mRNA_L-elsbetiae_contig9366.18363.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9366.18363.1 vs. uniprot
Match: D8LHG8_ECTSI (BEACH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG8_ECTSI) HSP 1 Score: 285 bits (730), Expect = 1.750e-84 Identity = 153/237 (64.56%), Postives = 167/237 (70.46%), Query Frame = 1 Query: 88 PRLVPCTRLHAGLIPLYAPIVESTDGIFLLFACLPFRLTALTQLCREVRAERGVRGRRSLHSTDLIVRFVFYQLLRAVDFLHARGIAVGNLGSSSILLTEHLWVQVAPSIPPLLLDDGHTQPRRPREGGLLRPPFGVASPXXXXXXPPGEDLPLTYRWVKGMVSNLEYLLAVNAAAGRVVGDRSCHPIVPWVCDFTRKVAEEESVGGAEKEQEHGGGVGWRDLTMTKFRLNKGDAQV 798 P L PCTRLHAGL PLY+P+V S D F++FACLPFRLTALTQLCR R G RR +S DL+VRFVFYQLLRAVDFLH++GI VGNL S SILLTE+LWVQ+ PSIP LL G L R P ASP PG+DLPLTYRWVKGMVSNLEYLLAVNAAAGR+VGDRSCHPIVPWVCD +V EE G GWRDLT TKFRL KGDAQ+ Sbjct: 190 PLLEPCTRLHAGLAPLYSPLVRSDDKAFVMFACLPFRLTALTQLCRAKRGIPGTGRRRDRNSVDLVVRFVFYQLLRAVDFLHSKGITVGNLSSGSILLTENLWVQITPSIPLLL---GRQXXXXXXXXALSRQP--QASPRRS----PGDDLPLTYRWVKGMVSNLEYLLAVNAAAGRMVGDRSCHPIVPWVCDLLHRVTEEXXXXXXXXXXXXEG-TGWRDLTKTKFRLKKGDAQL 416
BLAST of mRNA_L-elsbetiae_contig9366.18363.1 vs. uniprot
Match: A0A6H5KNG5_9PHAE (BEACH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNG5_9PHAE) HSP 1 Score: 199 bits (505), Expect = 2.630e-54 Identity = 130/258 (50.39%), Postives = 144/258 (55.81%), Query Frame = 1 Query: 37 EEGGTAEEKATRAPSSTPRLVPCTRLHAGLIPLYAPIVESTDGIFLLFACLPFRLTALTQLCREVRAERGVRGRRSLHSTDLIVRFVFYQLLRAVDFLHARGIAVGNLGSSSILLTEHLWVQVAPSIPPLLLDDGHTQPRRPREG--GLLRPPFGVASPXXXXXXPPGEDLPLTYRWVKGMVSNLEYLLAVNAAAGRVVGDRSCHPIVPWVCDFTRKVAEEES--VGGAEKEQEHGGGVGWRDLTMTKFRLNKGDAQV 798 ++G AE +A P L PCTRLHAGL PLY+P+V S D F + + L A + R L S A+GI VGNL SSSILLTE+LWVQ+APSIP LL H L R P ASP PG DLPLTYRWVKGMVSNLEYLLAVNAAAGR+VGDRSCHPIVPWVCD +V EEE GG E G GWRDLT +KFRL KGDAQV Sbjct: 177 DDGNNAERQAL-----PPLLEPCTRLHAGLAPLYSPLVRSDDNAF---------VARVLALWNHRPARPPLVSRSCLLSPPA-----------------AKGITVGNLSSSSILLTENLWVQIAPSIPLLLGRQQHQXXXXXXXXXQALSRQP--QASPRRS----PGHDLPLTYRWVKGMVSNLEYLLAVNAAAGRMVGDRSCHPIVPWVCDLLHQVTEEEEKVAGGVWGGGE---GTGWRDLTKSKFRLKKGDAQV 394
BLAST of mRNA_L-elsbetiae_contig9366.18363.1 vs. uniprot
