mRNA_L-elsbetiae_contig9314.18318.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9314.18318.1
Unique NamemRNA_L-elsbetiae_contig9314.18318.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9314.18318.1 vs. uniprot
Match: A0A6H5JT57_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT57_9PHAE)

HSP 1 Score: 1009 bits (2609), Expect = 0.000e+0
Identity = 574/1008 (56.94%), Postives = 705/1008 (69.94%), Query Frame = 1
Query:  652 MDETPGSYQELATFLSRTIFSQIASPDDVGHAVRGDAEPTGANSDHVPPP-QDPLERPATECIAVPPPSACCPPPGVEPDVAAEHKYLGELHADLANITTKANVHACTFTCHKRGSADSCRFNFGKDGKPLVDRTSVQRGFRTIFPNGESLVGDVLYPASDCAEAVAAASAAEELEKQERLQSDSDAAEVSSGNVDFATVAERFTSKHRREQPMVNSYNPIIQYCTRSNMDIRPLLRDSDARGALFYLMSYFSKTESTMDALLNILAPVVERIKDETNGAAEKVIAAALVRSCSCKTVAHMTLGGPAAASKVLGYSDSKSSSDAVDCAVWPLLKEASAAFGNPASPPASAGNADDEEQGAQPDNHDHSDDDHDAGSDVFISGATGKLRVSTCMHHLYYRRCDKDDTDHPYYNMCFVVWTPIVRVE-TPKAGAKASKTTSADELDDGMDDEEPDGEDIENCNDTSAPAAAAKKPGRKLSDRHEFVGLPKMKKQQATREKSVLVNIKRDFPRQDTRPEQYAQLMLCLFKPLFAIDDLRLPEETSYSDALQRTEDSNEWDPASFSMRSNIRAMLTQRLAADEETARRRAELLAARER---GEAGAYEVNGDVFNLACDDDDTTGTNVLPTATNAHRVSAYVNDALDSVRAAGFSFDDSPSTCDTPGLPPPSLLSGRTHDQVQADRAEVRLGQDEIEAQKFMSDFAAKLAKADTTACAAPPEEPP-VHDADSYNPATMEPYIRDLRSKSQSGLAEEAKNKMNERRRATNERVAATDVGRASVYQHDAINRIAEEFGLNRKQRLAFFIFGNAWMARNGSPNPNALRLHVSGGAGSGKSYVLAAINSLIECPALKGVVQPGGLLTVAFQGKQAASVGGSTVHSVCDIGTRQK-GTMDKTDGQAGLSANKTQRWAQLMDGAIAMEEVSMISCKLLGKMHEAAVSVRPSGASLPHAGYICVTFGDLNQLEPVGALSVSHGAADSTRLDGLSNTQRVGRANFMAANASVVLDETNNR 3654
            MD+TP SYQELA+FLSRTIFSQ+AS +DV HA+ G  EP+ A  D  PPP +DPL+RPATE IA+PPPSAC PPPGVE DVAA+ +YLG L A+LA IT  AN+H CT+TCHK G A+SCRF FGKDGKPL  RT VQRGFR I+PNG+S+VG VLY AS   +A+AAA AA   E++E  +   ++ +VS G +DFATVAERFT+KHRRE   VNSYN II +CTRSNMDI+ LLRDSDARGALFY+++Y +KTE+TMDALLN+LAPVVERIKDE  GA   V AA LVR+CSCKTVAHM +G PAAASKVLGY+D+KS+ DA  C + PLL  ASA+F   A PPA   N    E               D  S   ++ + GK+R+S  +H LY RRC  +DT+HPY+ MC+ VW  +VR+E TP+    A +    ++ + G                     AA +K GR L+ RH+FVGLP + KQQ TRE+ +L+NI RD P+QDT+PE +AQL+LCL+KP F I DLRLP+E S++ AL+RTE+S  WD  S SMR NI+ ML QR AADEE  R  + L + R R   G  G  +++GD+F    DD D  G NV+P A NAHRVSAYVN+A+D    AGFS  D+        LP  +LLSGR+  Q+ AD ++  L                 L   +T A  A P++ P V     YN   + PY+RDLRSKS++GL+++AK++M+ RR+ TNE VA TDVGR+S  QHDA+ RIA+EFGLNRKQRLAFFIFG AW+AR+G P PNALRLHVSGGAGSGKSYVL AI +LI+CPALKGVVQPGGLLTVAFQGK AA+VGG+TVHSV D+  +   G MD T GQ GLS  K  RW      A+A+EEVSM+SC  LG +H+AAVSVRPS ASLP AG I VTFGDLNQL PV A SV  GA DS+ L  +++T+R+G +NF AANA+VVLDETNNR
Sbjct:    1 MDKTPDSYQELASFLSRTIFSQVASDEDVQHAMTGGIEPSNAPEDGTPPPSRDPLKRPATETIAMPPPSACFPPPGVERDVAADEQYLGPLRAELAEITKAANMHQCTYTCHKHGHANSCRFGFGKDGKPLESRTCVQRGFRQIYPNGDSVVGGVLYSASQSRDAIAAADAAAAKEEEEIQKFADESDDVSRGKLDFATVAERFTAKHRREHRKVNSYNLIIAFCTRSNMDIKALLRDSDARGALFYILNYSTKTETTMDALLNVLAPVVERIKDEAEGAPAAVTAAQLVRACSCKTVAHMPVGAPAAASKVLGYTDAKSAPDARTCPMKPLLALASASFD--ALPPAEGSN----ENADXXXXXXXXXXXXDYHSGAILNTSGGKIRISISLHELYLRRCLPNDTEHPYHGMCYAVWARLVRIENTPRKQKPARRPNDDNDRESGX-------XXXXXXXXXXXXXAARRKRGRPLAKRHDFVGLPTVHKQQVTREEPILINIMRDVPKQDTQPENHAQLLLCLYKPFFKIHDLRLPDEASWAVALRRTEESGLWDQRSTSMRINIKGMLRQRHAADEEN-RASSVLQSLRRRRPLGACGGADIDGDIFGADVDDTDPAGPNVMPPARNAHRVSAYVNNAVDRCLDAGFSRTDNDR------LPQAALLSGRSSHQIAADASKDAL-----------------LKTRETEAATAVPDDAPDVAATKPYNADALSPYLRDLRSKSEAGLSKDAKDRMDRRRKETNEAVAKTDVGRSSPQQHDAVRRIADEFGLNRKQRLAFFIFGAAWIARDGVPTPNALRLHVSGGAGSGKSYVLRAIVALIDCPALKGVVQPGGLLTVAFQGKAAANVGGNTVHSVADVPRKNNDGAMDNTIGQTGLSEAKAARWTHA--AALAIEEVSMVSCLQLGSLHKAAVSVRPSSASLPFAGMIYVTFGDLNQLAPVSAKSVVFGATDSSELHKMTHTERIGHSNFWAANAAVVLDETNNR 969          
BLAST of mRNA_L-elsbetiae_contig9314.18318.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)

HSP 1 Score: 701 bits (1809), Expect = 3.460e-220
Identity = 455/1121 (40.59%), Postives = 626/1121 (55.84%), Query Frame = 1
Query:  343 ISTKLGGVDLDVCSRLKGDLPSYVERLQRISDDPVASADFFHITIDAVMTALLRYKATDSDGGALGRVKAFVGMTEEQKRLTLHCHLLIWSVGYNDFSSLRTAMDETPGSYQELATFLSRTIFSQIASPDDVGHAVRGDAE-----PTGANSDHVPPPQDPLERPATECIAVPPPSACCPPPGVEPDVAAEHKYLGELHADLANITTKANVHACTFTCHKRGSADSCRFNFGKDGKPLVDRTSVQRGFRTIFPNGESLVGDVLYPASDCAEAVAAASAAEELEKQERLQSDSDAAEVSSGNVDFATVAERFTSKHRREQPMVNSYNPIIQYCTRSNMDIRPLLRDSDARGALFYLMSYFSKTESTMDALLNILAPVVERIKDETNGAAEKVIAAALVRSCSCKTVAHMTLGGPAAASKVLGYSDSKSSSDAVDCAVWPLLKEASAAFGNPASPPASAGNADDEEQGAQPDNHDHSDDDHDAGSDVFISGATGKLRVSTCMHHLYYRRCDKDDTDHPYYNMCFVVWTPIVRV----ETPKAGAKASKTTSADELDDGMDDEEPDGEDIENCNDTSAPAA--AAKKPGRKLSDRHEFVGLPKMKKQQATREKSVLVNIKRDFPRQDTRPEQYAQLMLCLFKPLFAIDDLRLPEETSYSDALQRTEDSNEWDPASFSMRSNIRAMLTQRLAADEETARRRAELLAARERGEAGAYEVNGDVFNL-ACD-DDDTTGTNVLPTATNAHRVSAYVNDALDSVRAAGFSFDDSPSTCDTPGLPPPSLLSGRTHDQVQADRAEVRLGQDEIEAQKFMSDFAAKLAKADTTACAAPPEEPPVHDADSYNPAT-----MEPYIRDLRSKSQSGLAEEAKNKMNERRRATNERVAATDVGRASVYQHDAINRIAEEFGLNRKQRLAFFIFGNAWMARNGSPNPNALRLHVSGGAGSGKSYVLAAINSLIECPALKGVVQPGGLLTVAFQGKQAASVGGSTVHSVCDIGTRQKGTMDKT-DGQAGLSANKTQRWAQLMDGAIAMEEVSMISCKLLGKMHEAAVSVRPSGASLPHAGYICVTFGDLNQLEPVGALSVSHGAADSTRLDGLSNTQRVGRANFMAANASVVLDETN 3648
            I  K+ GVD+DV S+LK + P YV++L+ +++DPVASADFFH TID V++ LLR+ A+D DGG LGRVK +VGMTEEQKRL LHCHLL+W  GYNDF+S R  MD TP  Y ELA +L   IF+Q+A+  D+   + G  E     P G          DP  R A EC+   PP+ C P  G +     +  Y   ++ DLA IT  AN+H C  TC K    +SCRF +G++GKPLV  T V+RG       G  ++  V+Y      +A AAAS         +   D   A +   +     +++RF++  RR    +NS+NP+IQ+  RSNMD++ LLRDSDA+G LFY+++Y +KTE T+D LL +L PVVERI+DE +   +K +A  LVRSC CK ++ + +GGPAAASKVL   D K S   V C + PLL  A +  G     P     +       +PD+            DV I+   GKL V+   + LY  RC  DDT H  + M +V W  +VRV             ++++ A + D   D  +P         D  +P+   A+ + GR  + R++FVG  K K QQ  REK  +VNI RD PR+DT+P  + +L+LC++ P F +DDL+                                 ML Q+LAA EETA+R A+   A         + N D   +  CD  DD  G +V+PT+    +   +VNDAL S  AAGFS DDS      P      LLSGRT  Q   D + + LG D   +  F++   + L +  T+  A+  ++     + SY+  T     ++PY+  LR+ SQ GL+++A+ + + RR ATN  VA TDVGR S  QH     IA+EFGLNR+QRLAFFIF N  +A++    P ALR+++ GGAG+GKS+VL AI + IECPA+   V  G LLTVA+QGKQAASVGG+TVHSVC  G+R  G +    D Q+ L   K   W  +    +A+EEVSM+ C LL ++H+AA S+ P   + P    + V  GD +QL PV A S++ GA  STR   ++ T+R G   F +ANA V+LDE+N
