mRNA_L-elsbetiae_contig9340.18343.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig9340.18343.1
Unique Name	mRNA_L-elsbetiae_contig9340.18343.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig9340.18343.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 1.820e-77
Identity = 125/212 (58.96%), Postives = 168/212 (79.25%), Query Frame = 2

Query:    2 ITVCWTSSNLEGFIKMLKYIELAATNMFALTNFAICVNLALIVLSQRTLAIVKSVSSPRVMFLLLAVSMAVAALTAPSWEIVFVLGSCFWLSNADEGHANWIVVSLSLVGFIVGICMFIVVAWLLLFRMKEIRECWKLHVRIRYYFSLTIIGTAVNLALGICGMVFVFVNPDG-RLLAWSWIFRYIHVALDTVVLYGVLQQRDMDERGDGNR 634
            +TVCWT S+L GFIK +K+IE  ++NM A+T+ AICVNLALIV S RTL  V+SVSSP ++ LLLA+S+ + ++T P WE V+V+G+ FW+ N+D+G  + +VVS+  + F+VGICMF+++AWLLLFRMKE++ECW++  RIRYYF LT++GTAVN+ +GIC  VFV  + D  RL  WSW+ RYIHVALDT VLYGVL+++DMDERG   R
Sbjct:   74 VTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVLREKDMDERGGNAR 285

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BLAST of mRNA_L-elsbetiae_contig9340.18343.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 5.240e-76
Identity = 124/224 (55.36%), Postives = 169/224 (75.45%), Query Frame = 2

Query:    2 ITVCWTSSNLEGFIKMLKYIELAATNMFALTNFAICVNLALIVLSQRTLAIVKSVSSPRVMFLLLAVSMAVAALTAPSWEIVFVLGSCFWLSNADEGHANWIVVSLSLVGFIVGICMFIVVAWLLLFRMKEIRECWKLHVRIRYYFSLTIIGTAVNLALGICGMVFVFVN-PDGRLLAWSWIFRYIHVALDTVVLYGVLQQRDMDERGDGNRLPGVSSGHSAAG 670
            +TVCW   NLE  IK +K++ELA+++M ALT+ AICVNLALIV S RTL  V+SVSSP ++ L+LA+SM + A T P WE V V+G+ FW+ N+D+G  + +VVS+  + FIVG+CMF++VAWLLLFR+KE++ECW++H RIRYY  LT++GT ++L++GIC  VFV       RL  W+W+FRYIH+ALDT VLYGVL+++DMDER  GN  P   + +S  G
Sbjct:   25 VTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDMDER-VGNARPSDINSNSTVG 247

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BLAST of mRNA_L-elsbetiae_contig9340.18343.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 1.420e-75
Identity = 130/227 (57.27%), Postives = 164/227 (72.25%), Query Frame = 2

Query:    2 ITVCWTSSNLEGFIKMLKYIELAATNMFALTNFAICVNLALIVLSQRTLAIVKSVSSPRVMFLLLAVSMAVAALTAPSWEIVFVLGSCFWLSNADEGHANWIVVSLSLVGFIVGICMFIVVAWLLLFRMKEIRECWKLHVRIRYYFSLTIIGTAVNLALGICGMVFVF-VNPDGRLLAWSWIFRYIHVALDTVVLYGVLQQRDMDERG-DGNRLPGVSSGHSAAGRG 676
            I+VCW    LEGFIK LKY+E  ++NM A+TN AIC+NLAL+V S RTL+ V SVS+P ++ L LA+S+  AA + P W I  V G+ FW++NAD+  A+WI+VS+ ++ F+VGICMFI+V+WL+ FRM+ I+ECWKLH RIRYYF LT+IGTAVNLALGI G  +VF  N    LL+ +W FRY HVALDT+VLYGVL  R MDE G       G SSG   A  G
Sbjct:    9 ISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRHMDEGGGSAASTSGTSSGRLPASSG 235

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BLAST of mRNA_L-elsbetiae_contig9340.18343.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 2.050e-68
Identity = 112/224 (50.00%), Postives = 161/224 (71.88%), Query Frame = 2

