mRNA_L-elsbetiae_contig9332.18332.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9332.18332.1
Unique NamemRNA_L-elsbetiae_contig9332.18332.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9332.18332.1 vs. uniprot
Match: Q8QN66_ESV1K (EsV-1-224 n=2 Tax=root TaxID=1 RepID=Q8QN66_ESV1K)

HSP 1 Score: 353 bits (906), Expect = 1.930e-118
Identity = 182/327 (55.66%), Postives = 233/327 (71.25%), Query Frame = 1
Query:    1 MVSWVEKHRPSSLDGVQGNTEVVEALESYRTIKEFPNTILHGPPGSGKTSVILALAKRFFKRENLGAMCIELNAGDFRGIDSIRHRVNNFTNCSSLTEKASGELKLVILDEADGLTICAQRALTHLLDTSGKRARFCLCCNLASKLSSGLKSRCTSFSFAGLGTVALTRTLRNVVDKEGLRLSESGLNAVVDVSLGDARQAINILESLSLGENATSTKTHGDESAVYTACGLPLPSEISNILDALLHRTFGEAYCTLVSLVEHRQLSLSQIITPLVDRVVALGSSDESAMPARRMGRALCILADVEHCLSDGGAEVLAAGGVVAAFH 981
            MVSW EKHRP+ L  V GN  V+ AL+S+ +++  PN ILHGPPGSGKTS I+++AK FF R N+  M +ELNAGD R I ++R +++ FT CSS+T++++  LKLVILDEADGLT CAQRAL HL++T+  RARFCLCCN  S+LSSGL+SRCTSFSF+G+G V L  TLR V  KE L +SE GLNAVV V  GDARQ IN+L+SLSLG+   +T    D+ AVY  CGLP PS+ S I + LL+++F   Y TL S VE  Q SL Q+I PLV+ +++    D   +    +G  L  LADVE CLS+GG+E +A G +V AFH
Sbjct:    1 MVSWTEKHRPTRLQDVSGNDHVIRALQSFTSMETTPNMILHGPPGSGKTSSIISMAKSFFGRTNISIMTLELNAGDSRSIGTMRDQIHFFTRCSSVTDRSTNALKLVILDEADGLTSCAQRALRHLIETTSGRARFCLCCNYISRLSSGLRSRCTSFSFSGIGNVQLAHTLREVARKEDLEISEEGLNAVVKVCAGDARQGINLLQSLSLGD--ATTLVVRDDQAVYATCGLPSPSQTSEIFEVLLNQSFSVGYTTLTSFVELYQFSLLQMIPPLVESIISCSDKD---IGVDTVGEVLSTLADVERCLSNGGSEGIAVGAMVGAFH 322          
BLAST of mRNA_L-elsbetiae_contig9332.18332.1 vs. uniprot
Match: A0A6H5KU33_9PHAE (MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU33_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 9.280e-112
Identity = 181/320 (56.56%), Postives = 236/320 (73.75%), Query Frame = 1
Query:    1 MVSWVEKHRPSSLDGVQGNTEVVEALESYRTIKEFPNTILHGPPGSGKTSVILALAKRFFKRENLGAMCIELNAGDFRGIDSIRHRVNNFTNCSSLTEKASGELKLVILDEADGLTICAQRALTHLLDTSGKRARFCLCCNLASKLSSGLKSRCTSFSFAGLGTVALTRTLRNVVDKEGLRLSESGLNAVVDVSLGDARQAINILESLSLGENATSTKTHGDESAVYTACGLPLPSEISNILDALLHRTFGEAYCTLVSLVEHRQLSLSQIITPLVDRVVALGSSDESAMPARRMGRALCILADVEHCLSDGGAEVLAAG 960
            MVSW EKHRP+ L  V GN +V+ AL+++++++  PN ILHGPPGSGKTS IL++AK FF   N+  M +ELNAGD R I ++R ++N FT CSS+++K++  LKLVILDEADGLT CAQRAL HL++T+  RARFCLCCN  ++LSSGL+SRCTSFSF+G+G V L RTLR V  KE L +SE GLNAVV+V  GDARQ IN+L+SLSLG    +T T  D+ AVYT CGLP PS+ S I D LL+++F   Y TL+SL++  Q SL+Q+I  LV+ +++ G   +  M   R+G  L  LADVE CL+DGG+E +A G
