265..5481Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9396 5266..5481 -
1691683979.137394-CDS-L-elsbetiae_contig9396:5265..54811691683979.137394-CDS-L-elsbetiae_contig9396:5265..5481Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9396 5266..5481 -
1622817008.4467623-CDS-L-elsbetiae_contig9396:6021..61321622817008.4467623-CDS-L-elsbetiae_contig9396:6021..6132Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9396 6022..6132 -
1691683979.1469767-CDS-L-elsbetiae_contig9396:6021..61321691683979.1469767-CDS-L-elsbetiae_contig9396:6021..6132Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9396 6022..6132 -
1622817008.4609275-CDS-L-elsbetiae_contig9396:6643..67361622817008.4609275-CDS-L-elsbetiae_contig9396:6643..6736Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9396 6644..6736 -
1691683979.160637-CDS-L-elsbetiae_contig9396:6643..67361691683979.160637-CDS-L-elsbetiae_contig9396:6643..6736Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9396 6644..6736 -
1622817008.4723163-CDS-L-elsbetiae_contig9396:7076..72861622817008.4723163-CDS-L-elsbetiae_contig9396:7076..7286Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9396 7077..7286 -
1691683979.1783028-CDS-L-elsbetiae_contig9396:7076..72861691683979.1783028-CDS-L-elsbetiae_contig9396:7076..7286Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9396 7077..7286 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9396.18390.1prot_L-elsbetiae_contig9396.18390.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9396 4164..7286 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9396.18390.1

>prot_L-elsbetiae_contig9396.18390.1 ID=prot_L-elsbetiae_contig9396.18390.1|Name=mRNA_L-elsbetiae_contig9396.18390.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=318bp
MPQLNQNHAIETVSNTFTLPFRACAVFSTTKTLMLRLMAEKLLPILEEHK
EAIVKTTGRKDVGWVLGWIKSQRGGESITLPGTDVTINSADYVGEPVKGC
KVVVLGDTCDAGSMVPLALGADVVVHEATNTFLSPQDQGKTYAEVEAETI
KHGHSTPVMAAAFAKKVGAKMLILNHFSARYRGDPSDASVAAMLRIERQA
ARAGGFERHQVVASWDLLERPVFDADRFEAEQAAAREADAAFEAELLRRA
QKWDEEVAEAADKAVAAAAAAAALDYTPPLAERLAIERQLEGAAEANGSA
AAAANTGLVGIMLDATV*
