mRNA_L-elsbetiae_contig9130.18160.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9130.18160.1
Unique NamemRNA_L-elsbetiae_contig9130.18160.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9130.18160.1 vs. uniprot
Match: D7FHZ1_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ1_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 4.220e-49
Identity = 72/90 (80.00%), Postives = 82/90 (91.11%), Query Frame = 1
Query:  229 MVEQDTICLLDFYVHESLQRQGIGSDLFQLALKEEGLTPTDIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMIFKEHFGGIAARLAKQGG 498
            M+E+DT+CLLDFYVHES+QR+G+G DLF+ ALKEEGLTPT+IAYDRPSPKLKPFLGKHFGLHNCLDQPNRFM+FKEHF G A R  +Q G
Sbjct:    1 MIEKDTMCLLDFYVHESVQRRGLGLDLFKSALKEEGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHFEGAAKRSKQQAG 90          
BLAST of mRNA_L-elsbetiae_contig9130.18160.1 vs. uniprot
Match: A0A835Z9U1_9STRA (Alpha-tubulin N-acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9U1_9STRA)

HSP 1 Score: 132 bits (332), Expect = 5.060e-36
Identity = 72/161 (44.72%), Postives = 99/161 (61.49%), Query Frame = 1
Query:    7 LDSRDSKVFDEAVNEMGLLSSKAQEQTTPLTTADKVRERADTIYVMCDG-TGATLQAFLRLGRKHLFLYPDDGGEMVEQDTICLLDFYVHES---LQRQGIGSDLFQLALKEEGLTPTDIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMIFKEHFGGIAA 477
            L ++   V   A+ E+G LS++AQ    P+TT  ++      +YVMCD  TG T   +LR+G K L+L  D    +  +D +CLLDFYVH      QRQG+G  LF   LK E +T   +AYDRPSPKL+PFL +H+GL   +DQPNRFM+F ++F   A+
Sbjct:   23 LSAQQQDVATAALAELGALSAQAQGLKEPITTLQQLVTSEHRLYVMCDEVTGRTCYGYLRVGVKRLYL-TDGAAPLRPRDALCLLDFYVHHRQVWCQRQGMGRRLFNAMLKSENVTAEQLAYDRPSPKLRPFLKRHYGLAQGIDQPNRFMVFPQYFRADAS 182          
BLAST of mRNA_L-elsbetiae_contig9130.18160.1 vs. uniprot
Match: W4GS86_9STRA (Alpha-tubulin N-acetyltransferase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GS86_9STRA)

HSP 1 Score: 119 bits (297), Expect = 4.730e-31
Identity = 63/142 (44.37%), Postives = 87/142 (61.27%), Query Frame = 1
Query:   37 EAVNEMGLLSSKAQEQTTPLTTADKVRERADTIYVMCDGTGATLQAFLRLGRKHLFLYPDDGGEMVEQDTICLLDFYVHESLQRQGIGSDLFQLALKEEGLTPTDIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMIFKEHF 462
            + V+ +GL S++AQ    PLT+   V E+  T+Y+  D T       L++GRKHLF Y    G  +E D +C+LDFYVH   QR G+G  LF   L+ E + P  +AYDRPSPKL PFL KHF L + + Q NRF+++  +F
Sbjct:   20 DTVDALGLGSAEAQHLKAPLTSVALVLEQQHTLYIAHDTT--VPWGVLKVGRKHLF-YSKPRGGFIEMDPLCVLDFYVHPDRQRHGLGLHLFTSMLERESVAPHQLAYDRPSPKLFPFLRKHFKLDSYVPQSNRFVVYDAYF 158          
BLAST of mRNA_L-elsbetiae_contig9130.18160.1 vs. uniprot
Match: A0A485LT96_9STRA (Alpha-tubulin N-acetyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LT96_9STRA)