Sbjct:    1 MVSWTEKHRPTRLQDVSGNDQVIRALQTFKSMEATPNLILHGPPGSGKTSSILSMAKSFFGGTNISTMTLELNAGDSRSIGTMRDQINFFTRCSSVSDKSTNALKLVILDEADGLTSCAQRALRHLIETTCGRARFCLCCNYINRLSSGLRSRCTSFSFSGIGNVQLARTLRKVAHKERLEISEEGLNAVVNVCAGDARQGINLLQSLSLGH--ATTLTARDDQAVYTTCGLPSPSQTSEIFDVLLNQSFSVGYTTLMSLIDLCQFSLTQMIPRLVESIISCG---DEKMGVDRVGEVLSTLADVERCLTDGGSEGIAVG 315          
BLAST of mRNA_L-elsbetiae_contig9332.18332.1 vs. uniprot
Match: D8SY80_SELML (AAA domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SY80_SELML)

HSP 1 Score: 208 bits (529), Expect = 1.910e-61
Identity = 120/323 (37.15%), Postives = 186/323 (57.59%), Query Frame = 1
Query:   10 WVEKHRPSSLDGVQGNTEVVEALESYRTIKEFPNTILHGPPGSGKTSVILALAKRFFKRENLGAMCIELNAGDFRGIDSIRHRVNNFTNCSSLTEKASGELKLVILDEADGLTICAQRALTHLLDTSGKRARFCLCCNLASKLSSGLKSRCTSFSFAGLGTVALTRTLRNVVDKEGLRLSESGLNAVVDVSLGDARQAINILESLSLGENATSTKTHGDESAVYTACGLPLPSEISNILDALLHRTFGEAYCTLVSLVEHRQLSLSQIITPLVDRVVALGSSDESAMPARRMGRALCILADVEHCLSDGGAEVLAAGGVVAAF 978
            WVEK+RP+SL  V  + ++++ ++      + P+ +L+GPPG+GKTS ILA+A++ +  +    M +ELNA D RGID +R ++ +F +  S++      +KL+ILDEAD +T  AQ +L  +++   K  RFCL CN  SK+   L+SRCT F F  L    +   L  V+D+E L ++E GL+A+V +S GD R+A+NIL+S  + E       H  E+AVY+  G P P EI  I   LL+ +F  AY  +V L   + L+L  ++  L   +  +      +MP       +  LAD+E+ L+ G  E L  G +V+AF
Sbjct:   11 WVEKYRPASLADVAAHKDIIDTIDRLTAENKLPHLLLYGPPGTGKTSTILAVARKLYGPQ-FQNMILELNASDDRGIDVVRQQIQDFASTQSISFGEKANVKLIILDEADAMTKDAQFSLRRIIEKYTKNTRFCLICNYVSKIIPALQSRCTRFRFPPLQAQHVRERLEFVIDQERLDVTEDGLSAIVRLSNGDMRKALNILQSTQMAE------PHVTEAAVYSCTGNPTPKEIEQIASWLLNESFQSAYSNIVQLKTSKGLALVDVVRELQPFIFTI------SMPGNIRVPLINCLADIEYRLASGPNEKLQLGALVSAF 320          
BLAST of mRNA_L-elsbetiae_contig9332.18332.1 vs. uniprot
Match: A0A8C8VQT1_9SAUR (Replication factor C subunit 5 n=4 Tax=Testudines TaxID=8459 RepID=A0A8C8VQT1_9SAUR)

HSP 1 Score: 204 bits (520), Expect = 5.300e-60
Identity = 124/326 (38.04%), Postives = 194/326 (59.51%), Query Frame = 1
Query:   10 WVEKHRPSSLDGVQGNTEVVEALESYRTIKEFPNTILHGPPGSGKTSVILALAKRFFKRENLGAMCIELNAGDFRGIDSIRHRVNNFTNCSSLTEKASGELKLVILDEADGLTICAQRALTHLLDTSGKRARFCLCCNLASKLSSGLKSRCTSFSFAGLGTVALTRTLRNVVDKEGLRLSESGLNAVVDVSLGDARQAINILESLSLGENATSTKTHGDESAVYTACGLPLPSEISNILDALLHRTFGEAYCTLVSLVEHRQLSLSQIITPL---VDRVVALGSSDESAMPARRMGRALCILADVEHCLSDGGAEVLAAGGVVAAF 978
            WVEK+RP +L+ +  + +++  ++ + +    P+ +L+GPPG+GKTS ILA AK+ +K +   +M +ELNA D RGID +R  + +F +  ++ +K     KLVILDEAD +T  AQ AL  +++   +  RFCL CN  SK+   L+SRCT F FA L    +   L+ V+++E + +SE G+ A+V +S GD R+A+NIL+S ++     +      E +VYT  G PL S+I+NILD +L++ F  AY  +  L   + L+L  I+T +   V RV           P+ RM + L  LAD+EH L+ G +E +    ++AAF
