mRNA_L-elsbetiae_contig9174.18194.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9174.18194.1 vs. uniprot
Match: A0A6H5K9F0_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9F0_9PHAE) HSP 1 Score: 285 bits (728), Expect = 9.160e-89 Identity = 151/197 (76.65%), Postives = 169/197 (85.79%), Query Frame = 1 Query: 277 SADQAREDVLTSMLSKMDAYRPVQLMH--MEDLEFLDMRGAVVNWFAKVSVSYNFANETVVAALSHFDRYVSLTETPVNDHMLLQLAAYVALLIASKMGEISPLRMKSLAHLTGRMFTPLQVKRLEMDMISKLNFRLAPPSADEALHCLSTLLHNSSDRRASSPAVSGGALHAGTLSAAAYYLKKARARTCWFRHSP 861 SADQA E+ LTS+L+K +AYRP++ MED EFLDMRGAVVNWFAKVSVSY+FANETVVAALSHFDRYVSLT TPVNDHMLLQLAAYVALLIASKMGE PLRM+SLA+LTGRMFTPLQVK+LEMDMISKLNFRLAPPS DEALHCLS+LL SS + G LH+ LSA+++YLK+ARARTCWFRH+P Sbjct: 56 SADQAHEEFLTSLLAKTNAYRPLETSWQVMEDAEFLDMRGAVVNWFAKVSVSYDFANETVVAALSHFDRYVSLTVTPVNDHMLLQLAAYVALLIASKMGETCPLRMRSLANLTGRMFTPLQVKQLEMDMISKLNFRLAPPSPDEALHCLSSLLLRSSSSSDNKSGRGGVPLHSDVLSASSHYLKRARARTCWFRHAP 252
BLAST of mRNA_L-elsbetiae_contig9174.18194.1 vs. uniprot
Match: A0A812S730_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812S730_9DINO) HSP 1 Score: 69.7 bits (169), Expect = 6.840e-10 Identity = 45/149 (30.20%), Postives = 73/149 (48.99%), Query Frame = 1 Query: 253 VKRELTTSSADQAREDVLTSMLSKMDAYRPVQLMHMEDLEF-LDMRGAVVNWFAKVSVSYNFANETVVAALSHFDRYVSLTETPVNDHMLLQLAAYVALLIASKMGEISPLRMKSLAHLTGRMFTPLQVKRLEMDMISKLNFRLAPPSA 696 ++ E + +D+ M S +++P E E MR +V+W +V + Y ET+ A++ DRY+S+ + LQL ALLIASK EI P +K ++T +T + R+E+ ++S LNF L P+A Sbjct: 102 MEEEEDPQQVSEYSKDIFERMFSMERSFQPRCHFLAEQREINTKMRAILVDWLVEVHMKYRLKPETLFMAVNVIDRYLSMRQVA---RKKLQLCGVTALLIASKFEEIYPPEVKDFVYITDNAYTKDDILRMEVSILSTLNFELCGPTA 247
BLAST of mRNA_L-elsbetiae_contig9174.18194.1 vs. uniprot
Match: A0A7L0U951_CHOAC (CCNB1 protein (Fragment) n=2 Tax=Chordeilinae TaxID=48287 RepID=A0A7L0U951_CHOAC) HSP 1 Score: 66.6 bits (161), Expect = 5.550e-9 Identity = 39/126 (30.95%), Postives = 71/126 (56.35%), Query Frame = 1 Query: 316 LSKMDAYRPVQLMHMEDLEF-LDMRGAVVNWFAKVSVSYNFANETVVAALSHFDRYVSLTETPVNDHMLLQLAAYVALLIASKMGEISPLRMKSLAHLTGRMFTPLQVKRLEMDMISKLNFRLAPP 690 L ++ +P++ ++ E +MR +++W +V V + ET+ A++ DRY L + V+ ML QL A+ IA+K EI P + A++T +T LQ++++EM+++ L+FRL P Sbjct: 56 LRDLEEKQPIRPKYLAGQEINANMRAILIDWLVQVQVKFRLHQETLYMAVAIIDRY--LQDNTVSKRML-QLVGVTAMFIATKYEEIFPPHIGDFAYVTDHTYTNLQIRKMEMNILQALDFRLGRP 178
BLAST of mRNA_L-elsbetiae_contig9174.18194.1 vs. uniprot
Match: A0A094NIB7_ANTCR (G2/mitotic-specific cyclin-B1 (Fragment) n=2 Tax=Antrostomus carolinensis TaxID=279965 RepID=A0A094NIB7_ANTCR) HSP 1 Score: 63.2 bits (152), Expect = 8.420e-8 Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 379 DMRGAVVNWFAKVSVSYNFANETVVAALSHFDRYVSLTETPVNDHMLLQLAAYVALLIASKMGEISPLRMKSLAHLTGRMFTPLQVKRLEMDMISKLNFRLAPP 690 +MR +++W +V + + ET+ A++ DRY L V+ ML QL A+ IA+K E+ P + A++T +T LQ++++EM+++ L+FR+ P Sbjct: 78 NMRAILIDWLVQVQIKFRLHQETLYMAVAIIDRY--LQNNAVSKRML-QLVGVTAMFIATKYEEVFPPNIGDFAYVTDHTYTNLQIRKMEMNILQALDFRVGHP 178
