mRNA_L-elsbetiae_contig9177.18199.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9177.18199.1 vs. uniprot
Match: A0A6H5KIX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIX3_9PHAE) HSP 1 Score: 199 bits (507), Expect = 9.440e-60 Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 1 Query: 73 ATSESPSSRSPVATPVAAMRNLYTAAFSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLRCTLLTSLSLQVICLAALTQTEPVLGDLEEATSGSTRYIEATIY 456 AT+ PS+ + A VA MRNLYTAA SYNGYT+TDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLR TLLTSL LQ++CL+ALTQTEPVLGDL+EAT G+TRY+EATIY Sbjct: 52 ATAPEPSAAA--AKQVAPMRNLYTAAMSYNGYTVTDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLRFTLLTSLVLQIVCLSALTQTEPVLGDLKEATPGNTRYLEATIY 177
BLAST of mRNA_L-elsbetiae_contig9177.18199.1 vs. uniprot
Match: D7FPK8_ECTSI (Putative membrane transporter (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK8_ECTSI) HSP 1 Score: 199 bits (505), Expect = 3.690e-59 Identity = 111/145 (76.55%), Postives = 120/145 (82.76%), Query Frame = 1 Query: 31 GAAGG---GGAEISGAAATSESPSSRSPVATPVAAMRNLYTAAFSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLRCTLLTSLSLQVICLAALTQTEPVLGDLEEATSGSTRYIEATIY 456 GA GG G A+ S A E ++ + + VA MRNLYTAA SYNGYT+TDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLR TLLTSL LQ+ICL+ALTQTEPVLGDL EAT GS RY+EATIY Sbjct: 36 GARGGEEEGKADESSMATAPEPSAAAAGASKQVAPMRNLYTAALSYNGYTVTDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLRFTLLTSLVLQIICLSALTQTEPVLGDLREATPGSRRYLEATIY 180
BLAST of mRNA_L-elsbetiae_contig9177.18199.1 vs. uniprot
Match: A0A836CH56_9STRA (Putative membrane transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH56_9STRA) HSP 1 Score: 141 bits (356), Expect = 7.220e-37 Identity = 70/112 (62.50%), Postives = 90/112 (80.36%), Query Frame = 1 Query: 121 AAMRNLYTAAFSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLRCTLLTSLSLQVICLAALTQTEPVLGDLEEATSGSTRYIEATIY 456 A +RNLY A SYN +T TDGALRL+VLLHA +LGF+AI+IA MFS YEVAGVFTNLFGGVAGSK+GL CTL+TS+ LQ++CL AL + GDLE++++ + ++AT+Y Sbjct: 34 APIRNLYITAMSYNAFTFTDGALRLVVLLHADELGFDAIQIAIMFSLYEVAGVFTNLFGGVAGSKFGLFCTLMTSIFLQIVCLGALMGVGSIFGDLEDSSNDAR--VQATVY 143
BLAST of mRNA_L-elsbetiae_contig9177.18199.1 vs. uniprot
Match: A0A836CEU1_9STRA (Putative membrane transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEU1_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.540e-29 Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = 1 Query: 121 AAMRNLYTAAFSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLRCTLLTSLSLQVICLAAL 378 A +RNLY + SY G+T+TDGALRL+VLL+A LGF+AI+IA MFS YE AGV TNLFGGVAGSKYGL CTLL+SL LQ++CLA + Sbjct: 39 APVRNLYVTSTSYVGFTLTDGALRLVVLLYADSLGFDAIQIAIMFSLYEAAGVVTNLFGGVAGSKYGLFCTLLSSLLLQMLCLATI 124
BLAST of mRNA_L-elsbetiae_contig9177.18199.1 vs. uniprot
Match: A0A2R5GYA8_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GYA8_9STRA) HSP 1 Score: 115 bits (289), Expect = 2.850e-27 Identity = 60/117 (51.28%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 64 GAAATSESPSSRSPVATPVAAMRNLYTAAFSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLRCTLLTSLSLQVICLAALTQTEPVLGDLEE 414 GA +++ PS R+P A ++RNLY +S+N +TITDGA+RL+VLLHAA LGF+ I+IA MF+ YE+AGVFTNLFGG+ G++YGL+ +L SL QV+ L L T + ++E+ Sbjct: 79 GAIGSTDEPS-RAPAANEPRSIRNLYVTVYSFNLFTITDGAIRLVVLLHAAALGFSPIQIAIMFTLYELAGVFTNLFGGIIGTRYGLKVSLFISLGTQVVGLVMLLLTTIIFPEVED 194
BLAST of mRNA_L-elsbetiae_contig9177.18199.1 vs. uniprot
