mRNA_L-elsbetiae_contig9298.18295.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9298.18295.1 vs. uniprot
Match: A0A6H5KID0_9PHAE (Beta_elim_lyase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KID0_9PHAE) HSP 1 Score: 508 bits (1308), Expect = 9.950e-170 Identity = 299/418 (71.53%), Postives = 314/418 (75.12%), Query Frame = 1 Query: 1 VEAAVRGNNACFPVSRLVTVENTHAQRGGKVLPIEFLDDLAVLAQDEGLRVHMDGARLWNAAAATGLPLSRITAGVDSVSVCYSKGLGAPVGSAVAGTEDFISRALRVRKALGGGMRQSGVVAAAALEGLRKQLPRIGEDHANAKRLAQGFYDLGMPSAIDVDPSSVQTNIVLVTVGPDLSDDGVTAAVVCERLKAKGVLAMAIMKGVIRFVTHSQVSSTDIQRTVSMMKEVLEEAGLHPLGISRTARYNAEEPDELEWRSPENPETAAAAAVVRDPTGAPXXXXXXXXXXXANNIVTNGSVTSITEISNAVSGDAGPDSRGFPASSFPDVD---ASSXXXXXXXXXXXXXDSAVDAEGXXXXXXXXXXXXXXAGVGALAAGSXXXXXXXXXGEE------KDEPPPFLEEFEEVELQ 1227 VEAAVRGNN CFPVSRLVTVENTHAQRGGKVLPIEFLDDLAVLAQDEGLRVHMDGARLWNAAAA+ LP SRI AGVDSVSVCYSKGLGAPVGSAVAG+EDFI RALRVRKALGGGMRQSGVVAAAALEGLRK LPRIG+DHANA+RLAQGFYDLGMPSAIDVDPSSVQTNIVLVTVGPDLSD+GVTAAVVCERLK KG+LAMAIMKGVIRFVTHSQVS DIQRTVSMMKEVLEEAGL+PL +SRT RYNAE DELEW SPEN E AAAA X N IV ++EISNAVSGDAGPDSRGFP SSF DV + +A AEG AG G+ AG GEE DE PPF+E+FEEVELQ Sbjct: 212 VEAAVRGNNPCFPVSRLVTVENTHAQRGGKVLPIEFLDDLAVLAQDEGLRVHMDGARLWNAAAASDLPPSRIAAGVDSVSVCYSKGLGAPVGSAVAGSEDFIKRALRVRKALGGGMRQSGVVAAAALEGLRKHLPRIGDDHANARRLAQGFYDLGMPSAIDVDPSSVQTNIVLVTVGPDLSDEGVTAAVVCERLKDKGILAMAIMKGVIRFVTHSQVSGPDIQRTVSMMKEVLEEAGLNPLVVSRTPRYNAE--DELEWHSPENVE-AAAAXXXXXXXXXXXAASPDQLGGTVNGIVDGDEAVIVSEISNAVSGDAGPDSRGFPDSSFTDVKTVVSPEMGSGSATTAELSTSTAAGAEG--------------AGGGSAEAGLEAGGGADGVGEEGAEDDDNDELPPFVEKFEEVELQ 612
BLAST of mRNA_L-elsbetiae_contig9298.18295.1 vs. uniprot
Match: A0A836CDC2_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDC2_9STRA) HSP 1 Score: 235 bits (599), Expect = 5.870e-67 Identity = 119/237 (50.21%), Postives = 169/237 (71.31%), Query Frame = 1 Query: 1 VEAAVRGNNACFPVSRLVTVENTHAQRGGKVLPIEFLDDLAVLAQDEGLRVHMDGARLWNAAAATGLPLSRITAGVDSVSVCYSKGLGAPVGSAVAGTEDFISRALRVRKALGGGMRQSGVVAAAALEGLRKQLPRIGEDHANAKRLAQGFYDLGMPSAIDVDPSSVQTNIVLVTVGPDLSDDGVTAAVVCERLKAKGVLAMAIMKGVIRFVTHSQVSSTDIQRTVSMMKEVLEEAG 711 + AAVRG N +P++RL+ +ENTH GG+VL ++D + +A GLR+H+DGARLWNAAAA G+P + + DSVSVC+SKGLGAP GSAVAG+ DF++RA R RKALGGGMRQ+GV+AAAA E ++ LPR+GEDH NA+ LA G L +P + D ++V+TNIV+ VGP L+ G+ A+ V + L +GVLA+A+ +RFVTH +++ D+ R ++++++ L G Sbjct: 129 IAAAVRGANIHYPITRLIALENTHNGCGGRVLTPAYMDAVGAIAVRTGLRLHVDGARLWNAAAALGVPPAALARSADSVSVCFSKGLGAPAGSAVAGSADFVARARRARKALGGGMRQAGVLAAAAREAVKHGLPRLGEDHKNARLLADGIAALDVPDFLRCDAAAVETNIVMCEVGPALTKKGLGASDVVDALAKRGVLAVAMTDATVRFVTHYHITAGDVARALALLRKALSSLG 365