Sbjct:  663 IVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATLADITRVMHGGVEGISTLPVGDTCQ-----TDPNHRHAKECLPTAPPTNCFPRDGEDRCPVHDQDYARLMYLDLAGITPGANLHKCNATCTKYNHLNSCRFGYGEEGKPLVAETVVKRGRCVFDTKGNMIIDGVVYSVHSTDDAAAAAST-----PAFQTAFDESIATLIGDDGLPDPLSDRFSADIRRLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRDEADRVDDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVPCPMSPLLTWACSRDG-----PLDGDTS-------RPDDXXXXXXXXXXXXDVIITPFKGKLTVAQRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVIRYDPLDNRQPDLAQSSDASDTDSDCDTVQP--------GDPVSPSGRRASARTGRPRACRYDFVGEYKHKWQQVLREKPAMVNIMRDIPRKDTQPVAHCRLLLCMYIPFFTLDDLKTT------------------------------GMLAQKLAAAEETAKREAQN--ASFTASPDKQQDNSDKAEVHLCDYGDDEPGRSVIPTSARRLQTEFFVNDALRSFLAAGFSGDDSLPESAFP------LLSGRTRQQTMEDASHITLGTDVAASTLFVARQESSLQQKSTSCAASMADDAQPVSSPSYSTGTDGGPPVQPYLIRLRAASQEGLSDQARGERDARRVATNAAVAQTDVGRTSNLQHSVAVSIAQEFGLNRRQRLAFFIFANGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAIAAEVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHDDQSSLPDAKAMHWKGV--SVLAIEEVSMVGCNLLVQLHKAACSMFPIHKAKPFGNRVVVMLGDFHQLSPVKAKSLACGAGVSTRRRDMTVTERYGADLFRSANACVMLDESN 1713          
BLAST of mRNA_L-elsbetiae_contig9314.18318.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE)

HSP 1 Score: 657 bits (1696), Expect = 1.190e-208
Identity = 407/967 (42.09%), Postives = 556/967 (57.50%), Query Frame = 1
Query:  355 LGGVDLDVCSRLKGDLPSYVERLQRISDDPVASADFFHITIDAVMTALLRYKATDSDGGALGRVKAFVGMTEEQKRLTLHCHLLIWSVGYNDFSSLRTAMDETPGSYQELATFLSRTIFSQIASPDDVGHAVRGDAEPTGANSDHVPPPQDPLERPATECIAVPPPSACCPPPGVEPDVAAEHKYLGELHADLANITTKANVHACTFTCHKRGSADSCRFNFGKDGKPLVDRTSVQRGFRTIFPNGESLVGDVLYPASDCAEAVAAASAAEELEKQERLQSDSDAAEVSSGNVDFATVAERFTSKHRREQPMVNSYNPIIQYCTRSNMDIRPLLRDSDARGALFYLMSYFSKTESTMDALLNILAPVVERIKDETNGAAEKVIAAALVRSCSCKTVAHMTLGGPAAASKVLGYSDSKSSSDAVDCAVWPLLKEASAAFGNPASPPASAGNADDEEQGAQPDNHDHSDDDHDAGSDVFISGATGKLRVSTCMHHLYYRRCDKDDTDHPYYNMCFVVWTPIVRVET--PKAGAKASKTTSADELDDGMDDEEPDGEDIENCNDTSAPAAAAKKP--GRKLSDRHEFVGLPKMKKQQATREKSVLVNIKRDFPRQDTRPEQYAQLMLCLFKPLFAIDDLRLPEETSYSDALQRTEDSNEWDPASFSMRSNIRAMLTQRLAADEETARRRAELLAARERGEAGAYEVNGDVFNLACDDDDTTGTNVLPTATNAHRVSAYVNDALDSVRAAGFSFDDSPSTCDTPGLPPPSLLSGRTHDQVQADRAEVRLGQDEIEAQKFMSDFAAKLAKADTTACAAPPEEPPVHDADSYNPATMEPYIRDLRSKSQSGLAEEAKNKMNERRRATNERVAATDVGRASVYQHDAINRIAEEFGLNRKQRLAFFIFGNAWMARNGSPNPNALRLHVSGGAGSGKSYVLAAINSLIECPALKGVVQPGGLLTVAFQGKQAASV 3243
            L GV+LDV SRLK D P+Y ++L+ +++DPVASADFFH TIDAV+T LLR+ A D DGG LGRVK +VGMTEEQKRLTLHCHLL+W  GYNDF+S R  MD+TP  Y ELA +L + IF+QIA+  D+ H +RG        +D   PP D L RPA E +AVPPPS+C P  G   +   + KY   ++ DLA +T  AN+H C  TC K    DSCRF FG  GKPLV +T VQRG      +G   +  ++Y  S   +A AAAS      +  R   D+  A + + N     +++RFT++ RR    +NS+NP+IQ+  RSNMD++ LLRDSDA+G LFY+++Y +KTE T+D LL +LAPV ERI+++++GA EK +A  LVRSC CK ++ +++GGPAAASKV    D + S   V C++ PLL  A++  G            D E       +     +D D    + I+   GKL V+  ++ LY +RCD +DT +P + M +VVW  +VR+E   P     A    S D+ +   DD       I           A ++P  GR  ++R  FVG  K K  Q  REK+ +VNI RD PR DT+P  +A+L+LC+F P F +DDL+L  E S++ A+ R + SN WDP S  +R NI+ ML QRLAADEETA+R+AE  A  E  +    + +G++        D   T+V+P +    +   +V DAL S  A                   P   S       Q    E ++G         +S     + +  T + A            S N   + PY+  LR  + +GL+ EA+ + N +R  TN  VA TDVG  +  QH     IA+EFGLNRKQRLAF+IF N  +A+N    P ALRL++ GGAG+GKS+VL A+ + I+CP L G + PG LLTVAFQGK A++V
Sbjct:  666 LAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRGVQPSPEVETDAPAPPPDQLMRPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAAS-----NEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISHPTVPCSMSPLLTWATSRDGP----------LDGEVDRVDDSSDXXXXNDSDVEESIIITPFKGKLTVAQRVYLLYLKRCDPNDTTNPVHGMSYVVWHKLVRLERCLPGRNHPAPTDRSDDDSESSGDDXPXXXXXIGXXXXXXXDVPATRRPARGRPRANRLRFVGDFKNKWHQVMREKTAMVNIMRDIPRADTQPVAHARLLLCMFVPFFNLDDLKLNGE-SWTQAMARIDASNSWDPFSKPLRLNIKGMLAQRLAADEETAKRKAEQAALAEPRDRTGTDTDGELLVDDYGSLDVDETSVMPVSIQRLKTDLFVKDALRSFGAG------------------PDAASATLAMARQESALEQKMG--------HLSSLVDSVVEPSTASTAT-----------STNAVPLAPYLMKLRDAAHAGLSVEARIQRNAKRDGTNAAVANTDVGAIATSQHPVAVSIAQEFGLNRKQRLAFYIFANGLLAQNRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPTLAGQIPPGRLLTVAFQGKMASAV 1579          
BLAST of mRNA_L-elsbetiae_contig9314.18318.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)

HSP 1 Score: 668 bits (1724), Expect = 1.370e-206
Identity = 475/1247 (38.09%), Postives = 632/1247 (50.68%), Query Frame = 1
Query:  343 ISTKLGGVDLDVCSRLKGDLPSYVERLQRISDDPVASADFFHITIDAVMTALLRYKATDSDGGALGRVKAFVGMTEEQKRLTLHCHLLIWSVGYNDFSSLRTAMDETPGSYQELATFLSRTIFSQIASPDDVGHAVRG----DAEPTGANSDHVPPPQDPLERPATECIAVPPPSACCPPPGVEPDVAAEHKYLGELHADLANITTKANVHACTFTCHKRGSADS-------------CRFNFGKDGKPLVDRTSVQRGFRTIFPNGESLVGDVLYPASDCAEAVAAASAAEELEKQERLQSDSDAAEVSSGNVDFATVAERFTSKHRREQPMVNSYNPIIQYCTRSNMDIRPLLRDSDARGALFYLMSYFSKTESTMDALLNILAPVVERIKDETNGAAEKVIAAALVRSCSCKTVAHMTLGGPAAASKVLGYSDSKSSSDAVDCAVWPLLKEASAAFGNPASPPASAGNADDEEQGAQPDNHDHSDDDHDAGSDVFISGATGKLRVSTCMHHLYYRRCDKDDTDHPYYNMCFVVWTPIVRVETPKA--GAKASKTTSADELDDGMDDEEPDGEDIENCNDT-----SAPAAAAKKP--GRKLSDRHEFVGLPKMKKQQAT------------------------REKSVLVNIKRDFPRQDTRPEQY---------------------------------------------AQLMLCLFKPLFAIDDLRLPEETSYSDALQRTEDSNEWDPASFSMRSNIRAMLTQRLAADEETARRRAELLAARERGEAGAYEVNGDVFNLACDDDDTTGTNVLPTATNAHRVSAYVNDALDSVRAAGFSFDDSPSTCDTPGLPPPSLLSGRTHDQVQADRAEVRLGQDEIEAQKFMSDFAAKLA-------------------------------------------KADTTACAAPPEEPPVHDADSYNPA------TMEPYIRDLRSKSQSGLAEEAKNKMNERRRATNERVAATDVGRASVYQHDAINRIAEEFGLNRKQRLAFFIFGNAWMARNGSPNPNALRLHVSGGAGSGKSYVLAAINSLIECPALKGVVQPGGLLTVAFQGKQAASVGGSTVHSVCDIGTRQKGTMDKT-DGQAGLSANKTQRWAQLMDGAIAMEEVSMISCKLLGKMHEAAVSVRPSGASLPHAGYICVTFGDLNQLEPVGALSVSHGAADSTRLDGLSNTQRVGRANFMAANASVVLDETN 3648
