mRNA_L-elsbetiae_contig9286.18289.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9286.18289.1
Unique NamemRNA_L-elsbetiae_contig9286.18289.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9286.18289.1 vs. uniprot
Match: D7G131_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G131_ECTSI)

HSP 1 Score: 343 bits (879), Expect = 9.910e-110
Identity = 178/229 (77.73%), Postives = 186/229 (81.22%), Query Frame = 2 
Query:    5 RSLQVLMSHLAWVYMGVKILSLAVKSFFDREKASERLLPCSGFAGSWVGMKWKSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPPDTESVVVKIINPENNDVAAMAVGSIAPCISAPWWEEVLYRGPXXXXXXXPSLFFSLFFLPLXXXXXXRVFLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 691
            RSLQVL+SHL WVYMGV+ILS+AV+SFFD EK            GSWVGMKW+SNWLWWVVGGYFVSSSLFNMADLANQFLCPLPPDTESVVVKIINPENND+AAMAVGSIAPC++APWWEEVLYRG                             LPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL
Sbjct:  358 RSLQVLLSHLVWVYMGVRILSMAVRSFFDTEK------------GSWVGMKWRSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPPDTESVVVKIINPENNDIAAMAVGSIAPCMTAPWWEEVLYRG---------------------------FLLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 547
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BLAST of mRNA_L-elsbetiae_contig9286.18289.1 vs. uniprot
Match: A0A835YJD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJD5_9STRA)

HSP 1 Score: 263 bits (672), Expect = 1.580e-81
Identity = 136/229 (59.39%), Postives = 162/229 (70.74%), Query Frame = 2 
Query:    5 RSLQVLMSHLAWVYMGVKILSLAVKSFFDREKASERLLPCSGFAGSWVGMKWKSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPPDTESVVVKIINPENNDVAAMAVGSIAPCISAPWWEEVLYRGPXXXXXXXPSLFFSLFFLPLXXXXXXRVFLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 691
            RSLQVL+ HL WV  G  IL   +K FF R K S+           W+ +KW+++WLWWVVGGY+ SS LF MADL NQF+CPLPPDTESVV KIINPE+ND+AA+AVGSIAPC+SAPWWEEVLYRG                             LPALTLYLP   A+P  + LFAAHH+++QAM+PLS+LGLVW+LLY+ SGNLLVT++IH MWNSRVFLGSLLG+
Sbjct:  140 RSLQVLLGHLVWVLAGSAILGNVLKPFF-RTKESK-----------WLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRG---------------------------FMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 329
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BLAST of mRNA_L-elsbetiae_contig9286.18289.1 vs. uniprot
Match: A0A7S2B7Y7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7Y7_9STRA)

HSP 1 Score: 229 bits (583), Expect = 4.550e-69
Identity = 119/231 (51.52%), Postives = 150/231 (64.94%), Query Frame = 2 
Query:    5 RSLQVLMSHLAWVYMGVKILSLAVKSFFDREKASERLLPCSGFAGSWVGMKWKSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPP--DTESVVVKIINPENNDVAAMAVGSIAPCISAPWWEEVLYRGPXXXXXXXPSLFFSLFFLPLXXXXXXRVFLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 691
            RS+QVL+ HL W++ GVKIL   ++ FF  E             G W+ MKW++ WLWWVVGGY+VSS  FN ADL NQF+ P      +E+VV K+INPENND+AAMA+GSIAPC +APWWEEVLYRG                             LP+L +++PL  A+P  + +FAAHHM   +M+PL+ LGLVW++LY+ S NL VTVLIH MWNSRVFLGSLLG+
