mRNA_L-elsbetiae_contig9337.18336.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9337.18336.1 vs. uniprot
Match: D8LI21_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI21_ECTSI) HSP 1 Score: 318 bits (815), Expect = 4.790e-94 Identity = 208/394 (52.79%), Postives = 248/394 (62.94%), Query Frame = 1 Query: 880 PRRRTLAD-----ARRKGVR-VAPSPASLATSAVLEVAEGVVAGARSLSPLEAFVPGAREALGVVAGLARLAAADHRGDTRDMKLRVRWCRGVVLTLERARKLLGKATASDVNPKRLALEAVREPVEGMVEIVQSYKSKHVVSDVFYSSLFRHRHAQAQEALLLAERHLSALDAKDAEDERETSEVILAKNDGMRRRRQSVLLDLVDIPAASLDVMRDEVLGLGGFGTVYLADLGGGINAAAKIVAFKP---------DRHGRS------GGGDDXXXXXXXXXXXXXXXXXQGYQSEEEAEIA-----------------------------ADPTDVKARRKAAVAKAKRAAYLKRMLTRDRLAFCRELEAMKRLRGPNTVHTYGAVTSLGR 1911 PRRR+L D ARR R + S +S+A S+VL+ AEG VAGA+SLSPLE FVPGARE GVVAGLARLAAA H+GD +D + RVRWCR VVLTLERA +LGKAT D + R+AL AVREPV MVEIV SYK+KHVVS+VF+S++FR R +A EA+L AER LSA ++E +R+TSEVILAK + RR RQ+VLLD VDIP +SL+++ DEVLGLGGFGTV+LADL GG+NAAAK+V F D G S G DD G S A + +P+D KARR+A VAKAKR+A L R R R A C+ELE MKRLRGP TVHTYG VT+L R Sbjct: 333 PRRRSLGDDPQARARRTAGRFTSSSSSSIAASSVLQAAEGAVAGAQSLSPLETFVPGAREVSGVVAGLARLAAASHKGDPKDKRRRVRWCRSVVLTLERALAVLGKATEQDTDAIRVALGAVREPVACMVEIVHSYKNKHVVSEVFFSTMFRRRQKEADEAILSAERLLSARQ-DNSESQRKTSEVILAKAERKRRHRQTVLLDEVDIPPSSLEIVEDEVLGLGGFGTVFLADLAGGLNAAAKVVTFPRGSADHGCGGDEDGASRADDGDGDEDDDVEYDASIDTGCNNSVNDGNISSGSAPVPPVAVAAVHDNRSPSMAGDRAVDLLPRLRIVEPSDQKARRRAVVAKAKRSAALARAEARQRQALCQELEYMKRLRGPRTVHTYGGVTALAR 725
BLAST of mRNA_L-elsbetiae_contig9337.18336.1 vs. uniprot
Match: D8LTP7_ECTSI (Two component regulator three Y domain protein/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP7_ECTSI) HSP 1 Score: 140 bits (353), Expect = 4.790e-31 Identity = 114/330 (34.55%), Postives = 165/330 (50.00%), Query Frame = 1 Query: 961 VLEVAEGVVAGARSLSPLEAFVPGAREALGVVAGLARLAAADHRGDTRDMKLRVRWCRGVVLTLERARKLLGK---ATASDVNPKRLALEAVREPVEGMVEIVQSYKSKHVVSDVFYSSLFRHRHAQAQEALLLAERHLS-ALDAKDAEDERETSEVILAKNDGMRR-----------RRQSVLLDLVDIPAASLDVMRDEVLGLGGFGTVYLADLGGGINAAAKIVAFKPDRHGRSGGGDDXXXXXXXXXXXXXXXXXQGYQSEEEAEIAADPTDVKARRKAAVAKAKRAAYLKRMLTRDRLAFCRELEAMKRLRGPNTVHTYGAVTSL 1905 VL++A +AGA +L+ ++F PG REA VVAGL LA +DH+ + ++ + R RWCR +V TLERA ++LGK A D + L+ V++ + +++I++SYKSK+ +S VF S+L + R +A+ A+ A + L L + ++ E + D RR +R+ LD ++IPA+ ++V +EVLG GGFGTVYLADL G +NAAAK+V+ + R R F RELEAMKRLRGP+TV YGAVTSL Sbjct: 404 VLDIATAALAGAEALAQ-QSFFPGVREAASVVAGLVGLA-SDHKNNGKESEKRARWCRSIVHTLERAAEVLGKEAKAGKGDSQAVHVLLDDVQDSIADLLQIIESYKSKNALSKVFVSTLCKKRQEEAEVAINAAVQRLQLGLQVRVGQNLASVGEAVQEGLDLHRRASQESEMVTKKKRRQHRLDQLEIPASDVEVT-NEVLGRGGFGTVYLADLHG-LNAAAKVVSREHQR-------------------------------------------------------------------QRRMFMRELEAMKRLRGPHTVTIYGAVTSL 662
