mRNA_L-elsbetiae_contig9191.18210.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9191.18210.1 vs. uniprot
Match: A0A6H5KZP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP2_9PHAE) HSP 1 Score: 335 bits (859), Expect = 9.940e-102 Identity = 189/386 (48.96%), Postives = 214/386 (55.44%), Query Frame = 1 Query: 94 VVVKTLSGKEIPLAISASETITDVKRQIQDLEGISPDEQRLVFAGKQLEDGRTPSDYKIQEGSTLHLVLRLRGXXXXXXXXVAGL-FADVSDSSGLTERAFSDHAPSWRIARPGLCLEGRCTNELCVAHGKMVILNHDFRDFDLMLPGRDEKKHCPKCEKVVVPSTCGFTGCTWRYRGRKAGETSVLSGRWKEAGGDGYHRFKEGGEGEVEWDRLLIQARPLLLKLEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVAITIDHTWGDCTLCTDGSFPRFHFFSDASLRRVLLQCGHRFHAKCLAGWEKGSMIVCPNCREES 1248 + VKTL+GK + L + + TI D+K+ +QD+EGI PD+QRL+FAG QLEDG T S Y IQ STLHLVLRLRG G F DVSDSSGLTE AFSDHAP WR+A PGLCLEGRCTN C AHG+MVILNH RDFDL+ PGRD K+ CP C VVPSTC FT CTWRY+GRKAGET+VL G WKEAG D YHRF G GEVEWDRLLIQARPLL KLE++ VA IDHTWG C S F + ++ +L CGHRFH +CL GWE+GSMIVCP CREES Sbjct: 272 IFVKTLTGKTVKLVVGSYNTIADIKQMMQDMEGIPPDQQRLIFAGVQLEDGLTISFYNIQGNSTLHLVLRLRGGGFAAPPIAVGAKFVDVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNSDCDAHGRMVILNHGLRDFDLIRPGRDPKR-CPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAG-DSYHRFD--GRGEVEWDRLLIQARPLL-KLEQRVPSAPPADERVERPNTTAISATST--------------------------------------------------------------------VADVIDHTWGRCXXXXXXSA----FGATSASDETVLDCGHRFHTRCLTGWEQGSMIVCPICREES 580
BLAST of mRNA_L-elsbetiae_contig9191.18210.1 vs. uniprot
Match: D7G3U0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U0_ECTSI) HSP 1 Score: 215 bits (547), Expect = 3.670e-61 Identity = 126/285 (44.21%), Postives = 142/285 (49.82%), Query Frame = 1 Query: 406 PSWRIARPG----LCLEGRCTNELCVAHGKMVILNHDFRDFDLMLPGRDEKKHCPKCEKVVVPSTCGFTGCTWRYRGRKAGETSVLSGRWKEAGGDGYHRFKEGGEGEVEWDRLLIQARPLLLKLEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVAITIDHTWGDCTLCTDGSFPRFHFFSDASLRRVLLQCGHRFHAKCLAGWEKGSMIVCPNCREES 1248 PS RPG LCLEGRCTN C AHG+MVILNH FRDFDL+ PGRD K+ CP C + VVPSTC FT CTWRY+GRKAGET+VL G WKEAG D YHRF+EGGE V+WDRLLIQ RPLL KLE++ VA+ IDHTW CT S F + + +L CGHRFH +CLAGWE+GSMIVCP CREES Sbjct: 7 PSRTTPRPGGLPRLCLEGRCTNRQCDAHGRMVILNHAFRDFDLIRPGRDPKR-CPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAG-DSYHRFEEGGE--VQWDRLLIQVRPLL-KLEQRVPSAPPADERMERPNTTANTATST--------------------------------------------------------------------VAVVIDHTWSRCTXXXXXSA----FGATPASDETVLDCGHRFHTRCLAGWEQGSMIVCPICREES 214