            I  KL GVD+DV S+LK D P Y E+L+ ++ DPVASA F+H TI  V+T LLR+ A+D DGG LGRVK +VGMTEEQKRL LH HLL+W  GYNDF S R  MD+TP  Y ELA +L   +F+QIA+  D+   +RG       P   N D   P  DPL R A EC+ VPP  +  PP G  PD      Y   ++ DLA +T  AN+H C  TCHK    DS             CRF FG DG+PL   T VQRG      +G   +  V+Y  S   +A AAA+ A     QE    D+  A+V         V+ RF+ +H+R    +NS+NP+I +  RSNMDI+ LL+ SDA+G L+Y+++Y +KTE T+D LL +L PVVERI+ ++  A EK +A  LVRSC CK ++ + +GGPAAASKVLG SD K S   V C + PLL  AS         PA A N+  ++           DD     S V I+   GKL V+   H LY  RC  DDT+HP +   +  W   VR+E      G    K  SA   DD   D+  DG   + C D      S   A+ + P  GR  + R+E VG  + K +Q                          REK  + NI +D P  DT+P  +                                             A+L++C+F P F +DDL+  +ET + DAL+R +D N WDP ++  R NI  ML Q+LAA EETA+RRAE     E+ +     V GDV   +   +D  G +V+P          +V+DA  +  AAGF+ D S     +P      LLSGR+ +    D + V  G D   A  F+S    +L                                            K+ ++A A    +     A S N         +EPYI +LR  SQ GL+ EA    +ERR  TN  VA TD+G  +  QH A   IA+EFGLNRKQR AF+IF N  +A+     P ALRL++ GGAG+GK++VL AI + ++ P +K ++    LL VAFQGKQAA+VGG+TVHSVC       G +    +GQ+ L A+K   W    D  +A+EE+SMISC LL ++H  A S+ P     P    + V  GD NQL P+ A S++HG A   R  G++ T+R G   F  ANA V+L E+N
Sbjct:  727 IVMKLAGVDIDVTSKLKSDFPDYTEKLRLVASDPVASAQFYHNTIQGVLTCLLRFGASDGDGGVLGRVKGYVGMTEEQKRLMLHAHLLVWIYGYNDFVSFRALMDKTPRRYTELARYLDNIVFNQIATLADINRVMRGVDPAHLPPEVGNHDSAQPALDPLLRDAKECMPVPPARSTFPPQGEPPDEDLRDAYARLMYLDLACVTPGANLHKCQATCHKYNHKDSTRXXXXXXXXXXXCRFGFGDDGRPLAQETVVQRGRCVFDTSGNMTIDGVVYSHSSADDAAAAAANAA---FQEAF--DNAVADVRQELARSDPVSGRFSVEHKRLHTHINSFNPVIAFAVRSNMDIKVLLKGSDAKGLLYYILNYATKTEQTLDVLLPLLIPVVERIRADSGDAPEKEMAVRLVRSCLCKQLSSLPIGGPAAASKVLGLSDEKLSHSPVPCPMTPLLTWASKR-----DKPADADNSPGDDXXXXXXXXXXXDD-----SGVIITPFQGKLTVAQRTHLLYRSRCRPDDTEHPLHQKSYFAWCREVRIEKCPTLHGRPRGKQPSARGNDDDDVDDVDDGHPGDECLDDDPVSPSGRTASTRAPRRGRPRATRYELVGEYQNKWEQGALHPYVRTRLYPLCTCLTFARTHIVREKPAISNIIKDVPTSDTQPVAHGFSSFPLFPCLSSARRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLLICMFVPFFTLDDLKRADET-WPDALRRADDDNRWDPGTYPFRLNIEGMLAQKLAAAEETAKRRAERQLLSEKPDTLGDNVAGDVLLDSYGGEDEPGESVIPATVRRMLTDLFVDDAFRTFVAAGFNGDGSSPDGSSP------LLSGRSMEDACRDISFVCGGTDLEAATAFISRQENELENIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSSSASALAGSDSHTTTAGSSNSIGVPKEDPIEPYIIELRKASQDGLSPEACRARDERRDRTNAEVADTDIGAVAALQHVAAFSIAQEFGLNRKQRQAFYIFANGLLAQCRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCPNTDDSDGCLSGAHEGQSTLPASKAAHWKG--DVVLAIEEISMISCNLLVRLHNTACSMFPLHKGQPFGNRVVVMLGDFNQLRPIKARSLAHGTALQERRLGMTVTERYGSDLFRMANACVMLHESN 1949          
BLAST of mRNA_L-elsbetiae_contig9314.18318.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 605 bits (1559), Expect = 8.570e-182
Identity = 338/593 (57.00%), Postives = 409/593 (68.97%), Query Frame = 1
Query:  352 KLGGVDLDVCSRLKGDLPSYVERLQRISDDPVASADFFHITIDAVMTALLRYKATDSDGGALGRVKAFVGMTEEQKRLTLHCHLLIWSVGYNDFSSLRTAMDETPGSYQELATFLSRTIFSQIASPDDVGHAVRGDAEPTGANSDHVPPP-QDPLERPATECIAVPPPSACCPPPGVEPDVAAEHKYLGELHADLANITTKANVHACTFTCHKRGSADSCRFNFGKDGKPLVDRTSVQRGFRTIFPNGESLVGDVLYPASDCAEAVAAASAAEELEKQERLQSDSDAAEVSSGNVDFATVAERFTSKHRREQPMVNSYNPIIQYCTRSNMDIRPLLRDSDARGALFYLMSYFSKTESTMDALLNILAPVVERIKDETNGAAEKVIAAALVRSCSCKTVAHMTLGGPAAASKVLGYSDSKSSSDAVDCAVWPLLKEASAAFGNPASPPASAGNADDEEQGAQPDNHDHSDDDHDAGSDVFISGATGKLRVSTCMHHLYYRRCDKDDTDHPYYNMCFVVWTPIVRVE-TPKAGAKASKTTSADELDDGMDDEEPDGEDIENCNDTSAPAAAAKKPGRKLSDRHEFVGLPKMKKQQ 2124
            KL GVDLDV SRLK DLP YV+RLQ I+ DPVASA+FFH+ IDAVM  LLR+ A D DGG LGRVKA+VGMTEEQ+RLTLHCHLL+W                    YQELA+FLSRTIFSQ+AS +DV HA+ G  EP+ A  D  PPP +DPL+RPATE IA+PPPSAC PPPGVE DVAA+ +YLG L A+LA IT  AN+H CT+TCHK G A+SCRF FGKDGKPL  RT VQRGFR I+PNG+S+VG VLY AS   +A+AAA AA   E++E  +   ++ +VS G +DFATVAERFT+KHRRE   VNSYN II +CTRSNMDI+ LLRDSDARGALFY+++Y +KTE+TMDALLN+LAPVVERIKDE  GA   V AA LVR+CSCKTVAHM +G PAAASKVL Y+D+KS+ DA  C + PLL  ASA+F   A PPA   N    E               D  S   ++ + GK+R+S  +H LY RRC  +DT+HPY+ MC+ VW  +VR+E TP+    A +    ++ + G                     AA +K GR L+ RH+FVGLP + KQQ
Sbjct: 2792 KLAGVDLDVSSRLKTDLPQYVKRLQLIAADPVASAEFFHVMIDAVMKTLLRFGAKDGDGGVLGRVKAYVGMTEEQRRLTLHCHLLVWV-------------------YQELASFLSRTIFSQVASDEDVQHAMTGGIEPSNAPEDGTPPPSRDPLKRPATETIAMPPPSACFPPPGVERDVAADEQYLGPLRAELAEITKAANMHQCTYTCHKHGHANSCRFGFGKDGKPLESRTCVQRGFRQIYPNGDSVVGGVLYSASQSRDAIAAADAAAAKEEEEIQKFADESDDVSRGKLDFATVAERFTAKHRREHRKVNSYNLIIAFCTRSNMDIKALLRDSDARGALFYILNYSTKTETTMDALLNVLAPVVERIKDEAEGAPAAVTAAQLVRACSCKTVAHMPVGAPAAASKVLEYTDAKSAPDARTCPMKPLLALASASFD--ALPPAEGSN----ENADXXXXXXXXXXXXDYHSGAILNTSGGKIRISISLHELYLRRCLPNDTEHPYHGMCYAVWARLVRIENTPRKQKPARRPNDDNDRESGX-------XXXXXXXXXXXXXAARRKRGRPLAKRHDFVGLPTVHKQQ 3352          
BLAST of mRNA_L-elsbetiae_contig9314.18318.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 515 bits (1327), Expect = 1.170e-152
Identity = 387/1134 (34.13%), Postives = 549/1134 (48.41%), Query Frame = 1
Query:  331 TTRYISTKLGGVDLDVCSRLKGDLPSYVERLQRISDDPVASADFFHITIDAVMTALLRYKATDSDGGALGRVKAFVGMTEEQKRLTLHCHLLIWSVGYNDFSSLRTAMDETPGSYQELATFLSRTIFSQIASPDDVGHAVRGD--------AEPTGANSDHVPPPQDPLERPATECIAVPPPSACCPPPGVEPDVAAEHKYLGELHADLANITTKANVHACTFTCHKRGSADSCRFNFGKDGKPLVDRTSVQRGFRTIFPNGESLVGDVLYPASD--CAEAVAAASAAEELEKQERLQSDSDAAEVSSG-NVDFATVAERFTSKHRREQPMVNSYNPIIQYCTRSNMDIRPLLRDSDARGALFYLMSYFSKTESTMDALLNILAPVVERIKDETNGAAEKVIAAALVRSCSCKTVAHMTLGGPAAASKVLGYSDSKSSSDAVDCAVWPLLKEASAAFGNPASPPASAGNADDEEQGAQPDNHDHSDDDHDAGSDVFISGATGKLRVSTCMHHLYYRRCDKDDTDHPYYNMCFVVWTPIVRVE--TPKAGAKASKT-TSADELDDGMDDEEPDGEDIENCNDTSAPAAAAKKPGRKLSDRHEFVGLPKMKKQQATREKSVLVNIKRDFPRQDTRPEQYAQLMLCLFKPLFAIDDLRLPEETSYSDALQRTEDSNEWDPASFSMRSNIRAMLTQRLAADEETARRRAELLAARERGEAGAYEVNGDVFNLACDDDDTTGTNVLPTATNAHRVSAYVNDALDSVRA----AGFSFDDSPSTCDTPGLPPPSLLSGRTHDQVQADRAEVRLGQDEIEAQKFMSDFAAKLAKADTTACAAPPEEPPVHDADSYNPATMEPYIRDLRSKSQSGLAEEAKNKMNERRRATNERVAATDVGRASVYQHDAINRIAEEFGLNRKQRLAFFIFGNAWMARNGSPNPNALRLHVSGGAGSGKSYVLAAINSLIECPALKGVVQPGGLLTVAFQGKQAASVGGSTVHSVCDIGTRQ-KGTMDKT-DGQAGLSANKTQRWAQLMDGAIAMEEVSMISCKLLGKMHEAAVSV------RPSGASLPHAGYICVTFGDLNQLEPVGALSVSHGAADSTRLDGLSNTQRVGRANFMAANASVVLDETNNR 3654