HSP 1 Score: 119 bits (298), Expect = 5.530e-31
Identity = 64/137 (46.72%), Postives = 87/137 (63.50%), Query Frame = 1
Query:   52 MGLLSSKAQEQTTPLTTADKVRERADTIYVMCDGTGATLQAFLRLGRKHLFLYPDDGGEMVEQDTICLLDFYVHESLQRQGIGSDLFQLALKEEGLTPTDIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMIFKEHF 462
            +G  S++AQ   TP+T+   VRE   T+Y+  +  G  +   L++GRKHL+     GG  +E D +CLLDFYV   LQR GIG  +FQ  L  E +    +AYDRPSPKL PFL KHFGL + +DQPNR+++F  +F
Sbjct:   41 LGHGSAEAQLLKTPITSVALVREHKHTLYIAYNEDGEAI-GLLKVGRKHLYYTKAKGG-FLEIDPLCLLDFYVRPDLQRHGIGLAMFQHMLANEHVGAHALAYDRPSPKLLPFLRKHFGLTDHVDQPNRYVVFDAYF 175          
BLAST of mRNA_L-elsbetiae_contig9130.18160.1 vs. uniprot
Match: A0C6C2_PARTE (Alpha-tubulin N-acetyltransferase n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0C6C2_PARTE)

HSP 1 Score: 121 bits (303), Expect = 6.150e-31
Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 1
Query:   13 SRDSKVFDEAVNEMGLLSSKAQEQTTPLTTADKVRERADTIYVMCDGTGATLQAFLRLGRKHLFLYPDDGGEMVEQDTICLLDFYVHESLQRQGIGSDLFQLALKEEGLTPTDIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMIFKEHFG 465
            SR +   DE ++ MG  S+ AQ+    +TTA K       IY+  DG        L++G+K+LF Y D  G + E   +C+LDFYVHES+QR G+G +LF+  LK E + P  +AYDRPS KL  FL KH+ L+  + Q N F+IF ++FG
Sbjct:   26 SRRNCYLDEVIDRMGEASAIAQQLKQIITTASKFYGSDQRIYLKADGKNCL--GLLKVGKKNLF-YRDYSGSIKEMQPLCVLDFYVHESVQRMGVGKELFEEMLKSEQIKPEKLAYDRPSQKLIGFLNKHYNLNQYVPQNNNFVIFNQYFG 173          
BLAST of mRNA_L-elsbetiae_contig9130.18160.1 vs. uniprot
Match: A0A7S3G4C9_9EUKA (Alpha-tubulin N-acetyltransferase n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4C9_9EUKA)

HSP 1 Score: 124 bits (311), Expect = 8.230e-31
Identity = 62/155 (40.00%), Postives = 94/155 (60.65%), Query Frame = 1
Query:   31 FDEAVNEMGLLSSKAQEQTTPLTTADKVRERADTIYVMCDGTGATLQAFLRLGRKHLFLYPDDGGEMVEQDTICLLDFYVHESLQRQGIGSDLFQLALKEEGLTPTDIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMIFKEHFGGIAARLAKQG 495
             D+ +++MG+ S KAQ+    +T+   +R    T+Y+       T+  F+++G+K LF+  DD     E   +C+LDFYVHES+QR+GIG  LF   L+ EG  P  +AYDRPSPKL  FL KHF L +   Q N ++++K++F G + +  K G
Sbjct:   36 LDDVLDKMGMASKKAQKLPKAITSGHLLRCSDHTVYICVQNKDRTVLGFIKMGKKTLFIR-DDSARFHEIKPMCVLDFYVHESMQRKGIGKKLFLYMLQCEGKQPHQLAYDRPSPKLLAFLAKHFNLKHYTPQENNYVVYKQYFTGGSQQQEKSG 189          
BLAST of mRNA_L-elsbetiae_contig9130.18160.1 vs. uniprot
Match: V9F716_PHYPR (Alpha-tubulin N-acetyltransferase n=10 Tax=Phytophthora TaxID=4783 RepID=V9F716_PHYPR)

