mRNA_L-elsbetiae_contig936.18355.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig936.18355.1
Unique NamemRNA_L-elsbetiae_contig936.18355.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 2.030e-49
Identity = 122/283 (43.11%), Postives = 155/283 (54.77%), Query Frame = 1
Query:   70 SRRNLQSTVEVDVMFLYD-EAALERGIASTPEQMETLIADELPASNEAAENSLI-DLRFNLVHAGPLPYTVETENH--------NSEIFNLRINDAVKDLRDQYQADLVVMVGVFPDVCGSAY-FNPSTEPSDEIFGYGLVDIFCFDGRVTSHEIGHNMGASHDRVNSRFPTDYGHGLRYCADDGSERFRTIMAY---NCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGTSEANNARVLRENMVVVSNFRVGNSGLSCIPGVPGILDNDVCCPTSCGACG 876
            S R+LQ T  +DV+  Y  EAA   GI+    Q+ T I + +   N+A  NS I DL + LVH   LPY+  T +           E+  L  N AV DLR++YQ DLV +VG FP  CG  Y FN + E     FG+ LV   CFD    +HEI HNMG  HDR NS    +Y HG RYC   GS+ +RTIM+Y    C  +  P E+     +VNYFSNP+V YL  PTGT+ A+NAR + E+MV VSNFR     +    G    +D D CC   CG+ G
Sbjct:  342 SDRSLQGTTVIDVLIFYSPEAASSEGISDA--QLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYSQMTYDPIDSDDIDLEPELDALAANSAVNDLRNEYQGDLVQLVGYFPGTCGLGYIFNGNAE-----FGFSLVGSNCFDNFSHTHEIAHNMGCYHDRDNSETQDEYRHGYRYCT--GSDPYRTIMSYYQNGCGGDPTP-EADPIVPQVNYFSNPEVTYLNKPTGTATADNARCIEESMVAVSNFRADGDFICSDDGDACAVDID-CCVGFCGSAG 613          
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 3.290e-44
Identity = 116/287 (40.42%), Postives = 153/287 (53.31%), Query Frame = 1
Query:   52 RNSAPLSRRNLQSTVEVDVMFLYD-EAALERGIASTPEQMETLIADELPASNEAAENS-LIDLRFNLVHAGPLPYTV------ETENHNSEIFNLRINDAVKDLRDQYQADLVVMVGVFPDVCGSAY-FNPSTEPSDEIFGYGLVDIFCFDGRVTSHEIGHNMGASHDRVNSRFPTDYGHGLRYCADDGSERFRTIMAY---NCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGTSEANNARVLRENMVVVSNFRVGNSGLSCIPGVPGILDNDVCCPTSCGACG 876
            R+    S R LQ T  +DV+ +Y  EAA  RGIA    Q+ T I + +   N+A  NS +  L + LV    LPY+       +  +   E+  L  N  V DLR+QYQ DLV +VG FP  CG  Y FN      D  FG+ LVD  CFD    +HEI HNMG  HD+ NS     Y HG RYC  +G++ +RTIM+Y    C  +   ++      RVNYFSNP+V YL   TGT+ A+NAR + ++MV VS FR     +    G    +D+D CC   CG+ G
Sbjct:  158 RSQGMSSDRRLQGTTVIDVLIVYSPEAAYARGIAEA--QLLTRIVEGMVTLNQAITNSGIAGLEYRLVQVAELPYSQMAYIPSDDIDLKPELDALAANSNVTDLRNQYQGDLVQLVGYFPGTCGLGYIFN-----GDAAFGFSLVDSNCFDNFSHTHEIAHNMGCYHDKNNSDTQHAYRHGWRYC--EGADPYRTIMSYYHNGCGGDPTSEDDPI-VPRVNYFSNPNVTYLNKSTGTAAADNARCIEDSMVAVSEFRDDGDFVCSDDGDTCTVDSD-CCVGFCGSAG 433          
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: UPI00198C5885 (Uncharacterized protein n=1 Tax=Herminiimonas sp. TaxID=1926289 RepID=UPI00198C5885)

HSP 1 Score: 124 bits (311), Expect = 1.880e-28
Identity = 83/237 (35.02%), Postives = 122/237 (51.48%), Query Frame = 1
Query:   82 LQSTVEVDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLIDLRFNLVHAGPLPYTVETENHNSEIFNLRINDAVKDLRDQYQADLVVMVGVFPDVCGSAYFNPSTEPSDEIFGYGLVDIFCFDGRVT-SHEIGHNMGASHDRVNSRFPTDYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGT-SEANNARVLRENMVVVSNFR 786
            +   V +DVM  Y  A +   +A     +   +A+    +N+A  NS + ++ NLV   P+PY+   +++N+ + +L     VK  R+   AD+VVM+      CG AY  PS +     F  G+V+  C  G  +  HEIGH  G  HD V S   T Y +G  Y + + +  +RTIMAYNC         S    R+ YFSNP+++Y GL  GT + ++NARVL E    VS FR
