mRNA_L-elsbetiae_contig9162.18187.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9162.18187.1
Unique NamemRNA_L-elsbetiae_contig9162.18187.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig9162.18187.1 vs. uniprot
Match: D8LLB0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLB0_ECTSI)

HSP 1 Score: 502 bits (1293), Expect = 5.910e-172
Identity = 339/456 (74.34%), Postives = 362/456 (79.39%), Query Frame = 2 
Query:   20 GAFGETE-RGXXXXXXXXXPLRKRDIPTPIIATVPGYEAEQSGDFRVPDGYIRYPRRTAGEDDVATCDYCLEMEDEEWLEKHPRYGLAAXXXXXXXXXXXXXXXXDDDKLELMLGILEMATGQADPIPLPQAETLFVSKLGMSKAVHHDAWTEVYRFWKDKRSRIGKPLLRKFWPVTPSNDTDPHKVFRPREKERYKLRKHRKNDLDSFRKLQQVKKDFEKVSMYPHTRARDRSSSRKTKXXXXXXXASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEDGLAPSFGVIPGSHVSVLPSFMDDLKTRANMPVRTVVEPALAVYTALGGK-GKGKSGVSXXXXXXXXXXXXXXXXGARGKAVRVGVEPVYKFRLRGRIGRGGRVMWDRVPIKGAPPARDDGLADPEEAPLVVHSSYVQFPFKPPSAHVLHPPMVNLN 1381
            G  GE+E R          PLRKRDIPTPIIATVPGYEAEQ+ DF+VPDGYIR+PRR  GEDDVATC+Y LEMEDEEWLEKHPRYGL+                 D DKLE MLGILEM TGQADPIPLPQA             VHHDAWTEVYRFWKDKRSR+GKPLLR+FWPVTPSNDTDPHKVFRPREKERYKLRKHRKNDLDSFRKLQQVKKDFEK  +   +R  +R+SSRK+ XXXXXXX   XXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXX         EDG   SFG+IPGSHV+VLPSFMDDLKTR ++PVRTVVEPALAVYTALGG+  KG     XXXXXXXXXXXXXXXX       RVGVEPVYKFRLRGRIGRGGRV+WDRVP++GA PAR+DGLADPEEAP+VVHSSYVQFPFKPPSAHVLHPPMVNLN
Sbjct:   19 GVLGESEARAEGGRATVVPPLRKRDIPTPIIATVPGYEAEQTSDFQVPDGYIRFPRRAGGEDDVATCEYSLEMEDEEWLEKHPRYGLSGPPSEKGKL--------DVDKLEQMLGILEMGTGQADPIPLPQA-------------VHHDAWTEVYRFWKDKRSRMGKPLLRRFWPVTPSNDTDPHKVFRPREKERYKLRKHRKNDLDSFRKLQQVKKDFEKQQL-ERSRDGERTSSRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYGDEXXXXXXXXXXXXXXXXGGVASVG--EDG-GGSFGIIPGSHVTVLPSFMDDLKTRESIPVRTVVEPALAVYTALGGRDAKGXXXXXXXXXXXXXXXXXXXXX------XRVGVEPVYKFRLRGRIGRGGRVIWDRVPVRGAVPAREDGLADPEEAPVVVHSSYVQFPFKPPSAHVLHPPMVNLN 443
[Close]
BLAST of mRNA_L-elsbetiae_contig9162.18187.1 vs. uniprot
Match: A0A835YT95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT95_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.440e-58
Identity = 150/408 (36.76%), Postives = 194/408 (47.55%), Query Frame = 2 
Query:   74 PLRKRDIPTPIIATVPGYEAEQSGDFRVPDGYIRYPRRTAGEDDVATCDYCLEMEDEEWLEKHPRYGLAAXXXXXXXXXXXXXXXXDDDKLELMLGILEMATGQADPIPLPQAETLFVSKLGMSKAVHHDAWTEVYRFWKDKRSRIGKPLLRKFWPVTPSNDTDPHKVFRPREKERYKLRKHRKNDLDSFRKLQQVKKDFEKV-SMYPHTRARDRSSSRKT--------KXXXXXXXASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEDGLAPSFGVIP---------GSHVSVLPSFMDDLKTRANMPVRTVVEPALAVYTALGGKGKGKSGVSXXXXXXXXXXXXXXXXGARGKAVRVGVEPVYKFRLRGRIGRGGRVMWDRVPI 1243
            P  ++DIP P  + V  Y  E + DF+ P+ YIRYP+R   E+D  + +Y L +EDE+WL  HP+YG                     D LE +L ILE  T     +    AE LF S+LGM K  +   W +VY +WK +R ++GKPLL++FWP T +NDTDPHKVFRPREKERYKLR+ R N+L+SF K+QQ+K+DF+K+ S+   TR R+R              +        S                                      XXXXXXXXX    G  PS G  P         G   ++LPSFMD+   R    +   VEPAL  +T                                   VR   EPV KFR RGRIGRGGRV++DRVP+