BLAST of mRNA_L-elsbetiae_contig9191.18210.1 vs. uniprot
Match: A0A225VQY5_9STRA (Ubiquitin family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQY5_9STRA) HSP 1 Score: 197 bits (502), Expect = 7.850e-53 Identity = 102/221 (46.15%), Postives = 139/221 (62.90%), Query Frame = 1 Query: 94 VVVKTLSGKEIPLAISASETITDVKRQIQDLEGISPDEQRLVFAGKQLEDGRTPSDYKIQEGSTLHLVLRLRGXXXXXXXXVAGLFADVSDSSGLTERAFSDHAPSWRIARPGLCLEGRCTNELCVAHGKMVILNHDFRDFDLMLPGRDEKKHCPKCEKVVVPSTCGFTGCTWRYRGRKAGETSVLSGRWKEAGGDGYHRFK-EGGEGEVEWDRLLIQARP 753 + +KTL+GK + + +++++I +VK++IQD +G PD+QRL+FAGK LEDGRT DY I GS++ VLRLRG + FADVSD+S L E FS +AP WR GL +EGRC N C A GKM+I + F F+LM R ++ HCP C V P TCGF C W++ G ++ + +S WK+A G+ YHRF + G VEWD LLI +P Sbjct: 75 IYIKTLTGKTLKIHCTSTDSIDNVKQKIQDQDGTPPDQQRLIFAGKHLEDGRTLGDYGIFHGSSVCQVLRLRGGGGPL---TSMYFADVSDNSILREHTFSTNAPQWRSCGKGLNIEGRCENRGCPAFGKMIIYPNRFNPFNLM---RGDRAHCPMCGDDVKPLTCGFYDCVWKFDGIRSSDGFSISSPWKDASGEKYHRFDADEKHGSVEWDSLLIMVKP 289
BLAST of mRNA_L-elsbetiae_contig9191.18210.1 vs. uniprot
Match: A0A6A3IE52_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IE52_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.120e-51 Identity = 106/229 (46.29%), Postives = 133/229 (58.08%), Query Frame = 1 Query: 73 LGRKQLKVVVKTLSGKEIPLAISASETITDVKRQIQDLEGISPDEQRLVFAGKQLEDGRTPSDYKIQEGSTLHLVLRLRGXXXXXXXXVAGLFADVSDSSGLTERAFSDHAPSWRIARPGLCLEGRCTNELCVAHGKMVILNHDFRDFDLMLPGRDEKKHCPKCEKVVVPSTCGFTGCTWRYRGRKAGETSVLSGRWKEAGGDGYHRFK-EGGEGEVEWDRLLIQARPL 756 +G + +KTL+GK + A+ TI ++K IQ+ EGI PD+QR++FAGKQLEDGR SDY IQ GSTLHLVLRLRG FADVSD S E FS AP WRI R GL +EGRC N C+A+ ++VI F F+L +D CPKC V P TCGF C W++ G KA S W+ G+ Y RF + G +EW+ LLI +PL Sbjct: 97 VGSSSAMIYIKTLTGKTTHVNCHAANTIEEIKYDIQEQEGIPPDQQRIIFAGKQLEDGRKLSDYNIQYGSTLHLVLRLRGGYVEPRC-----FADVSDGSISVEHEFSRTAPEWRICRKGLNIEGRCMNRTCIAYHELVIHPAGFEMFNLR---KDGDVTCPKCRSKVKPVTCGFYDCAWKFEGVKARGGFFTSSPWQIVSGEKYQRFDADETSGSIEWESLLILVKPL 317
BLAST of mRNA_L-elsbetiae_contig9191.18210.1 vs. uniprot