BLAST of mRNA_L-elsbetiae_contig9174.18194.1 vs. uniprot
Match: A0A7S1EYX9_NOCSC (G2/mitotic-specific cyclin-B3 n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1EYX9_NOCSC) HSP 1 Score: 62.4 bits (150), Expect = 2.100e-7 Identity = 34/104 (32.69%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 385 RGAVVNWFAKVSVSYNFANETVVAALSHFDRYVSLTETPVNDHMLLQLAAYVALLIASKMGEISPLRMKSLAHLTGRMFTPLQVKRLEMDMISKLNFRLAPPSA 696 R +V+W VSV++N T+ ++ D Y+SL V LLQL A++IASK E++P ++ ++ ++ Q+ R+E+ M++ L+FR+A P+A Sbjct: 175 RAVLVDWLVDVSVTFNLRMSTLFLSIRLLDSYMSLVTGSVPKR-LLQLVGATAMMIASKFEEVTPPDLQDFIYVAADAYSKDQILRMEVQMLTVLDFRIATPTA 277
BLAST of mRNA_L-elsbetiae_contig9174.18194.1 vs. uniprot
Match: A0A6J1JBE4_CUCMA (B-like cyclin n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JBE4_CUCMA) HSP 1 Score: 60.1 bits (144), Expect = 1.030e-6 Identity = 44/146 (30.14%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 277 SADQAREDVLTSMLSKMDAYRPVQLMHMEDLEFLDMRGAVVNWFAKVSVSYNFANETVVAALSHFDRYVSLTETPVNDHMLLQLAAYVALLIASKMGE-ISPLRMKSLAHLTGRMFTPLQVKRLEMDMISKLNFRLAPPSADEALH 711 S D A +L S L M V+ ++ + + ++ NW KV YNF T + ++++FDR++S P + L QL A L +A+KM E + PL + +F P V+R+E+ ++S LN+RL + + LH Sbjct: 36 SDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSI-NWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWLFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLH 180
BLAST of mRNA_L-elsbetiae_contig9174.18194.1 vs. uniprot
Match: A0A085MAF5_9BILA (Uncharacterized protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085MAF5_9BILA) HSP 1 Score: 60.5 bits (145), Expect = 1.050e-6 Identity = 35/118 (29.66%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 355 HMEDLEFLD--MRGAVVNWFAKVSVSYNFANETVVAALSHFDRYVSLTETPVNDHMLLQLAAYVALLIASKMGEISPLRMKSLAHLTGRMFTPLQVKRLEMDMISKLNFRLAPPSADE 702 +M + + LD MR +V+W V + +NF ET+ ++ DR+++ + LQL V +++ASK+ EI P ++K A +T +T +V ++E M+ +F++ PP+ +E Sbjct: 243 YMSEQDELDARMRSILVDWLVDVCLEFNFCQETLHVGVTLTDRFLAGMNVSKDK---LQLVGVVGVMVASKLEEIYPPKVKDFAAITDETYTVSEVLKMERIMLDFFHFKVHPPTVNE 357
BLAST of mRNA_L-elsbetiae_contig9174.18194.1 vs. uniprot