Sbjct:   75 RSMQVLLGHLVWLFAGVKILGSVLRPFFSDE-------------GGWLSMKWRTRWLWWVVGGYYVSSWAFNCADLLNQFILPEVAFEASETVVAKMINPENNDLAAMAIGSIAPCFTAPWWEEVLYRG---------------------------FLLPSLAIHMPLWLAVPLSAVMFAAHHMQSCSMVPLTALGLVWAVLYIRSRNLFVTVLIHGMWNSRVFLGSLLGI 265
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BLAST of mRNA_L-elsbetiae_contig9286.18289.1 vs. uniprot
Match: A0A0G4G260_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G260_VITBC)

HSP 1 Score: 226 bits (577), Expect = 3.490e-67
Identity = 123/234 (52.56%), Postives = 151/234 (64.53%), Query Frame = 2 
Query:    5 RSLQVLMSHLAWVYMGVKILSLAVKSFFDREKASERLLPCSGFAGSWVGMKWKSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPPDT-----ESVVVKIINPENNDVAAMAVGSIAPCISAPWWEEVLYRGPXXXXXXXPSLFFSLFFLPLXXXXXXRVFLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 691
            RSLQVL+ HL WV  G  IL + ++ FF                GSW  ++W+ +WLWWVVGGY+VSS LFN AD+ NQ +  LPP       ESVV K+INPENND+ A+AVGSIAPC+SAPWWEEVLYRG            F+L               PAL++++P   ALP  + LFA HHM++Q+M+PL+ LGL W +LY+ S NLLVTVLIHAMWNSRVFLGS LGL
Sbjct:  149 RSLQVLLGHLLWVGTGCLILGIGLRPFFPPR-------------GSWYRLQWRRSWLWWVVGGYYVSSLLFNGADVINQLV--LPPSVFQEGGESVVTKMINPENNDILALAVGSIAPCVSAPWWEEVLYRG------------FTL---------------PALSVFMPPWVALPVSAVLFAVHHMSIQSMIPLATLGLAWGILYMLSNNLLVTVLIHAMWNSRVFLGSFLGL 340
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BLAST of mRNA_L-elsbetiae_contig9286.18289.1 vs. uniprot
Match: A0A7S0G3A2_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G3A2_9RHOD)

HSP 1 Score: 213 bits (542), Expect = 3.540e-61
Identity = 111/230 (48.26%), Postives = 144/230 (62.61%), Query Frame = 2 
Query:    5 RSLQVLMSHLAWVYMGVKILSLAVKSFFDREKASERLLPCSGFAGSWVGMKWKSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPP-DTESVVVKIINPENNDVAAMAVGSIAPCISAPWWEEVLYRGPXXXXXXXPSLFFSLFFLPLXXXXXXRVFLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 691
            R+ +VL+ HL WVYMGVKIL   +K FF  +             G W+G   KS+W+WW +GGY+ SS LFN AD+ NQ + P    + E+VV K++NPENND+ AM +GS+ PC+SAP +EE+LYRG                             LP L  Y+P+  A+PA S LFAAHH+N+  +LPLSVLG  W+++Y +S NLL T+LIHAMWNSRVFLGSLLGL
Sbjct:  219 RAWKVLLGHLMWVYMGVKILGQQLKPFFPPK-------------GKWIGFSVKSSWVWWSIGGYYASSFLFNCADIVNQLVIPQSLFNEETVVSKLVNPENNDLVAMLIGSLGPCVSAPVFEEILYRG---------------------------FLLPTLLCYMPMHFAIPASSVLFAAHHLNICGVLPLSVLGFAWAIIYTFSRNLLTTILIHAMWNSRVFLGSLLGL 408
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BLAST of mRNA_L-elsbetiae_contig9286.18289.1 vs. uniprot
Match: A0A7S1XHH8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHH8_9RHOD)

HSP 1 Score: 211 bits (537), Expect = 7.060e-61
Identity = 113/230 (49.13%), Postives = 143/230 (62.17%), Query Frame = 2 
Query:    5 RSLQVLMSHLAWVYMGVKILSLAVKSFFDREKASERLLPCSGFAGSWVGMKWKSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPP-DTESVVVKIINPENNDVAAMAVGSIAPCISAPWWEEVLYRGPXXXXXXXPSLFFSLFFLPLXXXXXXRVFLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 691