Sbjct:  197 VDGKVVIDVMVAYP-ATVTAAVADVTGLITLAVAE----TNQAYINSGVKIQMNLVGTMPIPYSETGKDYNTMLNDLNAMPDVKLQRNNLGADIVVMLSTNSSYCGMAYMGPSAD-----FAAGVVNYSCATGYYSFGHEIGHMQGLQHDPVTSPGTTPYAYGHGYQSTNSAPSWRTIMAYNC---------SPGCSRLQYFSNPNLNYNGLAMGTPTVSDNARVLNETAASVSLFR 414          
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A0F2IZ28_9BACT (Peptidyl-Asp metalloendopeptidase n=1 Tax=Candidatus Magnetoovum chiemensis TaxID=1609970 RepID=A0A0F2IZ28_9BACT)

HSP 1 Score: 122 bits (307), Expect = 1.660e-27
Identity = 85/252 (33.73%), Postives = 129/252 (51.19%), Query Frame = 1
Query:   67 LSRRNLQSTVEVDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLIDLRFNLVHAGPLPYTVETENHNSEIFNLRIN-----DAVKDLRDQYQADLVVM-VGVFPDVCGSAYFNPSTEPSDEIFGYGLVDIFCFDGRVT-SHEIGHNMGASHDRVNSRFPTDYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGTS-----EANNARVLRENMVVVSNFR 786
            L +     T  +DV+ +Y  AA  +  A +   +E+LI      +NE+  NS ID+  N+VH     YT ET + ++E+  LR       D++  LRD Y ADLV + V    + CG  Y   +   S   + + +V   C  G  T +HE+GHNMGA HDR  +     Y +   Y   + ++++RTIMAYN +      ++ ++  R+NY+SNPDV Y G+PTG S      ANNA  L      ++ F+
Sbjct:  217 LDKNKRSGTTTIDVLVVYTSAA--KTAAGSQSAIESLITLAETEANESFTNSGIDIELNVVHTAQTNYT-ET-SMSTELSALRNTNDGKMDSIHTLRDDYGADLVQLWVSNGTNYCGLGYLMTNVSSSFASYAFSVVRYDCATGTYTFAHELGHNMGAEHDRYVATTEGAYSYSYGYV--NTTDKWRTIMAYNDKCS----DNGYNCTRINYWSNPDVSYDGVPTGKSASASNSANNALTLTNTAATIAAFK 458          
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: D8LMP2_ECTSI (Peptidyl-Asp metallopeptidase. metallo peptidase. MEROPS family M72 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP2_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 1.820e-27
Identity = 72/170 (42.35%), Postives = 92/170 (54.12%), Query Frame = 1
Query:   97 EVDVMFLYD-EAALERGIASTPEQMETLIADELPASNEAAENSLI-DLRFNLVHAGPLPYTVETENHNS------EIFNLRINDAVKDLRDQYQADLVVMVGVFPDVCGSAY-FNPSTEPSDEIFGYGLVDIFCFDGRVTSHEIGHNMGASHDRVNSRFPTDYGHGLRYC 579
            ++DV+  Y  EAA   GI+    Q+ T I + +   N+A  NS I DL + LVH   LPY+  T + N       E+  L  +  V DLRDQYQ DLV +VG FP  CG  Y FN + E     +G+ LV   CFD    +HEI HNMG  HDR+NS     + HG RYC
Sbjct:   12 KIDVLIFYSPEAASSEGISDA--QLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYSQMTYDPNDDIDLGPELDALAADSDVDDLRDQYQGDLVQLVGYFPGTCGLGYVFNGNAE-----YGFSLVGSNCFDNFSHTHEIAHNMGCYHDRLNSGPQDAFRHGYRYC 174          
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A532EBT1_9BACT (Uncharacterized protein n=2 Tax=unclassified Nitrospira TaxID=2652172 RepID=A0A532EBT1_9BACT)

HSP 1 Score: 119 bits (298), Expect = 2.150e-26
Identity = 90/259 (34.75%), Postives = 128/259 (49.42%), Query Frame = 1
Query:  100 VDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLIDLRFNLVHAGPLPYTVETENHNSEIFNLR-INDAVKD----LRDQYQADLVVMV-GVFPDVCGSAYFNPSTEPSDEIFGYGLVDIFCFDGRVTSHEIGHNMGASHDRVNS---RFPTDYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGL-PTG-------TSEANNARVLRENMVVVSNFRVGNSGLSCIPGVP 825