Sbjct:   22 WVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKG---FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFAPLTPELMVPRLQQVIEEEMVDVSEDGMKALVTLSNGDMRRALNILQSTTMAFGKVT------EDSVYTCTGHPLKSDIANILDWMLNQDFTTAYKKITELKMLKGLALHDILTEIHLFVHRV--------DFPPSVRM-QLLIKLADIEHRLAAGTSEKIQLSSLIAAF 329          
BLAST of mRNA_L-elsbetiae_contig9332.18332.1 vs. uniprot
Match: A0A0S7KVW0_9TELE (RFC5 n=6 Tax=Poeciliinae TaxID=586240 RepID=A0A0S7KVW0_9TELE)

HSP 1 Score: 203 bits (517), Expect = 1.290e-59
Identity = 124/328 (37.80%), Postives = 191/328 (58.23%), Query Frame = 1
Query:   10 WVEKHRPSSLDGVQGNTEVVEALESYRTIKEFPNTILHGPPGSGKTSVILALAKRFFKRENLGAMCIELNAGDFRGIDSIRHRVNNFTNCSSLTEKASGELKLVILDEADGLTICAQRALTHLLDTSGKRARFCLCCNLASKLSSGLKSRCTSFSFAGLGTVALTRTLRNVVDKEGLRLSESGLNAVVDVSLGDARQAINILESLSLGENATSTKTHGDESAVYTACGLPLPSEISNILDALLHRTFGEAYCTLVSLVEHRQLSLSQIITP---LVDRVVALGSSDESAMPARRMGRALCILADVEHCLSDGGAEVLAAGGVVAAFHS 984
            WVEK+RP +LD +  + +++  ++ + +  + P+ + +GPPG+GKTS ILA A++ +K +   +M +ELNA D RGID +R  + +F +  ++ +K     KLVILDEAD +T  AQ AL  +++   +  RFCL CN  SK+   L+SRCT F F  L    +   L +V+ KE + +S  G+ A+V++S GD R+++NIL+S S+     +  T      VYT  G PL S+I+NILD  L++ F  AY  ++ L   + L+L  I++    LV RV           PA RMG  L  LAD+E+ L+ G  E +    +VAAF +
Sbjct:   16 WVEKYRPKTLDDLISHKDILSTIQRFISEDKLPHLLFYGPPGTGKTSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKG---FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRLEHVIQKENIDVSPDGMKAIVNLSTGDMRRSLNILQSTSMAYEKVTEHT------VYTCTGHPLRSDIANILDWCLNKDFTSAYKQVLELKTLKGLALHDILSEVHLLVHRV--------DFPPAIRMGL-LIKLADIEYRLAAGTNEKIQLSSMVAAFQA 325          
BLAST of mRNA_L-elsbetiae_contig9332.18332.1 vs. uniprot
Match: A0A452EXR1_CAPHI (Replication factor C subunit 5 n=8 Tax=Artiodactyla TaxID=91561 RepID=A0A452EXR1_CAPHI)

HSP 1 Score: 203 bits (517), Expect = 1.450e-59
Identity = 121/326 (37.12%), Postives = 191/326 (58.59%), Query Frame = 1
Query:   10 WVEKHRPSSLDGVQGNTEVVEALESYRTIKEFPNTILHGPPGSGKTSVILALAKRFFKRENLGAMCIELNAGDFRGIDSIRHRVNNFTNCSSLTEKASGELKLVILDEADGLTICAQRALTHLLDTSGKRARFCLCCNLASKLSSGLKSRCTSFSFAGLGTVALTRTLRNVVDKEGLRLSESGLNAVVDVSLGDARQAINILESLSLGENATSTKTHGDESAVYTACGLPLPSEISNILDALLHRTFGEAYCTLVSLVEHRQLSLSQIITPL---VDRVVALGSSDESAMPARRMGRALCILADVEHCLSDGGAEVLAAGGVVAAF 978