Match: A0A815UV84_9BILA (Hypothetical protein n=6 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A815UV84_9BILA) HSP 1 Score: 189 bits (480), Expect = 1.250e-51 Identity = 99/224 (44.20%), Postives = 135/224 (60.27%), Query Frame = 1 Query: 88 LKVVVKTLSGKEIPLAISASETITDVKRQIQDLEGISPDEQRLVFAGKQLEDGRTPSDYKIQEGSTLHLVLRLRGXXXXXXXXVAGLFADVSDSSGLTERAFSDHAPSWRIARPGLCLEGRCTNELCVAHGKMVILNHDFRDFDLMLPGRDEKKHCPKCEKVVVPSTCGFTGCTWRYRGRKAGETS----VLSGRWKEAGGDGYHRFKEGGEGEVEWDRLLIQA 747 ++V +KT + K + + S+TI ++K +IQ EGI PD+QR++F GKQLEDGRT +DY IQ+ TLH+V+RLRG F D+S+ SGL +S AP WR A PGLCLEG+CTN C A+ + VI+N F+ FD++L CP C++ V P+TCGF C W ++G K G SG W EA + YH F E G V W +L+I+A Sbjct: 1 MQVFIKTHTCKTLTIECECSDTIENLKYKIQGKEGIPPDQQRIIFGGKQLEDGRTLADYNIQKEFTLHMVIRLRGGDMGVD------FVDLSNGSGLKRLNWSTSAPKWRKAGPGLCLEGQCTNRNCKAYSQAVIMNIRFKKFDMLLDVNQTTCQCPICKEYVKPNTCGFNRCWWCWKGIKEGGAGEPPKACSGNWTEAD-NAYHYFDEKISGSVTWRQLIIEA 217
BLAST of mRNA_L-elsbetiae_contig9191.18210.1 vs. uniprot
Match: S4W648_9VIRU (Ubiquitin n=1 Tax=Pandoravirus salinus TaxID=1349410 RepID=S4W648_9VIRU) HSP 1 Score: 196 bits (499), Expect = 4.140e-50 Identity = 97/225 (43.11%), Postives = 142/225 (63.11%), Query Frame = 1 Query: 82 KQLKVVVKTLSGKEIPLAISASETITDVKRQIQDLEGISPDEQRLVFAGKQLEDGRTPSDYKIQEGSTLHLVLRLRGXXXXXXXXVAGLFADVSDSSGLTERAFSDHAPSWRIARPGLCLEGRCTNELCVAHGKMVILNHDFRDFDLMLPGRDEKKHCPKCEKVVVPSTCGFTGCTWRYRGRKAGETSVLSGRWKEAGGDGYHRFKEGGEGEVEWDRLLIQARPL 756 + ++ V+TL+GK I + + + +I ++K I D EG+ PD+QRL++AG+Q+EDGR +DY I+ +++HLVLRLRG + F D+ ++ + R +S AP WRI +PGLC+EGRC N C A+G+MVI+N F FDL+L + CP+C+K V P TC F C W++ G K G++ +G+W A D YH F E G VEW RLLI+AR + Sbjct: 340 RSFQLFVQTLTGKVITIEAAPANSIEEIKCIIHDKEGLPPDQQRLLYAGQQMEDGRRLADYAIRAEASMHLVLRLRGGGGGPP--ASATFVDMENTGAMQCRQWSKSAPDWRIVKPGLCIEGRCKNVGCAAYGRMVIVNKGFDTFDLLLDA--DTCACPECDKHVKPKTCAFNNCWWKWNGIKEGDSRKYAGKWTLAD-DNYHCFAEDEAGSVEWTRLLIRARSI 559
BLAST of mRNA_L-elsbetiae_contig9191.18210.1 vs. uniprot
Match: A0A6A3GVD8_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GVD8_9STRA) HSP 1 Score: 182 bits (462), Expect = 6.960e-47 Identity = 97/222 (43.69%), Postives = 131/222 (59.01%), Query Frame = 1 Query: 88 LKVVVKTLSGKEIPLAISASETITDVKRQIQDLEGISPDEQRLVFAGKQLEDGRTPSDYKIQEGSTLHLVLRLRGXXXXXXXXVAGLFADVSDSSGLTERAFSDHAPSWRIARPGLCLEGRCTNELCVAHGKMVILNHDFRDFDLMLPGRDEKKHCPKCEKVVVPSTCGFTGCTWRYRGRKAGETSVLSGRWKEAGGDGYHRF-KEGGEGEVEWDRLLIQAR 