            +DV+ +Y   A  +        +E LIA  +  +N A  NS I+ +F LVH     Y  ET N+N+++ +LR  ND   D    LR+ ++ADLV ++     D CG AY   S   +     + +V+  C  G   +HE+GHNMG+ HDRV      +P  +GH         + +FRTIMAY C         S S  R+N+FSNP+V Y G   TG        + A+NAR     +  V+NFR  NSG +  P  P
Sbjct:  222 IDVLAVYTTTA--KNANGGQNGIEALIALGISLANTAFTNSQINTQFRLVHTAEADYA-ETGNYNTDLSHLRSTNDGFMDEVHALRNAHKADLVTLIEDNIGDACGVAYVMSSVSANFANSAFSVVEDDCISGYTLAHELGHNMGSMHDRVEGGTGAYPYSFGH-------KEAGKFRTIMAYPC---------SPSCPRINHFSNPNVSYQGTWQTGIDHNTSPATSADNARAFTNALSTVANFR--NSGDTTAPPAP 459          
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A1Q8QFJ7_9DELT (Uncharacterized protein n=1 Tax=Desulfovibrio sp. DV TaxID=1844708 RepID=A0A1Q8QFJ7_9DELT)

HSP 1 Score: 119 bits (297), Expect = 2.410e-26
Identity = 84/242 (34.71%), Postives = 116/242 (47.93%), Query Frame = 1
Query:  100 VDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLIDLRFNLVHAGPLPYTVET--ENHNSEIFNLR-----INDAVKDLRDQYQADLVVMVGVFPDVCGSAYFNPSTEPSDEIFGYGLVDIFCFDGRVT-SHEIGHNMGASHDRVNSRFPTDYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGT-----SEANNARVLRENMVVVSNFR 786
            +DVM LY  +A  R  A     M+ LIA     +N+    S +  RF LVHA  + Y  +T     N+ + +L+     + D +  LRDQY AD+V ++      CG  Y   ST        + +VD  C  G  + +HE GHN GA HDR ++     Y +   Y     S  FRTIMAY+C         S    RVNY+SNPDV+Y G PTG      + A+N R L     + +N+R
Sbjct:  196 IDVMVLYTPSA--RAAAGGGPAMQALIALAFSETNQGYAQSGVIQRFRLVHAQEVAYVEDTGSSGFNTALDSLQNPSDGVMDEIHALRDQYGADIVSLLINNGWYCGLGYLMTSTNWDFAANAFNVVDYSCATGYYSFAHECGHNQGAHHDRGSASGSILYSYAYGYQQTAASPAFRTIMAYDC---------SAGCTRVNYWSNPDVNYNGFPTGVLYSAGNAADNRRTLNNTRTIAANWR 426          
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A839HE77_9GAMM (Fibronectin type III domain-containing protein n=1 Tax=Thiospirillum jenense TaxID=1653858 RepID=A0A839HE77_9GAMM)

HSP 1 Score: 115 bits (287), Expect = 1.940e-24
Identity = 79/239 (33.05%), Postives = 117/239 (48.95%), Query Frame = 1
Query:  100 VDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLIDLRFNLVHAGPLPYTVETENHNSEIFNLR-----INDAVKDLRDQYQADLVVMVGVFPDVCGSAYFNPSTEPSDEI--FGYGLVDIFCFDGRVTSHEIGHNMGASH--DRVNSRFPTDYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGTSEANNARVLRENMVVVSNFRV 789
            +D+M +Y   A+ +    T + +++ I   + A+N A +NS I++  N V+ G + YT E     + +  L+     I D +  LRDQY ADLVV+V    D CG  Y   S+  S     + + +V+  C      +HEIGH  G  H  +   S     Y +G R C       FR IM+Y+C              RV +FSNP+V Y GL TG+S AN A+ +     +V+NFRV
Sbjct:  280 IDLMVVYSPQAVSK--MGTEDALKSTITAAIAAANTAYDNSQINVALNPVYYGQVNYT-EPATMPTALTQLQSKTDGIIDDIHALRDQYSADLVVLVDTNTDYCGYGYIMNSSYTSSAFAPYAFAVVNYSCLSLNSLAHEIGHLQGNQHNTESTTSTGAYSYSYGYRVCGI-----FRDIMSYDCPTPNT------GTPRVLHFSNPNVTYQGLATGSSTANAAQTINNTAAIVANFRV 504          
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A2G2A1R6_9BACT (Ig-like domain-containing protein n=1 Tax=Phycisphaera sp. TaxID=2030824 RepID=A0A2G2A1R6_9BACT)

HSP 1 Score: 112 bits (280), Expect = 1.530e-23
Identity = 93/262 (35.50%), Postives = 129/262 (49.24%), Query Frame = 1
Query:  100 VDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLID-LRFNLVHAGPLPYTVETENHNSEIFNLR-----INDAVKDLRDQYQADLVVMVGVFPDVCGSAYFNPSTEPSDEIFGYGLVDIFCFDGRVT-SHEIGHNMGASHDRVNSRFPT-DYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGT-SEANNARVLRENMVVVSNFRVGNSGLSCIP-GVPGILDNDVCCP 855