            WVEK+RP +LD +  + +++  ++ + +    P+ +L+GPPG+GKTS ILA AK+ +K +  G+M +ELNA D RGID +R  + +F +  ++ +K     KLVILDEAD +T  AQ AL  +++   +  RFCL CN  SK+   L+SRCT F F  L    +   L +VV++E + +SE G+ A++ +S GD R+A+NIL+S ++     +      E  VYT  G PL S+I++ILD +L++ F  AY  ++ L   + L+L  I+T +   V RV           P+      L  +AD+E+ LS G +E +    ++AAF
Sbjct:   21 WVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKG---FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKALITLSSGDMRRALNILQSTNMAFGKVT------EDTVYTCTGHPLKSDIASILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRV---------DFPSSVRIHLLTKMADIEYRLSVGTSEKIQLSSLIAAF 328          
BLAST of mRNA_L-elsbetiae_contig9332.18332.1 vs. uniprot
Match: H0W0V2_CAVPO (Replication factor C subunit 5 n=12 Tax=Boreoeutheria TaxID=1437010 RepID=H0W0V2_CAVPO)

HSP 1 Score: 203 bits (516), Expect = 2.100e-59
Identity = 122/326 (37.42%), Postives = 191/326 (58.59%), Query Frame = 1
Query:   10 WVEKHRPSSLDGVQGNTEVVEALESYRTIKEFPNTILHGPPGSGKTSVILALAKRFFKRENLGAMCIELNAGDFRGIDSIRHRVNNFTNCSSLTEKASGELKLVILDEADGLTICAQRALTHLLDTSGKRARFCLCCNLASKLSSGLKSRCTSFSFAGLGTVALTRTLRNVVDKEGLRLSESGLNAVVDVSLGDARQAINILESLSLGENATSTKTHGDESAVYTACGLPLPSEISNILDALLHRTFGEAYCTLVSLVEHRQLSLSQIITPL---VDRVVALGSSDESAMPARRMGRALCILADVEHCLSDGGAEVLAAGGVVAAF 978
            WVEK+RP +L+ +  + +++  ++ + +    P+ +L+GPPG+GKTS ILA AK+ +K +  G+M +ELNA D RGID +R  + +F +  ++ +K     KLVILDEAD +T  AQ AL  +++   +  RFCL CN  SK+   L+SRCT F F  L    +   L +VV +E + +SE G+ A+V +S GD R+A+NIL+S ++     + +T      VYT  G PL S+I+NILD +L++ F  AY  ++ L   + L+L  I+T +   V RV           P+      L  +AD+E+ LS G +E +    ++AAF
Sbjct:   22 WVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKG---FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVKEEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEET------VYTCTGHPLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRV---------DFPSSVRIHLLTKMADIEYRLSVGTSEKIQLSSLIAAF 329          
BLAST of mRNA_L-elsbetiae_contig9332.18332.1 vs. uniprot
Match: A0A1G4ML00_LACFM (LAFE_0H16622g1_1 n=1 Tax=Lachancea fermentati TaxID=4955 RepID=A0A1G4ML00_LACFM)

HSP 1 Score: 202 bits (515), Expect = 2.120e-59
Identity = 118/326 (36.20%), Postives = 184/326 (56.44%), Query Frame = 1
Query:   10 WVEKHRPSSLDGVQGNTEVVEALESYRTIKEFPNTILHGPPGSGKTSVILALAKRFFKRENLGAMCIELNAGDFRGIDSIRHRVNNFTNCSSLTEKASGELKLVILDEADGLTICAQRALTHLLDTSGKRARFCLCCNLASKLSSGLKSRCTSFSFAGLGTVALTRTLRNVVDKEGLRLSESGLNAVVDVSLGDARQAINILESLSLGENATSTKTHGDESAVYTACGLPLPSEISNILDALLHRTFGEAYCTLVSLVEHRQLSLSQIITPLVDRVVALGSSDESAMPARRMGRALCILADVEHCLSDGGAEVLAAGGVVAAFHSS 987