BLAST of mRNA_L-elsbetiae_contig9298.18295.1 vs. uniprot
Match: A0A1D8K4B1_9GAMM (Threonine aldolase n=1 Tax=Acidihalobacter aeolianus TaxID=2792603 RepID=A0A1D8K4B1_9GAMM) HSP 1 Score: 212 bits (540), Expect = 7.930e-62 Identity = 116/236 (49.15%), Postives = 161/236 (68.22%), Query Frame = 1 Query: 1 VEAAVRGNNACFPVSRLVTVENTHAQRGGKVLPIEFLDDLAVLAQDEGLRVHMDGARLWNAAAATGLPLSRITAGVDSVSVCYSKGLGAPVGSAVAGTEDFISRALRVRKALGGGMRQSGVVAAAALEGLRKQLPRIGEDHANAKRLAQGFYDLGMPSAIDVDPSSVQTNIVLVTVGPDLSDDGVTAAVVCERLKAKGVLAMAIMKGVIRFVTHSQVSSTDIQRTVSMMKEVLEEA 708 VEAA+R +N +PVSRL+ +ENTH + GG+VL ++++D A LA GLR+H+DGAR+WNAA A G+ +R+ AG DSVS C SKGL APVGS VAG DF+ RA R+RKALGGGMRQ+GV+AAA + L + + R+ EDH NA+RLA+G L + + P++V+TN+V DL++ V A +C+ L A+G+L IR VTH VS+ D++RT++ + E L A Sbjct: 123 VEAAIRVDNDHYPVSRLIALENTHNRCGGRVLGVDYMDAAAELAHSRGLRLHVDGARIWNAAVALGVSPARLLAGADSVSACLSKGLSAPVGSVVAGDRDFVRRARRLRKALGGGMRQAGVIAAAGIVALEEMVDRLAEDHTNARRLAEGLAAL---DGVYLSPTAVETNLVYF----DLAE--VDAPTLCDALAARGILMSPTGTTGIRAVTHRHVSAADVERTLAAVAETLRAA 349
BLAST of mRNA_L-elsbetiae_contig9298.18295.1 vs. uniprot
Match: A0A2M8Q8P2_9CHLR (Threonine aldolase (Fragment) n=1 Tax=Candidatus Thermofonsia Clade 3 bacterium TaxID=2364212 RepID=A0A2M8Q8P2_9CHLR) HSP 1 Score: 206 bits (525), Expect = 4.200e-61 Identity = 112/230 (48.70%), Postives = 163/230 (70.87%), Query Frame = 1 Query: 10 AVRGNNACFPVSRLVTVENTHAQRGGKVLPIEFLDDLAVLAQDEGLRVHMDGARLWNAAAATGLPLSRITAGVDSVSVCYSKGLGAPVGSAVAGTEDFISRALRVRKALGGGMRQSGVVAAAALEGLRKQLPRIGEDHANAKRLAQGFYDLGMPSAIDVDPSSVQTNIVLVTVGPDLSDDGVTAAVVCERLKAKGVLAMAIMKGVIRFVTHSQVSSTDIQRTVSMMKEVL 699 A+RG++ FPV+RL+ +ENTH + GG+VLP++++D + LA+ GL++H+DGARLWNAA A G +R+ A DSVSVC+SKGL APVGSAVAG+ +FI RA R+RK +GGGMRQ+GV+AAAA+ L + + R+ EDHA+A+RLA G ++ I +DP++V+TNIV D+ G AA + L A+GV +R VTH ++S+ DI+RT+++++ VL Sbjct: 10 AIRGDDEHFPVTRLIALENTHNRCGGRVLPLDYIDAVGALARARGLKLHIDGARLWNAAVALGESPARLVAAADSVSVCFSKGLAAPVGSAVAGSREFIRRARRMRKQVGGGMRQAGVLAAAAIVALEQMVDRLAEDHAHARRLAHGLANI---DGIRLDPATVETNIVYF----DVIKPGWDAAKLSAALAAEGVRMNDTGPYRLRAVTHYEISAADIERTLTIVEAVL 232
BLAST of mRNA_L-elsbetiae_contig9298.18295.1 vs. uniprot