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mRNA from alignment at L-elsbetiae_contig9396:3954..7504-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9396.18390.1 ID=mRNA_L-elsbetiae_contig9396.18390.1|Name=mRNA_L-elsbetiae_contig9396.18390.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3551bp|location=Sequence derived from alignment at L-elsbetiae_contig9396:3954..7504- (Laminarionema elsbetiae ELsaHSoW15)
GCAGTATGCCATTGGTATGTATGTAGTAACTATATGTTACATACAATATT
CTTTTTTTCTTCTTTTCCCTCCCATTATTGGCGCGTTTGTCGTCTGCCCC
ACTGGCCCCCTTCCTCCACTACGAGTAGCTAGACGACCCAGCCGGGGGTC
ACACAGGAGGGGGGGGTTGGACCCCCTCCTGCGGTGCCTGCCAATACTGC
TTGCTGCGCGCGCCGCCGATGCCGCAGCTCAACCAAAACCACGCGATCGA
AACCGTGAGCAACACTTTTACGCTGCCTTTTCGCGCTTGCGCCGTCTTCT
CTACAACGAAAACACTGATGCTTAGGCTGATGGCTGAAAAGCTGCTCCCC
ATCCTCGAAGAGCACAAGGAGGCGATCGTCAAGACCACGGGCAGAAAAGA
TGTTGGCTGGGTTCTCGGCTGGATTAAGGTAGGTACCGACCGTCCGGAGT
TATGTGAGACACACCGCAGGCTATGGGTTGGCGCAGTTTTGTCTCTTCTG
CCCCGCAATGCTGCGCGCTGTTCTGGTGTTTTTCTTTCGTTTCGGGTCTT
CTGCTCCGACTGGAGAAAGGGGTTGGTGATCAAGAGGTGCGTATCTGCTG
TTGTGTTCACTCGAAATGTAGGTCGAAAACAACTTGGCCGTGGTTTAGGC
CACACCGCGAAACAGTGGTGTATTGTGTGTAGAATCCACAGGCCGCGGCC
GTTTTTTCACTCCTGCGCCACCGTTTGCCCCCCCCTCCCTCGCCCAACAA
ACGCACCCCGTGCACTAGTCGCAGCGCGGTGGTGAGAGCATCACGCTGCC
AGGAACCGACGTGACGATCAACAGCGCGGACTACGTGGGCGAGCCCGTTA
AGGGCTGTAAGGTGTGTTAGGGTGCACCCACGCCACATCCTTCGCATTAC
ACCGCGCCATCTGCGTGTTTTTGGTCAGTTTGTCGGGGGGAGGGGGGGGG
GGGCTTTTGAGGGGTTTGGCGTTTTTTTGCTGCGGTGGTTCGTCCTCGGC
TTGTTTTTTCGATTGGGACTAAATGCCGGGCTAGATCGTGTATGCGTTCG
TACCCGCGGTTGTTTGCGTCGCCCCTCTTAAGTCGGCATGACCCACGCGT
TCCGTGTTCCCGCATGAATGTTTCCGTCGAGCGTCGATGTCATGTCAAAA
CGTGTGTGTGTGTGTCTGTGTGTGCGTGTCATCGTTCCTTGGTGCATGAA
ATGGAAAATAGTTGTGCATAGTTTTTCCAAGGCACTTTTTTTGCCATGTT
TCATTGCCTCTTGGCTTGGTTGTTTGGGTGTCATGTGCCATGCACATAAT
TGTCATGGCATCGTATTTTCTCCTTTGACCTTGCTGTTCCCCTTCGCCTA
CGTTGCGTTTGGCGTTACTCAGGTGGTGGTTCTTGGAGATACCTGCGACG
CCGGGAGCATGGTGCCCCTCGCTTTGGGGGCGGACGTGGTGGTTCACGAG
GCCACCAACACCTTCCTGTCGCCGCAGGACCAGGTGCGAATAGTGTTCCA
CTTTTTACGAGCGGCGTTTTCGTGCTTCGCTTGAACCTCACGGCATATAC
ACTCGCAGTAGAAGTATATTTGAAGGAAAGTATATAGGCTTGCCGTTTGT
TCCGCACACGCTACAAATATGATTTTGTGAGCGAGGCATATATTAGTGCC
GCGACACAAGGCAAGTAAGTCACTGCTCTCGAGACAGCCGTAGGGTGGGG