Match: A0A7S2WN85_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WN85_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.600e-25 Identity = 52/92 (56.52%), Postives = 68/92 (73.91%), Query Frame = 1 Query: 127 MRNLYTAAFSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLRCTLLTSLSLQVICLAALTQTEPVLG 402 MRN Y +S+N +T+TDGA+R+IVLLHA L F I IA MF+ YE+ GVFTNLFGG+AG+++GL+CTL TSL LQ++ L L P+ G Sbjct: 76 MRNFYATVYSFNMFTVTDGAIRVIVLLHANALNFTPIAIALMFTLYELMGVFTNLFGGIAGTRWGLKCTLFTSLFLQLVGLGLLMAVGPLFG 167
BLAST of mRNA_L-elsbetiae_contig9177.18199.1 vs. uniprot
Match: A0A7S1X7D5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X7D5_9CHLO) HSP 1 Score: 93.6 bits (231), Expect = 9.620e-21 Identity = 48/85 (56.47%), Postives = 62/85 (72.94%), Query Frame = 1 Query: 124 AMRNLYTAAFSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLRCTLLTSLSLQVICLAAL 378 A++ + SY +TITDGALR+IVLLHA LGF+A E A +F+ YEVAGV TNL GV G+K+G+R TLLT LSLQ++ + L Sbjct: 115 ALKPFVIISSSYLLFTITDGALRMIVLLHAYGLGFSAFETAILFTLYEVAGVVTNLLAGVMGAKWGIRATLLTGLSLQILGIGML 199
BLAST of mRNA_L-elsbetiae_contig9177.18199.1 vs. uniprot
Match: A0A7S0Q0W5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q0W5_9EUKA) HSP 1 Score: 93.2 bits (230), Expect = 1.410e-20 Identity = 43/71 (60.56%), Postives = 57/71 (80.28%), Query Frame = 1 Query: 166 YTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLRCTLLTSLSLQVICLAAL 378 +T+TDGA+R+IVLLHA GF A+E+A MF+ YE+AGV TNL GVAGSK+G++CTL+T LSLQ++ L Sbjct: 7 FTVTDGAIRMIVLLHAYQKGFTALEVALMFTLYELAGVVTNLGAGVAGSKWGIKCTLVTGLSLQLLAFGLL 77
BLAST of mRNA_L-elsbetiae_contig9177.18199.1 vs. uniprot
Match: A0A3B0S4X5_9ZZZZ (MFS-type efflux pump ArsJ specific for 1-arseno-3-phosphoglycerate n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0S4X5_9ZZZZ) HSP 1 Score: 93.2 bits (230), Expect = 1.980e-19 Identity = 45/84 (53.57%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 127 MRNLYTAAFSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLRCTLLTSLSLQVICLAAL 378 +RN SY G+T+TDGALR++VLLH LG+ +++AF+F YE GV TNLFGG G++YGLR TL T L LQV+ L L Sbjct: 4 IRNYAAVTASYWGFTLTDGALRMLVLLHFHALGYRPLDLAFLFLLYEAMGVLTNLFGGWIGARYGLRLTLFTGLGLQVVALVLL 87
BLAST of mRNA_L-elsbetiae_contig9177.18199.1 vs. uniprot
Match: A0A6U2C943_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2C943_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.540e-19 Identity = 42/79 (53.16%), Postives = 63/79 (79.75%), Query Frame = 1 Query: 124 AMRNLYTAAFSYNGYTITDGALRLIVLLHAADLGFNAIEIAFMFSAYEVAGVFTNLFGGVAGSKYGLRCTLLTSLSLQV 360 A+R + SY +T+TDGA+R+IVLLHA + F+A+E+A MF+ YE+AGVFTNL G+AG+++G+RCTL++ L+LQ+ Sbjct: 31 ALRPFVIISTSYLLFTVTDGAIRMIVLLHAYNKSFSALEVAVMFTLYELAGVFTNLLAGLAGARWGIRCTLISGLTLQL 109 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9177.18199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9177.18199.1 >prot_L-elsbetiae_contig9177.18199.1 ID=prot_L-elsbetiae_contig9177.18199.1|Name=mRNA_L-elsbetiae_contig9177.18199.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp MAEEVKCRVDGAAGGGGAEISGAAATSESPSSRSPVATPVAAMRNLYTAAback to top mRNA from alignment at L-elsbetiae_contig9177:3189..6098+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9177.18199.1 ID=mRNA_L-elsbetiae_contig9177.18199.1|Name=mRNA_L-elsbetiae_contig9177.18199.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2910bp|location=Sequence derived from alignment at L-elsbetiae_contig9177:3189..6098+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9177:3189..6098+ >mRNA_L-elsbetiae_contig9177.18199.1 ID=mRNA_L-elsbetiae_contig9177.18199.1|Name=mRNA_L-elsbetiae_contig9177.18199.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=912bp|location=Sequence derived from alignment at L-elsbetiae_contig9177:3189..6098+ (Laminarionema elsbetiae ELsaHSoW15)back to top |