Match: UPI001E1CE851 (G2/mitotic-specific cyclin S13-7-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CE851) HSP 1 Score: 58.9 bits (141), Expect = 2.590e-6 Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 1 Query: 265 LTTSSADQAREDVLTSMLSKMDAYRPVQLMHMEDLEFLDMRGAVVNWFAKVSVSYNFANETVVAALSHFDRYVSLTETPVNDHMLLQLAAYVALLIASKMGEISPLRMKSLAHLTGRMFTPLQVKRLEMDMISKLNFRLAPPSADEALH--CLSTLLHNSSDRR 750 L T Q +D+ T+ + Y M + MR +++W KV+ +F +ET+ A+S DR+++ T + LQL +LL+A+KM E R+ LA + G + R+E+ ++SKL F L P++ L+ L H + DRR Sbjct: 60 LETVLGAQYADDIFTNRKAAETHYHVENCMANQPQVTQHMRCTLIHWLQKVNQQLHFGSETLFVAVSLCDRFLATTSLAQD---CLQLLGLCSLLVAAKMEENVLPRVSELARICGASYKHHHFTRMEVLLLSKLEFALYCPTSWYFLNHLALKATQHGTMDRR 220
BLAST of mRNA_L-elsbetiae_contig9174.18194.1 vs. uniprot
Match: A0A4P1RKJ8_LUPAN (B-like cyclin n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A4P1RKJ8_LUPAN) HSP 1 Score: 58.2 bits (139), Expect = 4.430e-6 Identity = 38/116 (32.76%), Postives = 60/116 (51.72%), Query Frame = 1 Query: 397 VNWFAKVSVSYNFANETVVAALSHFDRYVSLTETPVNDHMLLQLAAYVALLIASKMGEIS-PLRMKSLAHLTGRMFTPLQVKRLEMDMISKLNFRLAPPSADEALHCLSTLLHNSS 741 VNW KV Y F T +++ DR++S T P + + QL + L +A+KM E+ PL M +F P ++R+E+ ++S LN+RL + + LH T L +SS Sbjct: 70 VNWILKVHAYYQFRPVTAFLCINYLDRFLSRTSLPRENGWVFQLVSVACLSVAAKMEELEVPLLMDLQLFEPRFIFQPKTIQRMELWVMSNLNWRLHSVTPFDYLHYFITNLPSSS 185
BLAST of mRNA_L-elsbetiae_contig9174.18194.1 vs. uniprot
Match: A0A813GAS6_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GAS6_POLGL) HSP 1 Score: 58.2 bits (139), Expect = 6.410e-6 Identity = 35/109 (32.11%), Postives = 60/109 (55.05%), Query Frame = 1 Query: 382 MRGAVVNWFAKVSVSYNFANETVVAALSHFDRYVSLTETPVNDHMLLQLAAYVALLIASKMGEISPLRMKSLAHLTGRMFTPLQVKRLEMDMISKLNFRLAPPSADEAL 708 MR +++W V Y ET+ A+S DR++ E V LQL ALLIA+K E+ P ++ ++T + +T +V R+E+ M++ L+F++ P+A + L Sbjct: 238 MRAILIDWLVDVHKRYKLKAETLFLAISLVDRFL---ERRVTARRHLQLVGVTALLIAAKFEELYPPQIHEFVYVTDKTYTKEEVIRMEVLMLTVLDFKICRPTAVQFL 343 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9174.18194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9174.18194.1 >prot_L-elsbetiae_contig9174.18194.1 ID=prot_L-elsbetiae_contig9174.18194.1|Name=mRNA_L-elsbetiae_contig9174.18194.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp MTEDLLCGEEVCALVHAGQAQQQQQQQQQMQHEEEEAEEAVKRELTTSSAback to top mRNA from alignment at L-elsbetiae_contig9174:1362..3750+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9174.18194.1 ID=mRNA_L-elsbetiae_contig9174.18194.1|Name=mRNA_L-elsbetiae_contig9174.18194.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2389bp|location=Sequence derived from alignment at L-elsbetiae_contig9174:1362..3750+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9174:1362..3750+ >mRNA_L-elsbetiae_contig9174.18194.1 ID=mRNA_L-elsbetiae_contig9174.18194.1|Name=mRNA_L-elsbetiae_contig9174.18194.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1458bp|location=Sequence derived from alignment at L-elsbetiae_contig9174:1362..3750+ (Laminarionema elsbetiae ELsaHSoW15)back to top |