HSP 1 Score: 117 bits (294), Expect = 1.770e-30
Identity = 62/147 (42.18%), Postives = 86/147 (58.50%), Query Frame = 1
Query:   37 EAVNEMGLLSSKAQEQTTPLTTAD-----KVRERADTIYVMCDGTGATLQAFLRLGRKHLFLYPDDGGEMVEQDTICLLDFYVHESLQRQGIGSDLFQLALKEEGLTPTDIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMIFKEHF 462
            +A+N +G  S+ AQ  +  +T+ D        E+  T+ +  +     +  FL+ G KHLF Y    G   E D IC+LDFY+ ++ QR+G+G  LFQ  L+EE +TP  +AYDRPSPKL  FL KH GL     QPNRF+IF  +F
Sbjct:   21 DAINTLGKKSAIAQALSHEITSTDLFASSAAAEQRQTLLLAVNDDDGAVMGFLKTGVKHLF-YLSPSGNYTEMDPICVLDFYIDDTCQRRGVGLQLFQRLLREENITPAQLAYDRPSPKLFAFLKKHAGLTEYFPQPNRFVIFDAYF 166          
BLAST of mRNA_L-elsbetiae_contig9130.18160.1 vs. uniprot
Match: A0A6A4J3L9_APOLU (Alpha-tubulin N-acetyltransferase n=2 Tax=Apolygus lucorum TaxID=248454 RepID=A0A6A4J3L9_APOLU)

HSP 1 Score: 119 bits (299), Expect = 2.930e-30
Identity = 61/150 (40.67%), Postives = 97/150 (64.67%), Query Frame = 1
Query:   22 SKVFDEAVNEMGLLSSKAQEQTTPLTTADKVRERADTIYVMCD---GTGATLQAFLRLGRKHLFLYPDDGGEMVEQDTICLLDFYVHESLQRQGIGSDLFQLALKEEGLTPTDIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMIFKEHF 462
            S V    ++EMG+LS+KAQ+   P+T+ +K+R     +Y++ D    +G  +   L++GRK+L+++ D  GE  E+D++C+LDFY+HES+QR G+G  LF+  L+ E + P  +A DRPS K   FL KH+GL + + Q N F++F   F
Sbjct:   39 SDVVINILDEMGILSAKAQDLQKPITSWEKLRNSDHHVYLLFDRGDDSGGFVMGLLKVGRKNLYVF-DLEGECHERDSLCVLDFYIHESVQRTGLGRKLFEHMLEHENIRPERLAIDRPSHKFLLFLQKHYGLSDVVSQSNNFVVFTAFF 187          
BLAST of mRNA_L-elsbetiae_contig9130.18160.1 vs. uniprot
Match: A0A8J5E736_9DIPT (Alpha-tubulin N-acetyltransferase n=1 Tax=Bradysia odoriphaga TaxID=1564500 RepID=A0A8J5E736_9DIPT)

HSP 1 Score: 119 bits (298), Expect = 6.620e-30
Identity = 61/144 (42.36%), Postives = 88/144 (61.11%), Query Frame = 1
Query:   37 EAVNEMGLLSSKAQEQTTPLTTADKVRERADTIYVMCDGTG--ATLQAFLRLGRKHLFLYPDDGGEMVEQDTICLLDFYVHESLQRQGIGSDLFQLALKEEGLTPTDIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMIFKEHF 462
            E +NEMG  S++AQ  T  +TTA K+R     +Y++ +  G    +   L++G K+L+++ D  GE  +    C+LDFYVHES QR G+G  LFQ  L  EG+ PT +A DRPS KL  FL KH+GL   + Q N F++++  F
Sbjct:   43 EIINEMGESSARAQGLTRAVTTAQKLRNSDQVVYLLRENIGKNGAVTGLLKVGTKNLYVF-DPNGETKQVSAPCVLDFYVHESRQRSGLGKQLFQTMLDSEGINPTKLAIDRPSEKLVGFLKKHYGLERTIPQMNNFVVYEGFF 185          
BLAST of mRNA_L-elsbetiae_contig9130.18160.1 vs. uniprot
Match: A0A3F2RV07_9STRA (Alpha-tubulin N-acetyltransferase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RV07_9STRA)