Sbjct:   40 PSVRKDIPAPRSSFVETYATELTPDFKPPNAYIRYPKRPISEEDSGSQEYSLLLEDEQWLASHPKYGRNGQL--------------SPDVLEQLLDILERGTAYGQLLSQSNAEALFTSQLGMEKHQYQAVWNDVYSYWKQRRQKLGKPLLQRFWPTTSANDTDPHKVFRPREKERYKLRRSRVNELESFNKMQQLKQDFDKLLSILELTRTRERIKQAALAVQQEVFDQAVYDLTNTSGEPRQLNIKPGEFKLKMRPPRPVVQALENFDEAAERLKXXXXXXXXXXXSRG-EPSTGQRPAAAAVGEGVGEDTALLPSFMDNFMNRTKASMSGRVEPALPAFT-----------------------------------VRGICEPVTKFRCRGRIGRGGRVVFDRVPV 397
[Close]
BLAST of mRNA_L-elsbetiae_contig9162.18187.1 vs. uniprot
Match: A0A2P4X1Y3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X1Y3_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.480e-44
Identity = 91/212 (42.92%), Postives = 124/212 (58.49%), Query Frame = 2 
Query:   80 RKRDIPTPIIATVPGYEAEQSGDFRVPDGYIRYPRRTAGEDDVAT---------CDYCLEMEDEEWLEKHPRYGLAAXXXXXXXXXXXXXXXXDDDKLELMLGILEMATGQADP--IPLPQAETLFVSKLGMSKAVHHDAWTEVYRFWKDKRSRIGKPLLRKFWPVTPSNDTDPHKVFRPREKERYKLRKHRKNDLDSFRKLQQVKKDFEKV 682
            RK+DIP P+I +VP Y+   S DF VP  Y+R+      ED   +          +  L++ED  WL +HP+YG+                    ++   ML  LE A+   +P  + L +AE +F  +LGM K   +    +VY +W  KR ++ +PLLR+FWP TP NDT+PH VFRPREKERYKLRKHRKNDL+ FRKLQQ++ DFE+V
Sbjct:   63 RKKDIPIPVILSVPTYDTSVSADFDVPTSYVRFQALPRDEDSAGSESLGPESQDVEVDLDLEDMRWLRRHPKYGVDGDPRYQLSL----------ERFGQMLDALEKASALLNPNVMTLAEAEDVFAKRLGMHKTPLNRVTCDVYAYWAAKRLKLRRPLLRRFWPQTPLNDTNPHAVFRPREKERYKLRKHRKNDLEGFRKLQQLRVDFERV 264
[Close]
BLAST of mRNA_L-elsbetiae_contig9162.18187.1 vs. uniprot
Match: D0NYV5_PHYIT (Enhancer of polycomb-like protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0NYV5_PHYIT)

HSP 1 Score: 166 bits (421), Expect = 2.540e-42
Identity = 90/212 (42.45%), Postives = 124/212 (58.49%), Query Frame = 2 
Query:   83 KRDIPTPIIATVPGYEAEQSGDFRVPDGYIRYPRRTAGEDDVATCDYC----------LEMEDEEWLEKHPRYGLAAXXXXXXXXXXXXXXXXDDDKLELMLGILEMATGQADP--IPLPQAETLFVSKLGMSKAVHHDAWTEVYRFWKDKRSRIGKPLLRKFWPVTPSNDTDPHKVFRPREKERYKLRKHRKNDLDSFRKLQQVKKDFEKV 682
            K+DIP P+I  VP Y+   S DF VP  Y+R+ +    ++D AT +            L++ED  WL +HP+YG+                    ++   ML  LE A+   +P  + L +AE +F  +L M K   +    +VY +W  KR ++ +PLLR+FWP TP NDT+PH VFRPREKERYKLRKHRKNDL+ FRKLQQ++ DFE+V
Sbjct:   64 KKDIPIPVILPVPSYDISVSADFEVPTSYVRF-QSLPRDEDAATSEALGPESQDVEVDLDLEDMRWLRRHPKYGVDGDPRYQL----------SQERFAQMLDALEKASALLNPNVMTLAEAEDVFAKRLEMRKTPLNRVTCDVYAYWAAKRQQLRRPLLRRFWPQTPLNDTNPHAVFRPREKERYKLRKHRKNDLEGFRKLQQLRVDFERV 264
[Close]
BLAST of mRNA_L-elsbetiae_contig9162.18187.1 vs. uniprot
Match: G4YJM1_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YJM1_PHYSP)

HSP 1 Score: 166 bits (421), Expect = 3.860e-42
Identity = 89/213 (41.78%), Postives = 122/213 (57.28%), Query Frame = 2 
Query:   80 RKRDIPTPIIATVPGYEAEQSGDFRVPDGYIRYPRRTAGEDDVATCDYC----------LEMEDEEWLEKHPRYGLAAXXXXXXXXXXXXXXXXDDDKLELMLGILEMATGQADP--IPLPQAETLFVSKLGMSKAVHHDAWTEVYRFWKDKRSRIGKPLLRKFWPVTPSNDTDPHKVFRPREKERYKLRKHRKNDLDSFRKLQQVKKDFEKV 682
            +K+DIP P+I +VP YE     DF VP  Y+R+      ++D A  +            L +ED  WL +HP+YG+                    ++   ML  LE A+   +P  + L +AE +F  +L M K   +    +VY +W  KR ++ +PLLR+FWP TP NDT+PH VFRPREKERYKLRKHRKNDL+ FRKLQQ++ DFE+V
Sbjct:   63 KKKDIPIPVILSVPTYETAVPADFEVPTSYVRFQALPRSDEDPAGLESLGPEPQDIELDLGLEDMRWLRRHPKYGVDGDPRYQL----------SQERFAQMLDALEKASALLNPNVMTLSEAEDVFAKRLNMHKTPLNRVTCDVYAYWAAKRQKLRRPLLRRFWPQTPLNDTNPHAVFRPREKERYKLRKHRKNDLEGFRKLQQLRVDFERV 265
[Close]
