|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1748 |
| Cds size | 1020 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816992.2300065-UTR-L-elsbetiae_contig9190:3686..3852 | 1622816992.2300065-UTR-L-elsbetiae_contig9190:3686..3852 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig9190 3687..3852 + |
| 1691683966.9881008-UTR-L-elsbetiae_contig9190:3686..3852 | 1691683966.9881008-UTR-L-elsbetiae_contig9190:3686..3852 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig9190 3687..3852 + |
| 1622816992.2682908-UTR-L-elsbetiae_contig9190:5869..6431 | 1622816992.2682908-UTR-L-elsbetiae_contig9190:5869..6431 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig9190 5870..6431 + |
| 1691683967.028983-UTR-L-elsbetiae_contig9190:5869..6431 | 1691683967.028983-UTR-L-elsbetiae_contig9190:5869..6431 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig9190 5870..6431 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816992.2432282-CDS-L-elsbetiae_contig9190:3852..4868 | 1622816992.2432282-CDS-L-elsbetiae_contig9190:3852..4868 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9190 3853..4868 + |
| 1691683966.999972-CDS-L-elsbetiae_contig9190:3852..4868 | 1691683966.999972-CDS-L-elsbetiae_contig9190:3852..4868 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9190 3853..4868 + |
| 1622816992.2548711-CDS-L-elsbetiae_contig9190:5865..5869 | 1622816992.2548711-CDS-L-elsbetiae_contig9190:5865..5869 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9190 5866..5869 + |
| 1691683967.0106773-CDS-L-elsbetiae_contig9190:5865..5869 | 1691683967.0106773-CDS-L-elsbetiae_contig9190:5865..5869 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9190 5866..5869 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9190.18209.1 >prot_L-elsbetiae_contig9190.18209.1 ID=prot_L-elsbetiae_contig9190.18209.1|Name=mRNA_L-elsbetiae_contig9190.18209.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=340bp
MPTLCTQAGCTKQPSYGEVGSGKPEFCFAHKKNGMMDLNSKRCGQQGCIK
RPSYGVGGSGKPEFCFAHKKDGMVNVVNKRCGQQGCTKQPSYGVVGSGKR
EFCFAHKKNGMMDLNSKRCGQQGCIKRPSYGVGGSGKPEFCFAHKKNGMM
DVKTKKCGQQGCTTLPVYGVAGSSKREFCSEHKKDEMVDLNSKRCGQQGC
IKQPSYGVGGSGKREFCSAHKKDRMVDLKNKRCGHQGCIKQPSYGVGGSG
KPEFCSEHKKDGMMDLKNKRCGQSVPPRVTGGNKKARWAPTDLAMALTSV
EAPRNGRATPSEHDQRLSEPDGVKTEPAEFRIGRRGSWR* back to topmRNA from alignment at L-elsbetiae_contig9190:3687..6431+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig9190.18209.1 ID=mRNA_L-elsbetiae_contig9190.18209.1|Name=mRNA_L-elsbetiae_contig9190.18209.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2745bp|location=Sequence derived from alignment at L-elsbetiae_contig9190:3687..6431+ (Laminarionema elsbetiae ELsaHSoW15)
