mRNA_L-elsbetiae_contig9087.18116.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9087.18116.1
Unique NamemRNA_L-elsbetiae_contig9087.18116.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig9087.18116.1 vs. uniprot
Match: D7FLA4_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLA4_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 1.070e-70
Identity = 121/170 (71.18%), Postives = 136/170 (80.00%), Query Frame = 3 
Query:    3 SYTMVGDPHYMAPEQISGQGYEYGVDYWSLGILIFAMLHVETPFANHTSETQVYTSIASFKPEDLPFQVAVSPPAQDIVRAFLQPKQAKRLGSEGAHALMAHPFFQSMDWDQLERGVLLAPTSGEEIAGLIGDRSDPQFQIEFLHSGEDSNGSKHA-AGDETVDALFRAF 509
            +YTMVGDPHYMAPEQISGQGY YGVDYWS+GIL+FAMLHVETPFA HTSETQVYTSIASFKPE LPF   VS PAQ++VR+FLQPKQ +RLGS G  AL  HPFF+ +DWDQLERG L  P  G++IA  IGDRSDPQF+ EFL+  +DS   K    GD   DALF+AF
Sbjct:  843 AYTMVGDPHYMAPEQISGQGYGYGVDYWSIGILLFAMLHVETPFAQHTSETQVYTSIASFKPESLPFDDTVSQPAQEVVRSFLQPKQDERLGSGGGAALTEHPFFKGIDWDQLERGTLPPPLLGKDIAEQIGDRSDPQFESEFLNGSQDSEDRKDTKGGDAAFDALFKAF 1012
[Close]
BLAST of mRNA_L-elsbetiae_contig9087.18116.1 vs. uniprot
Match: A0A6H5JL34_9PHAE (cGMP-dependent protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL34_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 5.570e-22
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 3 
Query:    3 SYTMVGDPHYMAPEQISGQGYEYGVDYWSLGILIFAMLHVETPFANHTSETQV 161
            +YTMVGDPHYMAPEQISGQGY YGVDYWSLGIL+FAMLHVETPFA HTSETQV
Sbjct:  808 AYTMVGDPHYMAPEQISGQGYGYGVDYWSLGILLFAMLHVETPFAQHTSETQV 860
[Close]
BLAST of mRNA_L-elsbetiae_contig9087.18116.1 vs. uniprot
Match: W4H4D6_9STRA (cGMP-dependent protein kinase n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4D6_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.270e-19
Identity = 56/135 (41.48%), Postives = 74/135 (54.81%), Query Frame = 3 
Query:    3 SYTMVGDPHYMAPEQISGQGYEYGVDYWSLGILIFAMLHVETPFAN-HTSETQVYTSIASFKPEDLPFQVAVSPPAQDIVRAFLQPKQAKRLGSEGAHALMA-------HPFFQSMDWDQLE--RGVLLAPTSGE 377
            ++T+ G+P Y+APEQI+GQG     DYWSLGIL++ ML   TPF + H  E  ++  I SF P+ L F    SP  Q +++  L PK A RLG+       A       H FFQ + WDQL      LLA  S +
Sbjct:  979 TFTICGNPEYLAPEQINGQGQTLATDYWSLGILLYEMLVGTTPFQHLHHDELAMFNGIVSFSPDSLEFPPTSSPALQALIKGLLDPKPASRLGAADCFKKSADECVVPQHAFFQGLQWDQLNDTNAPLLAEASAK 1113
[Close]
BLAST of mRNA_L-elsbetiae_contig9087.18116.1 vs. uniprot
Match: A0A7S3UR38_HETAK (cGMP-dependent protein kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UR38_HETAK)

HSP 1 Score: 98.2 bits (243), Expect = 1.140e-18
Identity = 55/171 (32.16%), Postives = 91/171 (53.22%), Query Frame = 3 
Query:    3 SYTMVGDPHYMAPEQISGQGYEYGVDYWSLGILIFAMLHVETPFAN-HTSETQVYTSIASFKPEDLP-FQVAVSPPAQDIVRAFLQPKQAKRLGSEGAHALMAHPFFQSMDWDQLERGVLLAPTSGEEIAGLIGDRSDPQFQIEFLHSGEDSNGSKHAAGDETVDALFRAF 509