            W+EK+RP +LD V G TE+VE +  +      P+ + +GPPG+GKTS I+ALA+  + + N   M +ELNA D RGID +R+++  F +   +  K     KL+ILDEAD +T  AQ AL  +++   K  RFC+  N A KL+  L SRCT F F  L   A+ + + NV+ KEGL+LS   L A++ +S GD R+A+N+L++     +  S +    E+ +Y   G P P EI   L+++L   +G A+ T+  +   + L+L  +I  +++ +      D    P  R  + LC LADVE+ +S GG + +    V+    +S
Sbjct:   10 WIEKYRPETLDDVYGQTEIVETVRKFVKEGRLPHLLFYGPPGTGKTSTIVALAREIYGK-NYRNMVLELNASDDRGIDVVRNQIKEFASTRQIFSKG---FKLIILDEADSMTNAAQNALRRIIEKYTKNTRFCILANYAHKLTPALLSRCTRFRFQPLPAAAIEKRVTNVLIKEGLKLSPEALKALLKLSKGDMRRALNVLQASKATLDDPSEEV--TENTIYECIGAPHPQEIETALESMLKDDWGTAFYTVNKIRTSKGLALIDMIEGMIEVL-----EDYELKPETRT-QLLCKLADVEYAISKGGNDKIQNSAVIGVIKTS 323          
BLAST of mRNA_L-elsbetiae_contig9332.18332.1 vs. uniprot
Match: A0A4X2K7A9_VOMUR (Replication factor C subunit 5 n=5 Tax=Metatheria TaxID=9263 RepID=A0A4X2K7A9_VOMUR)

HSP 1 Score: 203 bits (516), Expect = 2.280e-59
Identity = 121/326 (37.12%), Postives = 193/326 (59.20%), Query Frame = 1
Query:   10 WVEKHRPSSLDGVQGNTEVVEALESYRTIKEFPNTILHGPPGSGKTSVILALAKRFFKRENLGAMCIELNAGDFRGIDSIRHRVNNFTNCSSLTEKASGELKLVILDEADGLTICAQRALTHLLDTSGKRARFCLCCNLASKLSSGLKSRCTSFSFAGLGTVALTRTLRNVVDKEGLRLSESGLNAVVDVSLGDARQAINILESLSLGENATSTKTHGDESAVYTACGLPLPSEISNILDALLHRTFGEAYCTLVSLVEHRQLSLSQIITPL---VDRVVALGSSDESAMPARRMGRALCILADVEHCLSDGGAEVLAAGGVVAAF 978
            WVEK+RP +L+ +  + +++  ++ + +    P+ +L+GPPG+GKTS ILA AK+ ++ +   +M +ELNA D RGID +R  + +F +  ++ +K     KLVILDEAD +T  AQ AL  +++   +  RFCL CN  SK+   L+SRCT F F  L    +   L +V+++E + +SE G+ A+V +S GD R+A+NIL+S ++     + +T      VYT  G PL S+I+NILD +L++ F  AY  ++ L   + L+L  I+T +   V RV           PA R+   L  +AD+EH L+ G +E +    ++AAF
Sbjct:   25 WVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYGPPGTGKTSTILACAKQLYRDKEFNSMVLELNASDDRGIDIVRGPILSFASTRTIFKKG---FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVIEEENVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEET------VYTCTGHPLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRV--------DFPPAVRI-HLLIKMADIEHRLAVGTSEKIQLSSLIAAF 332          
BLAST of mRNA_L-elsbetiae_contig9332.18332.1 vs. uniprot
Match: A0A8C6QAG3_NANGA (Replication factor C subunit 5 n=1 Tax=Nannospalax galili TaxID=1026970 RepID=A0A8C6QAG3_NANGA)

HSP 1 Score: 202 bits (515), Expect = 2.800e-59
Identity = 121/326 (37.12%), Postives = 192/326 (58.90%), Query Frame = 1
Query:   10 WVEKHRPSSLDGVQGNTEVVEALESYRTIKEFPNTILHGPPGSGKTSVILALAKRFFKRENLGAMCIELNAGDFRGIDSIRHRVNNFTNCSSLTEKASGELKLVILDEADGLTICAQRALTHLLDTSGKRARFCLCCNLASKLSSGLKSRCTSFSFAGLGTVALTRTLRNVVDKEGLRLSESGLNAVVDVSLGDARQAINILESLSLGENATSTKTHGDESAVYTACGLPLPSEISNILDALLHRTFGEAYCTLVSLVEHRQLSLSQIITPL---VDRVVALGSSDESAMPARRMGRALCILADVEHCLSDGGAEVLAAGGVVAAF 978