            R+ +VL+ HL WVYMG++IL+  +  FF  +             G+W+  KW +NWLWW +GGY VS+ LFN AD+ NQF+ P      ESVV K++NPEN D+ AM +GSI PC+SAP +EEVLYRG                             LPALT + PL  A+P  S LFA HH+NL  +LPLSVLGL W+++Y  S NL+VT+LIHAMWNSRVFL SLLGL
Sbjct:  181 RAWKVLLGHLMWVYMGIRILNRRLSPFFPPK-------------GTWLRWKWNANWLWWSIGGYAVSALLFNCADVVNQFILPSSVFSEESVVNKLVNPENRDLFAMGIGSIGPCMSAPIFEEVLYRG---------------------------FLLPALTAFFPLSLAIPVSSVLFAIHHLNLSGVLPLSVLGLAWAIIYTQSRNLVVTILIHAMWNSRVFLVSLLGL 370
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BLAST of mRNA_L-elsbetiae_contig9286.18289.1 vs. uniprot
Match: A0A5J4Z7C3_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7C3_PORPP)

HSP 1 Score: 213 bits (543), Expect = 8.610e-61
Identity = 117/232 (50.43%), Postives = 147/232 (63.36%), Query Frame = 2 
Query:    5 RSLQVLMSHLAWVYMGVKILSLAVKSFFDREKASERLLPCSGFAGSWVGMKWKSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPPDT---ESVVVKIINPENNDVAAMAVGSIAPCISAPWWEEVLYRGPXXXXXXXPSLFFSLFFLPLXXXXXXRVFLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 691
            R+ +VL+ HL WVYMG KIL   +K FF  E             G W+ +++K NW WW +GGY+VS+ LFN+ADL NQ +  LPP     E+VV K+INPEN D+ AMA+GSI PC++AP +EEVLYRG                             LPAL  YLPL A+LP  S LFAAHH+N   M+PL+VLGL W++LY  S N+LVT++IHAMWNSRVFLGSL+GL
Sbjct:  262 RAWKVLLGHLMWVYMGCKILDQQLKPFFPPE-------------GQWLRLEFKENWGWWAIGGYYVSALLFNIADLVNQLV--LPPSIFNGETVVSKLINPENRDMLAMAIGSIGPCVTAPVFEEVLYRG---------------------------FLLPALVFYLPLWASLPISSVLFAAHHLNPGGMIPLTVLGLAWAILYTRSRNVLVTIIIHAMWNSRVFLGSLIGL 451
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BLAST of mRNA_L-elsbetiae_contig9286.18289.1 vs. uniprot
Match: A0A7S0ZEY9_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEY9_9RHOD)

HSP 1 Score: 213 bits (543), Expect = 9.710e-61
Identity = 118/232 (50.86%), Postives = 146/232 (62.93%), Query Frame = 2 
Query:    5 RSLQVLMSHLAWVYMGVKILSLAVKSFFDREKASERLLPCSGFAGSWVGMKWKSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPPDT---ESVVVKIINPENNDVAAMAVGSIAPCISAPWWEEVLYRGPXXXXXXXPSLFFSLFFLPLXXXXXXRVFLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 691
            R+ +VL+ HL WVYMG+KIL   +  FF  +             G W+ +K+K NW WW +GGY+VS+ LFN+ADL NQ +  LPP     E+VV K+INPEN D+ AMA+GSI PCI+AP +EEVLYRG                             LPAL  YLP+ A LP  S LFAAHH+N   M+PL+VLGL W++LY  S NLLVT++IHAMWNSRVFLGSLLGL
Sbjct:  273 RAWKVLLGHLMWVYMGLKILDQRLHPFFPPK-------------GKWLRLKFKENWGWWALGGYYVSALLFNIADLVNQLV--LPPSVFNDETVVSKLINPENRDLVAMAIGSIGPCITAPVFEEVLYRG---------------------------FLLPALIFYLPISAGLPISSVLFAAHHLNPGGMIPLTVLGLAWAMLYTKSRNLLVTIVIHAMWNSRVFLGSLLGL 462
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BLAST of mRNA_L-elsbetiae_contig9286.18289.1 vs. uniprot
Match: A0A2V3IW85_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW85_9FLOR)

HSP 1 Score: 211 bits (538), Expect = 4.450e-60
Identity = 116/231 (50.22%), Postives = 144/231 (62.34%), Query Frame = 2 