            T   I  +L GV +DV SRLK D P YVERL+ ++ D V SA F+H    AV+T  LR+ ATD DGG LGRVKA VGMTEEQ+RL LHCHLL+W  GYNDFS  R  MD++P  Y +LA FL + IF+Q+A+  D   A  G         +E TG  S+  P   DP    A E IA PPP+AC P  GV+     +  +   ++ DLA IT   ++H C   C+K    DSCRF +GKDGK     T+V RG  T   NG   +  V+YP  D   +  +AAA+A +          D+  +E+  G N +    A+RFT+  RR    +N YNP IQ+  RSNMD++ LL D DA+G +FY+++Y +KT +                  E+ G   K +   LVRSC CK +A ++ GGPAAASKV   SD+K S     C +  L+     AFG                                           GKL      H  Y  RCD+ DT+HP + + +VVW   VRVE  TP A    +++ T  D  DD MD+                P    ++ GR  SD ++ VG  + K  Q  R K+V+VNI RD PR DT+ E + +L+LC+F P F + +L+  +E S+  A+QR EDS+ WD                     ++ A +  +   +    +AG +    D+F +   DDD    +V+P      R    V+ AL  VR+    +G S +D  +      L   +  SG +     A + +      E E        +       TT            D+  Y+P  ++PY+ +LRS SQ+                                          EFGLNRKQRLAFF+F N  +A+  SP  ++LRL++ GGA SGKS+VL A+ + IECPAL G ++   +L VAF+G+QAA+VGG+T+HSVC +G +  +G++ +  D Q+ +   +   W  +    +A+EEVSM+ C+LL  +++AA S+      +P G   P      V  G  NQL         + +    +   +S+  + G   F   NA VVLD+ +NR
Sbjct:  667 TNSPIVLQLAGVTIDVTSRLKSDFPDYVERLRLVACDHVTSAFFYHSVTKAVLTCWLRFGATDGDGGVLGRVKACVGMTEEQRRLMLHCHLLVWVYGYNDFSIFRELMDKSPEKYNKLARFLEQVIFNQVATLTDTNLAFDGHEYEHMSRASEDTGT-SEAGP---DPQHVAAKERIARPPPTACFPRDGVDRCRVHDEAFSRLVYLDLAEITPAVSLHKCQLACNKFNHRDSCRFGYGKDGKAFEQETAVLRGPCTFHTNGNMTINGVVYPPGDPSTSSGIAAAAAFQ-------AAFDASISELDDGDNCNSNPKADRFTAVLRRLGAHINPYNPFIQFVIRSNMDLKVLLEDIDAKGIMFYILNYATKTAN------------------ESQGETSKEMVVRLVRSCLCKQLASLSFGGPAAASKVFDLSDAKISLYTSPCPMGSLI-----AFG-------------------------------------------GKLTAKQRSHLRYRNRCDRTDTEHPLHCVSYVVWHRPVRVERYTPGASNCVNRSDTDNDSSDDDMDE----------------PQHTPQRRGRASSDPYDCVGKYRKKWIQVVRRKAVMVNIMRDIPRADTQQEDHCRLLLCMFLPFFDLSNLKNSDE-SWESAMQRVEDSDSWD---------------------KQRANKENDAPMSHSLDDAG-HGAENDIFLIEYGDDDNDSASVIPETAIGLRTKIVVDTAL-PVRSWHPRSGRSTEDVETD-----LTKITSWSGSSDPTYMAQQEKCLEAMTESEVASLAESTSXXXXXXXTT------------DSHEYDPKVLDPYLLELRSASQA------------------------------------------EFGLNRKQRLAFFVFSNGMLAKKVSPGSDSLRLYIGGGAKSGKSHVLKAMKAFIECPALVGQIEDSRMLAVAFRGQQAAAVGGTTIHSVCQVGRKTFRGSLSRNHDDQSPMKDTQAIHWKGV--NMLAVEEVSMVGCELLVALNKAACSMFPMHKDKPFGNLQPFGNLPLVLCGGFNQLSNF----TCYWSWQLEKEKNMSSLVKYGADLFRMVNACVVLDQGSNR 1618          
BLAST of mRNA_L-elsbetiae_contig9314.18318.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE)

HSP 1 Score: 436 bits (1121), Expect = 2.150e-129
Identity = 241/523 (46.08%), Postives = 328/523 (62.72%), Query Frame = 1
Query:  355 LGGVDLDVCSRLKGDLPSYVERLQRISDDPVASADFFHITIDAVMTALLRYKATDSDGGALGRVKAFVGMTEEQKRLTLHCHLLIWSVGYNDFSSLRTAMDETPGSYQELATFLSRTIFSQIASPDDVGHAVRGDAEPTGANSDHVPPPQDPLERPATECIAVPPPSACCPPPGVEPDVAAEHKYLGELHADLANITTKANVHACTFTCHKRGSADSCRFNFGKDGKPLVDRTSVQRGFRTIFPNGESLVGDVLYPASDCAEAVAAASAAEELEKQERLQSDSDAAEVSSGNVDFATVAERFTSKHRREQPMVNSYNPIIQYCTRSNMDIRPLLRDSDARGALFYLMSYFSKTESTMDALLNILAPVVERIKDETNGAAEKVIAAALVRSCSCKTVAHMTLGGPAAASKVLGYSDSKSSSDAVDCAVWPLLKEASAAFGNPASPPASAGNADDEEQGAQPDNHDHSDDDHDAGSDVFISGATGKLRVSTCMHHLYYRRCDKDDTDHPYYNMCFVVWTPIVRVE 1923
            L GV+LDV SRLK D P+Y ++L+ +++DPVASADFFH TIDAV+T LLR+ A D DGG LGRVK +VGMTEEQKRLTLHCHLL+W  GYNDF+S R  MD+TP  Y ELA +L + IF+QIA+  D+ H +RG        +D   PP D L RPA E +AVPPPS+C P  G   +   + KY   ++ DLA +T  AN+H C  TC K    DSCRF FG  GKPLV +T VQRG      +G   +  ++Y  S   +A AAAS      +  R   D+  A + + N     +++RFT++ RR    +NS+NP+IQ+  RSNMD++ LLRDSDA+G LFY+++Y +KTE  +D LL +LAPV ERI+++++GA EK +A  LVRSC CK ++ +++GGPAAASKV    D + S   V C++ PLL  A++  G            D E       +     +D D    + I+   GKL V+  ++ LY +RCD +DT +P + M +VVW  +VR+E
Sbjct:  586 LAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRGVQPSPEVETDVPAPPPDQLMRPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAAS-----NEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQNLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISHPTVPCSMSPLLTWATSRDGP----------LDGEVDRVDDSSDXXXXNDSDVEESIIITPFKGKLTVAQRVYLLYLKRCDPNDTTNPVHGMSYVVWHKLVRLE 1093          
BLAST of mRNA_L-elsbetiae_contig9314.18318.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)

HSP 1 Score: 433 bits (1113), Expect = 2.300e-125
Identity = 341/1047 (32.57%), Postives = 463/1047 (44.22%), Query Frame = 1
Query:  418 RLQRISDDPVASADFFHITIDAVMTALLRYKATDSDGGALGRVKAFVGMTEEQKRLTLHCHLLIWSVGYNDFSSLRTAMDETPGSYQELATFLSRTIFSQIASPDDVGHAVRGDAEPTGANSDHVPPP-QDPLER-PATECIAVPPPSACCPPPGVEPDVAAEHKYLGELHADLANITTKANVHACTFTCHKRGSADSCRFNFGKDGKPLVDRTSVQRGFRTIFPNGESLVGDVLYPASDCAEAVAAASAAEELEKQERLQSDSDAAEVSSGNVDFATVAERFTSKHRREQPMVNSYNPIIQYCTRSNMDIRPLLRDSDARGALFYLMSYFSKTESTMDALLNILAPVVERIKDETNGAAEKVIAAALVRSCSCKTVAHMTLGGPAAASKVLGYSDSKSSSDAVDCAVWPLLKEASAAFGNPASPPASAGNADDEEQGAQPDNHDH--------SDDDHDAGSDVFISGATGKLRVSTCMHHLYYRRCDKDDTDHPYYNMCFVVWTPIVRVETPKAGAKASKTTSADELDDGMDDEEPDGEDIENCNDTSAPAAAAKKPGRKLSDRHEFVGLPKMKKQQATREKSVLVNIKRDFPRQDTRPEQYAQLMLCLFKPLFAIDDLRLPEETSYSDALQRTEDSNEWDPASFSMRSNIRAMLTQRLAADEETA-RRRAELLAARERGEAGAYEVNGD----VFNLACDDDDTTGTNVLPTATNAHRVSAYVNDALDSVRAAGFSFDDSPSTCDTPGLPPPSLLSGRTHDQVQADRAEVRLGQDEIEAQKFMSDFAAKLAKADTTACAAPPEEPPVHDADSYNPATMEPYIRDLRSKSQSGLAEEAKNKMNERRRATNERVAATDVGRASVYQHDAINRIAEEFGLNRKQRLAFFIFGNAWMARNGSPNPNALRLHVSGGAGSGKSYVLAAINSLIECPALKGVVQPGGLLTVAFQGKQAASVGGSTVHSVCDIGTRQKGTMDKTDGQAGLSANKTQRWAQLMDGAIAMEEVSMISCKLLGKMHEAAVSVRPSGASLPHAGYICVTFGDLNQL 3513
            RL+ ++ DPVASA  +H   DAV+T LLR+ A D DGG L RVK ++GMT+EQ+RL LH H+L+W  G+NDFSS R  MD+ P  Y +LA FL R IF+Q+ S  +V  A+ G      A+S+  P    DPL   P   C              V  D      YL     DLA +   A +H C  TCHK  + D CRF +G  GK     T+V RG  T   NG   +  V        E V+A+S  E                           ++RFT+  R     +N YNPII +  RSNMD+  +LRDSDARG L+Y++ Y +K+E T+D LL +L PVV+RI+D   G   K  A  LVRSC CK +  + +GGPAAASKV G  D+K S   V C + PLL  AS           S    D+E       + D         SDD H     V +S   G+L V+   H LY  RC  +DT+H  + M +V WT +VR E      KA                        NC                              +Q+  R+  V+VNI RD PR DT+PE + +L+LC+F  LF ++DL+   + S++ A+   E  + WD  +   R NI  ML QR+AADEE A R   E   +   G+      +G+    + +L  DDDD     V         + A+V+DA D+  +AG   +DS                       QA   +V      +E +                                                             N RR   N+ VA TD+G A+  QH    RIA+EFGLNR+QRLAF+IF N   A+  SP+                                   ++ GG+L VAFQGKQAASVGG+T+HSVC++  R+       D Q GL+ ++   W       +A++E SM+ C++   + +AA  V P     P    + V  GD NQL