            WVEK+RP +L+ +  + +++  ++ + +    P+ +L+GPPG+GKTS ILA AK+ ++ + LG+M +ELNA D RGID +R  + +F +  ++ +K     KLVILDEAD +T  AQ AL  +++   +  RFCL CN  SK+   L+SRCT F F  L    +   L +VV++E + +SE G+ A+V +S GD R+A+NIL+S ++     +      E +VYT  G PL ++I+NILD +L++ F  AY  ++ L   + L+L  I+T +   V RV           P+      L  +AD+E+ LS G  E +    ++AAF
Sbjct:   20 WVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYGPPGTGKTSTILACAKQLYREKELGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKG---FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKALVTLSNGDMRRALNILQSTNMAFGKVT------EESVYTCTGHPLKTDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRV---------DFPSSVRIHLLTKMADIEYRLSVGTNEKIQLSSLIAAF 327          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9332.18332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QN66_ESV1K1.930e-11855.66EsV-1-224 n=2 Tax=root TaxID=1 RepID=Q8QN66_ESV1K[more]
A0A6H5KU33_9PHAE9.280e-11256.56MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8SY80_SELML1.910e-6137.15AAA domain-containing protein n=3 Tax=Selaginella ... [more]
A0A8C8VQT1_9SAUR5.300e-6038.04Replication factor C subunit 5 n=4 Tax=Testudines ... [more]
A0A0S7KVW0_9TELE1.290e-5937.80RFC5 n=6 Tax=Poeciliinae TaxID=586240 RepID=A0A0S7... [more]
A0A452EXR1_CAPHI1.450e-5937.12Replication factor C subunit 5 n=8 Tax=Artiodactyl... [more]
H0W0V2_CAVPO2.100e-5937.42Replication factor C subunit 5 n=12 Tax=Boreoeuthe... [more]
A0A1G4ML00_LACFM2.120e-5936.20LAFE_0H16622g1_1 n=1 Tax=Lachancea fermentati TaxI... [more]
A0A4X2K7A9_VOMUR2.280e-5937.12Replication factor C subunit 5 n=5 Tax=Metatheria ... [more]
A0A8C6QAG3_NANGA2.800e-5937.12Replication factor C subunit 5 n=1 Tax=Nannospalax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9332contigL-elsbetiae_contig9332:1467..2456 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score360.5
Seed ortholog evalue8.2e-97
Seed eggNOG ortholog2880.D8LP38
KEGG koko:K10756
KEGG Pathwayko03030,ko03420,ko03430,map03030,map03420,map03430
KEGG ModuleM00289,M00295
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DNA replication
EggNOG OGsCOG0470@1,KOG0990@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032,ko03036,ko03400
Exons1
Model size990
Cds size990