BLAST of mRNA_L-elsbetiae_contig9162.18187.1 vs. uniprot
Match: A0A225X147_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X147_9STRA)

HSP 1 Score: 165 bits (418), Expect = 9.740e-42
Identity = 90/214 (42.06%), Postives = 124/214 (57.94%), Query Frame = 2 
Query:   80 RKRDIPTPIIATVPGYEAEQSGDFRVPDGYIRYPRRTAGEDDVAT-----------CDYCLEMEDEEWLEKHPRYGLAAXXXXXXXXXXXXXXXXDDDKLELMLGILEMATGQADP--IPLPQAETLFVSKLGMSKAVHHDAWTEVYRFWKDKRSRIGKPLLRKFWPVTPSNDTDPHKVFRPREKERYKLRKHRKNDLDSFRKLQQVKKDFEKV 682
            RK+DIP P+I  VP Y+     DF VP  Y+R+  +T   D+ +T            +  L++ED  WL +HP+YG+                    ++   ML  LE A+   +P  + L +AE +F  +L M K   +    +VY +W  KR ++ +PLLR+FWP TP NDT+PH VFRPREKERYKLRKHRKNDL+ FRKLQQ++ DFE+V
Sbjct:   63 RKKDIPIPVILPVPTYDTSVPPDFEVPTSYVRF--QTLPRDEESTGLESLGPESQDVEVDLDLEDMRWLRRHPKYGVDGDPRYQL----------SQERFGQMLDALEKASALLNPNVMTLAEAEDVFAKRLAMHKTPLNRVTCDVYAYWAAKRQKLRRPLLRRFWPQTPLNDTNPHSVFRPREKERYKLRKHRKNDLEGFRKLQQLRVDFERV 264
[Close]
BLAST of mRNA_L-elsbetiae_contig9162.18187.1 vs. uniprot
Match: A0A425CE82_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CE82_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.430e-41
Identity = 91/212 (42.92%), Postives = 125/212 (58.96%), Query Frame = 2 
Query:   80 RKRDIPTPIIATVPGYEAEQSGDFRVPDGYIRY---PR--RTAGED----DVATCDYCLEMEDEEWLEKHPRYGLAAXXXXXXXXXXXXXXXXDDDKLELMLGILEMATGQADP--IPLPQAETLFVSKLGMSKAVHHDAWTEVYRFWKDKRSRIGKPLLRKFWPVTPSNDTDPHKVFRPREKERYKLRKHRKNDLDSFRKLQQVKKDFEKV 682
            +K+DIP P+I +V  YE   S DF VP  Y+R+   PR    AG +    +    +  L++ED  WL +HP+YG+                    ++   ML  LE A+   +P  + L +AE +F  +L M K   +    +VY +W  KR ++ +PLLR+FWP TP NDT+PH VFRPREKERYKLRKHRKNDL+ FRKLQQ++ DFE+V
Sbjct:   63 KKKDIPIPVILSVSSYEVSVSADFDVPTSYVRFQALPRDENAAGSETSNSESPDVEVDLDLEDMRWLRRHPKYGVDGDPRYQV----------SQERFGQMLDALEKASALLNPNVMTLAEAEEVFARRLNMHKTPLNRVTCDVYAYWAAKRQKLRRPLLRRFWPQTPLNDTNPHSVFRPREKERYKLRKHRKNDLEGFRKLQQLRVDFERV 264
[Close]
BLAST of mRNA_L-elsbetiae_contig9162.18187.1 vs. uniprot
Match: H3GTE9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTE9_PHYRM)

HSP 1 Score: 165 bits (417), Expect = 2.000e-41
Identity = 89/212 (41.98%), Postives = 119/212 (56.13%), Query Frame = 2 
Query:   80 RKRDIPTPIIATVPGYEAEQSGDFRVPDGYIRYPRRTAGEDDVAT---------CDYCLEMEDEEWLEKHPRYGLAAXXXXXXXXXXXXXXXXDDDKLELMLGILEMATGQADPIPLPQAET--LFVSKLGMSKAVHHDAWTEVYRFWKDKRSRIGKPLLRKFWPVTPSNDTDPHKVFRPREKERYKLRKHRKNDLDSFRKLQQVKKDFEKV 682
            RK+DIP P+I  VP Y+     DF  P  Y+R+      ED   +          +  L++ED  WL +HP+YG+                    D    ML  LE A+   +P  + QAE   +F  +LG+ K   +    +VY +W  KR ++ +PLLR+FWP TP NDT+PH VFRPREKERYKLRKHRKNDL+ FRKLQQ++ DFE+V
Sbjct:   63 RKKDIPIPVILAVPTYDISVPADFEAPTSYVRFQALPRDEDSSGSEALGPEPQDVEVDLDLEDMRWLRRHPKYGVDGDPRYQV----------SQDCFAQMLDALEKASALLNPNVMTQAEAEDVFSKRLGLHKTPLNRVTCDVYAYWAAKRQKLRRPLLRRFWPQTPLNDTNPHSVFRPREKERYKLRKHRKNDLEGFRKLQQLRVDFERV 264
[Close]
BLAST of mRNA_L-elsbetiae_contig9162.18187.1 vs. uniprot
Match: A0A6G0WXC2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXC2_9STRA)

HSP 1 Score: 161 bits (408), Expect = 8.780e-41
Identity = 96/213 (45.07%), Postives = 126/213 (59.15%), Query Frame = 2 