BLAST of mRNA_L-elsbetiae_contig9337.18336.1 vs. uniprot
Match: D8LTP4_ECTSI (Putative Leucine Rich Repeat Protein Kinase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP4_ECTSI) HSP 1 Score: 139 bits (351), Expect = 8.760e-31 Identity = 109/311 (35.05%), Postives = 157/311 (50.48%), Query Frame = 1 Query: 1015 EAFVPGAREALGVVAGLARLAAADHRGDTRDMKLRVRWCRGVVLTLERARKLLGKATAS--DVNPKRLALEAVREPVEGMVEIVQSYKSKHVVSDVFYSSLFRHRHAQAQEALLLAERHLS-ALDAKDAEDERETSEVI---------LAKNDGM--RRRRQSVLLDLVDIPAASLDVMRDEVLGLGGFGTVYLADLGGGINAAAKIVAFKPDRHGRSGGGDDXXXXXXXXXXXXXXXXXQGYQSEEEAEIAADPTDVKARRKAAVAKAKRAAYLKRMLTRDRLAFCRELEAMKRLRGPNTVHTYGAVTSL 1905 ++F PG REA VVAGL RLA +DH+ + R+ + R RWCR +V TLERA ++L K A D R+ L+ V++ + +++I++SYKSK+ +S VF SSL + R +A+ A+ A + L L + +D E + ++ GM +++R+ +D ++IPA+ ++V +EVLG GGFGTVYLADL G +NAAAK+V+ + R R F RELEAMKRLRGP+TV YGAVTSL Sbjct: 433 QSFFPGVREAASVVAGLVRLA-SDHKSNGRESEKRARWCRSIVHTLERAGEVLAKVKAGRGDDQAVRVLLDDVQDSIADLLQIIESYKSKNALSKVFVSSLCKKRQEEAEVAINAAVQRLQLGLQVRVGQDLASVGEAVQEGLNLHQRASEESGMVSKKKRRQHRMDQLEIPASDVEVT-NEVLGRGGFGTVYLADLHG-LNAAAKVVSREHQR-------------------------------------------------------------------QRRMFMRELEAMKRLRGPHTVTIYGAVTSL 673
BLAST of mRNA_L-elsbetiae_contig9337.18336.1 vs. uniprot
Match: A0A6H5JVI4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI4_9PHAE) HSP 1 Score: 139 bits (349), Expect = 1.920e-30 Identity = 135/355 (38.03%), Postives = 191/355 (53.80%), Query Frame = 1 Query: 961 VLEVAEGVVAGARSLSPLEAFVPGAREALGVVAGLARLAAADHRGDTRDMKLRVRWCRGVVLTLERARKLLGKATAS-----DVNPKRLALEAVREPVEGMVEIVQSYKSKHVVSDVFYSSLFRHRHAQAQEALLLAERHL----------SALDAKDAEDE-----RETSEVILAKNDGMRRRRQSVLLDLVDIPAASLDVMRDEVLGLGGFGTVYLADLGGGINAAAKIVAFKPDR-------------HGRSG---GG----DDXXXXXXXXXXXXXXXXXQGYQSEEEAEIAADPTDVKARRKAAVAKAKRAAYLKRMLTRDRLAFCRELEAMKRLRGPNTVHTYGAVTSL 1905 VL++A +AGA +L+ ++F PG REA VVAGL LA +DH+ + ++ + R RWCR +V TLERA ++LGKA + D + L+ V++ + +++I++SYKSK+ +S VF S+L + R +A+ A+ A + L + +A E R S +++R+ LD ++IPA+ ++V +EVLG GGFGTVYLADL G +NAAAK+V F+ +G G