Match: A0A5D6XMC0_9STRA (BEACH domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMC0_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.220e-23 Identity = 71/185 (38.38%), Postives = 92/185 (49.73%), Query Frame = 1 Query: 274 TDLIVRFVFYQLLRAVDFLHARGIAVGNLGSSSILLTEHLWVQVAPSIPPLLLDDGHTQPRRPREGGLLRPPFGVASPXXXXXXPPGEDL----------PLTYRWVKGMVSNLEYLLAVNAAAGRVVGDRSCHPIVPWVCDFTRKVAEEESVGGAEKEQEHGGGVGWRDLTMTKFRLNKGDAQV 798 +DL RF+ YQL R + FLHARG+A G G S +LLT+ LWV++ ++P DG + EG P G+ L +T RW +G VSN EYL+ +NAAAGR + D HP +PWV F + A GWRDLT +KFRLNKGD Q+ Sbjct: 395 SDLKRRFLVYQLHRVLQFLHARGLACGGFGPSDVLLTDTLWVRLG-TLPIAGRSDGWEE----EEGAAAAPASCRWEATVKRDARQGDRLCRSVSSLDSRSITERWCEGDVSNFEYLMLLNAAAGRRMVDSVFHPFLPWVSGFRSRDA------------------GWRDLTKSKFRLNKGDDQL 556
BLAST of mRNA_L-elsbetiae_contig9366.18363.1 vs. uniprot
Match: A0A0P1B182_PLAHL (Lysosomal trafficking regulator LYST and related BEACH and WD40 repeat proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B182_PLAHL) HSP 1 Score: 109 bits (273), Expect = 2.250e-23 Identity = 83/244 (34.02%), Postives = 115/244 (47.13%), Query Frame = 1 Query: 106 TRLHAGLIPLYAPIVESTDGIFLLFACLPFRLTALTQLCREVRA--------ERGVRGRRSLHST---DLIVRFVFYQLLRAVDFLHARGIAVGNLGSSSILLTEHLWVQVA--PSIPPLLLDDGHTQPRRPREGGLLRPPFGVASPXXXXXXPPGEDLPLTYRWVKGMVSNLEYLLAVNAAAGRVVGDRSCHPIVPWVCDFTRKVAEEESVGGAEKEQEHGGGVGWRDLTMTKFRLNKGDAQV 798 T L+A + PL ++E T ++A + +L + + +A E VR R D+ RFV +QL RA+ FLHA+G+A S + L++ LW+ +A P + ++DG T G P V S +T RW G +SNLEYLL +N+AAGR + D HP VPWV DFT G GWRDL+ +KFRLNKGDAQ+ Sbjct: 152 TPLNAHMPPLRGLLIEKTTDSSCVYAVFEYTAQSLLDVLKYNQAVLKGQSSVELDVRVLREDEQDALGDVKKRFVLFQLCRALAFLHAQGMACDGFSSRELNLSDTLWLHLATSPRVLNTRIEDGAT-------GTAWTIPRAVESYTSRS---------VTERWCTGDLSNLEYLLILNSAAGRRMEDGVFHPFVPWVTDFTS-----------------GPHSGWRDLSKSKFRLNKGDAQL 362
BLAST of mRNA_L-elsbetiae_contig9366.18363.1 vs. uniprot
Match: A0A482SQA2_9ARCH (BEACH domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQA2_9ARCH) HSP 1 Score: 107 bits (267), Expect = 1.390e-22 Identity = 63/174 (36.21%), Postives = 95/174 (54.60%), Query Frame = 1 Query: 277 DLIVRFVFYQLLRAVDFLHARGIAVGNLGSSSILLTEHLWVQVAPSIPPLLLDDGHTQPRRPREGGLLRPPFGVASPXXXXXXPPGEDLPLTYRWVKGMVSNLEYLLAVNAAAGRVVGDRSCHPIVPWVCDFTRKVAEEESVGGAEKEQEHGGGVGWRDLTMTKFRLNKGDAQV 798 DL +RF+ YQLL AV ++H G+ + +L ++ L + +W+ + P + +L Q R + LR P V P++ +W+ G VSNLEYL+A+N AAGR + D HP++PWV DF+ ++ + G K +RDL MTKFRL+KGDAQ+ Sbjct: 84 DLRLRFIIYQLLHAVCYIHQAGLCLDSLLPCNVHLDDDMWLSIPPGLSNRVLQALQLQVRN--DALSLRIPRSVDYYE-----------PISIQWIAGKVSNLEYLMAINYAAGRTMVDPLYHPLIPWVTDFSASCLDD--IHGNNKHS-------FRDLHMTKFRLSKGDAQL 235
BLAST of mRNA_L-elsbetiae_contig9366.18363.1 vs. uniprot