Query:   74 PLRKRDIPTPIIATVPGYEAEQSGDFRVPDGYIRYP---RRTAGEDDVA--TCDYC---LEMEDEEWLEKHPRYGLAAXXXXXXXXXXXXXXXXDDDKLELMLGILEMATGQADP--IPLPQAETLFVSKLGMSKAVHHDAWTEVYRFWKDKRSRIGKPLLRKFWPVTPSNDTDPHKVFRPREKERYKLRKHRKNDLDSFRKLQQVKKDFEKV 682
            P RK++IP PI  TVP YE E S DF +P  YI+     + ++  + VA  T D     LE+ED EWL  HPRYG  A                  D    ML +LE A+   +P  I L +A+ +F  KL + K+  H   T++Y +W  KR  + +PLLRK+WP TP NDT+PH VFRPREK RYKLRKHRKND++  RKLQQ++ DF++V
Sbjct:   60 PKRKKNIPIPINKTVPNYEKEVSPDFHLPTSYIKLSLNFQNSSSSNAVAQPTSDKVEIDLEVEDIEWLRAHPRYGELADPRYQLSL----------DIFATMLDLLEKASALINPSVITLAEADEIFSKKLQLVKSPCHKVSTDIYNYWVAKRQLLKRPLLRKYWPQTPLNDTNPHLVFRPREK-RYKLRKHRKNDMEGLRKLQQLRNDFDRV 261
[Close]
BLAST of mRNA_L-elsbetiae_contig9162.18187.1 vs. uniprot
Match: A0A0N7L5B9_PLAHL (Enhancer of polycomb-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5B9_PLAHL)

HSP 1 Score: 160 bits (406), Expect = 3.440e-40
Identity = 88/212 (41.51%), Postives = 122/212 (57.55%), Query Frame = 2 
Query:   80 RKRDIPTPIIATVPGYEAEQSGDFRVPDGYIRY---PRRTAGED------DVATCDYCLEMEDEEWLEKHPRYGLAAXXXXXXXXXXXXXXXXDDDKLELMLGILEMATGQADP--IPLPQAETLFVSKLGMSKAVHHDAWTEVYRFWKDKRSRIGKPLLRKFWPVTPSNDTDPHKVFRPREKERYKLRKHRKNDLDSFRKLQQVKKDFEKV 682
            +K+DIP P+I  V  Y+   S DF +P  Y+R+   PR     D      ++   +  L++ED  WL +HP+YGL                    ++   ML  LE A+   +P  + L +AE +F  +L M K   +    +VY +W  KR ++ +PLLR+FWP TP NDT+PH VFRPREKERYKLRKHRKNDL+  RKLQQ++ DFE+V
Sbjct:   63 KKKDIPIPVILPVSTYDNSVSADFDIPTSYVRFQPLPRDEHAVDLDTFGPELQNVEVDLDVEDMRWLRRHPKYGLDGDPRYQL----------SQERFAQMLDALEKASALLNPNVMTLAEAEDVFAKRLNMYKTPLNRVTCDVYAYWAAKRQKLRRPLLRRFWPQTPLNDTNPHAVFRPREKERYKLRKHRKNDLEGLRKLQQLRVDFERV 264
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9162.18187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLB0_ECTSI5.910e-17274.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YT95_9STRA2.440e-5836.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2P4X1Y3_9STRA4.480e-4442.92Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
D0NYV5_PHYIT2.540e-4242.45Enhancer of polycomb-like protein n=13 Tax=Phytoph... [more]
G4YJM1_PHYSP3.860e-4241.78Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A225X147_9STRA9.740e-4242.06Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A425CE82_9STRA1.430e-4142.92Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
H3GTE9_PHYRM2.000e-4141.98Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6G0WXC2_9STRA8.780e-4145.07Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A0N7L5B9_PLAHL3.440e-4041.51Enhancer of polycomb-like protein n=1 Tax=Plasmopa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9162contigL-elsbetiae_contig9162:570..7366 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size1382
Cds size837
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9162.18187.1prot_L-elsbetiae_contig9162.18187.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9162 1948..7366 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816990.462876-UTR-L-elsbetiae_contig9162:569..7591622816990.462876-UTR-L-elsbetiae_contig9162:569..759Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9162 570..759 -
1691683965.6878047-UTR-L-elsbetiae_contig9162:569..7591691683965.6878047-UTR-L-elsbetiae_contig9162:569..759Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9162 570..759 -