CCTGCAGGCTGCCGTGCAGAGAGGGTCATCTCCCGTTGGTTGTTTTTTTT
ACCAGAGGGGGCACGAGGCGGGCTCTCCATCTTGCACGTGCGTGACGAAA
TCTTCGGCATCGCCGCTGTTTTACGGCCAGCAGAGCGGCCGAGAAAGCCA
GGAAGCCACAGGAAGGATGCCGACATTGTGTACCCAAGCAGGTTGCACAA
AGCAGCCATCATATGGCGAGGTCGGTAGCGGCAAGCCGGAATTCTGCTTT
GCGCACAAGAAGAACGGGATGATGGACTTGAACAGCAAGAGGTGCGGCCA
ACAAGGTTGCATAAAGCGCCCGTCCTATGGCGTGGGCGGGAGCGGCAAGC
CGGAGTTCTGCTTTGCACACAAGAAGGATGGGATGGTGAACGTCGTCAAT
AAGAGGTGCGGCCAACAAGGTTGCACCAAGCAGCCATCATATGGCGTGGT
CGGTAGCGGCAAGCGGGAGTTCTGCTTTGCGCACAAGAAGAACGGGATGA
TGGACTTGAACAGCAAGAGGTGCGGCCAACAAGGTTGCATAAAGCGCCCG
TCCTATGGCGTGGGCGGGAGCGGCAAGCCGGAGTTCTGCTTTGCGCACAA
GAAGAACGGGATGATGGACGTGAAGACCAAGAAGTGCGGCCAACAAGGTT
GCACCACGCTGCCGGTATATGGCGTGGCCGGGAGCAGCAAGCGGGAGTTC
TGCTCTGAGCACAAGAAGGACGAGATGGTGGACTTGAACAGCAAGAGGTG
CGGCCAACAAGGTTGCATCAAGCAGCCGTCATATGGCGTGGGCGGTAGCG
GCAAGCGGGAGTTCTGCTCTGCACACAAGAAGGACAGGATGGTGGACTTG
AAGAACAAGAGGTGCGGCCATCAGGGTTGCATCAAGCAGCCGTCGTATGG
CGTAGGCGGAAGCGGCAAGCCGGAATTTTGCTCTGAACACAAGAAGGACG
GGATGATGGACTTGAAGAACAAGAGGTGCGGCCAATCCGTTCCTCCAAGG
GTTACGGGGGGCAACAAGAAGGCCCGCTGGGCTCCCACCGACTTGGCTAT
GGCTTTAACTTCAGTAGAAGCACCGCGAAATGGGAGAGCAACCCCATCAG
AGCACGACCAACGACTTTCGGAGCCAGACGGCGTGAAGACGGAACCGGCG
GAATTTCGCATCGGAAGGCGAGGAAGCTGGAGGTGAGTTGAAAGTAGTGC
CACCGCACCGCCTCTGTTGTTGTTGTTGTTGTGGTCTTCTACCGTAGTAT
CCTCCGTGACCGCCCCAGGGGGCGATCATAGTGTTTAAGATTGAAATATT
GCCCCATGGAAATAAAACCCCCTGGGGCGAACAGTCCCCCCGGGGCGTGT
GGTCTACTTTTAGTCCCGCATCCACAACACACACGGTATCACGGTATAGC
AGACCTTCACGCGAGCCCAGCATGTCGGATACTCCTAGTGAGAAGACGCA
GAGGACAGACGATTGGGGAAGCTTGTTGCGTGCACGGACAGCGCCCCCTC
TATCGGTGGCAATGACCGAATAAAGCCTTGGATGCGCGTGAAAACAACCC
GGGGAGCCCCAACCCGAAAAATAGCAGGCGTTCTCGGAGGTAAAGGCGCG
AACATAAATTCATGGAAGAAACAAGTTCACCCGTTCTCAAGGTTTTTGTG
GTTCAAACCGGATTTGTTGTTATGGGGGGAGCGTGCGCTGTGAAGAGGGC
GTTCACGGAGGATATTACGGCATATACGACCATCCATACTGCAATCGCGA
GGTACTTTTCATCCACCCGTTGCCCCTATTTAATGTTGAATGAACTTCAA
GGGAAATGTTTGCATTCTTTAGTATTCAGATGTTTTCTTGGCGTGAGCAT
TGCTATTGGAATTTCGGTGTCAAATCGTGCGGGTATGTTGGAGAGCTTCG
ATACGAAGGCCCTGCGATCCATAATATGCCTAGTGGGGAACTGCCGCCCG
CGCCGAGTTGCGTCCATTCTCCCCACGATCGAAGCTTGTTTTCTGGGCAT
GCTATGTACAAGCAGCAGAAGATTTGGTACCGTCTCATGTTCACAGCCTA
CTGAGTGCAGTTAACGCATATACCCGCCCCCCCGATGCTGCTCCTTCTCT
CAGCACTCCGATAGCCACCGTCCTCATTTCGGACTTTTGCAGATCTCTCA
CGTTTATGCGATACGTTCCTTTCCACCAGGTAAGGTGCGTCGCGAAGAAC
CGGGAGAGCTACAGCGGAGGAACGGGAGTGCAAGTTTGACTTATTTGTGC
TTGCAGGTTGACGGCAGCAGGTGTCTACAACAGCAGTAGACGGGATATCA
ACGGCATGAGTACCGCGCATAACCACGTACTGCGAAAGCCCTATGTACAT
AGCTGTTGTACACAGTAGCATCGTCTTAGGTAGGAAGGATGTGGTCGGTG
ACAACGTGGACAACCAAATGCTCCATTTTCGGGTTCCAAACAAACTGCCT
AGTTGTGCAGTTGTTGTTTAGTTGCCGTTGATTAGGGCATCACTTTGGGT
TGTATTCGGCGGTTGCAATGGGGCGAGCGCGATGTGCCGTCGTACCTAGT
