mRNA_L-elsbetiae_contig9394.18388.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9394.18388.1 vs. uniprot
Match: D8LF76_ECTSI (Carbohydrate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF76_ECTSI) HSP 1 Score: 155 bits (393), Expect = 2.910e-42 Identity = 88/129 (68.22%), Postives = 96/129 (74.42%), Query Frame = 1 Query: 1 ILPFFSGERSPGYNDDATACVLGLRRSTTRAQLVRAGLESVCLRLAAVVDLM---TGGGG-----------------------DGADVVTSGNAFAASPFLRQVLADSLGRTVRASGVTEETSLGVAVL 309 +LPFFSGERSPGYNDDATAC+ GLRRSTTR QLVRAGLESVCLRLAA+VDLM T GG + A+VVTSGNAFAASPF R++LADSLGRTVRASG TEETSLGVAV+ Sbjct: 474 VLPFFSGERSPGYNDDATACIFGLRRSTTRPQLVRAGLESVCLRLAAIVDLMKDLTDGGSMKGSSSSEHEPEASSAGALVRDHEDAEVVTSGNAFAASPFWRKMLADSLGRTVRASGATEETSLGVAVI 602
BLAST of mRNA_L-elsbetiae_contig9394.18388.1 vs. uniprot
Match: A0A6H5L722_9PHAE (FGGY_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L722_9PHAE) HSP 1 Score: 155 bits (391), Expect = 1.140e-41 Identity = 87/129 (67.44%), Postives = 95/129 (73.64%), Query Frame = 1 Query: 1 ILPFFSGERSPGYNDDATACVLGLRRSTTRAQLVRAGLESVCLRLAAVVDLM---TGGGG-----------------------DGADVVTSGNAFAASPFLRQVLADSLGRTVRASGVTEETSLGVAVL 309 +LPFFSGERSPGYNDDATAC+ GLRRSTTR QLVRAGLESVCLRLA +VDLM T GG + A+VVTSGNAFAASPF R++LADSLGRTVRASG TEETSLGVAV+ Sbjct: 989 VLPFFSGERSPGYNDDATACIFGLRRSTTRPQLVRAGLESVCLRLAVIVDLMKDLTDGGSMKGSSSNEHEPETFSAGALVRDHEDAEVVTSGNAFAASPFWRKILADSLGRTVRASGATEETSLGVAVI 1117
BLAST of mRNA_L-elsbetiae_contig9394.18388.1 vs. uniprot
Match: A0A3D5G0S2_9CHLR (FGGY_C domain-containing protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A3D5G0S2_9CHLR) HSP 1 Score: 97.4 bits (241), Expect = 4.650e-23 Identity = 53/103 (51.46%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 1 ILPFFSGERSPGYNDDATACVLGLRRSTTRAQLVRAGLESVCLRLAAVVDLMTGGGGDGADVVTSGNAFAASPFLRQVLADSLGRTVRASGVTEETSLGVAVL 309 +LPF GERSPG+ DDAT V+GLR ST+ ++VRAGLESV R A + D ++G G ++V G A +SP Q+ AD LGRTV SG E TS G A+L Sbjct: 44 VLPFLRGERSPGWLDDATGAVIGLRASTSPVEIVRAGLESVAYRFALIADRLSGVVSPGPEIVVGGGAAQSSPTWLQMFADVLGRTVVESGEPETTSRGGAIL 146
BLAST of mRNA_L-elsbetiae_contig9394.18388.1 vs. uniprot
Match: A0A2E9TD61_9CHLR (Carbohydrate kinase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A2E9TD61_9CHLR) HSP 1 Score: 97.4 bits (241), Expect = 1.610e-21 Identity = 53/103 (51.46%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 1 ILPFFSGERSPGYNDDATACVLGLRRSTTRAQLVRAGLESVCLRLAAVVDLMTGGGGDGADVVTSGNAFAASPFLRQVLADSLGRTVRASGVTEETSLGVAVL 309 +LPF GERSPG+ DDAT V+GLR ST+ ++VRAGLESV R A + D ++G G ++V G A +SP Q+ AD LGRTV SG E TS G A+L Sbjct: 346 VLPFLRGERSPGWLDDATGAVIGLRASTSPVEIVRAGLESVAYRFALIADRLSGVVSPGPEIVVGGGAAQSSPTWLQMFADVLGRTVVESGEPETTSRGGAIL 448
BLAST of mRNA_L-elsbetiae_contig9394.18388.1 vs. uniprot
Match: A0A800EVQ5_9CHLR (Carbohydrate kinase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A800EVQ5_9CHLR) HSP 1 Score: 91.7 bits (226), Expect = 1.820e-19 Identity = 51/103 (49.51%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 1 ILPFFSGERSPGYNDDATACVLGLRRSTTRAQLVRAGLESVCLRLAAVVDLMTGGGGDGADVVTSGNAFAASPFLRQVLADSLGRTVRASGVTEETSLGVAVL 309 +LPF GERSPG+ DDAT V+GLR ST+ ++VRAGLESV R A + D ++ G ++V G A +SP Q+ AD L RTV SG E TS G A+L Sbjct: 344 VLPFLRGERSPGWLDDATGAVVGLRASTSPVEIVRAGLESVAFRFALIADRLSTVVTPGPEIVVGGGAAQSSPTWLQMFADVLDRTVVESGEAEATSRGSAIL 446
BLAST of mRNA_L-elsbetiae_contig9394.18388.1 vs. uniprot
Match: A0A4D9DA94_9STRA (FGGY_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA94_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 8.100e-18 Identity = 53/103 (51.46%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 1 ILPFFSGERSPGYNDDATACVLGLRRSTTRAQLVRAGLESVCLRLAAVVDLMTGGGGDGADVVTSGNAFAASPFLRQVLADSLGRTVRASGVTEETSLGVAVL 309 ILPF SGER+PG+ +ATA +LGL + TT A + RAG+E+V LRLAA+V LM G V SG A S RQ+LAD+LG V E TS GVA L Sbjct: 368 ILPFLSGERAPGWCPNATASILGLTKQTTGADVYRAGMEAVALRLAAIVRLMRPHLGQNLVVGASGTALERSGLWRQILADALGLEVVLEEQGEATSKGVAAL 470