Query:    2 ITVCWTSSNLEGFIKMLKYIELAATNMFALTNFAICVNLALIVLSQRTLAIVKSVSSPRVMFLLLAVSMAVAALTAPSWEIVFVLGSCFWLSNADEGHANWIVVSLSLVGFIVGICMFIVVAWLLLFRMKEIRECWKLHVRIRYYFSLTIIGTAVNLALGICGMVFVFVNPDGRL-LAWSWIFRYIHVALDTVVLYGVLQQRDMDERGDGNRLPGVSSGHSAAG 670
            ++ C+ ++NL G IK + ++ + ++NM A TN  IC+NLALIV S RT+  VK+VSSPRV+F++L VS ++AA T P WE   VLG+ FW +N+D    ++I++S+ ++ F+VGICM ++V WL +FRM EI+ECW+ H RIRYYF LT+ GTAVNL LGICG  +VF +    L   WSW+FRYIH++ DT+VLYG L++  +DER + +R      GH+A+G
Sbjct:   24 VSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLYGALREGSIDERAEADRSSQDGHGHNASG 247

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BLAST of mRNA_L-elsbetiae_contig9340.18343.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 3.260e-68
Identity = 114/199 (57.29%), Postives = 149/199 (74.87%), Query Frame = 2

Query:    2 ITVCWTSSNLEGFIKMLKYIELAATNMFALTNFAICVNLALIVLSQRTLAIVKSVSSPRVMFLLLAVSMAVAALTAPSWEIVFVLGSCFWLSNADEGHANWIVVSLSLVGFIVGICMFIVVAWLLLFRMKEIRECWKLHVRIRYYFSLTIIGTAVNLALGICGMVFVFVNPDGRLL-AWSWIFRYIHVALDTVVLYGVL 595
            + VCW  SN+ GF+K LK++EL A+NM A+TN AIC NLAL+++S RTLA VKS SSP ++FL LAVS+AVA   AP W+   V G+ F + N D+   +W+ VS   + F+VGICMF++VAWLLLFR+ E++ECWK+H RIRYYF LT+IGT VNLALG+CG ++V    +  LL   +W FR+IH+ALDT VLYGVL
Sbjct:    2 VLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVL 200

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BLAST of mRNA_L-elsbetiae_contig9340.18343.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 2.980e-60
Identity = 99/173 (57.23%), Postives = 134/173 (77.46%), Query Frame = 2

Query:    2 ITVCWTSSNLEGFIKMLKYIELAATNMFALTNFAICVNLALIVLSQRTLAIVKSVSSPRVMFLLLAVSMAVAALTAPSWEIVFVLGSCFWLSNADEGHANWIVVSLSLVGFIVGICMFIVVAWLLLFRMKEIRECWKLHVRIRYYFSLTIIGTAVNLALGICGMVFVFVNPDG 520
            I+VCW    LEGFIK LKY+E  ++NM A+TN AIC+NLAL+V S RTL+ VKSVS+P ++ L LA+S+  AA + P W I  V G+ FW++NAD+  A+WI+VS+ ++ F+VGICMF++V+WL+ FRM+ I+ECWK+H RIRYYF LT+I TAVNLALGI G+ +VF +  G
Sbjct:    2 ISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYVFRDNAG 174

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BLAST of mRNA_L-elsbetiae_contig9340.18343.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 9.710e-58
Identity = 102/217 (47.00%), Postives = 150/217 (69.12%), Query Frame = 2

Query:    2 ITVCWTSSNLEGFIKMLKYIELAATNMFALTNFAICVNLALIVLSQRTLAIVKSVSSPRVMFLLLAVSMAVAALTAPSWEIVFVLGSCFWLSNADEGHANWIVVSLSLVGFIVGICMFIVVAWLLLFRMKEIRECWKLHVRIRYYFSLTIIGTAVNLALGICGMVFVFVNPDGRLLA-WSWIFRYIHVALDTVVLYGVLQQRDMDERGDGNRLPGVS 649
            I+VCW   NL  FIK LK++EL A+NM A+TN AICVNL+LIV+S+R  + VKS+S+ +++ L LA+S  +AA+  P W +  + G+ FW    ++    ++++S  +V F+VGICMF++V+WLLLFRM EI+ECW +H  +RYYF LT++GT  NL LG+CG ++V  +    LL  +SW FR + +ALDT+VL+ VL  + +DER +     G S
Sbjct:    2 ISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLHSVLATKSVDERAETPPTDGAS 218