Sbjct:  400 RLRLVASDPVASALLYHSVTDAVLTCLLRFDARDGDGGVLERVKGYLGMTKEQRRLMLHFHVLVWVYGFNDFSSFRDLMDKRPEKYNKLARFLERVIFNQVVSFANVNLAMHGHDHTPRASSEPEPENVSDPLHAFPVERCF-------------VHDDSYPRFMYL-----DLAELVPGAQLHRCQPTCHKFNNRDKCRFGYGDKGKSFEQETTVVRGPCTFHTNGSMTINGV----DAFNECVSASSEPE---------------------------SDRFTATLRLLSTHINPYNPIIHFLIRSNMDLNVMLRDSDARGLLYYVLHYSTKSEQTLDVLLPLLLPVVQRIRDHNEGEPAKETAVRLVRSCLCKQLTSLNIGGPAAASKVFGLPDAKISHTTVPCPMGPLLAWAS-----------SRDTPDEEPDDGDSTSGDXXXXXXXXXSDDQH----GVVVSVVGGRLTVNQWAHVLYLHRCSPEDTEHALHGMSYVSWTRLVRTERYTPFKKAY-----------------------NC------------------------------RQRVMRQGPVMVNIMRDIPRSDTKPEAHCRLLLCIFVALFELEDLKRVGD-SWTTAMANVEQHDRWDKRTKPFRLNIAGMLRQRIAADEERAYREEEEAFVSGSSGQGMEMGSDGEDEIILNDLGGDDDDDQS--VFLVTKQGILMQAFVHDAHDAFVSAGLRGNDS-----------------------QAATRDVMCWFVPVECKSI-----------------------------------------------------------NARRDRNNQEVARTDIGAAAPSQHPVAFRIAQEFGLNREQRLAFYIFANGIFAKKRSPH---------------------------------SPIEEGGMLAVAFQGKQAASVGGTTIHSVCNVPGRKGSGGKDHDDQKGLTEDQALSWEG--KSVLAVKEASMVGCEMELALDKAACKVFPMHKDKPFGNMVAVFCGDFNQL 1209          
BLAST of mRNA_L-elsbetiae_contig9314.18318.1 vs. uniprot
Match: A0A6H5J5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5A5_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 3.100e-106
Identity = 309/928 (33.30%), Postives = 426/928 (45.91%), Query Frame = 1
Query:  433 SDDPVASADFFHITIDAVMTALLRYKATDSDGGALGRVKAFVGMTEEQKRLTLHCHLLIWSVGYNDFSSLRTAMDETPGSYQELATFLSRTIFSQIASPDDVGHAVRGDAEPTGANSDHVPPP-QDPLERPATECIAVPPPSACCPPPGVEPDVAAEHKYLGELHADLANITTKANVHACTFTCHKRGSADSCRFNFGKDGKPLVDRTSVQRGFRTIFPNGESLVGDVLYPASDCAEAVAAASAAEELEKQERLQSDSDAAEVSSGNVDFATVAERFTSKHRREQPMVNSYNPIIQYCTRSNMDIRPLLRDSDARGALFYLMSYFSKTESTMDALLNILAPVVERIKDETNGAAEKVIAAALVRSCSCKTVAHMTLGGPAAASKVLGYSDSKSSSDAVDCAVWPLLKEASAAFGNPASPPASAGNADDEEQGAQPDNHDH-------------SDDDHDAGSDVFISGATGKLRVSTCMHHLYYRRCDKDDTDHPYYNMCFVVWTPIVRVETPKAGAKASKTTSADELDDGMDDEEPDGEDIENCNDTSAPAAAAKKPGRKLSDRHEFVGLPKMKKQQATREKSVLVNIKRDFPRQDTRPEQYAQLMLCLFKPLFAIDDLRLPEETSYSDALQRTEDSNEWDPASFSMRSNIRAMLTQRLAADEETARRRAE-LLAARERG---EAGAYEVNGDVFNLACDDDDTTGTNVLPTATNAHRVSAYVNDALDSVRAAGFSFDDSPSTCDTPGLPPPSLLSGRTHDQVQADRAEVRLGQDEIEAQKFMSDFAAKLAKADTTACAAPPEEPPVHDADSYNPATMEPYIRDLRSKSQSGLAEEAKNKMNERRRATNERVAATDVGRASVYQHDAINRIAEEFGLNRKQRLAFFIFGNAWMARNGSPNPNALRLHVSGGAGSGKSYVLAAINSLI 3162
            S+  VASA ++H   DAV+T LLR  A D DGG LGRVK ++GMTEEQ+R+ LH H+++W  G+N+FSS R  MD+ P  Y+ LA FL R IF+Q+AS  DV  A+ G      A+S+  P    DPL RPA E +A PP  AC P  GV+     +  Y   ++ DLA +   A +H C  TCHK  + + CRF +G   K L   T++ RG  T   NG   +  V+YP  D        S AE +   +  Q+    A     +V     ++RFT+  RR    +N YNPII +  RSNMD + +LRDSDARG L+Y++ Y +K+E T+D LL +L  VV+R + E  G   K  A  LVRSC CK +  + + GPAAASKV G  D+K S     C++ P L  A +             +A DEE    PD+ D              SDD H     V +S   G+L V+   H LY  RC                   ++++                                      S P                             R+  V+VNI RD PR DT+PE + +L+LC F   F  DDL+L  + S++ A+   E  + WD    ++ +    ML  R+AADEE A R+ E    +  RG   E G+   +GDV  +              TAT+A    A     L S++ +                   + L GRT     AD                                      PP + +D   P  +EPY+  L     +GL++ +    N RR   N+ VA TD+G A + QH    RIA+EFGLNR+QR AF+IF N   A+  S +P AL L++ GGAG+ KS+VL AI + I
Sbjct:  438 SERSVASALYYHSVTDAVLTWLLRVDARDGDGGVLGRVKGYLGMTEEQRRVMLHSHVVVWVYGFNEFSSFRDLMDKRPEKYK-LARFLERVIFNQVASFADVNLAMHGHDHTPRASSELEPENVSDPLVRPAKERMAQPPSPACFPRQGVKRCPVHDDSYARLMYLDLAELVPGAQLHRCQPTCHKFNNRNKCRFRYGDKAKSLEQETTLFRGPCTFHTNGGMTISGVVYPPGD-------PSTAESMVAAQAFQN----AFNECVSVASEPESDRFTATVRRLSTHINPYNPIIHFLIRSNMDSKVMLRDSDARGLLYYVLHYSTKSEQTLDVLLPLLFLVVQRKRCEKEGEPAKETAVRLVRSCLCKQLTSLNIDGPAAASKVFGLPDAKISHTTAPCSMRPSLAWAPSR------------DAPDEE----PDDGDSTSGDXXXXXXXXASDDQH----GVVVSVVGGRLTVNQRAHVLYLHRC-------------------LLKIR-------------------------------------SMPCTVM-------------------------RQGPVMVNIMRDIPRSDTKPEAHCRLLLCTFVTFFEQDDLKLVGD-SWTTAMANVEQHDRWDKHK-AIPTKHTGMLRLRIAADEEWANRKEEEAFVSGNRGQEIEMGSDGGSGDVECIT-----------TLTATSAEAALARQESTLTSMKNSQA-----------------ASLGGRTATTPNAD------------------------------------PHPPTNHSD---PVAIEPYLVQLHETLCAGLSQSSVIASNARRNRNNQEVARTDMGAAELSQHPVAFRIAQEFGLNREQRFAFYIFANCMFAKKRSHSP-ALILYIGGGAGAEKSWVLKAIKTFI 1182          
BLAST of mRNA_L-elsbetiae_contig9314.18318.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 3.560e-84
Identity = 204/510 (40.00%), Postives = 282/510 (55.29%), Query Frame = 1
Query: 2146 LVNIKRDFPRQDTRPEQYAQLMLCLFKPLFAIDDLRLPEETSYSDALQRTEDSNEWDPASFSMRSNIRAMLTQRLAADEETARRRAELLAARERGEAGAYEVNGDVFNLACDDDDTTGTNVLPTATNAHRVSAYVNDALDSVRAAGFSFDDSPSTCDTPGLPPPSLLSGRTHDQVQADRAEVRLGQDEIEAQKFMS----DFAAKLAKADTTACAAPPEEPPVHDADSY---NPATMEPYIRDLRSKSQSGLAEEAKNKMNERRRATNERVAATDVGRASVYQHDAINRIAEEFGLNRKQRLAFFIFGNAWMARNGSPNPNALRLHVSGGAGSGKSYVLAAINSLIECPALKGVVQPGGLLTVAFQGKQAASVGGSTVHSVCDIGTRQKGTMDKT-DGQAGLSANKTQRWAQLMDGAIAMEEVSMISCKLLGKMHEAAVSVRP-SGASLPHAGYICVTFGDLNQLEPVGALSVSHGAADSTRLDGLSNTQRVGRANFMAANASVVLDETN 3648
            + NI +D PR DT+P  +A+L++CLF P F +DDL+  +ET + DAL+R +D N WDP ++  R NI+ ML Q+LAA EETA+R AE     E+  A    + GDV   +   +D  G +V+P          +VNDA  +  AAGF+ D S     +P      LLSGR+ +    D + VR G D   A   MS                   +     P   + S+   N   + P I +LR  SQ GL+ EA    +ERR  TN  VA TD+G  +  QH A   IA+EFGLNRKQR AF+IF N  +++     P ALRL++ GGAG+GK++VL AI + ++ P +K ++    LL VAFQGKQAA+VGG+TVHSVC       G +    +GQ+ L A++   W +  D  +A+EE SMISC LL ++H  A S+ P      P    + V  GD NQL P+ A S++H  A   R  G++ T+R G   F  ANA V+LDE+N
Sbjct:    1 MANIMKDVPRSDTQPVAHARLLICLFVPFFTLDDLKRADET-WPDALRRADDKNRWDPGTYPFRLNIQGMLAQKLAAAEETAKRHAERQLLSEKTHALGDNMAGDVLLDSYGGEDEPGESVIPATVRRMLTDLFVNDAFRTFVAAGFNGDGSTRDASSP------LLSGRSMEDTCLDISFVRGGTDLEAATASMSRQENXXXXXXXXXXXXXXGSDSNRTPAASSSSFGVPNEDPLGPCIMELRKASQDGLSPEACRARDERRDRTNAEVAGTDIGAVAALQHVAAFTIAQEFGLNRKQRQAFYIFANGLLSQFRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCPNTGDSYGCLSGAHEGQSTLPASEAAHWQR--DVILAIEESSMISCNLLVRLHNTACSMFPLHKGQQPFGNRVVVMLGDFNQLRPIKARSLAHLTALQERRLGMTVTERYGSDLFRMANACVMLDESN 501          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9314.18318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JT57_9PHAE0.000e+056.94ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