Query:    2 SRSLQVLMSHLAWVYMGVKILSLAVKSFFDREKASERLLPCSGFAGSWVGMKWKSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPP-DTESVVVKIINPENNDVAAMAVGSIAPCISAPWWEEVLYRGPXXXXXXXPSLFFSLFFLPLXXXXXXRVFLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 691
            +R+ +VL+ HL WVYMG+ IL               RL P     G+W+  KW+SNWLWW +GGY+VS+  FN+AD+ NQ L P    + E+VV K+INPEN D  AMA+GSI PC+SAP +EEVLYRG                             LPAL  +LP+ AA+PA S LFA HH+N   +LPLS+LG +W++LY  S NL VTVLIHAMWNSRVFLGSLLGL
Sbjct:  259 TRAWKVLLGHLMWVYMGIAIL--------------RRLKPFFPPKGTWLRWKWRSNWLWWAIGGYYVSAMFFNVADVLNQLLLPASLFEEETVVSKLINPENKDRVAMAIGSIGPCVSAPVFEEVLYRG---------------------------FLLPALACFLPMWAAIPASSVLFAIHHLNPTMILPLSMLGFIWAILYSKSRNLTVTVLIHAMWNSRVFLGSLLGL 448
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BLAST of mRNA_L-elsbetiae_contig9286.18289.1 vs. uniprot
Match: A0A7S1TMS2_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TMS2_9RHOD)

HSP 1 Score: 211 bits (536), Expect = 6.710e-60
Identity = 118/232 (50.86%), Postives = 143/232 (61.64%), Query Frame = 2 
Query:    5 RSLQVLMSHLAWVYMGVKILSLAVKSFFDREKASERLLPCSGFAGSWVGMKWKSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPP---DTESVVVKIINPENNDVAAMAVGSIAPCISAPWWEEVLYRGPXXXXXXXPSLFFSLFFLPLXXXXXXRVFLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 691
            R+ +VL+ HL WVYMG+ IL   +K FF  E             G W+  K+K NW WW +GGY+ S+ LFN+ADL NQ +  LPP   + E+VV K+INPEN D+ AMA+GSI PCI+AP +EEVLYRG                             LPAL  Y PL  ALP  S LFA HHMN   M+PL+VLGL W++LY  S NLLVT++IHAMWNSRVFLGSLLGL
Sbjct:  249 RAWKVLLGHLMWVYMGLTILDKRLKPFFPPE-------------GKWLRCKFKENWGWWALGGYYFSALLFNIADLVNQLV--LPPSIFNDETVVSKLINPENRDLVAMAIGSIGPCITAPVFEEVLYRG---------------------------FLLPALIFYFPLPVALPVSSVLFAVHHMNPGGMIPLTVLGLAWAILYAKSRNLLVTIVIHAMWNSRVFLGSLLGL 438
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9286.18289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G131_ECTSI9.910e-11077.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YJD5_9STRA1.580e-8159.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2B7Y7_9STRA4.550e-6951.52Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A0G4G260_VITBC3.490e-6752.56Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S0G3A2_9RHOD3.540e-6148.26Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
A0A7S1XHH8_9RHOD7.060e-6149.13Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4Z7C3_PORPP8.610e-6150.43Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S0ZEY9_9RHOD9.710e-6150.86Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A2V3IW85_9FLOR4.450e-6050.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1TMS2_9RHOD6.710e-6050.86Hypothetical protein n=1 Tax=Erythrolobus australi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9286contigL-elsbetiae_contig9286:296..6980 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size1299
Cds size741