GGGGGGCAAGGCAAGAACCTGTGTGAATGAAGCCACCACCCGCCCCACCG
GCGAAGCCCCCCCTTGCGGCGAGTGGGTTTCACGGCGCACTTTTCATGCC
GGTCTCGAAAGGAGCTAAAAGGTAAATATTAGTTGTATCTCGTGCCTGCA
CCGCCCCGGCGATTGAAAAAAAAAAAGAAAAAAAAAAGGGGAATGCCTGT
TCCCACTCACCCTCCCCTCCCCCCCCCTCCCTCCTTCCCCGCATGTCGGC
ACCACGCCTGCGCACTCCGACACCCCCCTTGCCCCCTTCCCCCCCACCCA
CGGTGTGGCGGAAATTTTCAAAGGGCAAGACGTACGCCGAGGTCGAGGCC
GAGACCATCAAGCACGGCCACAGCACCCCCGTTATGGCCGCCGCCTTCGC
CAAGAAGGTCGGAGCCAAGATGCTGATCCTCAACCACTTCTCGGCGCGGT
ACAGGGGGGACCCGTCCGACGCGAGCGTGGCGGCCATGCTGAGGATCGAG
CGCCAGGCCGCGAGGGCTGGGGGCTTCGAACGGCACCAGGTAGGGATGGG
GGCCACGTGTGTGTATATATACGTAATGGCGTATTTTATTCCGTTTTTTG
GTGCGGAGCCGCATTTGGCTCTTGCCGTGTGTAGTTGTTTTGATTTGTAG
GCACCGCTGTATTGTACTGCGTCGCATGTAATGTATGCAGTTAGCCCTTG
TACTCCTTACTGCGGGCGGCACGAGTGCCCTTTTCGCCCATCCCGAGCAT
GCCGTCTGGTGTTGACTCGTACTCTCCATAGGATTTGCTTTTCGTGCGTG
GGGAGTGTTTCTCAAACGACGCCTTGGCTGAGAGAGCTTTGGAGTATTGC
GGCGCTTCGGGGTGGATTTTTTTTTCTTTTTTTTTCCGCCCATCATTGGC
ACATTTGTCGTCTGCCCCACTGGCCCTCTTCCTCCACTTCGACTAGCTTG
ACCCAACCGGGGCCACACAGGAGGGGGGGTTGGACCCCCTCCTGCGGTGC
GCCTGTACTTGTCCGATGGGACGAAAACACACAGCTTGGGAATGAAATGA
GTGTCGACAAAGTGTGCTGGCTGCGTGCCCTGTCTTCTTCCCGAAAGGGG
CCCGGTGACGCGCGGGGAGGCCGCGTTACAACTGCGCGGGGCGCCCTTTC
TCTCCTGTTGCCAGCGGGTGTGGGGGCTTCCCCTCCCCTCCCCTGCCGAC
CCTCTCCCCTCCCTGCATGGCTCCAACCCCGCGTCAACCCACCCCTCTTC
CATTCCATGTCCTCCTTACTTCCTCGTGATTTGTGTGCGCATCGCGCGCG
CACACCACCACGCACAGGTTGTGGCCTCGTGGGACCTCCTGGAGCGTCCT
GTGTTTGACGCAGATCGCTTCGAGGCGGAGCAAGCCGCGGCCAGAGAGGC
CGACGCCGCCTTCGAAGCCGAGCTGCTGAGGCGGGCGCAGAAATGGGACG
AGGAAGTGGCAGAAGCTGCGGACAAGGCGGTGGCAGCGGCGGCAGCAGCA
GCAGCACTGGACTACACGCCACCCCTCGCAGAAAGATTAGCTATTGAGCG
GCAGCTGGAGGGGGCAGCCGAAGCAAACGGCTCTGCCGCCGCCGCTGCGA
ACACGGGGCTTGTTGGGATAATGCTTGATGCGACGGTGTGATTGCGGGCC
CCGCCGCGATCTTGGTCCCTCTCTCGTAGTCGGCCAATTGCCGTGTCGAG
GAAGCTTGATGCATCATTATTTATGACACCGCAATCGTCGCGTGGTATTG
TACCTATTGTGCTCCGTGTAGTCGGCCAATTGCCGTGTCGAGGAAGCTTG
ATGCATCATTATTTATGACACCGCAATCGTCGCGTGGTATTGTACCTATT
G
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9396:3954..7504-