HSP 1 Score: 115 bits (289), Expect = 9.230e-30
Identity = 67/146 (45.89%), Postives = 89/146 (60.96%), Query Frame = 1
Query:   37 EAVNEMGLLSSKAQEQTTPLTT----ADKVRERADTIYVMCDGTGATLQAFLRLGRKHLFLYPDDGGEMVEQDTICLLDFYVHESLQRQGIGSDLFQLALKEEGLTPTDIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMIFKEHF 462
            EAV+ +G  S++AQ  +  +T+    A  V E+  T+ +  +        FL++G KHLF Y    GE +E D IC+LDFYV E+ QR+G+G  LFQ  L EEG TP  +AYDRPSPKL  FL KH GL     QPNRF++F  +F
Sbjct:   21 EAVDILGKKSARAQALSHEITSTALFASAVSEQRQTLLLAKENDAVV--GFLKMGVKHLF-YVSRTGEYIEIDPICVLDFYVDEAYQRRGVGLQLFQHLLHEEGETPRHLAYDRPSPKLFAFLQKHAGLTEHFPQPNRFVVFDAYF 163          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9130.18160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHZ1_ECTSI4.220e-4980.00N-acetyltransferase domain-containing protein n=1 ... [more]
A0A835Z9U1_9STRA5.060e-3644.72Alpha-tubulin N-acetyltransferase n=1 Tax=Tribonem... [more]
W4GS86_9STRA4.730e-3144.37Alpha-tubulin N-acetyltransferase n=2 Tax=Aphanomy... [more]
A0A485LT96_9STRA5.530e-3146.72Alpha-tubulin N-acetyltransferase n=1 Tax=Aphanomy... [more]
A0C6C2_PARTE6.150e-3143.05Alpha-tubulin N-acetyltransferase n=1 Tax=Parameci... [more]
A0A7S3G4C9_9EUKA8.230e-3140.00Alpha-tubulin N-acetyltransferase n=1 Tax=Palpitom... [more]
V9F716_PHYPR1.770e-3042.18Alpha-tubulin N-acetyltransferase n=10 Tax=Phytoph... [more]
A0A6A4J3L9_APOLU2.930e-3040.67Alpha-tubulin N-acetyltransferase n=2 Tax=Apolygus... [more]
A0A8J5E736_9DIPT6.620e-3042.36Alpha-tubulin N-acetyltransferase n=1 Tax=Bradysia... [more]
A0A3F2RV07_9STRA9.230e-3045.89Alpha-tubulin N-acetyltransferase n=2 Tax=Phytopht... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9130contigL-elsbetiae_contig9130:4192..6028 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score163.3
Seed ortholog evalue9.7e-38
Seed eggNOG ortholog2880.D7FHZ1
KEGG koko:K19573
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0019799,GO:0032886,GO:0033043,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0051128,GO:0051493,GO:0061733,GO:0065007,GO:0070507,GO:0071704,GO:0071929,GO:1901564
EggNOG free text desc.alpha-tubulin acetylation
EggNOG OGsKOG4601@1,KOG4601@2759
EC2.3.1.108
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Ec32 ortholog descriptionAcyl-CoA N-acyltransferase
Ec32 orthologEc-12_006430.1
Exons4
Model size501
Cds size501
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9130.18160.1prot_L-elsbetiae_contig9130.18160.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9130 4192..6028 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816988.022198-CDS-L-elsbetiae_contig9130:4191..43651622816988.022198-CDS-L-elsbetiae_contig9130:4191..4365Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9130 4192..4365 -
1691683963.8850725-CDS-L-elsbetiae_contig9130:4191..43651691683963.8850725-CDS-L-elsbetiae_contig9130:4191..4365Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9130 4192..4365 -
1622816988.0361576-CDS-L-elsbetiae_contig9130:4818..49321622816988.0361576-CDS-L-elsbetiae_contig9130:4818..4932Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9130 4819..4932 -
1691683963.9044833-CDS-L-elsbetiae_contig9130:4818..49321691683963.9044833-CDS-L-elsbetiae_contig9130:4818..4932Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9130 4819..4932 -
1622816988.0489907-CDS-L-elsbetiae_contig9130:5447..55881622816988.0489907-CDS-L-elsbetiae_contig9130:5447..5588Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9130 5448..5588 -
1691683963.915545-CDS-L-elsbetiae_contig9130:5447..55881691683963.915545-CDS-L-elsbetiae_contig9130:5447..5588Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9130 5448..5588 -
1622816988.0620658-CDS-L-elsbetiae_contig9130:5956..60281622816988.0620658-CDS-L-elsbetiae_contig9130:5956..6028Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9130 5957..6028 -
1691683963.9284372-CDS-L-elsbetiae_contig9130:5956..60281691683963.9284372-CDS-L-elsbetiae_contig9130:5956..6028Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9130 5957..6028 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9130.18160.1

