mRNA_L-elsbetiae_contig9343.18344.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9343.18344.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 327 bits (838), Expect = 5.770e-104 Identity = 158/204 (77.45%), Postives = 176/204 (86.27%), Query Frame = 1 Query: 1 VKSILREFGLDPSNLASGTTDSGSDIKALCINGLLPKFGTKWGWCFCHLMVKAAEQGFGVSLDPATSKNPEARDMLKHVIKVVETLNKSPNLRKKFEDLQVDMLGEVFKIVKHAPQRWLSLTRTVERIIRLWHVLRKLYSDEGKDFPLEQGDNKRGILQLYSLLQPLSSITRDGQYGGAPMTADIFMKFGLLKMDVLDMSKPLK 612 +KS+L EFGL PS+LASGTTDSGSD+KA+ N L P + W WCFCHLMVKAAEQ +G+ LDPA SKNP+ARD+LK V+KVVE LNKSPN + KFEDLQVDMLGE+FK+VKHAPQRWLSLTRTVER IRLWHVLRKLYSDEG++FPLE+GD K ILQLYSLLQPLSSITRDGQYG APM ADIFMKFG+L DVLD SK LK Sbjct: 317 MKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDLK 520
BLAST of mRNA_L-elsbetiae_contig9343.18344.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE) HSP 1 Score: 315 bits (806), Expect = 3.310e-103 Identity = 150/203 (73.89%), Postives = 172/203 (84.73%), Query Frame = 1 Query: 4 KSILREFGLDPSNLASGTTDSGSDIKALCINGLLPKFGTKWGWCFCHLMVKAAEQGFGVSLDPATSKNPEARDMLKHVIKVVETLNKSPNLRKKFEDLQVDMLGEVFKIVKHAPQRWLSLTRTVERIIRLWHVLRKLYSDEGKDFPLEQGDNKRGILQLYSLLQPLSSITRDGQYGGAPMTADIFMKFGLLKMDVLDMSKPLK 612 KSILREFGL PS+LASGTTDSGSD+K+ +NGL P++G W WCFCHLMVKAAE GFG +DP SKNPEARDMLK+VI +V TLN+S N + KFEDLQVD+LG+V KI APQRWL+ RT+ER+IRLWHVLRKLYSD GK+FPLE+GDNK ILQL+SLLQ LSS+TRDGQYG APM AD+FMKFG LKM+VLD SKPLK Sbjct: 34 KSILREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQYGNAPMQADVFMKFGELKMEVLDPSKPLK 236
BLAST of mRNA_L-elsbetiae_contig9343.18344.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE) HSP 1 Score: 298 bits (763), Expect = 1.100e-98 Identity = 145/204 (71.08%), Postives = 168/204 (82.35%), Query Frame = 1 Query: 1 VKSILREFGLDPSNLASGTTDSGSDIKALCINGLLPKFGTKWGWCFCHLMVKAAEQGFGVSLDPATSKNPEARDMLKHVIKVVETLNKSPNLRKKFEDLQVDMLGEVFKIVKHAPQRWLSLTRTVERIIRLWHVLRKLYSDEGKDFPLEQGDNKRGILQLYSLLQPLSSITRDGQYGGAPMTADIFMKFGLLKMDVLDMSKPLK 612 VK+IL EFGL S+LASGT DSGSD+K++ NGL P+FG W WCFCHLMVKAAE GFG +DP SKNPEARDMLK +I +V TL++S N + KF+DLQVD+LGEV KI AP+RWL+L RT+ER+IRLWHVLRKLYSD GK FPLE+GDNK ILQLYSLLQP SS+TRDGQYGGAPM ADI+MK G+LKM VLD S+ LK Sbjct: 84 VKAILHEFGLRTSDLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLYSDTGKTFPLEEGDNKDCILQLYSLLQPPSSVTRDGQYGGAPMLADIYMKCGMLKMRVLDPSEELK 287
BLAST of mRNA_L-elsbetiae_contig9343.18344.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 290 bits (742), Expect = 1.050e-93 Identity = 141/204 (69.12%), Postives = 168/204 (82.35%), Query Frame = 1 Query: 1 VKSILREFGLDPSNLASGTTDSGSDIKALCINGLLPKFGTKWGWCFCHLMVKAAEQGFGVSLDPATSKNPEARDMLKHVIKVVETLNKSPNLRKKFEDLQVDMLGEVFKIVKHAPQRWLSLTRTVERIIRLWHVLRKLYSDEGKDFPLEQGDNKRGILQLYSLLQPLSSITRDGQYGGAPMTADIFMKFGLLKMDVLDMSKPLK 612 +++IL EFGL PS+LASGTTDSGSD+K++ +NGL PK+G W WC+CHLMVKAAE FG DP SKNPEAR+MLK++I ++ TL+KS NL KFEDLQVD+LGEV I APQRWL+L RT+ER+IRLW V+RKLYSD GK+FPLE+GDNK I QLYSLLQPLSS+TRDGQYGG PM ADI+MKFG+LKM VL+ S LK Sbjct: 65 LEAILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKS-NLTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLK 267
