mRNA_L-elsbetiae_contig936.18355.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE) HSP 1 Score: 188 bits (477), Expect = 2.030e-49 Identity = 122/283 (43.11%), Postives = 155/283 (54.77%), Query Frame = 1 Query: 70 SRRNLQSTVEVDVMFLYD-EAALERGIASTPEQMETLIADELPASNEAAENSLI-DLRFNLVHAGPLPYTVETENH--------NSEIFNLRINDAVKDLRDQYQADLVVMVGVFPDVCGSAY-FNPSTEPSDEIFGYGLVDIFCFDGRVTSHEIGHNMGASHDRVNSRFPTDYGHGLRYCADDGSERFRTIMAY---NCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGTSEANNARVLRENMVVVSNFRVGNSGLSCIPGVPGILDNDVCCPTSCGACG 876 S R+LQ T +DV+ Y EAA GI+ Q+ T I + + N+A NS I DL + LVH LPY+ T + E+ L N AV DLR++YQ DLV +VG FP CG Y FN + E FG+ LV CFD +HEI HNMG HDR NS +Y HG RYC GS+ +RTIM+Y C + P E+ +VNYFSNP+V YL PTGT+ A+NAR + E+MV VSNFR + G +D D CC CG+ G Sbjct: 342 SDRSLQGTTVIDVLIFYSPEAASSEGISDA--QLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYSQMTYDPIDSDDIDLEPELDALAANSAVNDLRNEYQGDLVQLVGYFPGTCGLGYIFNGNAE-----FGFSLVGSNCFDNFSHTHEIAHNMGCYHDRDNSETQDEYRHGYRYCT--GSDPYRTIMSYYQNGCGGDPTP-EADPIVPQVNYFSNPEVTYLNKPTGTATADNARCIEESMVAVSNFRADGDFICSDDGDACAVDID-CCVGFCGSAG 613
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE) HSP 1 Score: 172 bits (437), Expect = 3.290e-44 Identity = 116/287 (40.42%), Postives = 153/287 (53.31%), Query Frame = 1 Query: 52 RNSAPLSRRNLQSTVEVDVMFLYD-EAALERGIASTPEQMETLIADELPASNEAAENS-LIDLRFNLVHAGPLPYTV------ETENHNSEIFNLRINDAVKDLRDQYQADLVVMVGVFPDVCGSAY-FNPSTEPSDEIFGYGLVDIFCFDGRVTSHEIGHNMGASHDRVNSRFPTDYGHGLRYCADDGSERFRTIMAY---NCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGTSEANNARVLRENMVVVSNFRVGNSGLSCIPGVPGILDNDVCCPTSCGACG 876 R+ S R LQ T +DV+ +Y EAA RGIA Q+ T I + + N+A NS + L + LV LPY+ + + E+ L N V DLR+QYQ DLV +VG FP CG Y FN D FG+ LVD CFD +HEI HNMG HD+ NS Y HG RYC +G++ +RTIM+Y C + ++ RVNYFSNP+V YL TGT+ A+NAR + ++MV VS FR + G +D+D CC CG+ G Sbjct: 158 RSQGMSSDRRLQGTTVIDVLIVYSPEAAYARGIAEA--QLLTRIVEGMVTLNQAITNSGIAGLEYRLVQVAELPYSQMAYIPSDDIDLKPELDALAANSNVTDLRNQYQGDLVQLVGYFPGTCGLGYIFN-----GDAAFGFSLVDSNCFDNFSHTHEIAHNMGCYHDKNNSDTQHAYRHGWRYC--EGADPYRTIMSYYHNGCGGDPTSEDDPI-VPRVNYFSNPNVTYLNKSTGTAAADNARCIEDSMVAVSEFRDDGDFVCSDDGDTCTVDSD-CCVGFCGSAG 433
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: UPI00198C5885 (Uncharacterized protein n=1 Tax=Herminiimonas sp. TaxID=1926289 RepID=UPI00198C5885) HSP 1 Score: 124 bits (311), Expect = 1.880e-28 Identity = 83/237 (35.02%), Postives = 122/237 (51.48%), Query Frame = 1 Query: 82 LQSTVEVDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLIDLRFNLVHAGPLPYTVETENHNSEIFNLRINDAVKDLRDQYQADLVVMVGVFPDVCGSAYFNPSTEPSDEIFGYGLVDIFCFDGRVT-SHEIGHNMGASHDRVNSRFPTDYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGT-SEANNARVLRENMVVVSNFR 786 + V +DVM Y A + +A + +A+ +N+A NS + ++ NLV P+PY+ +++N+ + +L VK R+ AD+VVM+ CG AY PS + F G+V+ C G + HEIGH G HD V S T Y +G Y + + + +RTIMAYNC S R+ YFSNP+++Y GL GT + ++NARVL E VS FR Sbjct: 197 VDGKVVIDVMVAYP-ATVTAAVADVTGLITLAVAE----TNQAYINSGVKIQMNLVGTMPIPYSETGKDYNTMLNDLNAMPDVKLQRNNLGADIVVMLSTNSSYCGMAYMGPSAD-----FAAGVVNYSCATGYYSFGHEIGHMQGLQHDPVTSPGTTPYAYGHGYQSTNSAPSWRTIMAYNC---------SPGCSRLQYFSNPNLNYNGLAMGTPTVSDNARVLNETAASVSLFR 414