Match: A0A3M1FGL0_9CHLR (Low-specificity L-threonine aldolase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1FGL0_9CHLR) HSP 1 Score: 209 bits (531), Expect = 1.800e-59 Identity = 115/233 (49.36%), Postives = 158/233 (67.81%), Query Frame = 1 Query: 1 VEAAVRGNNACFPVSRLVTVENTHAQRGGKVLPIEFLDDLAVLAQDEGLRVHMDGARLWNAAAATGLPLSRITAGVDSVSVCYSKGLGAPVGSAVAGTEDFISRALRVRKALGGGMRQSGVVAAAALEGLRKQLPRIGEDHANAKRLAQGFYDLGMPSAIDVDPSSVQTNIVLVTVGPDLSDDGVTAAVVCERLKAKGVLAMAIMKGVIRFVTHSQVSSTDIQRTVSMMKEVL 699 VEAA+RG+N +P+SRL+ VENTH + GG+VLP+ ++D + LA GL++H+DGARLWNAA A + +R+ DSVSVC SKGL APVGS VAG+ DFI+RA R+RK LGGGMRQ+GV+AAA + + + + R+ +DHANAKRLAQG L +++DP +V+T+IV+ L+ VT A + L+ +GVL I +R VT+ V+ DI RT+ EVL Sbjct: 214 VEAAIRGDNEHYPISRLIAVENTHNRCGGRVLPVAYMDAVGELAHRHGLKLHVDGARLWNAAVALNVSPARLVQHADSVSVCLSKGLAAPVGSLVAGSRDFITRARRIRKVLGGGMRQAGVLAAAGIVAVTQMVERLADDHANAKRLAQG---LAAMDGVEIDPDTVETDIVIFA----LNRADVTPAQLAAGLRERGVLLSPIGGNRLRAVTNYHVTVADIDRTLVAFAEVL 439
BLAST of mRNA_L-elsbetiae_contig9298.18295.1 vs. uniprot
Match: A0A1A6C4G3_9GAMM (Threonine aldolase n=1 Tax=Acidihalobacter prosperus TaxID=160660 RepID=A0A1A6C4G3_9GAMM) HSP 1 Score: 206 bits (523), Expect = 3.030e-59 Identity = 115/239 (48.12%), Postives = 154/239 (64.44%), Query Frame = 1 Query: 1 VEAAVRGNNACFPVSRLVTVENTHAQRGGKVLPIEFLDDLAVLAQDEGLRVHMDGARLWNAAAATGLPLSRITAGVDSVSVCYSKGLGAPVGSAVAGTEDFISRALRVRKALGGGMRQSGVVAAAALEGLRKQLPRIGEDHANAKRLAQGFYDLGMPSAIDVDPSSVQTNIV---LVTVGPDLSDDGVTAAVVCERLKAKGVLAMAIMKGVIRFVTHSQVSSTDIQRTVSMMKEVLEEA 708 VEAA+R +N +PV+RL+ +ENTH + GG+VL ++++D A LA GLR+H+DGAR+WNAA A G+ +R+ AG DSVS C SKGL APVGS VAG DFI RA R+RKALGGGMRQ+GV+AAA + L + + R+ EDHANA+ LA G L + +DP++VQTN+V L GPD D C L+ +GV A +R V H V + + RT++ + E L A Sbjct: 126 VEAAIRADNDHYPVTRLIALENTHNRCGGRVLGVDYMDAAAALAHARGLRLHVDGARIWNAAVALGVSPARLLAGADSVSACLSKGLSAPVGSVVAGDRDFIRRARRLRKALGGGMRQAGVIAAAGIVALEEMVERLAEDHANARLLANGLAAL---DGVRIDPTAVQTNLVYFELARPGPDAGD-------FCAALERRGVRMGATSATGVRAVIHRHVHAAAVDRTLAAVAETLRAA 354
BLAST of mRNA_L-elsbetiae_contig9298.18295.1 vs. uniprot
Match: A0A834LF64_RHOSS (Beta_elim_lyase domain-containing protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LF64_RHOSS) HSP 1 Score: 206 bits (523), Expect = 6.420e-59 Identity = 106/235 (45.11%), Postives = 162/235 (68.94%), Query Frame = 1 Query: 1 VEAAVRGN--NACFPVSRLVTVENTHAQRGGKVLPIEFLDDLAVLAQDEGLRVHMDGARLWNAAAATGLPLSRITAGVDSVSVCYSKGLGAPVGSAVAGTEDFISRALRVRKALGGGMRQSGVVAAAALEGLRKQLPRIGEDHANAKRLAQGFYDLGMPSAIDVDPSSVQTNIVLVTVGPDLSDDGVTAAVVCERLKAKGVLAMAIMKGVIRFVTHSQVSSTDIQRTVSMMKEVL 