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BLAST of mRNA_L-elsbetiae_contig9340.18343.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 9.140e-52
Identity = 95/167 (56.89%), Postives = 122/167 (73.05%), Query Frame = 2

Query:    2 ITVCWTSSNLEGFIKMLKYIELAATNMFALTNFAICVNLALIVLSQRTLAIVKSVSSPRVMFLLLAVSMAVAALTAPSWEIVFVLGSCFWLSNADEGHANWIVVSLSLVGFIVGICMFIVVAWLLLFRMKEIRECWKLHVRIRYYFSLTIIGTAVNLALGICGMVFV 502
            I+VCW   NL   IK LK++ELA+ NM A+TN AICVNLAL+V+S RTL+ V S+SSPRV++L L +++  AA   PSW+ + + G+ F   + D+   +W VVS  L  FIVGICM  +VAWLLLFRMKEI+ECWK+H RIRYYF LT+I T VNL LGI G V++
Sbjct:    2 ISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGTYFSPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYI 168

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BLAST of mRNA_L-elsbetiae_contig9340.18343.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 4.470e-49
Identity = 88/167 (52.69%), Postives = 122/167 (73.05%), Query Frame = 2

Query:    2 ITVCWTSSNLEGFIKMLKYIELAATNMFALTNFAICVNLALIVLSQRTLAIVKSVSSPRVMFLLLAVSMAVAALTAPSWEIVFVLGSCFWLSNADEGHANWIVVSLSLVGFIVGICMFIVVAWLLLFRMKEIRECWKLHVRIRYYFSLTIIGTAVNLALGICGMVFV 502
            ++VCW   +L   IK LK+ ELAA+NM A+TN AICVNLALIV+S RTL+ V+S S+P ++ + LA+S+ VAA++ P W  + V G+ FW+   ++   +WIVV+   V F VGICM ++V WL++FR  EI++ WK+H RIRYYF LT+I T VNLALGICG ++V
Sbjct:  100 VSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYV 266

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BLAST of mRNA_L-elsbetiae_contig9340.18343.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 1.240e-46
Identity = 86/167 (51.50%), Postives = 119/167 (71.26%), Query Frame = 2

Query:    2 ITVCWTSSNLEGFIKMLKYIELAATNMFALTNFAICVNLALIVLSQRTLAI-VKSVSSPRVMFLLLAVSMAVAALTAPSWEIVFVLGSCFWLSNADEGHANWIVVSLSLVGFIVGICMFIVVAWLLLFRMKEIRECWKLHVRIRYYFSLTIIGTAVNLALGICGMVF 499
            I+VCWT +NL   IK  K++ELA+ NM A+TN AIC+NLAL+V+S       V S+SSP ++ + L +S+  AA  AP WE + + G+ F+    ++  ++WI +S   + F VGICMF++VAWLLLFRM EI+ECWK+H RIRYYF LT+I T VNL LGICG+++
Sbjct:    6 ISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIY 172

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig9340.18343.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig9340.18343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16