Match: A0A662WYB6_9STRA (BEACH domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYB6_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.370e-22 Identity = 71/174 (40.80%), Postives = 87/174 (50.00%), Query Frame = 1 Query: 277 DLIVRFVFYQLLRAVDFLHARGIAVGNLGSSSILLTEHLWVQVAPSIPPLLLDDGHTQPRRPREGGLLRPPFGVASPXXXXXXPPGEDLPLTYRWVKGMVSNLEYLLAVNAAAGRVVGDRSCHPIVPWVCDFTRKVAEEESVGGAEKEQEHGGGVGWRDLTMTKFRLNKGDAQV 798 DL R V QL R + FLHARG+A L + L++ LW+Q+A ++P +L PR+ VAS LT RW G VSNLEYL+A+N AAGR + D HP VPWV DFT G GWRDLT +KFRL KGDAQ+ Sbjct: 235 DLKKRLVLLQLRRLLRFLHARGLACNGLRPQDLQLSDTLWLQLA-TLPQVLATSSGPPAPLPRD---------VAS---------CSSRSLTDRWRTGDVSNLEYLMALNLAAGRRLEDGGLHPFVPWVTDFTS-----------------GPRGGWRDLTKSKFRLAKGDAQL 372
BLAST of mRNA_L-elsbetiae_contig9366.18363.1 vs. uniprot
Match: A0A662YAI9_9STRA (BEACH domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YAI9_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.370e-22 Identity = 71/174 (40.80%), Postives = 86/174 (49.43%), Query Frame = 1 Query: 277 DLIVRFVFYQLLRAVDFLHARGIAVGNLGSSSILLTEHLWVQVAPSIPPLLLDDGHTQPRRPREGGLLRPPFGVASPXXXXXXPPGEDLPLTYRWVKGMVSNLEYLLAVNAAAGRVVGDRSCHPIVPWVCDFTRKVAEEESVGGAEKEQEHGGGVGWRDLTMTKFRLNKGDAQV 798 DL R V QL R + FLHARG+A L + L++ LW+Q+A ++P +L T PR+ VAS LT RW G V NLEYLLA+N AAGR + D HP VPWV DFT G GWRDL +KFRL KGDAQ+ Sbjct: 234 DLKKRLVLLQLRRLLRFLHARGLACNGLRPQDLQLSDTLWLQLA-TLPQVLATSSSTPSPLPRD---------VAS---------YSSRSLTDRWRTGDVGNLEYLLALNLAAGRRLEDGGLHPFVPWVTDFTS-----------------GPRGGWRDLNKSKFRLAKGDAQL 371
BLAST of mRNA_L-elsbetiae_contig9366.18363.1 vs. uniprot
Match: A0A1B6KU36_9HEMI (BEACH domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KU36_9HEMI) HSP 1 Score: 100 bits (248), Expect = 7.240e-22 Identity = 70/226 (30.97%), Postives = 101/226 (44.69%), Query Frame = 1 Query: 112 LHAGLIPLYAPIVESTDGIFLLFACLPFRLTALTQLCREVRAERGVRGRRSLHSTDLIVRFVFYQLLRAVDFLHARGIAVGNLGSSSILLTEHLWVQVAPSIPPLLLDDGHTQPRRPREGGLLRPPFGVASPXXXXXXPPGEDLPLTYRWVKGMVSNLEYLLAVNAAAGRVVGDRSCHPIVPWVCDFTRKVAEEESVGGAEKEQEHGGGVGWRDLTMTKFRLNKGD 789 LH L+P + EST L++ +P L V + G T+ + F+ YQLL + +H G+ + ++ S I + HLW+QV P + + + P +P+ +P + LT WV+G +SNLEYL A+N AGR GD CH ++PWV DF+ G WRDLT +KFRLNKGD Sbjct: 35 LHPNLLPCIVAL-ESTKYFILVYENVPGHT-----LLDCVTFSPAILG------TNSKMLFLVYQLLCLLRHIHDLGLVLADITLSDIYVDSHLWIQVTPKLEANIYE----LPSKPQSA--------QTTPSVERTEKSQDINTLTLAWVRGAISNLEYLTALNNLAGRRYGDPRCHHVLPWVTDFSSP-----------------NGANWRDLTKSKFRLNKGD 219
BLAST of mRNA_L-elsbetiae_contig9366.18363.1 vs. uniprot