D7G3U9_ECTSI3.460e-22040.59ATP-dependent DNA helicase n=2 Tax=Ectocarpus sili... [more]
A0A6H5L0L4_9PHAE1.190e-20842.09Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5KIB1_9PHAE1.370e-20638.09ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KTA2_9PHAE8.570e-18257.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN07_9PHAE1.170e-15234.13ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K8N9_9PHAE2.150e-12946.08Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5K882_9PHAE2.300e-12532.57ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5J5A5_9PHAE3.100e-10633.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXW4_9PHAE3.560e-8440.00ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9314contigL-elsbetiae_contig9314:3036..7524 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score716.1
Seed ortholog evalue2.8e-203
Seed eggNOG ortholog2880.D7G3U9
KEGG koko:K15255,ko:K20647
Hectar predicted targeting categoryother localisation
EggNOG free text desc.G-quadruplex DNA unwinding
EggNOG OGsCOG0507@1,KOG0987@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029,ko03032,ko04131
Exons6
Model size3658
Cds size3654
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9314.18318.1prot_L-elsbetiae_contig9314.18318.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9314 3038..7524 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817001.6330779-CDS-L-elsbetiae_contig9314:3037..45671622817001.6330779-CDS-L-elsbetiae_contig9314:3037..4567Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9314 3038..4567 -
1691683974.1384125-CDS-L-elsbetiae_contig9314:3037..45671691683974.1384125-CDS-L-elsbetiae_contig9314:3037..4567Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9314 3038..4567 -
1622817001.6446235-CDS-L-elsbetiae_contig9314:4738..55341622817001.6446235-CDS-L-elsbetiae_contig9314:4738..5534Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9314 4739..5534 -
1691683974.154853-CDS-L-elsbetiae_contig9314:4738..55341691683974.154853-CDS-L-elsbetiae_contig9314:4738..5534Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9314 4739..5534 -
1622817001.6550794-CDS-L-elsbetiae_contig9314:5732..60501622817001.6550794-CDS-L-elsbetiae_contig9314:5732..6050Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9314 5733..6050 -
1691683974.1690266-CDS-L-elsbetiae_contig9314:5732..60501691683974.1690266-CDS-L-elsbetiae_contig9314:5732..6050Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9314 5733..6050 -
1622817001.666681-CDS-L-elsbetiae_contig9314:6193..66441622817001.666681-CDS-L-elsbetiae_contig9314:6193..6644Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9314 6194..6644 -
1691683974.1804347-CDS-L-elsbetiae_contig9314:6193..66441691683974.1804347-CDS-L-elsbetiae_contig9314:6193..6644Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9314 6194..6644 -
1622817001.6781657-CDS-L-elsbetiae_contig9314:6767..72901622817001.6781657-CDS-L-elsbetiae_contig9314:6767..7290Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9314 6768..7290 -
1691683974.1903334-CDS-L-elsbetiae_contig9314:6767..72901691683974.1903334-CDS-L-elsbetiae_contig9314:6767..7290Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9314 6768..7290 -
1622817001.6897557-CDS-L-elsbetiae_contig9314:7488..75241622817001.6897557-CDS-L-elsbetiae_contig9314:7488..7524Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9314 7489..7524 -
1691683974.2021353-CDS-L-elsbetiae_contig9314:7488..75241691683974.2021353-CDS-L-elsbetiae_contig9314:7488..7524Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9314 7489..7524 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9314.18318.1

>prot_L-elsbetiae_contig9314.18318.1 ID=prot_L-elsbetiae_contig9314.18318.1|Name=mRNA_L-elsbetiae_contig9314.18318.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1218bp
QGCTAHQGSLNTASSRSREGSKGCNKEVTLLQDLGLGLGLLVYTTRYIST
NCIWALDLCMYVCRYCVFASKPTTHFFAKFTIVAQGSSRSREGSKGCNKE
VNVVARLLVYTTRYISTKLGGVDLDVCSRLKGDLPSYVERLQRISDDPVA
SADFFHITIDAVMTALLRYKATDSDGGALGRVKAFVGMTEEQKRLTLHCH
LLIWSVGYNDFSSLRTAMDETPGSYQELATFLSRTIFSQIASPDDVGHAV
RGDAEPTGANSDHVPPPQDPLERPATECIAVPPPSACCPPPGVEPDVAAE
HKYLGELHADLANITTKANVHACTFTCHKRGSADSCRFNFGKDGKPLVDR
TSVQRGFRTIFPNGESLVGDVLYPASDCAEAVAAASAAEELEKQERLQSD
SDAAEVSSGNVDFATVAERFTSKHRREQPMVNSYNPIIQYCTRSNMDIRP
LLRDSDARGALFYLMSYFSKTESTMDALLNILAPVVERIKDETNGAAEKV
IAAALVRSCSCKTVAHMTLGGPAAASKVLGYSDSKSSSDAVDCAVWPLLK
EASAAFGNPASPPASAGNADDEEQGAQPDNHDHSDDDHDAGSDVFISGAT
GKLRVSTCMHHLYYRRCDKDDTDHPYYNMCFVVWTPIVRVETPKAGAKAS
KTTSADELDDGMDDEEPDGEDIENCNDTSAPAAAAKKPGRKLSDRHEFVG
LPKMKKQQATREKSVLVNIKRDFPRQDTRPEQYAQLMLCLFKPLFAIDDL
RLPEETSYSDALQRTEDSNEWDPASFSMRSNIRAMLTQRLAADEETARRR
AELLAARERGEAGAYEVNGDVFNLACDDDDTTGTNVLPTATNAHRVSAYV
NDALDSVRAAGFSFDDSPSTCDTPGLPPPSLLSGRTHDQVQADRAEVRLG
QDEIEAQKFMSDFAAKLAKADTTACAAPPEEPPVHDADSYNPATMEPYIR
DLRSKSQSGLAEEAKNKMNERRRATNERVAATDVGRASVYQHDAINRIAE
EFGLNRKQRLAFFIFGNAWMARNGSPNPNALRLHVSGGAGSGKSYVLAAI
NSLIECPALKGVVQPGGLLTVAFQGKQAASVGGSTVHSVCDIGTRQKGTM
DKTDGQAGLSANKTQRWAQLMDGAIAMEEVSMISCKLLGKMHEAAVSVRP
SGASLPHAGYICVTFGDLNQLEPVGALSVSHGAADSTRLDGLSNTQRVGR
ANFMAANASVVLDETNNR
back to top

mRNA from alignment at L-elsbetiae_contig9314:3036..7524-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9314.18318.1 ID=mRNA_L-elsbetiae_contig9314.18318.1|Name=mRNA_L-elsbetiae_contig9314.18318.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4489bp|location=Sequence derived from alignment at L-elsbetiae_contig9314:3036..7524- (Laminarionema elsbetiae ELsaHSoW15)