1622816990.4740925-UTR-L-elsbetiae_contig9162:1593..19471622816990.4740925-UTR-L-elsbetiae_contig9162:1593..1947Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9162 1594..1947 -
1691683965.701372-UTR-L-elsbetiae_contig9162:1593..19471691683965.701372-UTR-L-elsbetiae_contig9162:1593..1947Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9162 1594..1947 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816990.4842994-CDS-L-elsbetiae_contig9162:1947..20761622816990.4842994-CDS-L-elsbetiae_contig9162:1947..2076Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9162 1948..2076 -
1691683965.7183814-CDS-L-elsbetiae_contig9162:1947..20761691683965.7183814-CDS-L-elsbetiae_contig9162:1947..2076Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9162 1948..2076 -
1622816990.4943798-CDS-L-elsbetiae_contig9162:3256..33901622816990.4943798-CDS-L-elsbetiae_contig9162:3256..3390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9162 3257..3390 -
1691683965.7322443-CDS-L-elsbetiae_contig9162:3256..33901691683965.7322443-CDS-L-elsbetiae_contig9162:3256..3390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9162 3257..3390 -
1622816990.505036-CDS-L-elsbetiae_contig9162:4755..48811622816990.505036-CDS-L-elsbetiae_contig9162:4755..4881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9162 4756..4881 -
1691683965.7458868-CDS-L-elsbetiae_contig9162:4755..48811691683965.7458868-CDS-L-elsbetiae_contig9162:4755..4881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9162 4756..4881 -
1622816990.5151951-CDS-L-elsbetiae_contig9162:5780..59961622816990.5151951-CDS-L-elsbetiae_contig9162:5780..5996Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9162 5781..5996 -
1691683965.7563868-CDS-L-elsbetiae_contig9162:5780..59961691683965.7563868-CDS-L-elsbetiae_contig9162:5780..5996Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9162 5781..5996 -
1622816990.5252306-CDS-L-elsbetiae_contig9162:6296..64061622816990.5252306-CDS-L-elsbetiae_contig9162:6296..6406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9162 6297..6406 -
1691683965.7672176-CDS-L-elsbetiae_contig9162:6296..64061691683965.7672176-CDS-L-elsbetiae_contig9162:6296..6406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9162 6297..6406 -
1622816990.5392191-CDS-L-elsbetiae_contig9162:7244..73661622816990.5392191-CDS-L-elsbetiae_contig9162:7244..7366Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9162 7245..7366 -
1691683965.778359-CDS-L-elsbetiae_contig9162:7244..73661691683965.778359-CDS-L-elsbetiae_contig9162:7244..7366Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9162 7245..7366 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9162.18187.1

>prot_L-elsbetiae_contig9162.18187.1 ID=prot_L-elsbetiae_contig9162.18187.1|Name=mRNA_L-elsbetiae_contig9162.18187.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=279bp
GGERCKRGVRGDRAGGGGRGSRGAPSPQERHPHADHRDSARIRGGTVGRL
PGARRLHPVPTEDGGRRRRRDLRLLLRNGRRGVAGEAPSVRPCGGGGGGR
HLRQEEREAAGRRQAGADAGHPGDGDGAGGPHPAAAGRDALRVEAGHEQG
GAPRRLDGGLSVLEGQEVSNREAVAAKVLACHAFQRHGPPQGVSPQREGT
VQAEKAPEERLGQLPKAAAGQEGLREGKHVSAHARAGSLFLPENKEAEGE