            +YT+ GD  Y APEQ+SG+GY+Y VDYW  G+L + +LH+  PF +  T E Q+Y +I+ ++  DLP     +S  AQD+++  +   + +RLG+    ++  HP+F+ ++W  L++   +  + G E       R + + + EF    E             V  LF AF
Sbjct:  387 AYTLAGDAQYFAPEQVSGRGYDYAVDYWGAGVLAYELLHLANPFGDSQTDEKQLYINISQYR-GDLPDMNSELSQQAQDLLKGLICKDKTQRLGTTDFSSIENHPWFEGLNWKTLDQEESVPESPGLEAPKTARLRRE-EVEAEFFAGAEPP---------PAVQRLFEAF 546
[Close]
BLAST of mRNA_L-elsbetiae_contig9087.18116.1 vs. uniprot
Match: A0A7R9SVY1_9CHLO (cGMP-dependent protein kinase n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9SVY1_9CHLO)

HSP 1 Score: 97.1 bits (240), Expect = 3.990e-18
Identity = 52/123 (42.28%), Postives = 77/123 (62.60%), Query Frame = 3 
Query:    3 SYTMVGDPHYMAPEQISGQGYEYGVDYWSLGILIFAMLHVETPFANHTSETQVYTSIASFKPEDLPFQVAVSPPAQDIVRAFLQPKQAKRLGSE--GAHALMAHPFFQSMDWDQLERGVLLAP 365
            +YT+ G P Y+APE I G G++ G D WSLGILIF MLH  TPF+    ++Q++T I S    ++ ++  +S  AQ I+RA L      R+G+   G   +++HP+F+ MDW +LE+  L AP
Sbjct:  734 AYTLCGTPDYLAPEIIKGTGHDKGCDLWSLGILIFEMLHGYTPFSAD-DDSQIFTGILS---GEIEYEDHISDCAQSIIRALLNRNPKTRIGNGKFGIKPILSHPWFKGMDWTKLEKEQLPAP 852
[Close]
BLAST of mRNA_L-elsbetiae_contig9087.18116.1 vs. uniprot
Match: A0A836CMM9_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMM9_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 8.210e-18
Identity = 56/156 (35.90%), Postives = 77/156 (49.36%), Query Frame = 3 
Query:    3 SYTMVGDPHYMAPEQISGQGYEYGVDYWSLGILIFAMLHVETPF------------ANHTSETQVYTSIASFKPEDLPFQVAVSPPAQDIVRAFLQPKQAKRLGSEGAHALMAHPFFQSMDWDQLERGVLLAPTSGEEIAGLIGDRSDPQFQIEFL 434
            +YTM+GDP Y+APE ISGQGY + VD+W+LGIL + ML   TPF            A  ++ET++Y +I+ F P  L      +P A   +R+ L P    RLG  G     A P                 P     +   + DRSDP+++ EFL
Sbjct: 1013 AYTMIGDPQYLAPEVISGQGYGFSVDHWALGILTYEMLEAATPFGKGSISAGNASTAELSNETEIYINISCFDPAKLGLSSHATPAAAAFMRSLLAPAPENRLGYSGE----ARP-----------------PAEITRLLAALDDRSDPEYEREFL 1147
[Close]
BLAST of mRNA_L-elsbetiae_contig9087.18116.1 vs. uniprot
Match: A0A024UNS7_9STRA (cGMP-dependent protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNS7_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.050e-17
Identity = 48/122 (39.34%), Postives = 68/122 (55.74%), Query Frame = 3 
Query:    3 SYTMVGDPHYMAPEQISGQGYEYGVDYWSLGILIFAMLHVETPFANHTS-ETQVYTSIASFKPEDLPFQVAVSPPAQDIVRAFLQPKQAKRLGSEGAH-------ALMAHPFFQSMDWDQLE 344
            ++T+ G+P Y+APEQI+GQG     DYWSLGIL++ ML   TPF  H   E  ++  I +F P+ L F    SP  Q +++  L P  A R G++          A+  H FF  + WDQL+
Sbjct:  950 TFTICGNPEYLAPEQINGQGQSLVTDYWSLGILLYEMLVGTTPFEKHNQDELAMFNGIVAFSPDSLEFPPTSSPALQSLIKMLLDPTPATRFGADDCLLKSFSDCAVPKHSFFNGLQWDQLQ 1071