Match Name	E-value	Identity	Description
D7FTK5_ECTSI	1.820e-77	58.96	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FTK4_ECTSI	5.240e-76	55.36	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K8K6_9PHAE	1.420e-75	57.27	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JWL8_9PHAE	2.050e-68	50.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LNN1_ECTSI	3.260e-68	57.29	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LNN2_ECTSI	2.980e-60	57.23	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LNP0_ECTSI	9.710e-58	47.00	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5KRY2_9PHAE	9.140e-52	56.89	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LNM4_ECTSI	4.470e-49	52.69	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LNM5_ECTSI	1.240e-46	51.50	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig9340	contig	L-elsbetiae_contig9340:2910..6979 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	signal peptide
Exons	4
Model size	1522
Cds size	714
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig9340.18343.1	prot_L-elsbetiae_contig9340.18343.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig9340 2956..6217 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622817003.9377923-UTR-L-elsbetiae_contig9340:2909..2955	1622817003.9377923-UTR-L-elsbetiae_contig9340:2909..2955	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig9340 2910..2955 +
1691683975.851942-UTR-L-elsbetiae_contig9340:2909..2955	1691683975.851942-UTR-L-elsbetiae_contig9340:2909..2955	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig9340 2910..2955 +
1622817004.0030818-UTR-L-elsbetiae_contig9340:6217..6979	1622817004.0030818-UTR-L-elsbetiae_contig9340:6217..6979	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig9340 6218..6979 +
1691683975.9266777-UTR-L-elsbetiae_contig9340:6217..6979	1691683975.9266777-UTR-L-elsbetiae_contig9340:6217..6979	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig9340 6218..6979 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622817003.9530437-CDS-L-elsbetiae_contig9340:2955..3042	1622817003.9530437-CDS-L-elsbetiae_contig9340:2955..3042	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9340 2956..3042 +
1691683975.864208-CDS-L-elsbetiae_contig9340:2955..3042	1691683975.864208-CDS-L-elsbetiae_contig9340:2955..3042	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9340 2956..3042 +
1622817003.9661293-CDS-L-elsbetiae_contig9340:4012..4168	1622817003.9661293-CDS-L-elsbetiae_contig9340:4012..4168	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9340 4013..4168 +
1691683975.8838549-CDS-L-elsbetiae_contig9340:4012..4168	1691683975.8838549-CDS-L-elsbetiae_contig9340:4012..4168	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9340 4013..4168 +
1622817003.9778616-CDS-L-elsbetiae_contig9340:4949..5176	1622817003.9778616-CDS-L-elsbetiae_contig9340:4949..5176	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9340 4950..5176 +
1691683975.897905-CDS-L-elsbetiae_contig9340:4949..5176	1691683975.897905-CDS-L-elsbetiae_contig9340:4949..5176	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9340 4950..5176 +
1622817003.9921196-CDS-L-elsbetiae_contig9340:5973..6217	1622817003.9921196-CDS-L-elsbetiae_contig9340:5973..6217	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9340 5974..6217 +
1691683975.9149406-CDS-L-elsbetiae_contig9340:5973..6217	1691683975.9149406-CDS-L-elsbetiae_contig9340:5973..6217	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9340 5974..6217 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig9340:2910..6979+
coding sequence from alignment at L-elsbetiae_contig9340:2910..6979+

protein sequence of mRNA_L-elsbetiae_contig9340.18343.1

>prot_L-elsbetiae_contig9340.18343.1 ID=prot_L-elsbetiae_contig9340.18343.1|Name=mRNA_L-elsbetiae_contig9340.18343.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp
MLKYIELAATNMFALTNFAICVNLALIVLSQRTLAIVKSVSSPRVMFLLL
AVSMAVAALTAPSWEIVFVLGSCFWLSNADEGHANWIVVSLSLVGFIVGI
CMFIVVAWLLLFRMKEIRECWKLHVRIRYYFSLTIIGTAVNLALGICGMV
FVFVNPDGRLLAWSWIFRYIHVALDTVVLYGVLQQRDMDERGDGNRLPGV
SSGHSAAGRGARGGFARSNSTSISASPPTGVAPVRCA*