GG D XXXXXXXXXXX E PTD + +R + R + R R F RELEAMKRLRG +TV YGAVTSL Sbjct: 541 VLDIATAALAGAEALAE-QSFFPGVREAASVVAGLVGLA-SDHKNNGKESEKRARWCRSIVHTLERAAEVLGKAREAKGGKGDSQAVHVLLDDVQDSIADLLQIIESYKSKNSLSKVFVSTLCKKRQEEAEVAINAAVQRLQLGLQVHVGQNLASVGEAVQEGINFHRRASRASWESEMVTKKKRRQHRLDQLEIPASDVEVT-NEVLGRGGFGTVYLADLHG-LNAAAKVVVFEXXXXXXXEYDCTDCVSNGTDGVLDGGHGVLDCTGDGESXXXXXXXXXXXXXXXXXXXTESTTMPTDSQQQRLS------RVSQQXXXXXRQRRMFMRELEAMKRLRGLHTVTIYGAVTSL 885
BLAST of mRNA_L-elsbetiae_contig9337.18336.1 vs. uniprot
Match: A0A6H5KQ31_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ31_9PHAE) HSP 1 Score: 129 bits (325), Expect = 5.730e-29 Identity = 105/207 (50.72%), Postives = 125/207 (60.39%), Query Frame = 1 Query: 1417 VILAKNDGMRRRRQSVLLDLVDIPAASLDVMRDEVLGLGGFGTVYLADLGGGINAAAKIVAFKPDRHGRSGGGDDXXXXXXXXXXXXXXXXX-----------------QGYQSEEEAEIAA-------------------------DPTDVKARRKAAVAKAKRAAYLKRMLTRDRLAFCRELEAMKRLRGPNTVHTYGAVTSLGR 1911 +ILAK + RR RQ+VLLD VDIP+++L+++ DEVLGLGGFGTV+LADL GG+NAAAK+V F G GDDXXXXXXXXXXXXXXXXX G S A + +P+D KARR+A VAKAK++A L R R R A C+ELE MKRLRGP TVHTYG VT+L R Sbjct: 1 MILAKAERKRRHRQTVLLDEVDIPSSTLEIVEDEVLGLGGFGTVFLADLAGGLNAAAKVVTFPRGSAGHGCDGDDXXXXXXXXXXXXXXXXXXVEYDASIDTGCNNSVNDGNISSSSAPVPTIVHDNRSPSMAGDRAVDLLPRLRIVEPSDQKARRRAVVAKAKKSAALARAEARQRQALCQELEYMKRLRGPRTVHTYGGVTALAR 207
BLAST of mRNA_L-elsbetiae_contig9337.18336.1 vs. uniprot
Match: A0A6H5L241_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L241_9PHAE) HSP 1 Score: 104 bits (260), Expect = 7.950e-20 Identity = 77/173 (44.51%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 880 PRRRTLAD-----ARRKGVRVAP---SPASLATSAVLEVAEGVVAGARSLSPLEAFVPGAREALGVVAGLARLAAADHRGDTRDMKLRVRWCRGVVLTLERARKLLGKATASDVNPKRLALEAVREPVEGMVEIVQSYKSKHVVSDVFYSSLFRHRHAQAQEALLLAERHLSA 1374 PRRR+L D ARR R A S +S+A S+VL+ AEG VAGA+SLSPLE FVPGARE GV AT D + R+AL AVREPV MVEIV SYK+ HVVS+VF+S++FR R +A EA+L AER + A Sbjct: 462 PRRRSLGDDPQARARRTAGRFASASSSSSSIAASSVLQAAEGAVAGAQSLSPLETFVPGAREVSGV------------------------------------------ATEQDTDAIRVALGAVREPVACMVEIVHSYKNTHVVSEVFFSTMFRRRQKEADEAILSAERLVRA 592