>prot_L-elsbetiae_contig9130.18160.1 ID=prot_L-elsbetiae_contig9130.18160.1|Name=mRNA_L-elsbetiae_contig9130.18160.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=167bp
GSLDSRDSKVFDEAVNEMGLLSSKAQEQTTPLTTADKVRERADTIYVMCD
GTGATLQAFLRLGRKHLFLYPDDGGEMVEQDTICLLDFYVHESLQRQGIG
SDLFQLALKEEGLTPTDIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMIF
KEHFGGIAARLAKQGG*
back to top

mRNA from alignment at L-elsbetiae_contig9130:4192..6028-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9130.18160.1 ID=mRNA_L-elsbetiae_contig9130.18160.1|Name=mRNA_L-elsbetiae_contig9130.18160.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1837bp|location=Sequence derived from alignment at L-elsbetiae_contig9130:4192..6028- (Laminarionema elsbetiae ELsaHSoW15)
GGTTCTTTAGATTCACGAGATTCCAAGGTGTTCGATGAGGCGGTCAACGA GATGGGACTCTTGTCAAGCAAGGTGCGCAAAAAAGAGCCAATATTTTGAA TTTGGTACGGTAAAGAGATTCAAAAACCATCCTTCTTGTTTCCGTTTTAT GTCCTGTCTGCAGCAGATCGGTTCGACGCCTTTTTTTAATATTGTAGGCT AAGCTTTCCCAGAGGTGCGAAAACCGCTCACTCATCCATCTCCATCATCG ACATGATACGCCACATCGCATATGTACTTCGAAGTATAATCGAGAGGCAA ACAAAACTACGTAGACTACAGCAGCAATGCAGCACCAGATTTGGCATAAA GAAATGCATTAAACCGTATATTACAATGTACGTGTGATACGACAGCTGAC GATGGTGTGTCGTGTGTGGTTCACCGCTGCTTACCCCCAGGCGCAAGAAC AAACGACTCCGCTGACTACTGCCGACAAGGTTCGGGAGAGGGCTGACACC ATCTACGTCATGTGTGACGGCACCGGGGCAACCTTACAAGCTTTCCTGCG ACTGGGGCGGAAGCATTTATTTCTGTATCCTGTAGGTGCCGGCCACATAC ATAGACGAGATATACTAGACAGTGCTTACGGTTCTCTCGCCTAAACATGA CCCAAATGAACCTCTCTCTGCGGTTGAACGGCGTTTTTTGTGGATCGAGC TTTCCAGTGAGCTTTCCTAATGGATGTGCCAACTGTCGTCGACACGTTTA AATGAACTCTTCGACAAGCTGTGGCGTACGGTCATCATGGTACTGTTTTT CGTACCTGGGACCAGTAAAAACGGGCTCGCAGAGCGCGCCATTGAGTTAC GATAGATTTCCAAGGGCTACACTACCGCAGCATGTTACATGCAGCGCGCG TTTCCGGAAATACTCGCAGCAACTCCCTCTGTCCCCTATGGGCCAGAAAT TGGTCCATTACTTCACATCGAAAATTAGAAAGAAGTAGTCTATAGGCCTC AGAGGCAATGCATTTATCAGGTAGGGTCCACAACGACCGTCTAGCGGCGG ATCATCTCCGCTGACACGTGTTACACATTAACACGTTACCCTTCAGGACG ACGGCGGAGAAATGGTGGAGCAAGACACGATATGCCTGCTGGATTTTTAT GTTCACGAAAGCTTGCAACGACAGGGCATTGGCTCCGACCTCTTCCAACT GGCCCTCAAGGTAAAGCTTCGTGAAGGCCAGAGCATACTCACTACTGTTG TGTAGCACTGGTGTAGACAAGGAAGGGGACTTGGACGGTAAGACATCGAT CTTACAGCACACGTTGGGGCTACTTTCCTGAACGAGATCCGCGGTTCGGA GCGGTACCGACCGATTCATCAACGTCCAGCCTTCCCGGGCTCCAGAAGGC CTTACCCGTACGATCTCCCGCTTGTCGTTTTATTTCATCGATAAGCGCCC ATTTCCAAGTCACTTTGGTAACTTGTGGTACAGAGTAACGTGTAGAACTT TGTAATAAAAGTGCGCATTTTCGAAACTGAATATCTCCAGCCTTCTCACC AACCGGGAACGCACAGCAGAACTCTTCGTCACATCTCCAAAGAAGTTTCA CAAGATTTAAACACGATCGTGTCCACCCGCTTCCTACACCACCCACGCGA CTGCACTTGACAGGAGGAAGGACTAACACCGACGGACATCGCGTACGACA GACCATCCCCGAAGCTCAAACCCTTCCTCGGGAAGCATTTTGGGCTACAC AATTGTTTGGACCAGCCGAACCGTTTCATGATTTTTAAGGAACACTTCGG AGGGATCGCCGCGCGTCTAGCAAAGCAGGGCGGCTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig9130:4192..6028-