mRNA from alignment at L-elsbetiae_contig9340:2910..6979+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig9340.18343.1 ID=mRNA_L-elsbetiae_contig9340.18343.1|Name=mRNA_L-elsbetiae_contig9340.18343.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4070bp|location=Sequence derived from alignment at L-elsbetiae_contig9340:2910..6979+ (Laminarionema elsbetiae ELsaHSoW15)
GATCACTGTGTGCTGGACCTCGAGTAACTTGGAGGGCTTCATCAAGATGC
TCAAGTACATCGAGCTGGCTGCGACTAACATGTTTGCTCTCACGAACTTC
GCCATCTGCGTCAATCTTGCCCTCATCGTCCTGGTGAGCAACGAAGACAG
ACAGCAGTATTTGTTTTTTCATAACATTAATTTTCAGTGCTCGATGGTCT
CCTTGCCACGAGGGTGGCATCTTGCCAGAGCACCGAACCGTGGTCATACA
GAAGGGCTCCTTTCCCCAAGGCCCCCACTCCCCTCTTCTGCGGTGCTTTC
CTAAGATTTTTGTCGCGAGAAGGGTTCAGCCGTCCCTTTCCCTCGTCGAC
GGCGAGGTCGAAGTATTAGGTCCGCCATTTGCACCCTTGATGCATTCTAA
AATGGACCTGTGTCCACGGGGGGGGAGGGTATGCCCAGCTTACTCTCGTT
TCGTGCGTGCTATCTTTGAGACTTGCTTCGCGATCGAGCCAACACAAGGT
ACATTGTCCAATCAATCCTGGCCACATTTTTAATCCATATTCAACGCGAG
GGCTGTCCCCGCGATTTGCCGTGTTTGGAGGGTGCATTTATGTGCTGGTG
TAGTAATAGAAGTATGTCCTCTTGTACTGCTGCTGCTGCCGCCCGCGGAC
CTTCATGATTCGCTGTCGCCAGCTCACGCTTTGTTGGAGTACAAGGGCCG
TATTTATGCACACGCTGAATGCTCTGACTCTGTTTTGACGAAAATAAGTA
AAGGCACGAGTCAGTACCACTCCCTCACCTCGTTGTGATGACCTTCTTCC
ATAAGGTGAACGTCAATGGCTCGACTTCTTCTGTGTACTGTGAGACGCAA
AAACGCCTCTCCGTGTGTAGGCTACATACAAACTTGCAAGTGCAACTCGA
ACGGTAGCGGTGCCCTCTTCCTCTTGACACCCACCACGAAGAGTCACCAA
CGCATCTATCCACACATACATACATCCCCGCCATTTACTCTTACTTTTCC
CGCCGCGCTGCTGACTTTGGGATACATATCTGCTGCCTGCCTGTCGCCCT
GCGCCTCTGGGGCGTCCTTGGTGGTGTGGTGATGACGGCGCCATGGCATC
CAGTCTCAACGAACGTTAGCCATCGTCAAGAGCGTCAGCTCACCCCGGGT
GATGTTTCTGCTACTGGCGGTCTCCATGGCCGTAGCGGCTCTCACGGCTC
CGTCTTGGGAGATAGTTTTTGTCCTAGGGAGTTGCTTCTGGCTCTCCAAC
GCTGACGAGGTACGGAAGCACTTATGTACATTGTTTTGCTTTGTGTTTCA
TCTGTGTCGTGCTATGTCCCGTGAAGCTCTTGGTTTGAATTTTGTCTGCT
TGGGGCAGCACGCCATCTGTTGGACGCATGTATGTCCCCCTCCTTGTGTT
GTCGTTTGGATATATACATTTTTTTTAAATACGAATATGACGAGGCTTCG
AGCTTTCTTTTTCATGATTCTGATCTAAATTTTGGCGTTCGACGATACCA
GCAAGCAAACGCAACTTGCCCCGTTCCTCAAGCCTCGTGCTTTTGTGTTT
TATCCTTCACCCATGTGGTGGCGTTCGGATGGGGTCACAGACTCGATGTT
CGCTATGATTACGTACGCCATGATGTCGAAACGATAGACCGTATTTCGTA
CCACAGTGGTGCGTATGTTGTTTGCCTAGCCTCACCATATGAACTACTTG
CACGTAGCCGATTTTTGGGGGGTCTTCATGGGCTCGGCTGCACGCAACTG
AGAAAAAGGAGAGAGGGGGGGCAAGAGGGAGGGATACGAGGACCGCGAGA
CAGAGAGAGGGAGAGAGAGAGTCGACCTTCCCCAGTAGCAGCCACCCCAA