            +DVM +Y   A   G   T   +  L  + +  +N    NS I  L  NLVH   + YT E+ +  ++I  LR       D V  LRD + ADLV M+    + CG  Y      P D  FG+ + D  C  G +T +HEIGHNMGA+HDR N+      Y +G R+ + +G   +R++MAY+               RV YFSNPD++Y+G PTG  +  +NAR        V+NFR  N    CI  G+ G  D+   CP
Sbjct:  215 IDVMIVYTAEA-RSGWGGTSAIL-ALAQNSINTTNLGYSNSDIGPLVLNLVHTEEVVYT-ESGSAGTDITRLRGTNDGFMDNVHSLRDTHAADLVAMLVNSFNACGVGYL----APFDAAFGFTVTDTGCAVGNLTFAHEIGHNMGATHDRNNAGGAVFSYAYGWRWNSTNGV-LYRSVMAYS------------PGSRVPYFSNPDINYIGTPTGVVNSEDNARCHDNTRDSVANFRDSNG---CITFGISGQPDSQTACP 453          
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A1I1GBE4_9GAMM (Pre-peptidase C-terminal domain-containing protein n=1 Tax=Pseudoalteromonas denitrificans DSM 6059 TaxID=1123010 RepID=A0A1I1GBE4_9GAMM)

HSP 1 Score: 111 bits (277), Expect = 3.270e-23
Identity = 83/244 (34.02%), Postives = 121/244 (49.59%), Query Frame = 1
Query:   88 STVEVDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLIDLRFNLVHAGPLPYTVETENHNSEIFNLRIN-----DAVKDLRDQYQADLVVMVGVFPDVCGSAYFNPSTEPSDEIFGYGLVDIFCFDGRVT-SHEIGHNMGASHDRVN--SRFPTDYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGT-SEANNARVLRENMVVVSNFRVG 792
            ++ ++ ++ +Y  AA      S    + +LI   +  +N    NS I+ + ++VH   + YT E  N ++++  L        D V  LRDQY AD+VV+V      CG A    +   S     + +VD  C  G  +  HEIGH  GA H+  N  +  P DYGHG +    D   R+RT+MAYNC         +    R+NY+SNPD  Y G   GT S++NNARVL      ++NFR G
Sbjct:  170 ASADIKLLVVYTAAA-----KSKVADINSLIDLAVVETNTGYANSAINAQVSVVHKAQVTYT-EASNSSTDLTRLAATNDGYMDEVHTLRDQYGADVVVLVNDVNGYCGQADAIGANASS----AFVIVDYDCATGYYSFGHEIGHLQGARHNPENDPTTTPYDYGHGYQ----DPQSRWRTVMAYNC---------TSGCTRINYWSNPDKSYAGDVMGTNSDSNNARVLNLTSNAMANFRSG 390          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF50_9PHAE2.030e-4943.11LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
A0A6H5JRC1_9PHAE3.290e-4440.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00198C58851.880e-2835.02Uncharacterized protein n=1 Tax=Herminiimonas sp. ... [more]
A0A0F2IZ28_9BACT1.660e-2733.73Peptidyl-Asp metalloendopeptidase n=1 Tax=Candidat... [more]
D8LMP2_ECTSI1.820e-2742.35Peptidyl-Asp metallopeptidase. metallo peptidase. ... [more]
A0A532EBT1_9BACT2.150e-2634.75Uncharacterized protein n=2 Tax=unclassified Nitro... [more]
A0A1Q8QFJ7_9DELT2.410e-2634.71Uncharacterized protein n=1 Tax=Desulfovibrio sp. ... [more]
A0A839HE77_9GAMM1.940e-2433.05Fibronectin type III domain-containing protein n=1... [more]
A0A2G2A1R6_9BACT1.530e-2335.50Ig-like domain-containing protein n=1 Tax=Phycisph... [more]
A0A1I1GBE4_9GAMM3.270e-2334.02Pre-peptidase C-terminal domain-containing protein... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig936contigL-elsbetiae_contig936:19700..23684 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score121.7
Seed ortholog evalue6.9e-25
Seed eggNOG ortholog1304872.JAGC01000003_gene3276