>mRNA_L-elsbetiae_contig9130.18160.1 ID=mRNA_L-elsbetiae_contig9130.18160.1|Name=mRNA_L-elsbetiae_contig9130.18160.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1002bp|location=Sequence derived from alignment at L-elsbetiae_contig9130:4192..6028- (Laminarionema elsbetiae ELsaHSoW15)
GGTTCTTTAGATTCACGAGATTCCAAGGTGTTCGATGAGGCGGTCAACGA
GATGGGACTCTTGTCAAGCAAGGGTTCTTTAGATTCACGAGATTCCAAGG
TGTTCGATGAGGCGGTCAACGAGATGGGACTCTTGTCAAGCAAGGCGCAA
GAACAAACGACTCCGCTGACTACTGCCGACAAGGTTCGGGAGAGGGCTGA
CACCATCTACGTCATGTGTGACGGCACCGGGGCAACCTTACAAGCTTTCC
TGCGACTGGGGCGGAAGCATTTATTTCTGTATCCTGCGCAAGAACAAACG
ACTCCGCTGACTACTGCCGACAAGGTTCGGGAGAGGGCTGACACCATCTA
CGTCATGTGTGACGGCACCGGGGCAACCTTACAAGCTTTCCTGCGACTGG
GGCGGAAGCATTTATTTCTGTATCCTGACGACGGCGGAGAAATGGTGGAG
CAAGACACGATATGCCTGCTGGATTTTTATGTTCACGAAAGCTTGCAACG
ACAGGGCATTGGCTCCGACCTCTTCCAACTGGCCCTCAAGGACGACGGCG
GAGAAATGGTGGAGCAAGACACGATATGCCTGCTGGATTTTTATGTTCAC
GAAAGCTTGCAACGACAGGGCATTGGCTCCGACCTCTTCCAACTGGCCCT
CAAGGAGGAAGGACTAACACCGACGGACATCGCGTACGACAGACCATCCC
CGAAGCTCAAACCCTTCCTCGGGAAGCATTTTGGGCTACACAATTGTTTG
GACCAGCCGAACCGTTTCATGATTTTTAAGGAACACTTCGGAGGGATCGC
CGCGCGTCTAGCAAAGCAGGGCGGCTGAGAGGAAGGACTAACACCGACGG
ACATCGCGTACGACAGACCATCCCCGAAGCTCAAACCCTTCCTCGGGAAG
CATTTTGGGCTACACAATTGTTTGGACCAGCCGAACCGTTTCATGATTTT
TAAGGAACACTTCGGAGGGATCGCCGCGCGTCTAGCAAAGCAGGGCGGCT
GA
back to top