RPGIESGRRRRRRRRGGGWGGRSLRGRR*
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mRNA from alignment at L-elsbetiae_contig9162:570..7366-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9162.18187.1 ID=mRNA_L-elsbetiae_contig9162.18187.1|Name=mRNA_L-elsbetiae_contig9162.18187.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6797bp|location=Sequence derived from alignment at L-elsbetiae_contig9162:570..7366- (Laminarionema elsbetiae ELsaHSoW15)
GGCGGCGAGAGGTGCAAACGGGGCGTTCGGGGAGACCGAGCGGGGGGGGG
GGGGCGGGGGAGCCGCGGCGCCCCCTCTCCGCAAGAGAGACATCCCCACG
CCGATCATCGCGACAGTGCCAGGCGAGTGAGCCAGTTGCAGAGGAAGAGT
TCTATAACTGGTCGTGACACCCGCGAACTCGAGTTATGTAAGCTTACCTA
TATAGGAGTAAACAGGATGACGATTCCTTGACAGCAACCGATATAGCTAC
GGGCGTTATGTACCGTATATGACACAAGATAACACACCCCCTGGGCCGAC
TTTCAAAGCTCGGTTTCTCCGCAACGAATATGACTCTGGTACCAAACGAC
ACGTTTTCGGACAGCTCGTAATGAGATCTTTCCAACGCCGCCCTTTTCGG
GACTGACACTCTTCTCGCTGCGGAGTACTTGAGCTTTGAAAGTCGGTCCA
GGGGGTGTGTTATCTTGTGTCATATACGGTAGTTGGCCCACTTCTGTTAC
AGCTCTTTGGCTTTTTGTGTGACAAAAAAGACGATGGCGACGAATCATCA
GCGGGTCTCCCTCCCGCAAACAAGCGTGCAGGCAGACAAGAGCCTTTTCA
GAAAAAAACTTAGAACTATTTATTCGTCGCTCGTTTAACGCGGTTACTAT
GATACCAACCTGTGTGACCCCGGTTGGGTCGTCTAGCTAGTCGTAGTGGA
GGAAGGGTGCCAGTGTGGCAGACGATGAATAAGCCAAAAATGAAAAAAAA
TAATTACCAACCACGAAGCAAAACCTTGCAGAAAGAAAATGCCCCACACC
TGGTACTACTACTGCTGTTTTATGCCCAAAATGTATTTTCTACGTTCATG
CGTACGGTGTCTTGTCTGTTTGGTTCAGCATTAACTTATGCTTCGTTGGA
AACACGGCTACTTGTGTGTTTGTCGGTCTGGTAAACCCACCCACAAATGA
TTAACCGCAGGATACGAGGCGGAACAGTCGGGAGACTTCCGGGTGCCCGA
CGGTTACATCCGGTACCCACGGAGGACGGCGGGCGAAGACGACGTCGCGA
CCTGCGACTACTGCTTAGAAGTGAGTCCGCAGTAGGTCGAGGGGCCTCGC
AGCAGCGCAAATCGCTGGTGATGCGCCATGTTATTGTTCTGTTTGCTGCT
GCTGCTGCTGCTGCTATTGCTATCGCAATCTATGTTTCTACACACTTCGG
CCCGTATTATCCCCCCCCACTTTCCGCTGCCCCCCTGCCGCCTATTCCCC
CGCTTTTCCAATATTTACATCACAAATCATTTTCTATTCCGCCCCCCTAC
CCACCCCCCTACCCACCCCCCTACCCACCCTCATACCCACCCCCCTACCC
ACCCACCCCACCTTTCCAAGATGGAAGACGAGGAGTGGCTGGAGAAGCAC
CCTCGGTACGGCCTTGCGGCGGCGGCGGCGGCGGCCGACACCTCCGACAA
GAAGAAAGAGAGGCTGCTGGACGACGACAAGCTGGAGCTGATGCTGGGCA
TCCTGGAGATGGCGACGGGGCAGGCGGACCCCATCCCGCTGCCGCAGGCC
GAGACGCTCTTCGTGTCGAAGCTGGGCATGAGCAAGGTCAGTCTGTCGGT
CTGTCGGTCGGTTCGTCGGTCGGTTGGTCCATCGGTACTTCTGTCCGTCG
GTCTTTCTGTCCGTCGGTCTGTCGGTCGGTCGGTCGGCCGGTCCGTCGGT
CGGTTGGTGCGTCGGTCGGTCGGTCCGTCGGTGCGTCAGCGTCTTTTTCT
GCCTCGTTGTCTCTCCTCTCCTCGGGGAGGGAGTCAGTGTCAATGCCCCC
AAGGTGGTTCGCTCTTGCGTATGTAGTTATGTACATGCATCCTTGTTTTT
GGTGTTTTTTTTTCCGTGTGTGTGTGCGTGTGTGTGTGTGTTTGTATTGG
TTTCTACGGCTGGTGCGGCTTAACAAGAGCTTTATTTGCGGAGCTTTTTC
TTGTGCACAGGCAGTCTTACTCACCCCGAGTGTGCCCAAGATCGCGCGAA
CACCCCCAAAACAAAAAGGGTCGAACCAGAAGTATGTGGAAAGTTGTTGG
CTCTCTTTTTCGGCTTTGGCGGGGCGGGGCGCATTGGTAAACTTGATGCA
CAGGTAGCAGCATCAGCAGCGCAAGAGGCATCGAATTTTTTAAGCACTGT
CACAGTCACACCCGTTCGACATTCGCTCTCTCGGGGCATTATTTAGTATT
TGTTTCTCATGTGTACCCCCGCGTCCGCTTTGCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACGGGCGGGGGGTGTCG
CTATTTGGAGGGAAGAAGGGATTGGCAAGGTGGATGATGTGTATCGCNNN
NNNNNNNTTTAAGCCCTCTCCCGGTCCCCCCCTTTCGCCATTCTCCCGCT
CGGGGCATTTTTTTGTTTTTTTTTCTCATGTGTCCCCCCCCGCCCGCTTT
GCCCCCCCCCCCCCCCCTCCCGGCCCCGCTCGCAGGCGGTGCACCACGAC
GCTTGGACGGAGGTTTATCGGTTTTGGAAGGACAAGAGGTCTCGAATAGG
GAAGCCGTTGCTGCGAAAGTTCTGGCCTGTCACGCCTTCCAACGACACGG
ACCCCCACAAGGTGCGGCGCGTTGCGGTTCCACTCACCCTCGTGTGTGCT