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Metallo-peptidase family M12B Reprolysin-like
EggNOG OGs1PHGX@1224,2MEPR@213115,2X1BB@28221,437VV@68525,COG3291@1,COG3291@2
COG Functional cat.S
Best tax levelDesulfovibrionales
Best eggNOG OGNA|NA|NA
Exons11
Model size1069
Cds size1068
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817005.3389835-CDS-L-elsbetiae_contig936:19699..197251622817005.3389835-CDS-L-elsbetiae_contig936:19699..19725Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 19700..19725 -
1691683976.8882914-CDS-L-elsbetiae_contig936:19699..197251691683976.8882914-CDS-L-elsbetiae_contig936:19699..19725Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 19700..19725 -
1622817005.3507502-CDS-L-elsbetiae_contig936:19944..199801622817005.3507502-CDS-L-elsbetiae_contig936:19944..19980Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 19945..19980 -
1691683976.8989139-CDS-L-elsbetiae_contig936:19944..199801691683976.8989139-CDS-L-elsbetiae_contig936:19944..19980Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 19945..19980 -
1622817005.3644013-CDS-L-elsbetiae_contig936:20454..205831622817005.3644013-CDS-L-elsbetiae_contig936:20454..20583Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 20455..20583 -
1691683976.908652-CDS-L-elsbetiae_contig936:20454..205831691683976.908652-CDS-L-elsbetiae_contig936:20454..20583Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 20455..20583 -
1622817005.3782005-CDS-L-elsbetiae_contig936:20715..207931622817005.3782005-CDS-L-elsbetiae_contig936:20715..20793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 20716..20793 -
1691683976.9212277-CDS-L-elsbetiae_contig936:20715..207931691683976.9212277-CDS-L-elsbetiae_contig936:20715..20793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 20716..20793 -
1622817005.3908026-CDS-L-elsbetiae_contig936:21018..210521622817005.3908026-CDS-L-elsbetiae_contig936:21018..21052Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 21019..21052 -
1691683976.929313-CDS-L-elsbetiae_contig936:21018..210521691683976.929313-CDS-L-elsbetiae_contig936:21018..21052Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 21019..21052 -
1622817005.4117148-CDS-L-elsbetiae_contig936:21309..214751622817005.4117148-CDS-L-elsbetiae_contig936:21309..21475Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 21310..21475 -
1691683976.9408257-CDS-L-elsbetiae_contig936:21309..214751691683976.9408257-CDS-L-elsbetiae_contig936:21309..21475Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 21310..21475 -
1622817005.4229615-CDS-L-elsbetiae_contig936:21756..218621622817005.4229615-CDS-L-elsbetiae_contig936:21756..21862Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 21757..21862 -
1691683976.9563665-CDS-L-elsbetiae_contig936:21756..218621691683976.9563665-CDS-L-elsbetiae_contig936:21756..21862Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 21757..21862 -
1622817005.4338288-CDS-L-elsbetiae_contig936:22201..222901622817005.4338288-CDS-L-elsbetiae_contig936:22201..22290Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 22202..22290 -