>mRNA_L-elsbetiae_contig9396.18390.1 ID=mRNA_L-elsbetiae_contig9396.18390.1|Name=mRNA_L-elsbetiae_contig9396.18390.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1908bp|location=Sequence derived from alignment at L-elsbetiae_contig9396:3954..7504- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGCAGCTCAACCAAAACCACGCGATCGAAACCGTGAGCAACACTTT
TACGCTGCCTTTTCGCGCTTGCGCCGTCTTCTCTACAACGAAAACACTGA
TGCTTAGGCTGATGGCTGAAAAGCTGCTCCCCATCCTCGAAGAGCACAAG
GAGGCGATCGTCAAGACCACGGGCAGAAAAGATGTTGGCTGGGTTCTCGG
CTGGATTAAGATGCCGCAGCTCAACCAAAACCACGCGATCGAAACCGTGA
GCAACACTTTTACGCTGCCTTTTCGCGCTTGCGCCGTCTTCTCTACAACG
AAAACACTGATGCTTAGGCTGATGGCTGAAAAGCTGCTCCCCATCCTCGA
AGAGCACAAGGAGGCGATCGTCAAGACCACGGGCAGAAAAGATGTTGGCT
GGGTTCTCGGCTGGATTAAGTCGCAGCGCGGTGGTGAGAGCATCACGCTG
CCAGGAACCGACGTGACGATCAACAGCGCGGACTACGTGGGCGAGCCCGT
TAAGGGCTGTAAGTCGCAGCGCGGTGGTGAGAGCATCACGCTGCCAGGAA
CCGACGTGACGATCAACAGCGCGGACTACGTGGGCGAGCCCGTTAAGGGC
TGTAAGGTGGTGGTTCTTGGAGATACCTGCGACGCCGGGAGCATGGTGCC
CCTCGCTTTGGGGGCGGACGTGGTGGTTCACGAGGCCACCAACACCTTCC
TGTCGCCGCAGGACCAGGTGGTGGTTCTTGGAGATACCTGCGACGCCGGG
AGCATGGTGCCCCTCGCTTTGGGGGCGGACGTGGTGGTTCACGAGGCCAC
CAACACCTTCCTGTCGCCGCAGGACCAGGGCAAGACGTACGCCGAGGTCG
AGGCCGAGACCATCAAGCACGGCCACAGCACCCCCGTTATGGCCGCCGCC
TTCGCCAAGAAGGTCGGAGCCAAGATGCTGATCCTCAACCACTTCTCGGC
GCGGTACAGGGGGGACCCGTCCGACGCGAGCGTGGCGGCCATGCTGAGGA
TCGAGCGCCAGGCCGCGAGGGCTGGGGGCTTCGAACGGCACCAGGGCAAG
ACGTACGCCGAGGTCGAGGCCGAGACCATCAAGCACGGCCACAGCACCCC
CGTTATGGCCGCCGCCTTCGCCAAGAAGGTCGGAGCCAAGATGCTGATCC
TCAACCACTTCTCGGCGCGGTACAGGGGGGACCCGTCCGACGCGAGCGTG
GCGGCCATGCTGAGGATCGAGCGCCAGGCCGCGAGGGCTGGGGGCTTCGA
ACGGCACCAGGTTGTGGCCTCGTGGGACCTCCTGGAGCGTCCTGTGTTTG
ACGCAGATCGCTTCGAGGCGGAGCAAGCCGCGGCCAGAGAGGCCGACGCC
GCCTTCGAAGCCGAGCTGCTGAGGCGGGCGCAGAAATGGGACGAGGAAGT
GGCAGAAGCTGCGGACAAGGCGGTGGCAGCGGCGGCAGCAGCAGCAGCAC
TGGACTACACGCCACCCCTCGCAGAAAGATTAGCTATTGAGCGGCAGCTG
GAGGGGGCAGCCGAAGCAAACGGCTCTGCCGCCGCCGCTGCGAACACGGG
GCTTGTTGGGATAATGCTTGATGCGACGGTGTGAGTTGTGGCCTCGTGGG
ACCTCCTGGAGCGTCCTGTGTTTGACGCAGATCGCTTCGAGGCGGAGCAA
GCCGCGGCCAGAGAGGCCGACGCCGCCTTCGAAGCCGAGCTGCTGAGGCG
GGCGCAGAAATGGGACGAGGAAGTGGCAGAAGCTGCGGACAAGGCGGTGG
CAGCGGCGGCAGCAGCAGCAGCACTGGACTACACGCCACCCCTCGCAGAA
AGATTAGCTATTGAGCGGCAGCTGGAGGGGGCAGCCGAAGCAAACGGCTC
TGCCGCCGCCGCTGCGAACACGGGGCTTGTTGGGATAATGCTTGATGCGA
CGGTGTGA
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