TGGAGTGGATTTGTTCGTTCCAATGGGGGCCTCGGGGAAAGGAACCCTTC
TGTGTGACCACGGTTCAGTACTCTCGTAAGATGCCCTTGTGGCAAGAGGC
ACATCGAGCACTGGAAATTAATTTGAAGGAGAAAAAAAACACACACACAC
AAACACACCAACACAAACTCAAAACTCCGATAGAGTGAGTCAGGCTCCCG
TGGGTAGGCATTTTTTTCAGTAGACTACAAACATCTACAACTGTTCTACA
TGCAAGTGTCAGCGGTCTACCTATATACGTCCACACTGCTGTTCGAACAA
TAGTTTTGACAATTGTTCTATTTACATGCAAGTGTCAGCGGTCTACCTAT
CACACTGCTGTTAAAAAATAGTTTTTACAAATGTTTCTACAGTGCAAGTG
TCAGCGGTCTACCTATATACGTCCACACTGCTGTTAAAAAATAGTTTTTA
CAAATGTTCTATAGTGCAAGTGTCAGCGGTCTACCTATAATACGTCCACA
CTGCTCTTAAAAAATAGTTTTTACGGGTTCCAGGGGGACTAATCACGTTG
TAGACACAAAATATTAGTCCATCCCGTACTGGTTTTGTTGGTTTCAGAGG
GACTACAATACTGTTGTTGTATCTACTAGACACAAGATGCCACCAAAGCC
TTTTTTTTCCGACTCGCGGTGCACCGCCCTCGAAGCTCCCGAGGCTATGT
ATGTACCTGGCAAATAGGTGTCCGGTGCCAACCCCAACCCTTCCTTTCTG
ACCGTTTCATAATACTGCAGGCGCAAACAAATATAAAATATCCGTGCAGC
AGTTCGCTGGTGGCTACATAGTTTGTGGGTCTTGTGTGTGCGTGTGTTTT
TCTCTCGCTCGGGACGCCTGCTAGTCCCACGCTCTTTTCTCTCTCTCTCT
CTATCTCTCTCTCTCTATCTATCTCTCTCTATCTCTTATCTCTATCTCTC
TCTCTGTAGCGTTTTTTTTCCCCACCGGCGAGCAAGAGCTGCTTTGGGTT
GTTGCTGTCCGCTGTTGGCGACGTATTGAATGCCGGTTTGTTTTTATTGG
TGTTTACAAGTGTGTCAGCAGTCTACTTACGTACGTCCAGTCTGCGAAGA
AGTCGTTCCAGAGGGACTGCTGTCTGTTTGTAGGCCTAGACACTACTAAC
CCCCTTGTGTTCCCCCATCCAAGATATACTCGGCACAACATTTTCCTGCT
GTTTTGGACGAATTTCCTCGGCGTGTTCGGAAGCGGTGCGATGCTCAGCG
CGCTTTTTTCTCGGTATGGTATTTTGTCTCGTTGTCCCTTCTTCTTCGCA
AACAAAACCTGCGCTTCTTTCGCCAGGTGTTTCGCCCCAGAGAGAAGGAA
CGGTACAAGCTGAGAAAGCACCGGAAGAACGACTTGGACAGCTTCCGAAA
GCTGCAGCAGGTCAAGAAGGACTTCGAGAAGGTAAGCATGTATCCGCACA
CGCGCGCGCGGTGTTGTCGTTGTTGTTGTTGTTGTTGTTGTTGACAGTTG
TAGTCGCGTTTGTCGTCGTTGTTTTTAGGTGGTTGGTGGTAGTAGTGGTG
GTGGTGTTGGTGCCTGTTACCCCGCTCCCATCGCGGTATCTCCCTCGTAC
ACATCTGTAAACAACAGTATTCTGTTTTGCGATCGTTCATCCACTGTTGC
CGTTGTTCATCTGTCGAGAAACGTGCCCCATTCACCGTTCGAGCACCGTG
TTTTCCGCGTTGGCGTACCCCCGTTTCCCCCGCAAAAACACCGGCGTGCC
CAACTTTCCAACTATCCGTCCGAACCACCAATCCCCCCCACCCCGCCCCG
CCCCAGCTTCTGAGCATCACGAGGATGATCCAAAAGAGGGAGATGATGAA
GCGGGAGCAGCTGATGGTGCAGCAGGAGATATTTCTGCAGCAGCACTGGG
ACCTCACCGATACGACGGGGGAGTCCAGGCCTCTGGGCATCGAGCCCGGC
AAGTACAAGGCGAGGCCACGGCAGCCACCGCCGGCGGTGGCCGCAGCGGC
GGCGGCGGCGGCCGCGGCTTCTACGGCAACGGCGGCAGCCGGCGGGGCAG
CCGGCGCGGCCGGTGTTCCGGTGGCGGCCCCGCAGCCGGTGGCGCCAGTA
CAGGTACGGGGGGGGGGGGGGGGGGGAAGCGCCCGCGGAGGAAGGGGGCG
CGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGTGGCCGGGCGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTAGTGA
TATGGAGAAGGAATAAGGGGCGGAAAGGCATACGGCGTGGGGAGCAGGGA
TCTTCGAGATGTGACTTCCATATGTCGTGATTCGCAGCGGCGGCAGTGAC
AGCGTGTAGGCGTAGTATGTATGTATGTATGTGCCGTTTCTATTCGTGTA
CATACGTGTAAATACTTCTTGTGTACATAACCTACATTATGTACGTCAAA
AACATTGGTATGATTGGTTTCTTTCGGGGGGGGCCCTCTAGCCTGCTGTT
GGCGTGCTCTTTCCCGCCCACGTTTGATGCGCCTCCCCCCTTCCTCCCCC
CAACCCCACCGCCCCCCGATGCCCGCCTGGCCCTCTTTTCCTGCCCTCCG
CGTCCCACCCGCAGCCGTTCGAGAAGGTGCGGGATGAGAGGGATCGCTCT
TCCTCCCGGAAAACAAAGAAGCGGAAGGAGAGAGACCGGGCATCGAGAGC
GGCCGGCGGCGGCGGCGGCGGCGGCGGGGGGGGGGGTGGGGTGGACGATC
ACTACGGGGACGAAGATGACGAAGGCGACGACTACTCGGCCTCGGCGGCG
GCGGCGGCGGCGGGGGGGGCGGGGGCGGGAGGGGGTGCCGTGGAGGACGG
GTTGGCGCCCTCCTTCGGCGTGATCCCCGGGTCTCACGTGAGCGTGCTCC
CGTCCTTCATGGACGACCTCAAGACGAGGGCGAACATGCCCGTGAGGACG
GTGGTCGAGCCCGCCCTGGCGGTGTACACGGCCTTGGGCGGCAAGGGCAA
GGGCAAGAGCGGGGTCTCGCTTGGCGGCAGTGGCGCGAGAGAAAGAGAAA
GATCGACGGCAGGGGGAGGGGCGAGGGGGAAAGCAGTGCGCGTGGGGGTG