ACCTAACCCCCAACGACCCTCTTCCTAATCCTAAGCCTCCCGGAACCTGC
GCTCAGCCTGCAGGTTTACATCAATCCCCACGCCTTCCTTGCCTCGACGC
GTCTTGCCATTCGTGGTTTTATTAATAATTGTATTGAGTTACTCTTGATG
TCCCCACACCTCCTCTTGCGACCATGGCCAATCAACGCAGGGCCACGCAA
ACTGGATCGTAGTCTCACTGTCCCTGGTCGGCTTCATCGTCGGGATCTGC
ATGTTCATCGTGGTGGCCTGGCTGCTGCTGTTCCGGATGAAGGAGATCAG
AGAGTGCTGGAAGCTACACGTTCGCATCCGCTACTACTTCAGCCTCACCA
TAATCGGCACGGCAGTCAACCTGGCCCTTGGCATATGCGGCATGGTCTTC
GTCTTCGTGAATCCGGAGTGAGTGGACGGACCAACTATGCTGTACTGTAA
TAATCGGGAAGTGTTGCGAGGGGCAGGGAGGAGGTGCGGAGGACAATTAA
TCGTGGTCTATGTAGTGCTACACCTGCGCCATCGTGGGTTTGAGGGGATT
GAAAATCATGCCCTTGTCGTTCGTCGCGATACGTACTCGAGAGTTTCAGA
GCGAAAGTTTAGTTCGTGGAAACTACCGTTGAGAAAGAAGCCCGTTGCTA
CACATATCTATGTCGTCGAATTGAGCAGAGAGGCACCATTTTGTTTGTTA
CTCGACGTGAATGATGGCTCGCTCCTTCTCCCGAAAATAGCCACAGATAT
TTGATGCAACTACCCCCTCTCTCAGAATGCAGAATGGCCGTGCTCTGTTG
CAAGGTGGCCACCTCATTGACCGGCATCGTATCGGGAAAAGCAAGCTTGC
CTGAACTGCTTTATCCCTCCTCGAAAGCAAATCAACTTGCTCAAGAAGAC
GTTCGGCCTGCATGTGTATATGTACGTATGTGGGTGGAGGTGAAACGGCG
ATCGACACGCGAAGGTACGCGCAGAAGCTAGAAGGAGTGTTGATTATCTT
GCTGTGCCTGTGCTGTTTCAAGCATGCGGGATGTATGCAGATAGAGTGTG
CTCGCCGGCGCGAAGACGCAACGCCGAGCGGGTGTGGTGCGCTGGAACTC
TATCCATTGCTGCTAAATAATGTTCGCTCGTCCCCGCCGATTTGCCCCCT
CCCTCGTTGTACTTCGTGTGTTTTTCGCTCGCCGCACGTGTTCGAACACG
ATGACGGCACGAAGTGGGCGTCTGCTGGCCTGGAGCTGGATCTTCAGGTA
CATCCACGTTGCTCTGGACACCGTCGTCTTGTACGGCGTGCTTCAACAAA
GGGACATGGACGAACGCGGCGACGGCAACCGATTGCCCGGTGTGTCATCC
GGACATTCCGCGGCTGGACGAGGCGCGCGTGGAGGGTTTGCAAGGTCCAA
CAGCACGAGCATCTCCGCGAGCCCTCCCACGGGTGTAGCCCCCGTTCGCT
GCGCATAACATCATCCGGGTCACTAGAGAGCCTGGCCCCACCAAGGTGTC
TTCTCTCTTCTTGCTATGTACACGTTAGCAGTGTATGCCGTACATCCAGC
TAACGGGAAAGGAAAACCCAGGAGAACCCCCCCCCGGCTTTAGTGGTACA
AACCCGTTTTTTCCTTGGGCGTGTTATCTCGGGCGGGTCGGGTAACGTGT
AGGATCGATTGATATCACGCGCAGATTTGGAGGGGGGTATGCGCTTGAAC
GGTGGTTTATCTGCGCGAGCGACTACGGTACACACTTACTTTCGTTTGAA
GAAGGTAAATAACGGGGTTGGCTTTCGTACCCATTGCGAAATCGTAAATG
TGAGCAACTTCCAAGTAGGGGGCGAATGAGAAGCAGGAGACACCTAGCTT
CGTCGTGTTAGTCTTATGTTTGTGTGTATGTGTTTTCCCGTCGTGATGCT
GAGGTGTTCTACATTGTGTGGGCAGCATCTCTGTTGTGCAACATTTCACA
GAGTAGACAATCTCCGGTTTTGTGTTCACGAGAGGGATGTATGTAACGCG
ATATCATCGTCAGGTGTTCGTTGAGTGGGAGGAGCGTGAACATCCCGATT
TACACCACGCTGCACCAACAGAGCTTTTAAAGGATCGGTGTTCGGCCTTC
GTGTGGCACAATCTCTTTGCAGTGTAAGAGTTTCGTCCCCTCTTTTTTTA
CTCTTCTGTGACGGTACTCGCACTGGGCGTTGTCCACGTTTTCGTGGTTG
TTTCGTCCATCTTTTGCTGG