BLAST of mRNA_L-elsbetiae_contig9343.18344.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE) HSP 1 Score: 288 bits (737), Expect = 1.560e-93 Identity = 137/193 (70.98%), Postives = 160/193 (82.90%), Query Frame = 1 Query: 1 VKSILREFGLDPSNLASGTTDSGSDIKALCINGLLPKFGTKWGWCFCHLMVKAAEQGFGVSLDPATSKNPEARDMLKHVIKVVETLNKSPNLRKKFEDLQVDMLGEVFKIVKHAPQRWLSLTRTVERIIRLWHVLRKLYSDEGKDFPLEQGDNKRGILQLYSLLQPLSSITRDGQYGGAPMTADIFMKFGLLK 579 ++S+L EFGL S+LASGTTDSGSD+K++ +NGL PK+G W WC CHLMVKAAE FG DP SKNPE R MLK+VI +V TL+KSPNL KFED+QVD+LGE+ KI APQRWL+L RT+ER+IRLWHVLRKL+SD GK FPLE+GDNK ILQLYSLLQPLSS+TRDGQYGG PM ADI+MKFG+LK Sbjct: 230 LESVLHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKMLKNVIGMVGTLHKSPNLTAKFEDVQVDLLGEILKIPNQAPQRWLTLVRTLERVIRLWHVLRKLHSDAGKTFPLEEGDNKDCILQLYSLLQPLSSVTRDGQYGGVPMMADIYMKFGMLK 422
BLAST of mRNA_L-elsbetiae_contig9343.18344.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 286 bits (733), Expect = 1.010e-90 Identity = 139/204 (68.14%), Postives = 166/204 (81.37%), Query Frame = 1 Query: 1 VKSILREFGLDPSNLASGTTDSGSDIKALCINGLLPKFGTKWGWCFCHLMVKAAEQGFGVSLDPATSKNPEARDMLKHVIKVVETLNKSPNLRKKFEDLQVDMLGEVFKIVKHAPQRWLSLTRTVERIIRLWHVLRKLYSDEGKDFPLEQGDNKRGILQLYSLLQPLSSITRDGQYGGAPMTADIFMKFGLLKMDVLDMSKPLK 612 +++IL EFG PS+LASGTTDSGSD+K++ +NGL PK+G W WC+CHLM+KAAE FG DP SKNPEA +MLK++I +V TL+KS NL KFEDLQVD+LGEV KI APQRWL+L RT+ER+IRLWHVLRKLYSD GK+F LE+GDNK I QLYSLLQ LSS+TRDGQYGG PM ADI++KFG+LKM VL+ S LK Sbjct: 73 LEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADLK 276
BLAST of mRNA_L-elsbetiae_contig9343.18344.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 260 bits (664), Expect = 4.820e-80 Identity = 126/183 (68.85%), Postives = 149/183 (81.42%), Query Frame = 1 Query: 64 SGSDIKALCINGLLPKFGTKWGWCFCHLMVKAAEQGFGVSLDPATSKNPEARDMLKHVIKVVETLNKSPNLRKKFEDLQVDMLGEVFKIVKHAPQRWLSLTRTVERIIRLWHVLRKLYSDEGKDFPLEQGDNKRGILQLYSLLQPLSSITRDGQYGGAPMTADIFMKFGLLKMDVLDMSKPLK 612 SGSD+K++ +NGL PK+G W WC+CHLMVKAAE FG DP SKNPEAR+MLK++I ++ TL+KS NL KFEDLQVD+LGEV I APQRWL+L RT+ER+IRLW V+RKLYSD GK+FPLE+GDNK I QLYSLLQPLSS+TRDGQYGG PM ADI+MKFG+LKM VL+ S LK Sbjct: 215 SGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKS-NLTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLK 396
BLAST of mRNA_L-elsbetiae_contig9343.18344.1 vs. uniprot
Match: A0A6H5JTT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT2_9PHAE) HSP 1 Score: 251 bits (642), Expect = 5.350e-80 Identity = 132/204 (64.71%), Postives = 153/204 (75.00%), Query Frame = 1 Query: 1 VKSILREFGLDPSNLASGTTDSGSDIKALCINGLLPKFGTKWGWCFCHLMVKAAEQGFGVSLDPATSKNPEARDMLKHVIKVVETLNKSPNLRKKFEDLQVDMLGEVFKIVKHAPQRWLSLTRTVERIIRLWHVLRKLYSDEGKDFPLEQGDNKRGILQLYSLLQPLSSITRDGQYGGAPMTADIFMKFGLLKMDVLDMSKPLK 612 V +IL EFGL PS+LASGTTDSG D+K++ +NGL P+FG W CF HLMVKAAE GFG +DP SKNP+ARDMLK +I +V TL++S N + KF DLQVD+ GEVF APQRWL+L T+ER+IRLWHVLRKLYSD GK FPLE+GD ILQL SLLQPLSS+TRDGQYGGAPM LKM VLD S+ LK Sbjct: 41 VNAILHEFGLRPSDLASGTTDSGLDVKSVSVNGLHPQFGVLWNCCFYHLMVKAAEDGFGTHVDPQKSKNPKARDMLKKLINLVGTLHRSSNFKAKFGDLQVDVWGEVFP--NQAPQRWLTLVPTLERVIRLWHVLRKLYSDTGKTFPLEEGDITDCILQLNSLLQPLSSVTRDGQYGGAPM----------LKMRVLDPSEELK 232