CAAGGTTGCACGGCGCATCAAGGCAGCCTCAACACGGTGAGCCTACGGCA TTGGGGACTTTATAGGCTGGTCTAGGGCGGTCTACGGCTTCGTTGTTTAC GCCTACATTCCATCGTACAACTACTAGTATGTATGTAGTCTATGTATGTA ATATGTATGTATGTATGTAGATACTGCGTTTTCGCAAGCAAGCCCACTAC TCATTTCTTCGCTAAATTTACTATCGTTGCGCAGGCCAGCAGCCGCAGCC GCGAAGGCAGCAAAGGCTGCAACAAAGAGGTGACGTTGTTGCAAGACTTA GGGTTAGGGTTAGGTTTACTAGTCTATACAACAAGGTACATTTCGACGAA TTGCATTTGGGCGCTCGATCTATGTATGTATGTATGTAGATACTGCGTTT TCGCAAGCAAGCCCACTACTCATTTCTTCGCTAAATTTACTATCGTTGCG CAGGGCAGCAGCCGCAGCCGCGAAGGCAGCAAAGGCTGCAACAAAGAGGT GAACGTTGTTGCAAGACTACTAGTCTATACAACAAGGTACATTTCGACGA AGCTCGGGGGTGTCGACCTCGACGTCTGCAGCCGGTTAAAGGGCGACCTG CCTTCGTATGTGGAGAGATTGCAGAGAATATCCGACGACCCGGTGGCGTC GGCGGATTTTTTCCATATTACGATTGACGCTGTCATGACCGCTCTTCTGC GCTACAAAGCGACGGATTCGGATGGAGGGGCACTGGGTCGAGTCAAGGCA TTCGTGGGTGAGTTCGATTCTGGCCTTTTCGTCCGTTTAGACCTTGGCGC AGCACAAATAAATATACACGAAAGAGAGAGAGAGAGAGTTCATATCTGAG CACGCACATTTTATTCGGTTGCTGTCACAGGTATGACGGAGGAACAGAAA CGCTTGACTCTTCACTGTCACCTCCTGATTTGGTCTGTTGGATACAACGA TTTTTCGAGCTTGAGGACGGCGATGGACGAGACTCCGGGAAGCTACCAGG AACTCGCCACTTTTTTGAGCCGCACCATCTTCTCCCAAATTGCATCACCG GACGATGTTGGACATGCAGTGCGTGGGGACGCAGAACCGACAGGTGCAAA CAGTGACCACGTGCCCCCTCCTCAAGACCCGCTGGAGCGCCCAGCAACGG AATGCATCGCCGTACCGCCCCCCTCTGCTTGCTGCCCTCCGCCCGGGGTT GAGCCCGACGTCGCCGCCGAACACAAGTACCTTGGCGAATTACACGCGGA TCTCGCTAACATCACCACCAAGGCCAACGTCCACGCCTGTACCTTCACCT GCCACAAGCGTGGCAGTGCCGATTCTTGCAGGTATGTATGTAAACCTTCT GCCACTTTTCGCTTCGTGCGCAGTAATCCACCTCGCCTCGGCTCACGCCC GAACTTTTGTTTTCGATTACAACAGTCCGATGACATTGCACGCGTGTGAC AATATGCCCATCGCTACTTGTCAGGTTTAACTTCGGCAAGGACGGGAAAC CTCTCGTGGACAGGACGTCTGTGCAACGCGGGTTCCGGACAATCTTTCCG AACGGCGAAAGCCTGGTCGGAGATGTGTTGTACCCTGCCTCCGACTGTGC CGAAGCTGTTGCTGCAGCCAGTGCTGCGGAAGAACTGGAGAAACAAGAGA GACTGCAGTCCGACAGCGACGCCGCAGAAGTTTCGAGCGGCAACGTCGAC TTCGCCACCGTCGCAGAACGGTTCACTAGCAAGCATCGTCGCGAGCAACC GATGGTCAACAGCTACAACCCCATCATCCAGTACTGCACCAGGTGTGTTT GTGTGTGTTTGTGTTTGTGTGTATGTGTGTGCGTATGTGTGTGTGTATGT ACATAGGTGTAGTTTTGTTCCACTTCGAGCGCCTGTACACTTTGTGAGTG ATTTTTTGTCGGTACAATAAATCGCACATTCATATCAGCGACAAGGAGCG TAAACGTTGTTTTTTTCTGTTTCTTTTTGTCTTTTACCAGGTCGAATATG GATATACGACCACTCCTGCGCGATAGCGATGCTAGGGGAGCGCTTTTCTA CCTAATGTCGTATTTCTCCAAGACCGAGTCGACGATGGACGCCCTGCTCA ACATCTTGGCTCCAGTAGTCGAACGCATCAAAGACGAAACAAACGGAGCC GCAGAAAAAGTCATTGCAGCAGCATTGGTGCGGTCGTGCTCCTGCAAGAC GGTCGCCCACATGACCCTTGGTGGGCCTGCCGCGGCCAGCAAAGTGCTAG GCTATAGCGACTCCAAGTCTTCGTCAGACGCCGTAGACTGCGCCGTGTGG CCCTTGCTCAAGGAAGCATCCGCTGCCTTCGGTAACCCAGCCTCACCACC TGCATCTGCTGGGAATGCCGACGATGAGGAGCAGGGAGCCCAGCCCGACA ACCACGACCACAGCGATGACGACCACGACGCCGGAAGTGACGTCTTCATC AGCGGCGCCACAGGGAAGCTGAGAGTATCGACATGCATGCATCATCTATA CTACAGGCGGTGCGACAAGGACGACACAGACCACCCTTACTACAACATGT GCTTCGTTGTATGGACTCCAATCGTTCGGGTCGAGACCCCTAAGGCGGGC GCTAAGGCGTCCAAAACCACATCCGCCGACGAACTCGACGACGGCATGGA TGACGAGGAGCCCGACGGGGAGGATATCGAGAACTGCAACGACACCAGTG CTCCCGCTGCAGCTGCTAAGAAACCCGGTCGCAAACTCTCTGATCGACAC GAGTTTGTCGGTCTTCCCAAGATGAAGAAACAACAGGTATGATGGCAGCG ATGGTTGTTTTCCGGCTCGTAGTTCGACGCCCTCGTACCTCCTTGTCGGT GTTTTCGTGACAACGTGTACGTCTCATTTTTTACTACACACCGTGTCAGC ACAACCACAACAAGTAATTGTTAAACTCTCCTTCTTTCTGTCATGGTGCG CTCCCAGGCGACCCGCGAGAAATCGGTCTTGGTCAACATCAAACGAGATT TTCCCAGGCAAGACACGAGACCAGAGCAGTATGCCCAGCTTATGTTGTGC CTGTTCAAGCCGTTGTTCGCAATCGACGACCTTCGCCTGCCGGAGGAGAC CTCGTACTCGGACGCTCTTCAGCGGACGGAGGATTCGAATGAGTGGGACC CTGCGTCGTTCTCTATGAGATCGAATATTCGCGCGATGCTGACGCAACGG CTAGCTGCTGATGAGGAAACGGCGCGGCGGAGGGCGGAGCTTCTAGCGGC GAGGGAGAGAGGCGAGGCCGGTGCCTACGAGGTGAACGGTGACGTTTTCA ACTTGGCTTGCGACGATGACGACACGACAGGCACCAACGTCTTGCCGACA GCGACAAACGCTCACAGGGTGTCCGCGTACGTCAACGACGCCTTGGACAG CGTGCGTGCTGCCGGTTTCAGTTTTGACGATAGCCCCAGCACTTGCGACA CCCCTGGCCTACCCCCGCCGAGCTTGTTGAGTGGCCGCACCCACGACCAA GTTCAGGCCGACAGGGCCGAGGTTCGTCTTGGCCAGGACGAAATCGAGGC CCAGAAGTTCATGTCGGATTTTGCGGCGAAACTCGCAAAAGCAGACACCA CCGCCTGCGCTGCACCGCCAGAAGAACCTCCTGTTCATGATGCCGACTCT TACAACCCCGCCACAATGGAGCCCTACATCCGTGATCTCCGCAGTAAGTC CCAATCCGGGTTGGCGGAGGAGGCCAAGAACAAGATGAACGAGAGGAGAC GGGCCACCAACGAACGAGTTGCTGCTACGGACGTCGGCCGAGCTTCTGTG TATCAACATGATGCAATCAACCGCATCGCCGAAGAGTTTGGTCTCAACAG AAAGCAACGGCTGGCCTTTTTCATCTTTGGCAACGCTTGGATGGCGAGGA ACGGCTCTCCTAACCCGAACGCCTTGCGTCTGCACGTCAGCGGTGGGGCG GGGTCAGGCAAGAGCTATGTTTTGGCAGCTATCAACAGCTTGATCGAGTG CCCTGCATTGAAGGGTGTTGTGCAGCCTGGCGGTTTGCTGACAGTCGCCT TTCAGGGCAAGCAAGCCGCCAGCGTAGGAGGCTCGACCGTACACTCTGTT TGCGACATTGGTACGCGCCAGAAAGGTACGATGGACAAGACGGACGGACA GGCCGGTCTGTCGGCGAACAAGACACAGCGATGGGCTCAGCTCATGGATG GTGCTATTGCCATGGAGGAGGTTTCGATGATTAGTTGCAAGCTCCTTGGG AAAATGCATGAAGCAGCGGTATCTGTGAGACCCTCCGGAGCCAGCCTCCC CCACGCCGGTTATATCTGCGTGACCTTCGGCGACCTCAATCAGCTGGAAC CCGTCGGCGCCTTATCCGTTTCGCACGGCGCTGCGGACTCTACCCGCCTG GACGGCCTTTCCAACACTCAGCGTGTCGGCCGCGCCAACTTCATGGCAGC GAATGCCTCGGTCGTACTGGATGAGACCAACAACAGGTT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig9314:3036..7524-

>mRNA_L-elsbetiae_contig9314.18318.1 ID=mRNA_L-elsbetiae_contig9314.18318.1|Name=mRNA_L-elsbetiae_contig9314.18318.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=7308bp|location=Sequence derived from alignment at L-elsbetiae_contig9314:3036..7524- (Laminarionema elsbetiae ELsaHSoW15)
CAAGGTTGCACGGCGCATCAAGGCAGCCTCAACACGCAAGGTTGCACGGC
GCATCAAGGCAGCCTCAACACGGCCAGCAGCCGCAGCCGCGAAGGCAGCA
AAGGCTGCAACAAAGAGGTGACGTTGTTGCAAGACTTAGGGTTAGGGTTA
GGTTTACTAGTCTATACAACAAGGTACATTTCGACGAATTGCATTTGGGC
GCTCGATCTATGTATGTATGTATGTAGATACTGCGTTTTCGCAAGCAAGC
CCACTACTCATTTCTTCGCTAAATTTACTATCGTTGCGCAGGGCAGCAGC
CGCAGCCGCGAAGGCAGCAAAGGCTGCAACAAAGAGGTGAACGTTGTTGC
AAGACTACTAGTCTATACAACAAGGTACATTTCGACGAAGCTCGGGGGTG
TCGACCTCGACGTCTGCAGCCGGTTAAAGGGCGACCTGCCTTCGTATGTG
GAGAGATTGCAGAGAATATCCGACGACCCGGTGGCGTCGGCGGATTTTTT
CCATATTACGATTGACGCTGTCATGACCGCTCTTCTGCGCTACAAAGCGA
CGGATTCGGATGGAGGGGCACTGGGTCGAGTCAAGGCATTCGTGGGCCAG
CAGCCGCAGCCGCGAAGGCAGCAAAGGCTGCAACAAAGAGGTGACGTTGT
TGCAAGACTTAGGGTTAGGGTTAGGTTTACTAGTCTATACAACAAGGTAC
ATTTCGACGAATTGCATTTGGGCGCTCGATCTATGTATGTATGTATGTAG
ATACTGCGTTTTCGCAAGCAAGCCCACTACTCATTTCTTCGCTAAATTTA
CTATCGTTGCGCAGGGCAGCAGCCGCAGCCGCGAAGGCAGCAAAGGCTGC
AACAAAGAGGTGAACGTTGTTGCAAGACTACTAGTCTATACAACAAGGTA
CATTTCGACGAAGCTCGGGGGTGTCGACCTCGACGTCTGCAGCCGGTTAA
AGGGCGACCTGCCTTCGTATGTGGAGAGATTGCAGAGAATATCCGACGAC
CCGGTGGCGTCGGCGGATTTTTTCCATATTACGATTGACGCTGTCATGAC
CGCTCTTCTGCGCTACAAAGCGACGGATTCGGATGGAGGGGCACTGGGTC
GAGTCAAGGCATTCGTGGGTATGACGGAGGAACAGAAACGCTTGACTCTT
CACTGTCACCTCCTGATTTGGTCTGTTGGATACAACGATTTTTCGAGCTT
GAGGACGGCGATGGACGAGACTCCGGGAAGCTACCAGGAACTCGCCACTT
TTTTGAGCCGCACCATCTTCTCCCAAATTGCATCACCGGACGATGTTGGA
CATGCAGTGCGTGGGGACGCAGAACCGACAGGTGCAAACAGTGACCACGT
GCCCCCTCCTCAAGACCCGCTGGAGCGCCCAGCAACGGAATGCATCGCCG
TACCGCCCCCCTCTGCTTGCTGCCCTCCGCCCGGGGTTGAGCCCGACGTC