699 +EAA+R + C+P +RL+ +ENTHA GG+ LP+E++D + LA GL++H+DGAR+++A+ A G+P+ R+ DSVSVC SKGLGAPVGS + G++ FI+RA +RK LGGGMRQ GV+ AAAL GL++ + ++ DH NAK LA+G + + VD +SV+TNIV + L++ V+ +C+ L+ +G+L M++ +R V H Q+S+TD+Q T+S +KE + Sbjct: 146 IEAAIRDRKMDICYPTTRLICLENTHANSGGRCLPVEYIDKVGELATKYGLKLHIDGARIFHASVALGVPVHRLVQAADSVSVCLSKGLGAPVGSVIVGSKGFIARAKTLRKTLGGGMRQVGVLCAAALVGLQENVAKLERDHKNAKTLAEGLNKI---KGLKVDVASVETNIVYFDI---LNNAYVSTEKLCKNLEERGILVMSLNSSRVRLVVHHQISTTDVQYTLSCIKEAM 374
BLAST of mRNA_L-elsbetiae_contig9298.18295.1 vs. uniprot
Match: A0A1D8IS37_9GAMM (Threonine aldolase n=1 Tax=Acidihalobacter yilgarnensis TaxID=2819280 RepID=A0A1D8IS37_9GAMM) HSP 1 Score: 203 bits (517), Expect = 2.160e-58 Identity = 113/236 (47.88%), Postives = 157/236 (66.53%), Query Frame = 1 Query: 1 VEAAVRGNNACFPVSRLVTVENTHAQRGGKVLPIEFLDDLAVLAQDEGLRVHMDGARLWNAAAATGLPLSRITAGVDSVSVCYSKGLGAPVGSAVAGTEDFISRALRVRKALGGGMRQSGVVAAAALEGLRKQLPRIGEDHANAKRLAQGFYDLGMPSAIDVDPSSVQTNIVLVTVGPDLSDDGVTAAVVCERLKAKGVLAMAIMKGVIRFVTHSQVSSTDIQRTVSMMKEVLEEA 708 VEAA+R +N +PV+RL+ +ENTH + GG+VL ++++D A LA GLR+H+DGAR+WNAA A G+ +R+ AG DSVS C SKGL APVGS VAG DF+ RA R+RKALGGGMRQ+GV+AAA + L + + R+ +DHANA+RLA+G L + + S+VQTN+V DL+ AA C L+ +GV A +R V H VS+ D++R ++++ E L A Sbjct: 123 VEAAIREDNDHYPVTRLLALENTHNRCGGRVLGMDYMDAAAELAHARGLRLHVDGARIWNAAVALGVSPARLLAGADSVSACLSKGLSAPVGSVVAGDADFVRRARRLRKALGGGMRQAGVIAAAGIVALEEMVERLADDHANARRLAEGLAAL---DGVRIASSTVQTNLVYF----DLTRPSPDAADFCAALERQGVRMGATSATSVRAVIHRHVSAADVERVLAIVAEALRAA 351
BLAST of mRNA_L-elsbetiae_contig9298.18295.1 vs. uniprot
Match: A0A7V2JYD2_9BACT (Low-specificity L-threonine aldolase n=2 Tax=Candidatus Acetothermia bacterium TaxID=2053493 RepID=A0A7V2JYD2_9BACT) HSP 1 Score: 201 bits (510), Expect = 2.480e-57 Identity = 110/237 (46.41%), Postives = 155/237 (65.40%), Query Frame = 1 Query: 1 VEAAVRGNNACFPVSRLVTVENTHAQRGGKVLPIEFLDDLAVLAQDEGLRVHMDGARLWNAAAATGLPLSRITAGVDSVSVCYSKGLGAPVGSAVAGTEDFISRALRVRKALGGGMRQSGVVAAAALEGLRKQLPRIGEDHANAKRLAQGFYDLGMPSAIDVDPSSVQTNIVLVTV-GPDLSDDGVTAAVVCERLKAKGVLAMAI-MKGVIRFVTHSQVSSTDIQRTVSMMKEVLEE 705 +E A+R N FP SRL+ +E+TH + GG + E+LD A LA G+ VH+DGARL+NA+ A G+P +++T +DSV +C SKGLGAPVGS + GT FI RALRVRK LGGGMRQ+G++AAA + L K + R+ EDHANA RLA+G + D S V TN+V V G + D + A V+ RL+ +GVLA ++ +R VTH +SS DI+++++ ++ +EE Sbjct: 118 IERAIRPENVHFPTSRLLCLEDTHNRCGGAAIGPEYLDAAARLAHSHGMAVHLDGARLFNASVALGIPAAQLTRSMDSVMICRSKGLGAPVGSVLCGTRSFIDRALRVRKVLGGGMRQAGIIAAAGVYALEKNIDRLKEDHANAARLAEGIDSIPGLRCTSHDGSKVPTNLVYFAVDGAAVGDPSLNADVLSLRLRKRGVLANSLGSSNQMRMVTHIGISSADIEQSIAALRSAMEE 354