BLAST of mRNA_L-elsbetiae_contig9343.18344.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 249 bits (635), Expect = 3.540e-77 Identity = 134/203 (66.01%), Postives = 145/203 (71.43%), Query Frame = 1 Query: 4 KSILREFGLDPSNLASGTTDSGSDIKALCINGLLPKFGTKWGWCFCHLMVKAAEQGFGVSLDPATSKNPEARDMLKHVIKVVETLNKSPNLRKKFEDLQVDMLGEVFKIVKHAPQRWLSLTRTVERIIRLWHVLRKLYSDEGKDFPLEQGDNKRGILQLYSLLQPLSSITRDGQYGGAPMTADIFMKFGLLKMDVLDMSKPLK 612 KSIL EFGL+PS LASGTTDSGSD+KA+ INGL FG W WCFCHLM KAAEQ F SLD SKNP ARD+LK VIKVVETLNKS NL KFEDLQVD+LGEVFK+VKHAPQRWL LTRT+ERIIRLWH PLSSITRD QYGGAPMTA+IFMKF LK +VLDMS+PL+ Sbjct: 29 KSILHEFGLNPSYLASGTTDSGSDVKAVSINGLWKHFGVLWNWCFCHLM-KAAEQPFCTSLDTVKSKNPAARDLLKTVIKVVETLNKSSNLGAKFEDLQVDLLGEVFKVVKHAPQRWLGLTRTLERIIRLWH--------------------------------PLSSITRDVQYGGAPMTAEIFMKFATLKTNVLDMSEPLR 198
BLAST of mRNA_L-elsbetiae_contig9343.18344.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 250 bits (639), Expect = 2.350e-75 Identity = 119/202 (58.91%), Postives = 154/202 (76.24%), Query Frame = 1 Query: 7 SILREFGLDPSNLASGTTDSGSDIKALCINGLLPKFGTKWGWCFCHLMVKAAEQGFGVSLDPATSKNPEARDMLKHVIKVVETLNKSPNLRKKFEDLQVDMLGEVFKIVKHAPQRWLSLTRTVERIIRLWHVLRKLYSDEGKDFPLEQGDNKRGILQLYSLLQPLSSITRDGQYGGAPMTADIFMKFGLLKMDVLDMSKPLK 612 S+LREFG+ S+LA GTTDSGSD+KA+C+N LL + W WC CHL +AAEQ FG S DP KN +AR +++ VIK +N+SP ++KF++ Q+ M GEV KI KHAPQRWLSL R +ERIIRLWHVLRK+Y+++G +FPL++GDNK ILQLYSLL+PL++ITRDGQYG PM+A++ M F LK + LD + PLK Sbjct: 302 SVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLK 503 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9343.18344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9343.18344.1 >prot_L-elsbetiae_contig9343.18344.1 ID=prot_L-elsbetiae_contig9343.18344.1|Name=mRNA_L-elsbetiae_contig9343.18344.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp VKSILREFGLDPSNLASGTTDSGSDIKALCINGLLPKFGTKWGWCFCHLMback to top mRNA from alignment at L-elsbetiae_contig9343:5580..6191- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9343.18344.1 ID=mRNA_L-elsbetiae_contig9343.18344.1|Name=mRNA_L-elsbetiae_contig9343.18344.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=612bp|location=Sequence derived from alignment at L-elsbetiae_contig9343:5580..6191- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9343:5580..6191- >mRNA_L-elsbetiae_contig9343.18344.1 ID=mRNA_L-elsbetiae_contig9343.18344.1|Name=mRNA_L-elsbetiae_contig9343.18344.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1224bp|location=Sequence derived from alignment at L-elsbetiae_contig9343:5580..6191- (Laminarionema elsbetiae ELsaHSoW15)back to top |