1691683976.9676304-CDS-L-elsbetiae_contig936:22201..222901691683976.9676304-CDS-L-elsbetiae_contig936:22201..22290Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 22202..22290 -
1622817005.4455366-CDS-L-elsbetiae_contig936:22646..227891622817005.4455366-CDS-L-elsbetiae_contig936:22646..22789Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 22647..22789 -
1691683976.9786005-CDS-L-elsbetiae_contig936:22646..227891691683976.9786005-CDS-L-elsbetiae_contig936:22646..22789Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 22647..22789 -
1622817005.458545-CDS-L-elsbetiae_contig936:23142..233041622817005.458545-CDS-L-elsbetiae_contig936:23142..23304Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 23143..23304 -
1691683976.99258-CDS-L-elsbetiae_contig936:23142..233041691683976.99258-CDS-L-elsbetiae_contig936:23142..23304Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 23143..23304 -
1622817005.4714625-CDS-L-elsbetiae_contig936:23585..236841622817005.4714625-CDS-L-elsbetiae_contig936:23585..23684Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 23586..23684 -
1691683977.0051007-CDS-L-elsbetiae_contig936:23585..236841691683977.0051007-CDS-L-elsbetiae_contig936:23585..23684Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig936 23586..23684 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig936.18355.1prot_L-elsbetiae_contig936.18355.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig936 19700..23684 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig936.18355.1

>prot_L-elsbetiae_contig936.18355.1 ID=prot_L-elsbetiae_contig936.18355.1|Name=mRNA_L-elsbetiae_contig936.18355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=356bp
MGQEQSSTGDDHTSNHARNSAPLSRRNLQSTVEVDVMFLYDEAALERGIA
STPEQMETLIADELPASNEAAENSLIDLRFNLVHAGPLPYTVETENHNSE
IFNLRINDAVKDLRDQYQADLVVMVGVFPDVCGSAYFNPSTEPSDEIFGY
GLVDIFCFDGRVTSHEIGHNMGASHDRVNSRFPTDYGHGLRYCADDGSER
FRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGTSEANNARV
LRENMVVVSNFRVGNSGLSCIPGVPGILDNDVCCPTSCGACGGTGCSGRD
GGDDFSGSEACCGGGVLALGRICSATVGAPCLVTDDPPAPTPAPVTDDQM
CTAGIP
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mRNA from alignment at L-elsbetiae_contig936:19700..23684-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig936.18355.1 ID=mRNA_L-elsbetiae_contig936.18355.1|Name=mRNA_L-elsbetiae_contig936.18355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3985bp|location=Sequence derived from alignment at L-elsbetiae_contig936:19700..23684- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCCAGGAACAGAGCTCCACGGGCGACGACCATACCAGCAACCACGC TAGGAATTCGGCCCCTTTGTCGCGCCGAAACTTGCAGTCTACCGTCGAGG TACGGAATGTTGTTGGCAAAATCACGTGTCTGCCTTGATTGGATGTTTTT CCCCTCTCAAACATGCCCAATACCCTTCCGAGTAGAGCCTGGTACGAACG CGCTAGCGGGCGGTGTACGTGCCAAGCTGCCTACTGACGCTTAAGAAGCC CGTCGCTCCTTCTGACTCTTCTACCAAAAAAGCGGATGGGTGCGAACAAC GTCAATCCCCCTGTCACGCGCTGTTTATGTACGCTGGTTCCTTGCCGTAC GCGGTATGGATGCCTTTAACACAACAACAGGTGGATGTCATGTTCCTGTA CGATGAAGCGGCTTTGGAAAGGGGCATTGCGTCCACGCCTGAGCAGATGG AGACCCTGATTGCCGACGAGCTGCCCGCGTCCAACGAGGCAGCCGAGAAC TCACTCATCGACCTCCGGTTCAATCTAGTACACGCTGGCCCGGCAAGTGA