mRNA_L-elsbetiae_contig935.18349.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig935.18349.1 vs. uniprot
Match: A0A6H5KLX0_9PHAE (Glutaredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX0_9PHAE) HSP 1 Score: 286 bits (733), Expect = 8.790e-97 Identity = 150/180 (83.33%), Postives = 167/180 (92.78%), Query Frame = 1 Query: 1 MKFSMNIVVLAMALLVGSASSFVLSRAATASARLSSRTSAAAACSRTSLRASMDGENLLPNAAEVMDEMAGEAKGVIEGLVKENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLTNPAVREAVKDFSSWPTIPQLYVNGEFTGGADIMIESFQSGELKKTLEDAGCTFVPTE 540 M F++N+VVLA ALL GSASSFVL+ TA + L+S +++A+CS+TSLRASMDGENLLPNAAE+MDEMAGEAK VIE LVKENKVMLFMKGNKMFPQCGFSNSA+QVLRACDVEFETYDVLTNP VREAVK++SSWPTIPQLYV+GEFTGGADIMIESFQSGELKKTLEDAGCTFVP+E Sbjct: 1 MNFAVNLVVLAFALLAGSASSFVLTPK-TAPSSLASSPTSSASCSKTSLRASMDGENLLPNAAEIMDEMAGEAKDVIERLVKENKVMLFMKGNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKTLEDAGCTFVPSE 179
BLAST of mRNA_L-elsbetiae_contig935.18349.1 vs. uniprot
Match: D7G8D5_ECTSI (Grx_S14-glutaredoxin subgroup II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D5_ECTSI) HSP 1 Score: 180 bits (457), Expect = 7.980e-56 Identity = 83/89 (93.26%), Postives = 88/89 (98.88%), Query Frame = 1 Query: 274 GNKMFPQCGFSNSAIQVLRACDVEFETYDVLTNPAVREAVKDFSSWPTIPQLYVNGEFTGGADIMIESFQSGELKKTLEDAGCTFVPTE 540 GNKMFPQCGFSNSA+QVLRACDVEFETYDVLTNP VREAVK+FSSWPTIPQLY++GEFTGGADIMIESFQSGELKKTLEDAGCTFVP+E Sbjct: 17 GNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEFSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGCTFVPSE 105
BLAST of mRNA_L-elsbetiae_contig935.18349.1 vs. uniprot
Match: A0A835Z4Q0_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q0_9STRA) HSP 1 Score: 180 bits (457), Expect = 5.770e-55 Identity = 84/132 (63.64%), Postives = 109/132 (82.58%), Query Frame = 1 Query: 136 RTSLRASMDGENLLPNAAEVMDEMAGEAKGVIEGLVKENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLTNPAVREAVKDFSSWPTIPQLYVNGEFTGGADIMIESFQSGELKKTLEDAGCTFV 531 R+ L+++ DG+NL P+ AE ++ A EA+ I+ +VKENKVMLFMKGNKMFPQCGFSN+A+QVLRA DV+FET+DVL++P +R+ +K++S WPTIPQLYV GEF GG+DI+IE FQ+GELK TLE G FV Sbjct: 35 RSVLQSTSDGQNLRPDVAEQLELYAAEAQKRIDSMVKENKVMLFMKGNKMFPQCGFSNTAVQVLRASDVKFETFDVLSDPDIRQGIKEYSQWPTIPQLYVGGEFVGGSDILIELFQNGELKTTLESGGAEFV 166
BLAST of mRNA_L-elsbetiae_contig935.18349.1 vs. uniprot
Match: A0A6V1R5C5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R5C5_HETAK) HSP 1 Score: 156 bits (395), Expect = 1.170e-45 Identity = 70/116 (60.34%), Postives = 95/116 (81.90%), Query Frame = 1 Query: 166 ENLLPNAAEVMDEMAGEAKGVIEGLVKENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLTNPAVREAVKDFSSWPTIPQLYVNGEFTGGADIMIESFQSGELKKTLED 513 +N + A M+++ +AKG IE +V +NKVMLFMKG K+FPQCGFSN+A+Q+LR+ DVEF+T+DVL++P +R+ +KDFS+WPTIPQLYV+ EF GG DIMIE F++GELKK E+ Sbjct: 45 DNADSSIAAEMEKIQAQAKGRIENMVNDNKVMLFMKGTKIFPQCGFSNTAVQILRSLDVEFQTFDVLSDPDIRQGIKDFSNWPTIPQLYVDKEFVGGCDIMIELFENGELKKMFEE 160
BLAST of mRNA_L-elsbetiae_contig935.18349.1 vs. uniprot
Match: A0A4D9CRD6_9STRA (Glutaredoxin n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRD6_9STRA) HSP 1 Score: 148 bits (373), Expect = 6.120e-43 Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 1 Query: 199 DEMAGEAKGV--IEGLVKENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLTNPAVREAVKDFSSWPTIPQLYVNGEFTGGADIMIESFQSGELKKTLED 513 DE A + + I+ LV NKVMLFMKG+K+FPQCGFSN+A+ +LRACD EFET+DVL++ VRE +K++SSWPTIPQ YVNGEF GG+DI++E F+SGEL+KTL + Sbjct: 5 DEAAERSAAIETIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTLAE 111
BLAST of mRNA_L-elsbetiae_contig935.18349.1 vs. uniprot
Match: W7TU87_9STRA (Glutaredoxin-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TU87_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.530e-42 Identity = 69/107 (64.49%), Postives = 88/107 (82.24%), Query Frame = 1 Query: 199 DEMAGEAKGV--IEGLVKENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLTNPAVREAVKDFSSWPTIPQLYVNGEFTGGADIMIESFQSGELKKTLED 513 DE A + V I+ LV NKVMLFMKG+K+FPQCGFSN+A+ +LRACD EFET+DVL++ VRE +K++SSWPTIPQ YVNGEF GG+DI++E F+SGEL+KTL + Sbjct: 46 DEAAERSAAVEKIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTLAE 152