BLAST of mRNA_L-elsbetiae_contig9298.18295.1 vs. uniprot
Match: A0A7C1JV65_9CHLR (Low-specificity L-threonine aldolase n=2 Tax=Caldilinea aerophila TaxID=133453 RepID=A0A7C1JV65_9CHLR) HSP 1 Score: 200 bits (509), Expect = 2.740e-57 Identity = 109/231 (47.19%), Postives = 159/231 (68.83%), Query Frame = 1 Query: 7 AAVRGNNACFPVSRLVTVENTHAQRGGKVLPIEFLDDLAVLAQDEGLRVHMDGARLWNAAAATGLPLSRITAGVDSVSVCYSKGLGAPVGSAVAGTEDFISRALRVRKALGGGMRQSGVVAAAALEGLRKQLPRIGEDHANAKRLAQGFYDLGMPSAIDVDPSSVQTNIVLVTVGPDLSDDGVTAAVVCERLKAKGVLAMAIMKGVIRFVTHSQVSSTDIQRTVSMMKEVL 699 +++RG++ FPV+RL+ +ENTH + GG+VLP+ ++D + LA GL++H+DGARLWNAA A G +R+ A DSVSVC+SKGL APVGSAVAG+ ++I RA R+RK +GGGMRQ+GV+AAAA+ L + + R+ EDHA+A+RLA G ++ I +DP++V+TNIV D+ G A + L A GV A +R VTH ++++ DI RT++ ++ VL Sbjct: 121 SSIRGDDEHFPVTRLIALENTHNRCGGRVLPLAYIDAVGALAHARGLKLHIDGARLWNAAVALGESPARLVAAADSVSVCFSKGLAAPVGSAVAGSREWIRRARRMRKQVGGGMRQAGVLAAAAIVALEQMVDRLAEDHAHAQRLAHGLANI---DGIRLDPATVETNIVYF----DVVKPGWDAHKLSAALAAAGVRMNATAPNRLRAVTHYEITAADIDRTLATIEAVL 344 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9298.18295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9298.18295.1 >prot_L-elsbetiae_contig9298.18295.1 ID=prot_L-elsbetiae_contig9298.18295.1|Name=mRNA_L-elsbetiae_contig9298.18295.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=409bp VEAAVRGNNACFPVSRLVTVENTHAQRGGKVLPIEFLDDLAVLAQDEGLRback to top mRNA from alignment at L-elsbetiae_contig9298:497..7180- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9298.18295.1 ID=mRNA_L-elsbetiae_contig9298.18295.1|Name=mRNA_L-elsbetiae_contig9298.18295.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6684bp|location=Sequence derived from alignment at L-elsbetiae_contig9298:497..7180- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9298:497..7180- >mRNA_L-elsbetiae_contig9298.18295.1 ID=mRNA_L-elsbetiae_contig9298.18295.1|Name=mRNA_L-elsbetiae_contig9298.18295.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2454bp|location=Sequence derived from alignment at L-elsbetiae_contig9298:497..7180- (Laminarionema elsbetiae ELsaHSoW15)back to top |