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817003.0034862-CDS-L-elsbetiae_contig9332:1466..24561622817003.0034862-CDS-L-elsbetiae_contig9332:1466..2456Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9332 1467..2456 -
1691683975.1820467-CDS-L-elsbetiae_contig9332:1466..24561691683975.1820467-CDS-L-elsbetiae_contig9332:1466..2456Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9332 1467..2456 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9332.18332.1prot_L-elsbetiae_contig9332.18332.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9332 1467..2456 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9332.18332.1

>prot_L-elsbetiae_contig9332.18332.1 ID=prot_L-elsbetiae_contig9332.18332.1|Name=mRNA_L-elsbetiae_contig9332.18332.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=330bp
MVSWVEKHRPSSLDGVQGNTEVVEALESYRTIKEFPNTILHGPPGSGKTS
VILALAKRFFKRENLGAMCIELNAGDFRGIDSIRHRVNNFTNCSSLTEKA
SGELKLVILDEADGLTICAQRALTHLLDTSGKRARFCLCCNLASKLSSGL
KSRCTSFSFAGLGTVALTRTLRNVVDKEGLRLSESGLNAVVDVSLGDARQ
AINILESLSLGENATSTKTHGDESAVYTACGLPLPSEISNILDALLHRTF
GEAYCTLVSLVEHRQLSLSQIITPLVDRVVALGSSDESAMPARRMGRALC
ILADVEHCLSDGGAEVLAAGGVVAAFHSS*
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mRNA from alignment at L-elsbetiae_contig9332:1467..2456-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9332.18332.1 ID=mRNA_L-elsbetiae_contig9332.18332.1|Name=mRNA_L-elsbetiae_contig9332.18332.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=990bp|location=Sequence derived from alignment at L-elsbetiae_contig9332:1467..2456- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGTCATGGGTCGAAAAGCATCGTCCTTCGAGCCTGGACGGTGTCCA AGGCAACACAGAGGTGGTCGAGGCACTCGAGTCGTACCGAACAATAAAGG AATTTCCCAACACCATCCTCCACGGCCCCCCCGGGAGCGGGAAGACCTCT GTGATTTTGGCACTTGCGAAAAGGTTCTTCAAGAGAGAAAACTTGGGAGC GATGTGCATCGAGCTCAACGCGGGTGATTTTCGTGGAATCGACAGTATAC GGCACAGGGTAAATAATTTCACCAATTGTTCATCTCTGACAGAGAAAGCT TCCGGAGAACTAAAACTCGTCATCCTGGATGAAGCGGATGGGCTAACCAT CTGCGCCCAGCGCGCTCTGACACACCTGTTGGACACGTCCGGTAAGCGGG CGCGATTCTGTCTGTGCTGCAATCTGGCCAGCAAGCTGTCGAGCGGGCTA AAATCAAGGTGTACATCTTTCAGTTTCGCTGGTTTAGGGACAGTGGCGCT CACGCGCACTCTCCGAAACGTCGTGGACAAGGAGGGGTTACGATTGTCCG AGTCTGGGCTAAACGCCGTCGTGGACGTGAGCCTGGGTGATGCCCGTCAA GCCATAAATATTCTCGAAAGCCTCAGCCTTGGCGAAAATGCCACTAGCAC CAAGACCCATGGAGACGAGTCAGCCGTGTACACAGCCTGTGGACTTCCAC TGCCGTCTGAAATAAGCAACATATTAGATGCACTGTTGCACCGGACATTT GGGGAAGCGTATTGTACACTGGTCTCTCTGGTTGAGCACAGGCAGCTGTC TCTCTCCCAGATAATTACGCCTCTCGTAGATCGCGTGGTCGCACTGGGTT CCTCGGACGAGAGCGCGATGCCCGCGCGTAGAATGGGGCGCGCTCTGTGC ATTCTCGCCGACGTAGAACACTGTCTGTCGGACGGAGGGGCGGAAGTACT GGCCGCGGGGGGCGTGGTCGCTGCTTTCCATTCTTCTTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9332:1467..2456-