BLAST of mRNA_L-elsbetiae_contig9394.18388.1 vs. uniprot
Match: W7U236_9STRA (Carbohydrate kinase fggy n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U236_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 8.500e-18 Identity = 53/103 (51.46%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 1 ILPFFSGERSPGYNDDATACVLGLRRSTTRAQLVRAGLESVCLRLAAVVDLMTGGGGDGADVVTSGNAFAASPFLRQVLADSLGRTVRASGVTEETSLGVAVL 309 ILPF SGER+PG+ +ATA +LGL + TT A + RAG+E+V LRLAA+V LM G V SG A S RQ+LAD+LG V E TS GVA L Sbjct: 517 ILPFLSGERAPGWCPNATASILGLTKQTTGADVYRAGMEAVALRLAAIVRLMRPHLGQNLVVGASGTALERSGLWRQILADALGLEVVLEEQGEATSKGVAAL 619
BLAST of mRNA_L-elsbetiae_contig9394.18388.1 vs. uniprot
Match: A0A485KQ82_9STRA (Aste57867_10100 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQ82_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.850e-16 Identity = 46/103 (44.66%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 1 ILPFFSGERSPGYNDDATACVLGLRRSTTRAQLVRAGLESVCLRLAAVVDLMTGGGGDGADVVTSGNAFAASPFLRQVLADSLGRTVRA-SGVTEETSLGVAV 306 ILPFF+GER+PG+++DAT + G++ STT ++RA +ESV LRLA + L A +V+SG A +SP RQ++AD +GR V + E TS G+A+ Sbjct: 395 ILPFFNGERAPGWHEDATCVISGIKISTTPVHMLRALMESVALRLATIHALFGNVASPNAVLVSSGTALGSSPLWRQIIADCIGRPVWIETDAIELTSRGIAI 497
BLAST of mRNA_L-elsbetiae_contig9394.18388.1 vs. uniprot
Match: H3HD73_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HD73_PHYRM) HSP 1 Score: 82.8 bits (203), Expect = 2.640e-16 Identity = 44/104 (42.31%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 1 ILPFFSGERSPGYNDDATACVLGLRRSTTRAQLVRAGLESVCLRLAAVVDLMTGGGGDGADVVTSGNAFAASPFLRQVLADSLGRT-VRASGVTEETSLGVAVL 309 +LPF SGER+PG+ ++AT + G+ + TT + +RAG+ES+ LR+ + L+ A VV SG A +SP RQ++AD LG+ + + TE TS G+AVL Sbjct: 683 VLPFLSGERAPGWLENATCTITGINKWTTPIEFLRAGMESIALRIGVLFSLLAFSADLDATVVVSGTALTSSPVWRQMIADCLGKKLILEASATETTSRGLAVL 786
BLAST of mRNA_L-elsbetiae_contig9394.18388.1 vs. uniprot
Match: A0A8K1CBP2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBP2_PYTOL) HSP 1 Score: 82.4 bits (202), Expect = 3.500e-16 Identity = 45/103 (43.69%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 1 ILPFFSGERSPGYNDDATACVLGLRRSTTRAQLVRAGLESVCLRLAAVVDLMTGGGGDGADVVTSGNAFAASPFLRQVLADSLGRTVRA-SGVTEETSLGVAV 306 +LPF SGER+PG++D+AT ++G+ + T L++AG+E+V LR+A V L+ A V+ SG A +S RQ+LAD +GR + + TE TS GVAV Sbjct: 431 VLPFLSGERAPGWHDEATCTIMGINKWTKPVDLLQAGMEAVALRIALVFSLLAEYADSDAAVIASGTALTSSKTWRQMLADCIGRELAMETHATEATSRGVAV 533 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9394.18388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9394.18388.1 >prot_L-elsbetiae_contig9394.18388.1 ID=prot_L-elsbetiae_contig9394.18388.1|Name=mRNA_L-elsbetiae_contig9394.18388.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=103bp ILPFFSGERSPGYNDDATACVLGLRRSTTRAQLVRAGLESVCLRLAAVVDback to top mRNA from alignment at L-elsbetiae_contig9394:317..697+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9394.18388.1 ID=mRNA_L-elsbetiae_contig9394.18388.1|Name=mRNA_L-elsbetiae_contig9394.18388.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=381bp|location=Sequence derived from alignment at L-elsbetiae_contig9394:317..697+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9394:317..697+ >mRNA_L-elsbetiae_contig9394.18388.1 ID=mRNA_L-elsbetiae_contig9394.18388.1|Name=mRNA_L-elsbetiae_contig9394.18388.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=618bp|location=Sequence derived from alignment at L-elsbetiae_contig9394:317..697+ (Laminarionema elsbetiae ELsaHSoW15)back to top |