750 L + +K+L+GK S++I +VK +IQD GI PD+QRL+ AG QL+DGR SDYKI+ GS L + LRLRG +F DVSD+S LTE++ S+ AP WR+ GL +EG C N C A G+MVI + F F+LM D CPKC + P TCGF C W++ G ++ + +S W+ AG YHRF + G VEW+ LLI + Sbjct: 118 LVLTIKSLTGKIAIFCAMPSDSIDNVKLRIQDKWGIPPDQQRLICAGVQLQDGRALSDYKIKTGSELLVFLRLRGGGGPRPPRK--VFVDVSDNSNLTEQSLSNEAPDWRVCDEGLNIEGECENRECEAFGQMVIYQYGFDSFNLM---GDRDVECPKCYETFTPITCGFYKCVWKFEGVRSSDGYFISSPWQNAGESKYHRFDSDENSGSVEWNSLLIVVK 334
BLAST of mRNA_L-elsbetiae_contig9191.18210.1 vs. uniprot
Match: A0A816Y3J2_9BILA (Hypothetical protein n=2 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816Y3J2_9BILA) HSP 1 Score: 187 bits (474), Expect = 2.410e-46 Identity = 103/230 (44.78%), Postives = 138/230 (60.00%), Query Frame = 1 Query: 70 RLGRKQLKVVVKTLSGKEIPLAISASETITDVKRQIQDLEGISPDEQRLVFAGKQLEDGRTPSDYKIQEGSTLHLVLRLRGXXXXXXXXVAGLFADVSDSSGLTERAFSDHAPSWRIARPGLCLEGRCTNELCVAHGKMVILNHDFRDFDLMLPGRDEKKHCPKCEKVVVPSTCGFTGCTWRYRGRKAGETS----VLSGRWKEAGGDGYHRFKEGGEGEVEWDRLLIQA 747 RL R + + V + K P A++A+ TI ++K +IQD EGI PD+QR++F GKQLEDGRT +DY IQ+ STLH+V+RLRG F D+S+ SGL +S AP W A PGLCLEG+CTN C A+ + VI+N F+ FD++L CP C++ V P+TCGF C W ++G K G SG W EA + YH F E G V W +L+I+A Sbjct: 471 RLFRDSVILYVPLDNSKLYPTALNAN-TIENLKYKIQDKEGIPPDQQRIIFGGKQLEDGRTLADYNIQKESTLHMVIRLRGGDMGVD------FVDLSNGSGLKRLNWSTSAPKWCKAGPGLCLEGQCTNRNCKAYSQAVIMNIRFKKFDMLLDVNQTTCQCPICKEYVKPNTCGFNRCWWCWKGIKEGGAGEPPKACSGNWTEAD-NAYHYFDEKISGSVTWRQLIIEA 692
BLAST of mRNA_L-elsbetiae_contig9191.18210.1 vs. uniprot
Match: A0A3M6V6M3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V6M3_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.080e-45 Identity = 99/223 (44.39%), Postives = 129/223 (57.85%), Query Frame = 1 Query: 88 LKVVVKTLSGKEIPLAISASETITDVKRQIQDLEGISPDEQRLVFAGKQLEDGRTPSDYKIQEGSTLHLVLRLRGXXXXXXXXVAGLFADVSDSSGLTERAFSDHAPSWRIARPGLCLEGRCTNELCVAHGKMVILNHDFRDFDLMLPGRDEKKHCPKCEKVVVPSTCGFTGCTWRYRGRKAGETSVLSGRWKEAGGDGYHRFK-EGGEGEVEWDRLLIQARP 753 + V V TLSGK I + +++T+ VK +I+D E I+P+ QRLV+AGK L D S Y I+ G+TLHL LR+RG V F DVS++S +T R FS AP WR+ GL +EGRC N C A+ M+I +F F+LM RD+ CP C V P TCGF GC WR+ G E + +W +A GD YHRF + G VEW LLI +P Sbjct: 76 MTVFVITLSGKTITINCLSTDTVNYVKMKIEDKESIAPEVQRLVYAGKLLNDQVMLSSYNIKGGNTLHLSLRIRGGSIGHSP-VFRTFVDVSNNSLITARKFSPDAPEWRLVSKGLNIEGRCRNRECRAYRSMIIDRKEFVPFNLM---RDDDIECPICHCEVRPITCGFYGCAWRFEGVTGSENLSICSQWNDASGDMYHRFDPDEVNGSVEWASLLILTKP 294