ATCCAGCAAGTTTAGCAATCGGTATTTCGTTCGCGGCAATGTAGCCTTCA
TTCGGTTTCTCGTGCCATCAGGCAAGACACCAGTACAGCAGTGAAGGGTA
AACCCACAACGTGAATATGAACGCACTCTGGAGAATTCAGCTTCTGCTTA
TACGAGTAAACGTTTATCTCCTTGTTGTTGCGGATATTGAGCACA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig9190:3687..6431+ >mRNA_L-elsbetiae_contig9190.18209.1 ID=mRNA_L-elsbetiae_contig9190.18209.1|Name=mRNA_L-elsbetiae_contig9190.18209.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2040bp|location=Sequence derived from alignment at L-elsbetiae_contig9190:3687..6431+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGACATTGTGTACCCAAGCAGGTTGCACAAAGCAGCCATCATATGG
CGAGGTCGGTAGCGGCAAGCCGGAATTCTGCTTTGCGCACAAGAAGAACG
GGATGATGGACTTGAACAGCAAGAGGTGCGGCCAACAAGGTTGCATAAAG
CGCCCGTCCTATGGCGTGGGCGGGAGCGGCAAGCCGGAGTTCTGCTTTGC
ACACAAGAAGGATGGGATGGTGAACGTCGTCAATAAGAGGTGCGGCCAAC
AAGGTTGCACCAAGCAGCCATCATATGGCGTGGTCGGTAGCGGCAAGCGG
GAGTTCTGCTTTGCGCACAAGAAGAACGGGATGATGGACTTGAACAGCAA
GAGGTGCGGCCAACAAGGTTGCATAAAGCGCCCGTCCTATGGCGTGGGCG
GGAGCGGCAAGCCGGAGTTCTGCTTTGCGCACAAGAAGAACGGGATGATG
GACGTGAAGACCAAGAAGTGCGGCCAACAAGGTTGCACCACGCTGCCGGT
ATATGGCGTGGCCGGGAGCAGCAAGCGGGAGTTCTGCTCTGAGCACAAGA
AGGACGAGATGGTGGACTTGAACAGCAAGAGGTGCGGCCAACAAGGTTGC
ATCAAGCAGCCGTCATATGGCGTGGGCGGTAGCGGCAAGCGGGAGTTCTG
CTCTGCACACAAGAAGGACAGGATGGTGGACTTGAAGAACAAGAGGTGCG
GCCATCAGGGTTGCATCAAGCAGCCGTCGTATGGCGTAGGCGGAAGCGGC
AAGCCGGAATTTTGCTCTGAACACAAGAAGGACGGGATGATGGACTTGAA
GAACAAGAGGTGCGGCCAATCCGTTCCTCCAAGGGTTACGGGGGGCAACA
AGAAGGCCCGCTGGGCTCCCACCGACTTGGCTATGGCTTTAACTTCAGTA
GAAGCACCGCGAAATGGGAGAGCAACCCCATCAGAGCACGACCAACGACT
TTCGGAGCCAGACGGCGTGAAGACGGAACCGGCGGAATTTCGCATCGGAA
GGCGAGGAAGCTGGAGATGCCGACATTGTGTACCCAAGCAGGTTGCACAA
AGCAGCCATCATATGGCGAGGTCGGTAGCGGCAAGCCGGAATTCTGCTTT
GCGCACAAGAAGAACGGGATGATGGACTTGAACAGCAAGAGGTGCGGCCA
ACAAGGTTGCATAAAGCGCCCGTCCTATGGCGTGGGCGGGAGCGGCAAGC
CGGAGTTCTGCTTTGCACACAAGAAGGATGGGATGGTGAACGTCGTCAAT
AAGAGGTGCGGCCAACAAGGTTGCACCAAGCAGCCATCATATGGCGTGGT
CGGTAGCGGCAAGCGGGAGTTCTGCTTTGCGCACAAGAAGAACGGGATGA
TGGACTTGAACAGCAAGAGGTGCGGCCAACAAGGTTGCATAAAGCGCCCG
TCCTATGGCGTGGGCGGGAGCGGCAAGCCGGAGTTCTGCTTTGCGCACAA
GAAGAACGGGATGATGGACGTGAAGACCAAGAAGTGCGGCCAACAAGGTT
GCACCACGCTGCCGGTATATGGCGTGGCCGGGAGCAGCAAGCGGGAGTTC
TGCTCTGAGCACAAGAAGGACGAGATGGTGGACTTGAACAGCAAGAGGTG
CGGCCAACAAGGTTGCATCAAGCAGCCGTCATATGGCGTGGGCGGTAGCG
GCAAGCGGGAGTTCTGCTCTGCACACAAGAAGGACAGGATGGTGGACTTG
AAGAACAAGAGGTGCGGCCATCAGGGTTGCATCAAGCAGCCGTCGTATGG
CGTAGGCGGAAGCGGCAAGCCGGAATTTTGCTCTGAACACAAGAAGGACG
GGATGATGGACTTGAAGAACAAGAGGTGCGGCCAATCCGTTCCTCCAAGG
GTTACGGGGGGCAACAAGAAGGCCCGCTGGGCTCCCACCGACTTGGCTAT
GGCTTTAACTTCAGTAGAAGCACCGCGAAATGGGAGAGCAACCCCATCAG
AGCACGACCAACGACTTTCGGAGCCAGACGGCGTGAAGACGGAACCGGCG
GAATTTCGCATCGGAAGGCGAGGAAGCTGGAGGTAAGTAA back to top
|