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9286.18289.1prot_L-elsbetiae_contig9286.18289.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9286 296..6424 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816999.315371-CDS-L-elsbetiae_contig9286:295..4311622816999.315371-CDS-L-elsbetiae_contig9286:295..431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9286 296..431 +
1691683972.490341-CDS-L-elsbetiae_contig9286:295..4311691683972.490341-CDS-L-elsbetiae_contig9286:295..431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9286 296..431 +
1622816999.329525-CDS-L-elsbetiae_contig9286:1037..10781622816999.329525-CDS-L-elsbetiae_contig9286:1037..1078Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9286 1038..1078 +
1691683972.504382-CDS-L-elsbetiae_contig9286:1037..10781691683972.504382-CDS-L-elsbetiae_contig9286:1037..1078Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9286 1038..1078 +
1622816999.342898-CDS-L-elsbetiae_contig9286:2474..26811622816999.342898-CDS-L-elsbetiae_contig9286:2474..2681Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9286 2475..2681 +
1691683972.5150938-CDS-L-elsbetiae_contig9286:2474..26811691683972.5150938-CDS-L-elsbetiae_contig9286:2474..2681Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9286 2475..2681 +
1622816999.355577-CDS-L-elsbetiae_contig9286:4765..49401622816999.355577-CDS-L-elsbetiae_contig9286:4765..4940Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9286 4766..4940 +
1691683972.523427-CDS-L-elsbetiae_contig9286:4765..49401691683972.523427-CDS-L-elsbetiae_contig9286:4765..4940Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9286 4766..4940 +
1622816999.3689053-CDS-L-elsbetiae_contig9286:6242..64241622816999.3689053-CDS-L-elsbetiae_contig9286:6242..6424Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9286 6243..6424 +
1691683972.53345-CDS-L-elsbetiae_contig9286:6242..64241691683972.53345-CDS-L-elsbetiae_contig9286:6242..6424Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9286 6243..6424 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816999.3795748-UTR-L-elsbetiae_contig9286:6424..69801622816999.3795748-UTR-L-elsbetiae_contig9286:6424..6980Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9286 6425..6980 +
1691683972.5498507-UTR-L-elsbetiae_contig9286:6424..69801691683972.5498507-UTR-L-elsbetiae_contig9286:6424..6980Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9286 6425..6980 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9286.18289.1

>prot_L-elsbetiae_contig9286.18289.1 ID=prot_L-elsbetiae_contig9286.18289.1|Name=mRNA_L-elsbetiae_contig9286.18289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=247bp
VQIPPGPDESSGVGLHGRQDLEPRGEVLLRQREGERTTPSLFRFCWILGR
NEMEVQLAMVGGRRVLRVVVAVQHGRPGEPIPVPPAARHGVGGGEDHQPR
EQRRRGHGRRVHRPVHLGTLVGGGALPRPPPPPPPRAFPFFLPFLSSSPP
PPPPTRFFAGFDPVPSSQGSPPSRVLPLRGASHELTGHAAPQRSGAGVVP
AVPLLRKPARDRPYTRHVEQQSVPRVVVGFVAGYLGGGWTRIGIYR*
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mRNA from alignment at L-elsbetiae_contig9286:296..6980+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9286.18289.1 ID=mRNA_L-elsbetiae_contig9286.18289.1|Name=mRNA_L-elsbetiae_contig9286.18289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6685bp|location=Sequence derived from alignment at L-elsbetiae_contig9286:296..6980+ (Laminarionema elsbetiae ELsaHSoW15)