>mRNA_L-elsbetiae_contig9332.18332.1 ID=mRNA_L-elsbetiae_contig9332.18332.1|Name=mRNA_L-elsbetiae_contig9332.18332.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1980bp|location=Sequence derived from alignment at L-elsbetiae_contig9332:1467..2456- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGTCATGGGTCGAAAAGCATCGTCCTTCGAGCCTGGACGGTGTCCA
AGGCAACACAGAGGTGGTCGAGGCACTCGAGTCGTACCGAACAATAAAGG
AATTTCCCAACACCATCCTCCACGGCCCCCCCGGGAGCGGGAAGACCTCT
GTGATTTTGGCACTTGCGAAAAGGTTCTTCAAGAGAGAAAACTTGGGAGC
GATGTGCATCGAGCTCAACGCGGGTGATTTTCGTGGAATCGACAGTATAC
GGCACAGGGTAAATAATTTCACCAATTGTTCATCTCTGACAGAGAAAGCT
TCCGGAGAACTAAAACTCGTCATCCTGGATGAAGCGGATGGGCTAACCAT
CTGCGCCCAGCGCGCTCTGACACACCTGTTGGACACGTCCGGTAAGCGGG
CGCGATTCTGTCTGTGCTGCAATCTGGCCAGCAAGCTGTCGAGCGGGCTA
AAATCAAGGTGTACATCTTTCAGTTTCGCTGGTTTAGGGACAGTGGCGCT
CACGCGCACTCTCCGAAACGTCGTGGACAAGGAGGGGTTACGATTGTCCG
AGTCTGGGCTAAACGCCGTCGTGGACGTGAGCCTGGGTGATGCCCGTCAA
GCCATAAATATTCTCGAAAGCCTCAGCCTTGGCGAAAATGCCACTAGCAC
CAAGACCCATGGAGACGAGTCAGCCGTGTACACAGCCTGTGGACTTCCAC
TGCCGTCTGAAATAAGCAACATATTAGATGCACTGTTGCACCGGACATTT
GGGGAAGCGTATTGTACACTGGTCTCTCTGGTTGAGCACAGGCAGCTGTC
TCTCTCCCAGATAATTACGCCTCTCGTAGATCGCGTGGTCGCACTGGGTT
CCTCGGACGAGAGCGCGATGCCCGCGCGTAGAATGGGGCGCGCTCTGTGC
ATTCTCGCCGACGTAGAACACTGTCTGTCGGACGGAGGGGCGGAAGTACT
GGCCGCGGGGGGCGTGGTCGCTGCTTTCCATTCTTCTTAAATGGTGTCAT
GGGTCGAAAAGCATCGTCCTTCGAGCCTGGACGGTGTCCAAGGCAACACA
GAGGTGGTCGAGGCACTCGAGTCGTACCGAACAATAAAGGAATTTCCCAA
CACCATCCTCCACGGCCCCCCCGGGAGCGGGAAGACCTCTGTGATTTTGG
CACTTGCGAAAAGGTTCTTCAAGAGAGAAAACTTGGGAGCGATGTGCATC
GAGCTCAACGCGGGTGATTTTCGTGGAATCGACAGTATACGGCACAGGGT
AAATAATTTCACCAATTGTTCATCTCTGACAGAGAAAGCTTCCGGAGAAC
TAAAACTCGTCATCCTGGATGAAGCGGATGGGCTAACCATCTGCGCCCAG
CGCGCTCTGACACACCTGTTGGACACGTCCGGTAAGCGGGCGCGATTCTG
TCTGTGCTGCAATCTGGCCAGCAAGCTGTCGAGCGGGCTAAAATCAAGGT
GTACATCTTTCAGTTTCGCTGGTTTAGGGACAGTGGCGCTCACGCGCACT
CTCCGAAACGTCGTGGACAAGGAGGGGTTACGATTGTCCGAGTCTGGGCT
AAACGCCGTCGTGGACGTGAGCCTGGGTGATGCCCGTCAAGCCATAAATA
TTCTCGAAAGCCTCAGCCTTGGCGAAAATGCCACTAGCACCAAGACCCAT
GGAGACGAGTCAGCCGTGTACACAGCCTGTGGACTTCCACTGCCGTCTGA
AATAAGCAACATATTAGATGCACTGTTGCACCGGACATTTGGGGAAGCGT
ATTGTACACTGGTCTCTCTGGTTGAGCACAGGCAGCTGTCTCTCTCCCAG
ATAATTACGCCTCTCGTAGATCGCGTGGTCGCACTGGGTTCCTCGGACGA
GAGCGCGATGCCCGCGCGTAGAATGGGGCGCGCTCTGTGCATTCTCGCCG
ACGTAGAACACTGTCTGTCGGACGGAGGGGCGGAAGTACTGGCCGCGGGG
GGCGTGGTCGCTGCTTTCCATTCTTCTTAA
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