BLAST of mRNA_L-elsbetiae_contig9191.18210.1 vs. uniprot
Match: L8HGQ1_ACACA (Ubiquitin domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGQ1_ACACA) HSP 1 Score: 176 bits (445), Expect = 5.940e-43 Identity = 99/230 (43.04%), Postives = 128/230 (55.65%), Query Frame = 1 Query: 91 KVVVKTLSGKEIPLAISASETITDVKRQIQDLEGISPDEQRLVFAGKQLEDGRTPSDYKIQEGSTLHLVLRLRGXXXXXXXXVAGLFADVSDSSGLTERAFSDHAPSWRIARPGLCLEGRCTNELCVAHGKMVILNHDFRDFDLMLPGRDEKKHCPKCEKVVVPSTCGFTGCTWRY----RGRKAGETSV------LSGRWKEAGGDGYHRFKEGGEGEVEWDRLLIQAR 750 ++ KTL+GK I L + IT+VK ++ EGI D+QRL+FAGKQLEDG DY I STL LVLRLRG LF D+S+++ L R +S AP WR+A PGL +EG CTN C A + VI+N FDL+L HCP C V P+TC F C W++ +G +AG+ + LS +E + YHRF E G VEW RLLI + Sbjct: 331 QIFCKTLTGKTITLEAGPAHPITEVKVLVEAKEGIPADQQRLLFAGKQLEDGTCLGDYAIDRESTLQLVLRLRGGGLT----AGSLFVDMSNTNALERRQWSSKAPQWRVAMPGLSVEGVCTNRECEAFDRSVIINKHHGTFDLLLDAHT--CHCPSCGSYVEPATCAFNNCWWKWSGIKKGARAGQPPLHMVWLHLSTNNREQADNAYHRFSEDKAGTVEWLRLLIHTK 554 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9191.18210.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9191.18210.1 >prot_L-elsbetiae_contig9191.18210.1 ID=prot_L-elsbetiae_contig9191.18210.1|Name=mRNA_L-elsbetiae_contig9191.18210.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=263bp MVILNHDFRDFDLMLPGRDEKKHCPKCEKVVVPSTCGFTGCTWRYRGRKAback to top mRNA from alignment at L-elsbetiae_contig9191:769..3784+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9191.18210.1 ID=mRNA_L-elsbetiae_contig9191.18210.1|Name=mRNA_L-elsbetiae_contig9191.18210.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3016bp|location=Sequence derived from alignment at L-elsbetiae_contig9191:769..3784+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9191:769..3784+ >mRNA_L-elsbetiae_contig9191.18210.1 ID=mRNA_L-elsbetiae_contig9191.18210.1|Name=mRNA_L-elsbetiae_contig9191.18210.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1578bp|location=Sequence derived from alignment at L-elsbetiae_contig9191:769..3784+ (Laminarionema elsbetiae ELsaHSoW15)back to top |