GTCCAGATCCCTCCAGGTCCTGATGAGTCATCTGGCGTGGGTCTACATGG
GCGTCAAGATCTTGAGCCTCGCGGTGAAGTCCTTCTTCGACAGAGAGAAG
GCGAGCGAACGACTCCTTCCTTGTTCCGGTTTTGCTGTTGTTTGTCATTG
TTGTGGCGGTGTGTTGTTGTTGTGGGCCTTGGAGTTTTGATCCGCTAGGC
AGGCCGGTCCACGGGGATTTGGGGGGTTGTGTGCCGCAAGCATGGTATAT
ACGTGTGTGCGATAATTAGGCCTGCGACGGCGGGTGCCCCCCGGTCGGTC
TTTTCTGTCTCGTTTGTCGGTATTTGCACGCACACGCCCCCCCCTTTCGC
TGGAATTCAGGCGGGCCAGCCAATGGGCGTGCGCGGGTGTCCGTCGATCC
CTGTCCGGTCCGTTGCCGGAGCTGCCGATGTACTCGTAAATAGGTGGCTT
TTCGTCGTTACATACCTGCTGCCCTGACTCACTGGTTTGGTGGGTGCCAC
CGCACTCCTTGGTCGTGCGCGTCATCCCATACCTTTCGGTCTTGACTTTC
CGGCCTTAATTCGTTCTTCCCTTCAGCCAGCACAACCGCCCCCGCGACCA
CCTTTCACCCCCCCCCACACCCCCAACCCCCCCCACACCCCCTTCACGAA
GAATTTAATTTCCCACCCCACCTTGTTTTTGCCGCCCATGTTCGCCGCCG
CCGACGACGACGGTTCTGCCTATTCCTAAATTGGCGCCCCAGGGATCCTG
GGTCGGAATGAAATGGAAGTCCAACTGGCTATGGTGAGCGAATTTGGTTA
TGTTGGTTCTTGTCCGATTTTTTTTTTCGGGGGGGAGAGGGGGGCGCGTT
TTGTTGCTGTATTGGCTGATTAGATGGCGCACGAGCTTCTCACTGCTGTA
CGCCAGCCACTCTCCCACGTGTTAAGGTCTCCCACCTTGTATTCAGTTAT
AATTTTTGCACTAAATTAAACACATACTTCGAAGTTATGTATCAGCGTGA
ATCGGACCTCTCCCAGCCTTGGCAAGTCCGATGAGAAGAACCGGTGGGGC
CTGGCGTTAAGGGCTCTCTTTCCGGTGTGATGATGTTTTGTGTTTTCCCC
GTACATCAGCATACAGCACAAAATCATGAGTGCTAGAGGTGTCGAATTGC
AACGCAGCAATATGTGCGGCGCAATCATCTCACGAGAGACAAGCGCGGCG
CCGGTAACGCGGTTGCCGTAAAAAGTTTCCTTTTTGCTTTGACTTTTTGG
GGGCGCAGTTTGCCGCGTCATGCGTGTGCCCCTCGTGCGGAAGATCTCTG
TCAACCAAGGGTCGGCCCCCTATGGCTCGCTCGCTGGCTGGCTGGTCTGG
GAGAACCCGACAGGCGTGTATCTTTCGTGCGTGGGGGCCCGTGGGATGTT
TCACCCTGGCTTTCCTACACGATCACGCTCGTATCAGGTTTAGACGACGG
GCATACATAAATTTCGCGCGTGGAAGTCCGTCAGCATGCTTCACCCTGAC
ATGTTTCTCCACGATCACGCTCGTATCAGGTTTAGACGACGGGCATGCAT
ATATTTCGCGCATGGGAGGTCCATAAGGACGTTTCGCCATGATGTTTGAC
CACGATCACGCTCGTGCTAAGTTTAGGCGAGGGAGCGCACGCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCACCCCCCACCCCCCCCCCCCCCTCCACCCACCCCCATGATG
TTTGACCACGATCACGCTCGTGCTAAGTTTAGGCGAGGGAGCGCCCGCCC
CCCCCCCCCTCCCCCCTCCCCTCCGCCCGCCCGCCCGCCCGCTGACTCTC
AATCGATCTACACGGCCGGCGCGAGCCGCGTTGTGTTTTCGCCGTTCGGT
GTACACGTAATTTTTAAACCATCGTTTTCATTTTTTTTTTCAAGAAAAAC
AGTTTATCAAAAATGGAACCTTACCCACATTGAGACGGAGACTCCGTCAG
ATTCAATCGGTGTTCCATATATTGGGCCGGCCGAGTATAAAAACACCTAA
AATATAAGAAGAATTCACCATCTCCCCTGCATCTCTGCCAGGTCAAACCA
CATGCATTCATTCCGGGGAGAAACCCTCCGTGATTTTTTTCTTTCCCTCT
TTCCTGTCTTTTCCCTTGGCCAAAAAAAGGTGGGTGGTCGGCGGGTACTT
CGTGTCGTCGTCGCTGTTCAACATGGCCGACCTGGCGAACCAATTCCTGT
GCCCCCTGCCGCCCGACACGGAGTCGGTGGTGGTGAAGATCATCAACCCC
GAGAACAACGACGTCGCGGCCATGGCCGTCGGGTCCATCGCCCCGTGCAT
CTCGGCACCCTGGTGGGAGGAGGTGCTCTACCGCGGGTGAGCAGGTTAGG
TATGCGGGGGGGGCGCGCGCGCGGGGAGGGGGGGGGGGCGTTTGCTAGTC
AACCAACGCAGCTGACTTTGCTATATATCTGCCTGCGGCAGGCAGTACGC
GAGAGGCCGGTGGATGTGGCGACGACCGCCCACCACGTCTAGGCCGCTGC
AATGGTTCGATTCGAAAACGAAGCACGAAGCACAAAGGGGTAGGCGGGGG
CAGCAAGCCAGGCAGGCAGTTTGCTGTCGTGGGTAAGGTGGCGACAGAGA
AGTAGTAGCCGGCTGAGACATGGGGGTGGGAGCACCTATATGGGGCACGC
CGCGCTTTTGTCCATATTTTTTTCGCCTCGGTGTTCACCAATTTTCCTGC