BLAST of mRNA_L-elsbetiae_contig935.18349.1 vs. uniprot
Match: UPI0019DB23B3 (Grx4 family monothiol glutaredoxin n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI0019DB23B3) HSP 1 Score: 144 bits (363), Expect = 1.620e-41 Identity = 62/104 (59.62%), Postives = 85/104 (81.73%), Query Frame = 1 Query: 205 MAGEAKGVIEGLVKENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLTNPAVREAVKDFSSWPTIPQLYVNGEFTGGADIMIESFQSGELKKTLEDA 516 M E K I+ LVK+NK+M+FMKGNK+ PQCGFSN+ +Q++ V FET+DVL +P VR+ +KD+S+WPTIPQ+Y+NGEF GG+DI+IE +QSGEL++T+E A Sbjct: 1 MTSEVKARIDQLVKDNKIMVFMKGNKLMPQCGFSNNVVQIMNVLGVPFETFDVLADPDVRQGIKDYSNWPTIPQVYLNGEFLGGSDILIEMYQSGELQQTVEVA 104
BLAST of mRNA_L-elsbetiae_contig935.18349.1 vs. uniprot
Match: A0A7S2V131_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V131_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.410e-41 Identity = 63/104 (60.58%), Postives = 85/104 (81.73%), Query Frame = 1 Query: 196 MDEMAGEAKGVIEGLVKENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLTNPAVREAVKDFSSWPTIPQLYVNGEFTGGADIMIESFQSGELKKTL 507 M+ + A+ I+ +V +N +MLFMKG ++FPQCGFSN+A+Q+LRACDVEFET+DVL +P +R+ +KDFS WPTIPQLYVNGEF GG DIM E +Q+GE+K+ + Sbjct: 47 MESESVGAQDRIKDMVSKNSIMLFMKGTRIFPQCGFSNTAVQILRACDVEFETFDVLEDPDIRQGIKDFSQWPTIPQLYVNGEFIGGCDIMTELYQNGEIKEIV 150
BLAST of mRNA_L-elsbetiae_contig935.18349.1 vs. uniprot
Match: A0A4P7WC17_9PROT (Glutaredoxin n=1 Tax=Acetobacteraceae bacterium TaxID=1909293 RepID=A0A4P7WC17_9PROT) HSP 1 Score: 141 bits (356), Expect = 2.250e-40 Identity = 65/112 (58.04%), Postives = 85/112 (75.89%), Query Frame = 1 Query: 205 MAGEAKGVIEGLVKENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLTNPAVREAVKDFSSWPTIPQLYVNGEFTGGADIMIESFQSGELKKTLEDAGCTFVPTE 540 M+ A VIE L+ EN VMLFMKG+K FPQCGFS+ +Q+L VEFET++VL + A+R+ +KDF++WPTIPQLYV GEF GG DI+IE +Q+GELK LE+ G + P+E Sbjct: 1 MSNVAFPVIEKLISENPVMLFMKGSKNFPQCGFSSKVVQILLRLGVEFETFNVLEDDAIRQGIKDFTNWPTIPQLYVKGEFVGGCDILIEMYQNGELKTLLEEKGISLNPSE 112
BLAST of mRNA_L-elsbetiae_contig935.18349.1 vs. uniprot
Match: A0A7S0EUU3_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EUU3_9EUKA) HSP 1 Score: 142 bits (358), Expect = 2.480e-40 Identity = 65/99 (65.66%), Postives = 79/99 (79.80%), Query Frame = 1 Query: 229 IEGLVKENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLTNPAVREAVKDFSSWPTIPQLYVNGEFTGGADIMIESFQSGELKKTLEDAGCT 525 IE L+ E+KVMLFMKGNKMFPQCGFSN+ +Q+L AC+ FET+DVL + VRE +K FSSWPTIPQ+YV GEF GG D+MIE +QSGEL + LE A + Sbjct: 41 IEELIGEHKVMLFMKGNKMFPQCGFSNTVVQILNACETPFETFDVLGDQRVREDIKRFSSWPTIPQVYVEGEFLGGCDVMIEMYQSGELAEILEKANAS 139 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig935.18349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig935.18349.1 >prot_L-elsbetiae_contig935.18349.1 ID=prot_L-elsbetiae_contig935.18349.1|Name=mRNA_L-elsbetiae_contig935.18349.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp MKFSMNIVVLAMALLVGSASSFVLSRAATASARLSSRTSAAAACSRTSLRback to top mRNA from alignment at L-elsbetiae_contig935:19781..24580+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig935.18349.1 ID=mRNA_L-elsbetiae_contig935.18349.1|Name=mRNA_L-elsbetiae_contig935.18349.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4800bp|location=Sequence derived from alignment at L-elsbetiae_contig935:19781..24580+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig935:19781..24580+ >mRNA_L-elsbetiae_contig935.18349.1 ID=mRNA_L-elsbetiae_contig935.18349.1|Name=mRNA_L-elsbetiae_contig935.18349.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1086bp|location=Sequence derived from alignment at L-elsbetiae_contig935:19781..24580+ (Laminarionema elsbetiae ELsaHSoW15)back to top |