BLAST of mRNA_L-elsbetiae_contig9337.18336.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 4.650e-15 Identity = 100/336 (29.76%), Postives = 146/336 (43.45%), Query Frame = 1 Query: 1024 VPGAREALGVVAGLARLAAADHRGDTRDMKLRVRWCRGVVLTLERARKLLGKATASDVNPKRLALEAVREPVEGMVEIVQSYKSKHVVSDVFYSSLFRHRHAQAQEALLLAERHLSAL----------DAKDAED--------------------------------ERETSEVILAKNDGMRRRRQSVLLDLVDIPAASLDVMRDEVLGLGGFGTVYLADLGGGINAAAKIVAFKPDRHGRSGGGDDXXXXXXXXXXXXXXXXXQGYQSEEEAEIAADPTDVKARRKAAVAKAKRAAYLKRMLTRDRLAFCRELEAMKRLRGPNTVHTYGAVTSL 1905 VPG EA V+ +A L D+R + R+ R+R CR +V+ L+RA K++GK + R+ +E V + + +VE++++++SK+ +S +F S+LF+ R E + +R ++ L D +D E TSE + A+ +RR+R+ LD V+IP L + D +LG GGFG VYLAD G NAAAK++ D G E + K+ TR R F RELEAM RLR PNTV+ YGAVTSL Sbjct: 605 VPGISEAAAVLCIMANLF-TDNRENDRENDSRLRQCRSIVMALKRAEKVVGKGGDTTGEVARVLIEDVHDAIFDLVELIKTFQSKNKLSKLFLSTLFKRR---KDELDAVVDRAITRLQLGLQLQMGHDMGSVKDSMKSXXXXXXXXXXXXXXXXXXXXXXXXXSNAESTTSESV-AEARSIRRKRK---LDQVEIPEDQLFITTD-LLGKGGFGEVYLADYNG-HNAAAKVLYIAHDL---------------------------GALDENQ---------------------------KQRETRQRKGFLRELEAMIRLRSPNTVNVYGAVTSL 876
BLAST of mRNA_L-elsbetiae_contig9337.18336.1 vs. uniprot
Match: A0A6H5K0B7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0B7_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 1.860e-14 Identity = 76/245 (31.02%), Postives = 127/245 (51.84%), Query Frame = 1 Query: 964 LEVAEGVVAGARSLSPLEAFVPGAREALGVVAGLARLAAADHRGDTRDMKLRVRWCRGVVLTLERARKLLGKATAS---DVNPKRLALEAVREPVEGMVEIVQSYKSKHVVSDVFYSSLFRHRHAQAQEALLLAER--HLSALDAKDAED---------------ERETSEVILAKNDG-----------MRRRRQSVLLDLVDIPAASLDVMRDEVLGLGGFGTVYLADLGGGINAAAKIVAFK 1605 LE+A +A A +L+ + F PGAR+ + V + + R RWCR +V TLERA ++LGK + D R+ L+ V++ + +++I++SYKSK+ +S+VF SSL + R +A+ A+ A + H S+++A ++ +R + L+ N +++R +D + I A+ ++ +EVLG GGFGTVYLADL G +N AK+V + Sbjct: 99 LEIATAALASAEALAQ-QPFFPGARKNIVVAV---------------ESEQRARWCRSIVHTLERAGEVLGKKVKTGRGDGQAVRVLLDDVQDSIADLLQIIESYKSKNALSEVFVSSLCKKRQEEAEVAMKTAVQSFHSSSVEAHESLPNVAAATLNTAGLELHQRASKARRLSHNASPASCLQESAMMSKKKRGQHRMDQLQISASDVEGT-NEVLGRGGFGTVYLADLHG-LNTVAKVVVME 325
BLAST of mRNA_L-elsbetiae_contig9337.18336.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 9.920e-14 Identity = 97/346 (28.03%), Postives = 145/346 (41.91%), Query Frame = 1 Query: 1024 VPGAREALGVVAGLARLAAADHRGDTRDMKLRVRWCRGVVLTLERARKLLGKATASDVNPKRLALEAVREPVEGMVEIVQSYKSKHVVSDVFYSSLFRHRHAQAQEALLLAERHLSALDAKDAED----------------------------------------------------ERETSEVILAKNDGMRRRRQSVLLDLVDIPAASLDVMRDEVLGLGGFGTVYLADLGGGINAAAKIVAFKPDRHGRSGGGDDXXXXXXXXXXXXXXXXXQGYQSEEEAEIAADPTDVKARRKAAVAKAKRAAYLKRMLTRDRLAFCRELEAMKRLRGPNTVHTYGAVTSL 1905 VPG EA GV+ +A L D+R + R R++ CR +V+ L+RA K++GK + + R+ +E V + + +VE++++++SK+ +S + S+LF+ R + + +R ++ L + D E TSE + A+ +RR+R+ LD V+IP L + D +LG GGFG VYLAD G NAAAK++ D G E + K+ TR R F RELEAM RLR PNTV+ YGAVTSL Sbjct: 620 VPGISEAAGVLCIMANLF-TDNRENDRANDSRLKQCRSIVMALKRAEKVVGKGSDTTGEVARVLIEDVHDAIFDLVELIKTFQSKNKLSKLLLSTLFKRRQDELD---AVVDRAITRLQLQMGHDMGSVKDSMKSMENXXXXXXXXXXXXXXGMNLYRQASQTISVSVPGCVEGSNAESTTSESV-AEARSIRRQRK---LDQVEIPEDQLFITTD-LLGKGGFGEVYLADYNG-HNAAAKVLYIAHDL---------------------------GALDENQ---------------------------KQRETRQRKGFLRELEAMIRLRSPNTVNVYGAVTSL 901
BLAST of mRNA_L-elsbetiae_contig9337.18336.1 vs. uniprot
Match: D7FL77_ECTSI (Protein tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL77_ECTSI) HSP 1 Score: 58.2 bits (139), Expect = 3.080e-5 Identity = 54/154 (35.06%), Postives = 61/154 (39.61%), Query Frame = 1 Query: 1444 RRRRQSVLLDLVDIPAASLDVMRDEVLGLGGFGTVYLADLGGGINAAAKIVAFKPDRHGRSGGGDDXXXXXXXXXXXXXXXXXQGYQSEEEAEIAADPTDVKARRKAAVAKAKRAAYLKRMLTRDRLAFCRELEAMKRLRGPNTVHTYGAVTSL 1905 RR R+ D V+IP L + DE LG GGFG VYLAD G NAAAK++ D + Q E T R AF RELEAM RLR PNTV+ YGAVTSL Sbjct: 151 RRIRRQRKFDQVEIPEEHLFITNDE-LGKGGFGEVYLADYNG-HNAAAKVLRITHD----------------------LGAFDENQQQRE--------------------------------TSQRRAFLRELEAMIRLRSPNTVNVYGAVTSL 248 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9337.18336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9337.18336.1 >prot_L-elsbetiae_contig9337.18336.1 ID=prot_L-elsbetiae_contig9337.18336.1|Name=mRNA_L-elsbetiae_contig9337.18336.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=637bp GEGGGNGGGGGGVGAALSEQRRRDGRRVALSISGLSPGSPSRSASNIALMback to top mRNA from alignment at L-elsbetiae_contig9337:3744..7658+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9337.18336.1 ID=mRNA_L-elsbetiae_contig9337.18336.1|Name=mRNA_L-elsbetiae_contig9337.18336.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3915bp|location=Sequence derived from alignment at L-elsbetiae_contig9337:3744..7658+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9337:3744..7658+ >mRNA_L-elsbetiae_contig9337.18336.1 ID=mRNA_L-elsbetiae_contig9337.18336.1|Name=mRNA_L-elsbetiae_contig9337.18336.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3822bp|location=Sequence derived from alignment at L-elsbetiae_contig9337:3744..7658+ (Laminarionema elsbetiae ELsaHSoW15)back to top |