TATTTTCCTGTTTTTTTTTTCTATGTACATAGAAGTATGCACTTACGGAA
CCCGTTGCGCAGTGCTTCAGTTGGTTGCGCGTTTCATTATGTACGGTGGC
AAGGTACGGTAAGACCTGGAGGAGAGTACACTGCGGCCGTAACGGCCGCG
GTCTTGATCGTGATGCGCGTCTCGGTCTCCTCCCCTCGCCTGGGGGGAGG
TTTGCTCTCTTCCGACCGTGGGTGCGCTGTGCCTGTACACTGCTGCTGCT
GCCGCGACTCATGGCGCGGGATTCGCAAAGCGTAAATTACCGTTGTACTT
GTAGTACATACACGCTTTTGCTTATTTTCTTTGAATGGTTGCTTTACTGC
CCGCAGACATGCATATGCCTACAGCCAGATTCCGCAAACGTGTGTGTGAT
TTTGTTCTTTCTGTTGTCGTGCTTGTGCTTTGTGCGAAGGAGATCGATCG
AAGCTTTTGTCTTGTCTTTTGTGGGTGGTTGTTTGTGACGAAAATATACT
TCGTATATACATATACGAAGTATGTGCAAGGTGTGGCCGCTTACGCAGCC
CCCTTGATTGCAAGCGAGTCCAAGGCAATGATAAATATCTACTTCCTTCC
TATAAAATAATGCTGCTGCTGTTGTCGAACGGAGTGTAGGTGTGTGTGGA
ATAGAAACACTAACCAACAGCAGCATCAATTGCTTTTTATGCTTCCGAAA
AAACACGCGCCAGCAGGGAGGCCAATGCATACGTCTCCACCAGCGACCTC
TATGTAGAGTGCACATGGAGAGGAGGCGCAAGCAGAACTGCTGCCCTCTT
TGTTTGACGGCGCTGCCGCGAGTGTATCCGCGCGTGTGCACACAACAAAT
ACGCATCATATATAGTCTGAGGGAACACGCCGGAAAGCAGTGGCACCAAT
ATAGTGCGGCTCCAGTGACACGAATAATGACCCGCGCGCCCCTTGGGCGA
GAAGTCATAAAATAAATGTAACTGCTCTGCATACATATCTCAGCGCGAGA
AGAGAGAAAGAGACAGAGAGATAAGAGAGAAAATATGACTAACAGCCGAG
GGTGTGTAGCAGTAGGGAGGGTGTGTAGCAGAAGGGAGGGTGTGTAGCAG
AAGGGAGGGTGTGTAGCAGTAGGGAGGGTGTGTAGCAGAAGGGAGGGTGT
GTAGCAGAAGGGAGGGTGTGTAGCAGTAGGGAGGGTGTGTGTGTGAGAGA
GAGATGGAAAGCGGTGCAGCCCTTTTGGCGAGCAAGCTCAGGTTTTCAAA
AATCAAACTGCTCCCAAAGGCCAAGAAATCCGGCTCTCTGACGCTATGCA
CAGCAGTTCGAAGAGACAAAGAGAGACAGAGAGAGGAGGGTTGACTGTGG
AGGGTGTGTAGCAGTAGGGGGTGGTCAGAGAGAGAGAGAGAGATAAAGAG
AGAGGCGGGAAGCGGTGCACAGCCCTTTACAGAGCGAGCGGAGGAGCGTT
CAAGATTTCAAATTCCCGCCCCAACGGGTCACAAATGGAGACCGCACAGG
GCTTCAAAAGTCCGAAATACTGCGCTCACAGGCGTCGAGAGGCGGTGAAA
TGCACCGATCTCAGAAAAAAGTTAAATCTTAAAAGATTTATGTGCATACA
TGGCGTCCGTTCTTATTTCGTTGGCTACATATATATTTACAGCAGTGTCG
ATTTTGGTTCGTGGCCGTCCGTTCCCAGGTTTTTGGGTTCGTATTGTAGC
TCCAGCCGCCCTTCTCTCAGCCCCCCCCCCCCCCCCCCCCCCGTGCCTTC
CCTTTTTTTCTCCCTTTTCTTTCTTCCTCTCCCCCCCCCCCCCCCCCCAC
GCGTTTTTTTGCCGGCTTTGACCCTGTACCTTCCTCTCAAGGCAGCCCTC
CCAGCCGGGTCCTTCCTCTTCGCGGCGCATCACATGAACTTACAGGTAGT
GTTTTTTGGCAAAACAATGTGCGGCTTGCTACTTTTGCCGCTATTTTCAC
GTGGTGAAGCCGGGGTGGTCGGATCGGACGTTTTGTTTTGTCATGTTTTG
GTTCCCTTGCGTCTTTTTTCGTACAGCCGGGGAGCGAGCGGCAGGTGGCA
CAGGGGGGGGGGGGGGGGGGGGGGGGGTATTCTTTGATTTTCGGAGCGTT
AAATAGGTGTTTACATTGCTGGCCACGCGCGCATCTCACCCGAGCCGGAG
TACGGTTCCAATCCTTCCTCTTTATCTCTAGCATAATGTTGCGGTTCACT
TCCCGAGGGTTGACGATTCGCCGCGAGATTTATTTATGTAGGAATGTCGT
TGTTGTTTCAGCTCGCCTGCGTATCTTGTACCTCCCGTGCTCTTCGCGGG
TAAAAGAGTACACAGTACATAAGCGTGTCGCTCATCAGTCTTCATCCTTT
CCGCGTTTGTCTTATTTACACTCCAGCTGAATCTGAACGCTCTTCTTCCT
GCTGGGTTGATTCTGCGAGACTCCTCTGCAAACGCACCGTCTTGACATTT
TGTTTGCCGCGCGCCTCCCAATTTCGTGGACCATGTCCCCGGTTCCTGCT
CTATTTACCCGGGCAACGCTGCAATGCTCGTCATGTTTCCATATCGATTG
GCCGACCGATGCGTCTACCATTGTTCGCACGTAAATACATAGTTCATCTG
GTAAGTGGAGCCCACAGCCTACCCCACTGAAATCCGGGTTTTACTCCAAT
CGGCTATTTTACTTGGAAGTAGTTACACACGAGGGTGCGCGAACGATTTT
TTCATGAGAAAAAGGGTGTGCGGTCACTTGGGTCCATCTAGATCCCCCTT
TTCCGCCCCGCGATTTTATGTCTCTGGCACGCTGCACCTCAGTCGTCCTC
GTACATATGTACGTACGATTTGTTCTCGGGAAGTGTTCGCCACAGTCCGT
CGTTGAGAGTGCAGATGACTTCCTCCTGCCCGGCCCGCCCGCCCCTCCCT