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A0F2IZ28_9BACT (Peptidyl-Asp metalloendopeptidase n=1 Tax=Candidatus Magnetoovum chiemensis TaxID=1609970 RepID=A0A0F2IZ28_9BACT) HSP 1 Score: 122 bits (307), Expect = 1.660e-27 Identity = 85/252 (33.73%), Postives = 129/252 (51.19%), Query Frame = 1 Query: 67 LSRRNLQSTVEVDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLIDLRFNLVHAGPLPYTVETENHNSEIFNLRIN-----DAVKDLRDQYQADLVVM-VGVFPDVCGSAYFNPSTEPSDEIFGYGLVDIFCFDGRVT-SHEIGHNMGASHDRVNSRFPTDYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGTS-----EANNARVLRENMVVVSNFR 786 L + T +DV+ +Y AA + A + +E+LI +NE+ NS ID+ N+VH YT ET + ++E+ LR D++ LRD Y ADLV + V + CG Y + S + + +V C G T +HE+GHNMGA HDR + Y + Y + ++++RTIMAYN + ++ ++ R+NY+SNPDV Y G+PTG S ANNA L ++ F+ Sbjct: 217 LDKNKRSGTTTIDVLVVYTSAA--KTAAGSQSAIESLITLAETEANESFTNSGIDIELNVVHTAQTNYT-ET-SMSTELSALRNTNDGKMDSIHTLRDDYGADLVQLWVSNGTNYCGLGYLMTNVSSSFASYAFSVVRYDCATGTYTFAHELGHNMGAEHDRYVATTEGAYSYSYGYV--NTTDKWRTIMAYNDKCS----DNGYNCTRINYWSNPDVSYDGVPTGKSASASNSANNALTLTNTAATIAAFK 458
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: D8LMP2_ECTSI (Peptidyl-Asp metallopeptidase. metallo peptidase. MEROPS family M72 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP2_ECTSI) HSP 1 Score: 115 bits (289), Expect = 1.820e-27 Identity = 72/170 (42.35%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 97 EVDVMFLYD-EAALERGIASTPEQMETLIADELPASNEAAENSLI-DLRFNLVHAGPLPYTVETENHNS------EIFNLRINDAVKDLRDQYQADLVVMVGVFPDVCGSAY-FNPSTEPSDEIFGYGLVDIFCFDGRVTSHEIGHNMGASHDRVNSRFPTDYGHGLRYC 579 ++DV+ Y EAA GI+ Q+ T I + + N+A NS I DL + LVH LPY+ T + N E+ L + V DLRDQYQ DLV +VG FP CG Y FN + E +G+ LV CFD +HEI HNMG HDR+NS + HG RYC Sbjct: 12 KIDVLIFYSPEAASSEGISDA--QLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYSQMTYDPNDDIDLGPELDALAADSDVDDLRDQYQGDLVQLVGYFPGTCGLGYVFNGNAE-----YGFSLVGSNCFDNFSHTHEIAHNMGCYHDRLNSGPQDAFRHGYRYC 174
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A532EBT1_9BACT (Uncharacterized protein n=2 Tax=unclassified Nitrospira TaxID=2652172 RepID=A0A532EBT1_9BACT) HSP 1 Score: 119 bits (298), Expect = 2.150e-26 Identity = 90/259 (34.75%), Postives = 128/259 (49.42%), Query Frame = 1 Query: 100 VDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLIDLRFNLVHAGPLPYTVETENHNSEIFNLR-INDAVKD----LRDQYQADLVVMV-GVFPDVCGSAYFNPSTEPSDEIFGYGLVDIFCFDGRVTSHEIGHNMGASHDRVNS---RFPTDYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGL-PTG-------TSEANNARVLRENMVVVSNFRVGNSGLSCIPGVP 825 +DV+ +Y A + +E LIA + +N A NS I+ +F LVH Y ET N+N+++ +LR ND D LR+ ++ADLV ++ D CG AY S + + +V+ C G +HE+GHNMG+ HDRV +P +GH + +FRTIMAY C S S R+N+FSNP+V Y G TG + A+NAR + V+NFR NSG + P P Sbjct: 222 IDVLAVYTTTA--KNANGGQNGIEALIALGISLANTAFTNSQINTQFRLVHTAEADYA-ETGNYNTDLSHLRSTNDGFMDEVHALRNAHKADLVTLIEDNIGDACGVAYVMSSVSANFANSAFSVVEDDCISGYTLAHELGHNMGSMHDRVEGGTGAYPYSFGH-------KEAGKFRTIMAYPC---------SPSCPRINHFSNPNVSYQGTWQTGIDHNTSPATSADNARAFTNALSTVANFR--NSGDTTAPPAP 459
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A1Q8QFJ7_9DELT (Uncharacterized protein n=1 Tax=Desulfovibrio sp. DV TaxID=1844708 RepID=A0A1Q8QFJ7_9DELT) HSP 1 Score: 119 bits (297), Expect = 2.410e-26 Identity = 84/242 (34.71%), Postives = 116/242 (47.93%), Query Frame = 1 Query: 100 VDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLIDLRFNLVHAGPLPYTVET--ENHNSEIFNLR-----INDAVKDLRDQYQADLVVMVGVFPDVCGSAYFNPSTEPSDEIFGYGLVDIFCFDGRVT-SHEIGHNMGASHDRVNSRFPTDYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGT-----SEANNARVLRENMVVVSNFR 786 +DVM LY +A R A M+ LIA +N+ S + RF LVHA + Y +T N+ + +L+ + D + LRDQY AD+V ++ CG Y ST + +VD C G + +HE GHN GA HDR ++ Y + Y S FRTIMAY+C S RVNY+SNPDV+Y G PTG + A+N R L + +N+R Sbjct: 196 IDVMVLYTPSA--RAAAGGGPAMQALIALAFSETNQGYAQSGVIQRFRLVHAQEVAYVEDTGSSGFNTALDSLQNPSDGVMDEIHALRDQYGADIVSLLINNGWYCGLGYLMTSTNWDFAANAFNVVDYSCATGYYSFAHECGHNQGAHHDRGSASGSILYSYAYGYQQTAASPAFRTIMAYDC---------SAGCTRVNYWSNPDVNYNGFPTGVLYSAGNAADNRRTLNNTRTIAANWR 426
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A839HE77_9GAMM (Fibronectin type III domain-containing protein n=1 Tax=Thiospirillum jenense TaxID=1653858 RepID=A0A839HE77_9GAMM) HSP 1 Score: 115 bits (287), Expect = 1.940e-24 Identity = 79/239 (33.05%), Postives = 117/239 (48.95%), Query Frame = 1 Query: 100 VDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLIDLRFNLVHAGPLPYTVETENHNSEIFNLR-----INDAVKDLRDQYQADLVVMVGVFPDVCGSAYFNPSTEPSDEI--FGYGLVDIFCFDGRVTSHEIGHNMGASH--DRVNSRFPTDYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGTSEANNARVLRENMVVVSNFRV 789 +D+M +Y A+ + T + +++ I + A+N A +NS I++ N V+ G + YT E + + L+ I D + LRDQY ADLVV+V D CG Y S+ S + + +V+ C +HEIGH G H + S Y +G R C FR IM+Y+C RV +FSNP+V Y GL TG+S AN A+ + +V+NFRV Sbjct: 280 IDLMVVYSPQAVSK--MGTEDALKSTITAAIAAANTAYDNSQINVALNPVYYGQVNYT-EPATMPTALTQLQSKTDGIIDDIHALRDQYSADLVVLVDTNTDYCGYGYIMNSSYTSSAFAPYAFAVVNYSCLSLNSLAHEIGHLQGNQHNTESTTSTGAYSYSYGYRVCGI-----FRDIMSYDCPTPNT------GTPRVLHFSNPNVTYQGLATGSSTANAAQTINNTAAIVANFRV 504