GAGCCGGTGTATAAATTCAGACTGTGAGTGAAATCGTCCGGCCTGTGGGC
GGGGAGGGGCGGGGCGGGGAGTGTAGACAGCGTGGTGTACGTGGCTTGAG
CCAGCGTGCCCCGTGCCTTCCTTGCTTGAATGCGGGCGGCGGGTCTTTAT
GGATCGGGTTTCGCACGAGTGTTGTGTGTGTTTTCGTCAGCGGTCGTCGG
GCTGTTTGTTGCCGCGTCTTGTGCAGCCGAGGTGGACGCGGTCCATAGGC
AATAAAGAAGTGGGGTTTTATTTCTAGTTTTTGTGCCATGTTTTGTTGCA
TATTTTTGTTGCATTGTTTTTGTTTTTTGCACTTTTGGTGTGCAAGCGGC
AGCAGGCCCCAACCCCCACCTCCCTCCTGGCAGCAGCAGCCCCCCGCCCC
CTCGTGCCTTGGCTCGCGCGTGTGTGGAGGTGTTCTCGTGGCCGCCGGAC
GGATGTCTTCTCAAGCCTGCTTGCTTGGTTCGCCGCGGCTCGCCGTGTTG
TCTGCTCACCCTGCGCCGCACACGCGTCCCCGGTTTCGTTTTGTTTGTTT
GCTGCATGCATGCATGCAATGCAAGCTGCGGGTTGAGTTTTTCTGTTTTG
GCGCAACCCGACGAACGAAGCACGAGACGCCTCGATCCCACACCATCCCC
AACACACCCTCACCTACGTAGCCCCCTTTCCCTCCATGCCCCCCCCCACC
CCCCACCCCGTCTTTTTTCTCCTTCCGTTTTCTGCCCCTTGGTTACAATA
ATTGGTTCCCCATATTCGTCGCCCCTTCCAATGAACGACAAACACCACCG
ACGATCACGCCGCCGCTACCAACAACAACAACCACGACAACGTCGCAACA
ACGCCAGACGAGGCCGGATCGGCCGTGGCGGGCGGGTGATGTGGGACCGC
GTGCCCATCAAGGGGGCTCCGCCCGCGAGAGACGACGGGCTGGCGGACCC
CGAGGAGGCGCCGCTCGTGGTGCACAGCAGCTACGTCCAGTTCCCCTTCA
AGCCTCCGTCGGCCCACGTTCTGCACCCCCCGATGGTCAACCTCAAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9162:570..7366-

>mRNA_L-elsbetiae_contig9162.18187.1 ID=mRNA_L-elsbetiae_contig9162.18187.1|Name=mRNA_L-elsbetiae_contig9162.18187.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1674bp|location=Sequence derived from alignment at L-elsbetiae_contig9162:570..7366- (Laminarionema elsbetiae ELsaHSoW15)
GGCGGCGAGAGGTGCAAACGGGGCGTTCGGGGAGACCGAGCGGGGGGGGG
GGGGCGGGGGAGCCGCGGCGCCCCCTCTCCGCAAGAGAGACATCCCCACG
CCGATCATCGCGACAGTGCCAGGGCGGCGAGAGGTGCAAACGGGGCGTTC
GGGGAGACCGAGCGGGGGGGGGGGGGCGGGGGAGCCGCGGCGCCCCCTCT
CCGCAAGAGAGACATCCCCACGCCGATCATCGCGACAGTGCCAGGATACG
AGGCGGAACAGTCGGGAGACTTCCGGGTGCCCGACGGTTACATCCGGTAC
CCACGGAGGACGGCGGGCGAAGACGACGTCGCGACCTGCGACTACTGCTT
AGAAGATACGAGGCGGAACAGTCGGGAGACTTCCGGGTGCCCGACGGTTA
CATCCGGTACCCACGGAGGACGGCGGGCGAAGACGACGTCGCGACCTGCG
ACTACTGCTTAGAAATGGAAGACGAGGAGTGGCTGGAGAAGCACCCTCGG
TACGGCCTTGCGGCGGCGGCGGCGGCGGCCGACACCTCCGACAAGAAGAA
AGAGAGGCTGCTGGACGACGACAAGCTGGAGCTGATGCTGGGCATCCTGG
AGATGGCGACGGGGCAGGCGGACCCCATCCCGCTGCCGCAGGCCGAGACG
CTCTTCGTGTCGAAGCTGGGCATGAGCAAGATGGAAGACGAGGAGTGGCT
GGAGAAGCACCCTCGGTACGGCCTTGCGGCGGCGGCGGCGGCGGCCGACA
CCTCCGACAAGAAGAAAGAGAGGCTGCTGGACGACGACAAGCTGGAGCTG
ATGCTGGGCATCCTGGAGATGGCGACGGGGCAGGCGGACCCCATCCCGCT
GCCGCAGGCCGAGACGCTCTTCGTGTCGAAGCTGGGCATGAGCAAGGCGG
TGCACCACGACGCTTGGACGGAGGTTTATCGGTTTTGGAAGGACAAGAGG
TCTCGAATAGGGAAGCCGTTGCTGCGAAAGTTCTGGCCTGTCACGCCTTC
CAACGACACGGACCCCCACAAGGCGGTGCACCACGACGCTTGGACGGAGG
TTTATCGGTTTTGGAAGGACAAGAGGTCTCGAATAGGGAAGCCGTTGCTG
CGAAAGTTCTGGCCTGTCACGCCTTCCAACGACACGGACCCCCACAAGGT
GTTTCGCCCCAGAGAGAAGGAACGGTACAAGCTGAGAAAGCACCGGAAGA
ACGACTTGGACAGCTTCCGAAAGCTGCAGCAGGTCAAGAAGGACTTCGAG
AAGGTAAGCATGTATCCGCACACGCGCGCGCGGTGTTTCGCCCCAGAGAG
AAGGAACGGTACAAGCTGAGAAAGCACCGGAAGAACGACTTGGACAGCTT
CCGAAAGCTGCAGCAGGTCAAGAAGGACTTCGAGAAGGTAAGCATGTATC
CGCACACGCGCGCGCGGGATCGCTCTTCCTCCCGGAAAACAAAGAAGCGG
AAGGAGAGAGACCGGGCATCGAGAGCGGCCGGCGGCGGCGGCGGCGGCGG
CGGGGGGGGGGGTGGGGTGGACGATCACTACGGGGACGAAGATGAGGATC
GCTCTTCCTCCCGGAAAACAAAGAAGCGGAAGGAGAGAGACCGGGCATCG
AGAGCGGCCGGCGGCGGCGGCGGCGGCGGCGGGGGGGGGGGTGGGGTGGA
CGATCACTACGGGGACGAAGATGA
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