Coding sequence (CDS) from alignment at L-elsbetiae_contig9340:2910..6979+

>mRNA_L-elsbetiae_contig9340.18343.1 ID=mRNA_L-elsbetiae_contig9340.18343.1|Name=mRNA_L-elsbetiae_contig9340.18343.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig9340:2910..6979+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTCAAGTACATCGAGCTGGCTGCGACTAACATGTTTGCTCTCACGAA
CTTCGCCATCTGCGTCAATCTTGCCCTCATCGTCCTGATGCTCAAGTACA
TCGAGCTGGCTGCGACTAACATGTTTGCTCTCACGAACTTCGCCATCTGC
GTCAATCTTGCCCTCATCGTCCTGTCTCAACGAACGTTAGCCATCGTCAA
GAGCGTCAGCTCACCCCGGGTGATGTTTCTGCTACTGGCGGTCTCCATGG
CCGTAGCGGCTCTCACGGCTCCGTCTTGGGAGATAGTTTTTGTCCTAGGG
AGTTGCTTCTGGCTCTCCAACGCTGACGAGTCTCAACGAACGTTAGCCAT
CGTCAAGAGCGTCAGCTCACCCCGGGTGATGTTTCTGCTACTGGCGGTCT
CCATGGCCGTAGCGGCTCTCACGGCTCCGTCTTGGGAGATAGTTTTTGTC
CTAGGGAGTTGCTTCTGGCTCTCCAACGCTGACGAGGGCCACGCAAACTG
GATCGTAGTCTCACTGTCCCTGGTCGGCTTCATCGTCGGGATCTGCATGT
TCATCGTGGTGGCCTGGCTGCTGCTGTTCCGGATGAAGGAGATCAGAGAG
TGCTGGAAGCTACACGTTCGCATCCGCTACTACTTCAGCCTCACCATAAT
CGGCACGGCAGTCAACCTGGCCCTTGGCATATGCGGCATGGTCTTCGTCT
TCGTGAATCCGGAGGCCACGCAAACTGGATCGTAGTCTCACTGTCCCTGG
TCGGCTTCATCGTCGGGATCTGCATGTTCATCGTGGTGGCCTGGCTGCTG
CTGTTCCGGATGAAGGAGATCAGAGAGTGCTGGAAGCTACACGTTCGCAT
CCGCTACTACTTCAGCCTCACCATAATCGGCACGGCAGTCAACCTGGCCC
TTGGCATATGCGGCATGGTCTTCGTCTTCGTGAATCCGGATGGGCGTCTG
CTGGCCTGGAGCTGGATCTTCAGGTACATCCACGTTGCTCTGGACACCGT
CGTCTTGTACGGCGTGCTTCAACAAAGGGACATGGACGAACGCGGCGACG
GCAACCGATTGCCCGGTGTGTCATCCGGACATTCCGCGGCTGGACGAGGC
GCGCGTGGAGGGTTTGCAAGGTCCAACAGCACGAGCATCTCCGCGAGCCC
TCCCACGGGTGTAGCCCCCGTTCGCTGCGCATAATGGGCGTCTGCTGGCC
TGGAGCTGGATCTTCAGGTACATCCACGTTGCTCTGGACACCGTCGTCTT
GTACGGCGTGCTTCAACAAAGGGACATGGACGAACGCGGCGACGGCAACC
GATTGCCCGGTGTGTCATCCGGACATTCCGCGGCTGGACGAGGCGCGCGT
GGAGGGTTTGCAAGGTCCAACAGCACGAGCATCTCCGCGAGCCCTCCCAC
GGGTGTAGCCCCCGTTCGCTGCGCATAA