GCCGCCGAACACAAGTACCTTGGCGAATTACACGCGGATCTCGCTAACAT
CACCACCAAGGCCAACGTCCACGCCTGTACCTTCACCTGCCACAAGCGTG
GCAGTGCCGATTCTTGCAGGTATGACGGAGGAACAGAAACGCTTGACTCT
TCACTGTCACCTCCTGATTTGGTCTGTTGGATACAACGATTTTTCGAGCT
TGAGGACGGCGATGGACGAGACTCCGGGAAGCTACCAGGAACTCGCCACT
TTTTTGAGCCGCACCATCTTCTCCCAAATTGCATCACCGGACGATGTTGG
ACATGCAGTGCGTGGGGACGCAGAACCGACAGGTGCAAACAGTGACCACG
TGCCCCCTCCTCAAGACCCGCTGGAGCGCCCAGCAACGGAATGCATCGCC
GTACCGCCCCCCTCTGCTTGCTGCCCTCCGCCCGGGGTTGAGCCCGACGT
CGCCGCCGAACACAAGTACCTTGGCGAATTACACGCGGATCTCGCTAACA
TCACCACCAAGGCCAACGTCCACGCCTGTACCTTCACCTGCCACAAGCGT
GGCAGTGCCGATTCTTGCAGGTTTAACTTCGGCAAGGACGGGAAACCTCT
CGTGGACAGGACGTCTGTGCAACGCGGGTTCCGGACAATCTTTCCGAACG
GCGAAAGCCTGGTCGGAGATGTGTTGTACCCTGCCTCCGACTGTGCCGAA
GCTGTTGCTGCAGCCAGTGCTGCGGAAGAACTGGAGAAACAAGAGAGACT
GCAGTCCGACAGCGACGCCGCAGAAGTTTCGAGCGGCAACGTCGACTTCG
CCACCGTCGCAGAACGGTTCACTAGCAAGCATCGTCGCGAGCAACCGATG
GTCAACAGCTACAACCCCATCATCCAGTACTGCACCAGGTTTAACTTCGG
CAAGGACGGGAAACCTCTCGTGGACAGGACGTCTGTGCAACGCGGGTTCC
GGACAATCTTTCCGAACGGCGAAAGCCTGGTCGGAGATGTGTTGTACCCT
GCCTCCGACTGTGCCGAAGCTGTTGCTGCAGCCAGTGCTGCGGAAGAACT
GGAGAAACAAGAGAGACTGCAGTCCGACAGCGACGCCGCAGAAGTTTCGA
GCGGCAACGTCGACTTCGCCACCGTCGCAGAACGGTTCACTAGCAAGCAT
CGTCGCGAGCAACCGATGGTCAACAGCTACAACCCCATCATCCAGTACTG
CACCAGGTCGAATATGGATATACGACCACTCCTGCGCGATAGCGATGCTA
GGGGAGCGCTTTTCTACCTAATGTCGTATTTCTCCAAGACCGAGTCGACG
ATGGACGCCCTGCTCAACATCTTGGCTCCAGTAGTCGAACGCATCAAAGA
CGAAACAAACGGAGCCGCAGAAAAAGTCATTGCAGCAGCATTGGTGCGGT
CGTGCTCCTGCAAGACGGTCGCCCACATGACCCTTGGTGGGCCTGCCGCG
GCCAGCAAAGTGCTAGGCTATAGCGACTCCAAGTCTTCGTCAGACGCCGT
AGACTGCGCCGTGTGGCCCTTGCTCAAGGAAGCATCCGCTGCCTTCGGTA
ACCCAGCCTCACCACCTGCATCTGCTGGGAATGCCGACGATGAGGAGCAG
GGAGCCCAGCCCGACAACCACGACCACAGCGATGACGACCACGACGCCGG
AAGTGACGTCTTCATCAGCGGCGCCACAGGGAAGCTGAGAGTATCGACAT
GCATGCATCATCTATACTACAGGCGGTGCGACAAGGACGACACAGACCAC
CCTTACTACAACATGTGCTTCGTTGTATGGACTCCAATCGTTCGGGTCGA
GACCCCTAAGGCGGGCGCTAAGGCGTCCAAAACCACATCCGCCGACGAAC
TCGACGACGGCATGGATGACGAGGAGCCCGACGGGGAGGATATCGAGAAC
TGCAACGACACCAGTGCTCCCGCTGCAGCTGCTAAGAAACCCGGTCGCAA
ACTCTCTGATCGACACGAGTTTGTCGGTCTTCCCAAGATGAAGAAACAAC
AGGTCGAATATGGATATACGACCACTCCTGCGCGATAGCGATGCTAGGGG
AGCGCTTTTCTACCTAATGTCGTATTTCTCCAAGACCGAGTCGACGATGG
ACGCCCTGCTCAACATCTTGGCTCCAGTAGTCGAACGCATCAAAGACGAA
ACAAACGGAGCCGCAGAAAAAGTCATTGCAGCAGCATTGGTGCGGTCGTG
CTCCTGCAAGACGGTCGCCCACATGACCCTTGGTGGGCCTGCCGCGGCCA
GCAAAGTGCTAGGCTATAGCGACTCCAAGTCTTCGTCAGACGCCGTAGAC
TGCGCCGTGTGGCCCTTGCTCAAGGAAGCATCCGCTGCCTTCGGTAACCC
AGCCTCACCACCTGCATCTGCTGGGAATGCCGACGATGAGGAGCAGGGAG
CCCAGCCCGACAACCACGACCACAGCGATGACGACCACGACGCCGGAAGT
GACGTCTTCATCAGCGGCGCCACAGGGAAGCTGAGAGTATCGACATGCAT
GCATCATCTATACTACAGGCGGTGCGACAAGGACGACACAGACCACCCTT
ACTACAACATGTGCTTCGTTGTATGGACTCCAATCGTTCGGGTCGAGACC
CCTAAGGCGGGCGCTAAGGCGTCCAAAACCACATCCGCCGACGAACTCGA
CGACGGCATGGATGACGAGGAGCCCGACGGGGAGGATATCGAGAACTGCA
ACGACACCAGTGCTCCCGCTGCAGCTGCTAAGAAACCCGGTCGCAAACTC
TCTGATCGACACGAGTTTGTCGGTCTTCCCAAGATGAAGAAACAACAGGC
GACCCGCGAGAAATCGGTCTTGGTCAACATCAAACGAGATTTTCCCAGGC
AAGACACGAGACCAGAGCAGTATGCCCAGCTTATGTTGTGCCTGTTCAAG
CCGTTGTTCGCAATCGACGACCTTCGCCTGCCGGAGGAGACCTCGTACTC
GGACGCTCTTCAGCGGACGGAGGATTCGAATGAGTGGGACCCTGCGTCGT
TCTCTATGAGATCGAATATTCGCGCGATGCTGACGCAACGGCTAGCTGCT
GATGAGGAAACGGCGCGGCGGAGGGCGGAGCTTCTAGCGGCGAGGGAGAG
AGGCGAGGCCGGTGCCTACGAGGTGAACGGTGACGTTTTCAACTTGGCTT
GCGACGATGACGACACGACAGGCACCAACGTCTTGCCGACAGCGACAAAC
GCTCACAGGGTGTCCGCGTACGTCAACGACGCCTTGGACAGCGTGCGTGC
TGCCGGTTTCAGTTTTGACGATAGCCCCAGCACTTGCGACACCCCTGGCC
TACCCCCGCCGAGCTTGTTGAGTGGCCGCACCCACGACCAAGTTCAGGCC
GACAGGGCCGAGGTTCGTCTTGGCCAGGACGAAATCGAGGCCCAGAAGTT
CATGTCGGATTTTGCGGCGAAACTCGCAAAAGCAGACACCACCGCCTGCG
CTGCACCGCCAGAAGAACCTCCTGTTCATGATGCCGACTCTTACAACCCC
GCCACAATGGAGCCCTACATCCGTGATCTCCGCAGTAAGTCCCAATCCGG
GTTGGCGGAGGAGGCCAAGAACAAGATGAACGAGAGGAGACGGGCCACCA
ACGAACGAGTTGCTGCTACGGACGTCGGCCGAGCTTCTGTGTATCAACAT
GATGCAATCAACCGCATCGCCGAAGAGTTTGGTCTCAACAGAAAGCAACG
GCTGGCCTTTTTCATCTTTGGCAACGCTTGGATGGCGAGGAACGGCTCTC
CTAACCCGAACGCCTTGCGTCTGCACGTCAGCGGTGGGGCGGGGTCAGGC
AAGAGCTATGTTTTGGCAGCTATCAACAGCTTGATCGAGTGCCCTGCATT
GAAGGGTGTTGTGCAGCCTGGCGGTTTGCTGACAGTCGCCTTTCAGGGCA
AGCAAGCCGCCAGCGTAGGAGGCTCGACCGTACACTCTGTTTGCGACATT
GGTACGCGCCAGAAAGGTACGATGGACAAGACGGACGGACAGGCCGGTCT
GTCGGCGAACAAGACACAGCGATGGGCTCAGCTCATGGATGGTGCTATTG
CCATGGAGGAGGTTTCGATGATTAGTTGCAAGCTCCTTGGGAAAATGCAT
GAAGCAGCGGTATCTGTGAGACCCTCCGGAGCCAGCCTCCCCCACGCCGG
TTATATCTGCGTGACCTTCGGCGACCTCAATCAGCTGGAACCCGTCGGCG
CCTTATCCGTTTCGCACGGCGCTGCGGACTCTACCCGCCTGGACGGCCTT
TCCAACACTCAGCGTGTCGGCCGCGCCAACTTCATGGCAGCGAATGCCTC
GGTCGTACTGGATGAGACCAACAACAGGGCGACCCGCGAGAAATCGGTCT
TGGTCAACATCAAACGAGATTTTCCCAGGCAAGACACGAGACCAGAGCAG
TATGCCCAGCTTATGTTGTGCCTGTTCAAGCCGTTGTTCGCAATCGACGA
CCTTCGCCTGCCGGAGGAGACCTCGTACTCGGACGCTCTTCAGCGGACGG
AGGATTCGAATGAGTGGGACCCTGCGTCGTTCTCTATGAGATCGAATATT
CGCGCGATGCTGACGCAACGGCTAGCTGCTGATGAGGAAACGGCGCGGCG
GAGGGCGGAGCTTCTAGCGGCGAGGGAGAGAGGCGAGGCCGGTGCCTACG
AGGTGAACGGTGACGTTTTCAACTTGGCTTGCGACGATGACGACACGACA
GGCACCAACGTCTTGCCGACAGCGACAAACGCTCACAGGGTGTCCGCGTA
CGTCAACGACGCCTTGGACAGCGTGCGTGCTGCCGGTTTCAGTTTTGACG
ATAGCCCCAGCACTTGCGACACCCCTGGCCTACCCCCGCCGAGCTTGTTG
AGTGGCCGCACCCACGACCAAGTTCAGGCCGACAGGGCCGAGGTTCGTCT
TGGCCAGGACGAAATCGAGGCCCAGAAGTTCATGTCGGATTTTGCGGCGA
AACTCGCAAAAGCAGACACCACCGCCTGCGCTGCACCGCCAGAAGAACCT
CCTGTTCATGATGCCGACTCTTACAACCCCGCCACAATGGAGCCCTACAT
CCGTGATCTCCGCAGTAAGTCCCAATCCGGGTTGGCGGAGGAGGCCAAGA
ACAAGATGAACGAGAGGAGACGGGCCACCAACGAACGAGTTGCTGCTACG
GACGTCGGCCGAGCTTCTGTGTATCAACATGATGCAATCAACCGCATCGC
CGAAGAGTTTGGTCTCAACAGAAAGCAACGGCTGGCCTTTTTCATCTTTG
GCAACGCTTGGATGGCGAGGAACGGCTCTCCTAACCCGAACGCCTTGCGT
CTGCACGTCAGCGGTGGGGCGGGGTCAGGCAAGAGCTATGTTTTGGCAGC
TATCAACAGCTTGATCGAGTGCCCTGCATTGAAGGGTGTTGTGCAGCCTG
GCGGTTTGCTGACAGTCGCCTTTCAGGGCAAGCAAGCCGCCAGCGTAGGA
GGCTCGACCGTACACTCTGTTTGCGACATTGGTACGCGCCAGAAAGGTAC
GATGGACAAGACGGACGGACAGGCCGGTCTGTCGGCGAACAAGACACAGC
GATGGGCTCAGCTCATGGATGGTGCTATTGCCATGGAGGAGGTTTCGATG
ATTAGTTGCAAGCTCCTTGGGAAAATGCATGAAGCAGCGGTATCTGTGAG
ACCCTCCGGAGCCAGCCTCCCCCACGCCGGTTATATCTGCGTGACCTTCG
GCGACCTCAATCAGCTGGAACCCGTCGGCGCCTTATCCGTTTCGCACGGC
GCTGCGGACTCTACCCGCCTGGACGGCCTTTCCAACACTCAGCGTGTCGG
CCGCGCCAACTTCATGGCAGCGAATGCCTCGGTCGTACTGGATGAGACCA
ACAACAGG
back to top