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A2G2A1R6_9BACT (Ig-like domain-containing protein n=1 Tax=Phycisphaera sp. TaxID=2030824 RepID=A0A2G2A1R6_9BACT) HSP 1 Score: 112 bits (280), Expect = 1.530e-23 Identity = 93/262 (35.50%), Postives = 129/262 (49.24%), Query Frame = 1 Query: 100 VDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLID-LRFNLVHAGPLPYTVETENHNSEIFNLR-----INDAVKDLRDQYQADLVVMVGVFPDVCGSAYFNPSTEPSDEIFGYGLVDIFCFDGRVT-SHEIGHNMGASHDRVNSRFPT-DYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGT-SEANNARVLRENMVVVSNFRVGNSGLSCIP-GVPGILDNDVCCP 855 +DVM +Y A G T + L + + +N NS I L NLVH + YT E+ + ++I LR D V LRD + ADLV M+ + CG Y P D FG+ + D C G +T +HEIGHNMGA+HDR N+ Y +G R+ + +G +R++MAY+ RV YFSNPD++Y+G PTG + +NAR V+NFR N CI G+ G D+ CP Sbjct: 215 IDVMIVYTAEA-RSGWGGTSAIL-ALAQNSINTTNLGYSNSDIGPLVLNLVHTEEVVYT-ESGSAGTDITRLRGTNDGFMDNVHSLRDTHAADLVAMLVNSFNACGVGYL----APFDAAFGFTVTDTGCAVGNLTFAHEIGHNMGATHDRNNAGGAVFSYAYGWRWNSTNGV-LYRSVMAYS------------PGSRVPYFSNPDINYIGTPTGVVNSEDNARCHDNTRDSVANFRDSNG---CITFGISGQPDSQTACP 453
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Match: A0A1I1GBE4_9GAMM (Pre-peptidase C-terminal domain-containing protein n=1 Tax=Pseudoalteromonas denitrificans DSM 6059 TaxID=1123010 RepID=A0A1I1GBE4_9GAMM) HSP 1 Score: 111 bits (277), Expect = 3.270e-23 Identity = 83/244 (34.02%), Postives = 121/244 (49.59%), Query Frame = 1 Query: 88 STVEVDVMFLYDEAALERGIASTPEQMETLIADELPASNEAAENSLIDLRFNLVHAGPLPYTVETENHNSEIFNLRIN-----DAVKDLRDQYQADLVVMVGVFPDVCGSAYFNPSTEPSDEIFGYGLVDIFCFDGRVT-SHEIGHNMGASHDRVN--SRFPTDYGHGLRYCADDGSERFRTIMAYNCRLETQPDESSFSAERVNYFSNPDVDYLGLPTGT-SEANNARVLRENMVVVSNFRVG 792 ++ ++ ++ +Y AA S + +LI + +N NS I+ + ++VH + YT E N ++++ L D V LRDQY AD+VV+V CG A + S + +VD C G + HEIGH GA H+ N + P DYGHG + D R+RT+MAYNC + R+NY+SNPD Y G GT S++NNARVL ++NFR G Sbjct: 170 ASADIKLLVVYTAAA-----KSKVADINSLIDLAVVETNTGYANSAINAQVSVVHKAQVTYT-EASNSSTDLTRLAATNDGYMDEVHTLRDQYGADVVVLVNDVNGYCGQADAIGANASS----AFVIVDYDCATGYYSFGHEIGHLQGARHNPENDPTTTPYDYGHGYQ----DPQSRWRTVMAYNC---------TSGCTRINYWSNPDKSYAGDVMGTNSDSNNARVLNLTSNAMANFRSG 390 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig936.18355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig936.18355.1 >prot_L-elsbetiae_contig936.18355.1 ID=prot_L-elsbetiae_contig936.18355.1|Name=mRNA_L-elsbetiae_contig936.18355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=356bp MGQEQSSTGDDHTSNHARNSAPLSRRNLQSTVEVDVMFLYDEAALERGIAback to top mRNA from alignment at L-elsbetiae_contig936:19700..23684- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig936.18355.1 ID=mRNA_L-elsbetiae_contig936.18355.1|Name=mRNA_L-elsbetiae_contig936.18355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3985bp|location=Sequence derived from alignment at L-elsbetiae_contig936:19700..23684- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig936:19700..23684- >mRNA_L-elsbetiae_contig936.18355.1 ID=mRNA_L-elsbetiae_contig936.18355.1|Name=mRNA_L-elsbetiae_contig936.18355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2136bp|location=Sequence derived from alignment at L-elsbetiae_contig936:19700..23684- (Laminarionema elsbetiae ELsaHSoW15)back to top |