TCTACCCGGAAAAGTGTGTGTAGCTGCTGTGTGCTCTTTTTTTCCATTTA
TTTTTGTCGCAGACGTACAGACATATTTAGCGTGAGGAATTATCTGAAAG
GCCGGTAAACATGTGGATATCCGTATATACATAAAAGTATATAAAAATAA
ATAAAAACAAATAAAGGCCCGCTGTCGACTTATTGTTTCACACGATCTGA
TGAAAAAGGACGCGCGTCTGTTATGTCCCACCTTCCACCCCCGGCAAATA
ACATGCCGTTTTTGTTTGCGCTGCTGCTCGATCGACCGTTTCGACAGGCC
ATGCTGCCCCTCAGCGTTCTGGGGCTGGTGTGGTCCCTGCTGTACCTCTA
CTCAGGAAACCTGCTCGTGACCGTCCTTATACACGCCATGTGGAACAGCA
GAGTGTTCCTCGGGTCGTTGTTGGGTTTGTAGCCGGGTATTTAGGGGGGG
GCTGGACGCGCATCGGTATCTACCGATAATGGGGGTCGTTGACTAACTGT
CGCCGCGTTGCTAGGCTTGAAGTCTTTCGCGCTGCGGGGGCGCTTTTGAG
GGGGGGCGTTATGCGGAGAGAGAATAAACAATTGGTTTAGGTAGCCTAAA
TATAGATATATAGAGGTGACAGAAATCGGGAAACAAATCCGAGAGCACCC
GATACGTACAAAACTATTTGGTGTTTTCGTGAGCGCCTCTGCACATCGTG
ACTACGTATTCGTCAATAGAAATCTCGAGGAGCAGGATGTAGCAGACCGT
TAAAGTACTGATTTTTTTTTATCTTGTACCAGTACACGGCAGCTGGGTTG
GCAACCAGTTCGGCGTGGTCTCTCCAATGATCCCGTTCAAGCTTTTTAGC
GAAGACTTTGTACTCGTGGTTATAAATTAAATCCATGGATTTAGTTTTCT
CAAGCCAAACGATACAATCCTATAAGGGTAAACCCGCCGCATTTTTAGCC
ATTTTTTTTCCCCCAAAACGCGTCATCCCGTTTTCTCGCCGCTCACGCCC
CCAACGGACGTCTATTTTCGCCGGTGAACGCATGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9286:296..6980+

>mRNA_L-elsbetiae_contig9286.18289.1 ID=mRNA_L-elsbetiae_contig9286.18289.1|Name=mRNA_L-elsbetiae_contig9286.18289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1482bp|location=Sequence derived from alignment at L-elsbetiae_contig9286:296..6980+ (Laminarionema elsbetiae ELsaHSoW15)
GTCCAGATCCCTCCAGGTCCTGATGAGTCATCTGGCGTGGGTCTACATGG
GCGTCAAGATCTTGAGCCTCGCGGTGAAGTCCTTCTTCGACAGAGAGAAG
GCGAGCGAACGACTCCTTCCTTGTTCCGGTTTTGCTGTCCAGATCCCTCC
AGGTCCTGATGAGTCATCTGGCGTGGGTCTACATGGGCGTCAAGATCTTG
AGCCTCGCGGTGAAGTCCTTCTTCGACAGAGAGAAGGCGAGCGAACGACT
CCTTCCTTGTTCCGGTTTTGCTGGATCCTGGGTCGGAATGAAATGGAAGT
CCAACTGGCTATGGGATCCTGGGTCGGAATGAAATGGAAGTCCAACTGGC
TATGGTGGGTGGTCGGCGGGTACTTCGTGTCGTCGTCGCTGTTCAACATG
GCCGACCTGGCGAACCAATTCCTGTGCCCCCTGCCGCCCGACACGGAGTC
GGTGGTGGTGAAGATCATCAACCCCGAGAACAACGACGTCGCGGCCATGG
CCGTCGGGTCCATCGCCCCGTGCATCTCGGCACCCTGGTGGGAGGAGGTG
CTCTACCGCGGGTGGGTGGTCGGCGGGTACTTCGTGTCGTCGTCGCTGTT
CAACATGGCCGACCTGGCGAACCAATTCCTGTGCCCCCTGCCGCCCGACA
CGGAGTCGGTGGTGGTGAAGATCATCAACCCCGAGAACAACGACGTCGCG
GCCATGGCCGTCGGGTCCATCGCCCCGTGCATCTCGGCACCCTGGTGGGA
GGAGGTGCTCTACCGCGGCCCCCCCCCCCCCCCCCCCCCCGTGCCTTCCC
TTTTTTTCTCCCTTTTCTTTCTTCCTCTCCCCCCCCCCCCCCCCCCACGC
GTTTTTTTGCCGGCTTTGACCCTGTACCTTCCTCTCAAGGCAGCCCTCCC
AGCCGGGTCCTTCCTCTTCGCGGCGCATCACATGAACTTACAGCCCCCCC
CCCCCCCCCCCCCCCGTGCCTTCCCTTTTTTTCTCCCTTTTCTTTCTTCC
TCTCCCCCCCCCCCCCCCCCCACGCGTTTTTTTGCCGGCTTTGACCCTGT
ACCTTCCTCTCAAGGCAGCCCTCCCAGCCGGGTCCTTCCTCTTCGCGGCG
CATCACATGAACTTACAGGCCATGCTGCCCCTCAGCGTTCTGGGGCTGGT
GTGGTCCCTGCTGTACCTCTACTCAGGAAACCTGCTCGTGACCGTCCTTA
TACACGCCATGTGGAACAGCAGAGTGTTCCTCGGGTCGTTGTTGGGTTTG
TAGCCGGGTATTTAGGGGGGGGCTGGACGCGCATCGGTATCTACCGATAA
GCCATGCTGCCCCTCAGCGTTCTGGGGCTGGTGTGGTCCCTGCTGTACCT
CTACTCAGGAAACCTGCTCGTGACCGTCCTTATACACGCCATGTGGAACA
GCAGAGTGTTCCTCGGGTCGTTGTTGGGTTTGTAGCCGGGTATTTAGGGG
GGGGCTGGACGCGCATCGGTATCTACCGATAA
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