TGGTATCGCGGGCATTGAATTTTGGGAAGGAAATCACGAGTATACAATTT GTGTTCTGGTATGCCAGCGTGTGGTTTAAGCAGAACGCCCTAACGCTGAC GGTCGGGAGGTATTGTCCTTTTGGTTTTGAGGCCAAGACGAACTCGTCCC ACCGAGGGCTTGAGTGGTAGCCGTTTAAAGGTGATTGATTCACAGTGCAA CGGGTGCGTTGTAAAAAAGGATATCCGCCCCGCAGTGTTTGACTGGAAAA TTATGTCCGCGTGTCTTCGAGCTGATTATTTACTCTTTCCGTCTTCGATC CGGAACATTTGGCGCTCGTGTCTATTCCGTAATTACCTCCCACAGCTGCC GTACACCGTGGAGACTGAAAACCACAACTCCGAGATTTTCAACCTCAGAA TAAACGATGCCGTTAAGGATCTGAGGGATCAATACCAGGCGGACCTTGTC GTGATGGTGGGAGTCTTCCCTGATGTCTGCGGATCCGCGTGAGTGATTGC TTGCCATAAATACATGTCGCTACTATGGTGCACGACCAGGTCTCTCCCCC CTTAGAGCAGGCCTGCTATTTGGCCTTGTTGTGTGAGCAAAACAAAATGA GAATGCACCAGCAATGTACACGGGTATTCGAAGCAGCAGCAGGTGGCAAT ACTTACGTATGTGTGTGAAAAGCCTCCGCTATTTAGATGTGTCGATTTAA CAGCTTCGGAGGCCACGGGGGAACTCGGCTTTGACCACCACACGCAAACA CGCGAGGTCCAACTCGCTCTCATATACCCAGGGGTCACTAAAGCACGCGT ACTGTTCGCTTCATTGCCGCGGCCGTCTTCTTTCCCCTCTACAGGTATTT CAACCCCAGCACCGAACCCTCCGACGAAATATTCGGGTATGGTTTGGTCG ACATCTTCTGCTTCGACGGCAGAGTAACTTCACGTGCGTCCCTGTTGATA CCTTGGGGGCCCGGTGGCAATATACCATGTACACGGAGGGCCTGTCGCTC CGCGTGGGGGTGAATAAGAAGCGTGTGCCATAATCTGTGCCAAACTCCTC CCCTTTGGCAGACGAAATGTGAAGATGGGTAGATGGGTACTATTGTGTAC TTAGACCCACCAGTCAACAGATGTTGTTGCTAAAACGACCCAACCCGATC CGCACAAAGAGCGAGACCCTCCTATTGGTCTCACACACAGCTATACGAGT TATATGTACATATATGCGCGCTGAGCTCTCTGTCTTCTATCTTTCGTGGT CCCCCTGCGGCATGGTCTGCAGATGAGATCGGCCACAACATGGGAGCCAG CCACGACCGGGTCAACTCACGGTTCCCGACTGACTACGGGCACGGGCTGC GTTACTGCGCTGACGATGGCAGCGAAAGGTTTGTCAGACCAGACCTATAT CTAGTCCAGATGTAGCACGAGTGTGAATCGGACGGGTTTGGTCAAACTGC CAGCACAATGAGTTGTCACGCGAACGCACGGCTCAAAGATATTGTCGATC CCAACTCCTCCACACACACCGCCAGCAGGTCTTCCGAATAAGGTGCACGA ACGATTTTTACCCCCCTTTAAAAGCATACGAAACCCGTTCTTGTTGTTGG GCGTCGTTCTGAGTCCCGGAAGGCCTTTTTCTTATATCTCTTTGGTTGAG CGCGTGCAGGTTCAGAACCATCATGGCCTACAACTGCAGGCTTGAAACGC AACCAGACGAATCCAGCTTCTCGGCCGAAAGGGTAAACTACTTCAGCAAC CCAGACGTGGACTACCTCGGCTTGCCAACCGGCACCTCTGAAGCGAACAA CGCCAGAGTCCTCAGGGAGAACATGGTACGACCGCAGCAGAGCTCGCTCC TGTTGCGCTGCCCGATCTGTCGAGACAGAGACAGACGGTGTAATAGTATG TCGTCGCTGCTCTCTTGCTTTGATTGACTTAGTAATCAGCCGCCGCCCCT GAGCTTCAAGCCCATGGTATGAAGGAGTGTATGTTGTTTCGATGATGCCA CGTCGCCGACGCCCTCGACGTTTTCCCGGTCTCATGTCACGTCACAGTGA GCCACGATCCCTTTGCTCAAATCGTTTTGCAGGTGGTTGTTTCCAACTTC CGGGTCGGCAACAGTGGTGAGTTTTTTTGGGCTCTGTATCTACAGGCGAT CTGTATTTTTGTATTTTTGGCTGAAGAAAGCAACTGCTTACAACGGCGCG CACGCGATGCCGGGACATGTCTGCTTGACTGCGGCGACTGCTGTCAGTGA CGATATCCTCTCGCTAGGTGGAACTGATGACCTGTCGTCCACAACATAGC TAACCTCTGAAGCCACGCTCACCGCTTTCTCGCAAGACCAGGCCTATCCT GCATCCCCGGTGTCCCCGGCATTCTCGACAACGACGTTTGCTGCCCGACC AGCTGCGGAGCGTGCGGAGGTACGTGGATAGGTGTAGTTCAAGTAGATAC AATCAATCTTATAGGTCCGTCCCTGTTATCTTACTAATTTTCTCGCCGCT CTAGAAAGGCTCTTGGCTTCATTTCCTGTAACCCACAAATCTTGCTCTCA GGTACCGGTTGCAGCGGAAGAGATGGTGGTGATGACTTCAGCGGAAGCGA GGCTTGCTGCGGAGGAGGCGTCCTGGCATTGGGCCGCATCTGCTCTGCCA CCGTCGGAGCACCCTGCCTCGTCACGGACGGTAAGTTTCTTGATTTCGCG TGGAAGGAACAGCGTACGAATAAAAAGAAACACCTACGATTTTGGTCCAA TACTATACCCGCGGGGATGGAGACGTCGCCCGCGTTGTTTGCGACTGAAA AAGCAACCCCAAACTTTATTCATCGTCGAAATCCAACCTCATGCTTGTGA TGGTACCATATAGTTTACTTTTGATTTCCCCGATGGTCTCCTGTGGTGCG GCCAGGGTATAGATACGCCGAAGCAGGGGCACCCCCGTTTTTGTGACTGC CCGGTATTGGAGCCCAGGCCCAGTTGTACCTCGTACGCTCTTTGTAATAA