Match: A0A1B6GLY0_9HEMI (BEACH domain-containing protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6GLY0_9HEMI) HSP 1 Score: 99.4 bits (246), Expect = 1.210e-21 Identity = 61/176 (34.66%), Postives = 88/176 (50.00%), Query Frame = 1 Query: 274 TDLIVRFVFYQLLRAVDFLHARGIAVGNLGSSSILLTEHLWVQVAPSIPPLLLDDGHTQPRRPREGGLLRPPFGVASPXXXXXXPPGEDL-PLTYRWVKGMVSNLEYLLAVNAAAGRVVGDRSCHPIVPWVCDFTRKVAEEESVGGAEKEQEHGGGVGWRDLTMTKFRLNKGDAQV 798 T+ + F+ YQLL + +H G+ + ++ S I + HLW+QV P + + + P RP+ P ++S D+ LT WV+G +SNL+YL A+N AGR GD CH ++PWV DF+ G WRDLT +KFRLNKGD Q+ Sbjct: 56 TNSKILFLVYQLLCLLRHIHDLGLVLADITLSDIYVDSHLWIQVTPKLEANIYE----LPPRPQ------PDQEISS---IEKTKKSRDINSLTLAWVRGAMSNLDYLTALNNLAGRRFGDPRCHHVLPWVTDFSSP-----------------NGANWRDLTKSKFRLNKGDRQL 201
BLAST of mRNA_L-elsbetiae_contig9366.18363.1 vs. uniprot
Match: A0A3Q0IUF7_DIACI (uncharacterized protein LOC103509915 n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A3Q0IUF7_DIACI) HSP 1 Score: 104 bits (259), Expect = 1.520e-21 Identity = 62/171 (36.26%), Postives = 89/171 (52.05%), Query Frame = 1 Query: 292 FVFYQLLRAVDFLHARGIAVGNLGSSSILLTEHLWVQVAPSIPPLLLDDGHTQPRRPREGGLLRPPFG--VASPXXXXXXPPGEDLPLTYRWVKGMVSNLEYLLAVNAAAGRVVGDRSCHPIVPWVCDFTRKVAEEESVGGAEKEQEHGGGVGWRDLTMTKFRLNKGDAQV 798 F+ YQLL + LH R + +G + + I +TE+LW+QV P I + + H P P L +P +A P P + L +WV G +SN +Y+ ++N +GR GD SCH + PWV DF+ G++ G WRDLT +KFRLNKGD Q+ Sbjct: 377 FIVYQLLNVMRDLHDRRLILGEITLADIYVTENLWIQVQPKITDNIYELPHC-PSSPNPPPLSKPSHSPHLAHPTSTDLNPDLDTL--VKQWVAGALSNFDYIYSLNVLSGRKYGDPSCHFVFPWVTDFS----------GSD-------GSNWRDLTKSKFRLNKGDRQL 527 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9366.18363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9366.18363.1 >prot_L-elsbetiae_contig9366.18363.1 ID=prot_L-elsbetiae_contig9366.18363.1|Name=mRNA_L-elsbetiae_contig9366.18363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp STIGAAGPGARREEGGTAEEKATRAPSSTPRLVPCTRLHAGLIPLYAPIVback to top mRNA from alignment at L-elsbetiae_contig9366:5572..7303+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9366.18363.1 ID=mRNA_L-elsbetiae_contig9366.18363.1|Name=mRNA_L-elsbetiae_contig9366.18363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1732bp|location=Sequence derived from alignment at L-elsbetiae_contig9366:5572..7303+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9366:5572..7303+ >mRNA_L-elsbetiae_contig9366.18363.1 ID=mRNA_L-elsbetiae_contig9366.18363.1|Name=mRNA_L-elsbetiae_contig9366.18363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig9366:5572..7303+ (Laminarionema elsbetiae ELsaHSoW15)back to top |