ATAGCTTGTTCAAAACCCCAAAGGAAACACCCGACGGACGATGAGTCCCG GCAACATGTCAATTCCGCTCTACCGCTGCTGTTGTCTGTTCCCCGTTTTG ATCGGGTCTACCCTTGTATCGGTGTCGCAAACGCGGCTGCTGCCGGAAAA ACAGATCCGCCAGCGCCTACCCCTGCACCTGTCACGGACGGTAAGAAATT TGACACTTTGACCCCTTCGAGCTCTCCACAAGTTGACGTCAGGAATCGAA TCCTTTAAAGCGCATAGGTGAAAACTTCTGGGAGTAGCAAAGGCTCCCAA CGGCGTGAAGCAGAAGAACCTCCCCTCTGCGGCACGCGTTCTTCCACTTT CGGAGAGTAGCCGAATCTCTGACACCGCGATTTTTTCCTGATCTTGTTGA AATGAGCAGACCAAATGTGTACCGCTGGTATCCCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig936:19700..23684-

>mRNA_L-elsbetiae_contig936.18355.1 ID=mRNA_L-elsbetiae_contig936.18355.1|Name=mRNA_L-elsbetiae_contig936.18355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2136bp|location=Sequence derived from alignment at L-elsbetiae_contig936:19700..23684- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCCAGGAACAGAGCTCCACGGGCGACGACCATACCAGCAACCACGC
TAGGAATTCGGCCCCTTTGTCGCGCCGAAACTTGCAGTCTACCGTCGAGA
TGGGCCAGGAACAGAGCTCCACGGGCGACGACCATACCAGCAACCACGCT
AGGAATTCGGCCCCTTTGTCGCGCCGAAACTTGCAGTCTACCGTCGAGGT
GGATGTCATGTTCCTGTACGATGAAGCGGCTTTGGAAAGGGGCATTGCGT
CCACGCCTGAGCAGATGGAGACCCTGATTGCCGACGAGCTGCCCGCGTCC
AACGAGGCAGCCGAGAACTCACTCATCGACCTCCGGTTCAATCTAGTACA
CGCTGGCCCGGTGGATGTCATGTTCCTGTACGATGAAGCGGCTTTGGAAA
GGGGCATTGCGTCCACGCCTGAGCAGATGGAGACCCTGATTGCCGACGAG
CTGCCCGCGTCCAACGAGGCAGCCGAGAACTCACTCATCGACCTCCGGTT
CAATCTAGTACACGCTGGCCCGCTGCCGTACACCGTGGAGACTGAAAACC
ACAACTCCGAGATTTTCAACCTCAGAATAAACGATGCCGTTAAGGATCTG
AGGGATCAATACCAGGCGGACCTTGTCGTGATGGTGGGAGTCTTCCCTGA
TGTCTGCGGATCCGCCTGCCGTACACCGTGGAGACTGAAAACCACAACTC
CGAGATTTTCAACCTCAGAATAAACGATGCCGTTAAGGATCTGAGGGATC
AATACCAGGCGGACCTTGTCGTGATGGTGGGAGTCTTCCCTGATGTCTGC
GGATCCGCGTATTTCAACCCCAGCACCGAACCCTCCGACGAAATATTCGG
GTATGGTTTGGTCGACATCTTCTGCTTCGACGGCAGAGTAACTTCACGTA
TTTCAACCCCAGCACCGAACCCTCCGACGAAATATTCGGGTATGGTTTGG
TCGACATCTTCTGCTTCGACGGCAGAGTAACTTCACATGAGATCGGCCAC
AACATGGGAGCCAGCCACGACCGGGTCAACTCACGGTTCCCGACTGACTA
CGGGCACGGGCTGCGTTACTGCGCTGACGATGGCAGCGAAAGATGAGATC
GGCCACAACATGGGAGCCAGCCACGACCGGGTCAACTCACGGTTCCCGAC
TGACTACGGGCACGGGCTGCGTTACTGCGCTGACGATGGCAGCGAAAGGT
TCAGAACCATCATGGCCTACAACTGCAGGCTTGAAACGCAACCAGACGAA
TCCAGCTTCTCGGCCGAAAGGGTAAACTACTTCAGCAACCCAGACGTGGA
CTACCTCGGCTTGCCAACCGGCACCTCTGAAGCGAACAACGCCAGAGTCC
TCAGGGAGAACATGGTTCAGAACCATCATGGCCTACAACTGCAGGCTTGA
AACGCAACCAGACGAATCCAGCTTCTCGGCCGAAAGGGTAAACTACTTCA
GCAACCCAGACGTGGACTACCTCGGCTTGCCAACCGGCACCTCTGAAGCG
AACAACGCCAGAGTCCTCAGGGAGAACATGGTGGTTGTTTCCAACTTCCG
GGTCGGCAACAGTGGTGGTTGTTTCCAACTTCCGGGTCGGCAACAGTGGC
CTATCCTGCATCCCCGGTGTCCCCGGCATTCTCGACAACGACGTTTGCTG
CCCGACCAGCTGCGGAGCGTGCGGAGGCCTATCCTGCATCCCCGGTGTCC
CCGGCATTCTCGACAACGACGTTTGCTGCCCGACCAGCTGCGGAGCGTGC
GGAGGTACCGGTTGCAGCGGAAGAGATGGTGGTGATGACTTCAGCGGAAG
CGAGGCTTGCTGCGGAGGAGGCGTCCTGGCATTGGGCCGCATCTGCTCTG
CCACCGTCGGAGCACCCTGCCTCGTCACGGACGGTACCGGTTGCAGCGGA
AGAGATGGTGGTGATGACTTCAGCGGAAGCGAGGCTTGCTGCGGAGGAGG
CGTCCTGGCATTGGGCCGCATCTGCTCTGCCACCGTCGGAGCACCCTGCC
TCGTCACGGACGATCCGCCAGCGCCTACCCCTGCACCTGTCACGGACGAT
CCGCCAGCGCCTACCCCTGCACCTGTCACGGACGACCAAATGTGTACCGC
TGGTATCCCGACCAAATGTGTACCGCTGGTATCCCG
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