[Close]
BLAST of mRNA_L-elsbetiae_contig9087.18116.1 vs. uniprot
Match: A0A6G0X1G2_9STRA (cGMP-dependent protein kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1G2_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.410e-17
Identity = 51/136 (37.50%), Postives = 74/136 (54.41%), Query Frame = 3 
Query:    3 SYTMVGDPHYMAPEQISGQGYEYGVDYWSLGILIFAMLHVETPFANHTS-ETQVYTSIASFKPEDLPFQVAVSPPAQDIVRAFLQPKQAKRLGSEGAHALMA-------HPFFQSMDWDQLERGVLLAPTSGEEIA 386
            ++T+ G+P Y+APE I+GQG     DYWSLGIL++ ML  ETPFA +   E  ++ SI +F P+ L F    SP  + +++  LQ K A RLG+       +       HPFF  + W  + R    +P  G+  A
Sbjct:  960 TFTICGNPEYLAPEHINGQGQSLATDYWSLGILLYEMLVGETPFAKYNKDELAMFNSIVTFTPDTLEFPSTASPALKSLIQGLLQSKPASRLGAADCFKKTSDECIVPKHPFFNGVVWQDVNRAK--SPLGGQASA 1093
[Close]
BLAST of mRNA_L-elsbetiae_contig9087.18116.1 vs. uniprot
Match: A9UYF7_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UYF7_MONBE)

HSP 1 Score: 90.1 bits (222), Expect = 7.460e-17
Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 3 
Query:    9 TMVGDPHYMAPEQISGQGYEYGVDYWSLGILIFAMLHVETPFANHTSETQVYTSIASFKPEDLPFQVAVSPPAQDIVRAFLQPKQAKRLGS--EGAHALMAHPFFQSMDWDQL 341
            T  G P Y+APE I+GQ Y++ VDYW+LG+L++ ML  E PF     + +++ +I      D+ +   +S  A D+V+AFL      RLGS   GA  +M H FF S+DWDQL
Sbjct:  113 TFCGTPDYIAPEIINGQSYDFSVDYWALGVLLYEMLVGEAPFGGDDDD-ELFQAILD---NDVHYPRHLSSSASDLVKAFLTSDPDARLGSGSSGAEDIMGHAFFSSIDWDQL 221
[Close]
BLAST of mRNA_L-elsbetiae_contig9087.18116.1 vs. uniprot
Match: UPI0001EFC000 (cAMP-dependent protein kinase catalytic subunit n=1 Tax=Trichinella spiralis TaxID=6334 RepID=UPI0001EFC000)

HSP 1 Score: 86.7 bits (213), Expect = 9.760e-17
Identity = 50/124 (40.32%), Postives = 76/124 (61.29%), Query Frame = 3 
Query:    3 SYTMVGDPHYMAPEQISGQGYEYGVDYWSLGILIFAMLHVETPFANHTSETQVYTSIASFKPEDLPFQVAVSPPAQDIVRAFLQPKQAKRLGS--EGAHALMAHPFFQSMDWDQLERGVLLAPT 368
            ++TM G P Y+APE ++G+GY   VD+WSLGILI+ ML  +TPF   T+  ++Y +I      D  F       A+DI+R FL+ +++KRLG+  EG  A+  H +F S++WD +    L  P+
Sbjct:    3 TWTMCGTPEYLAPEIVTGKGYNQAVDWWSLGILIYEMLSGKTPFEAPTA-IELYQNIVY---GDFKFTRQFERGARDIIRKFLRVEKSKRLGNTKEGILAVKNHRWFVSVNWDLVAHRRLQKPS 122
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9087.18116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLA4_ECTSI1.070e-7071.18cGMP-dependent protein kinase n=1 Tax=Ectocarpus s... [more]
A0A6H5JL34_9PHAE5.570e-2292.45cGMP-dependent protein kinase n=1 Tax=Ectocarpus s... [more]
W4H4D6_9STRA1.270e-1941.48cGMP-dependent protein kinase n=6 Tax=Aphanomyces ... [more]
A0A7S3UR38_HETAK1.140e-1832.16cGMP-dependent protein kinase n=1 Tax=Heterosigma ... [more]
A0A7R9SVY1_9CHLO3.990e-1842.28cGMP-dependent protein kinase n=1 Tax=Polyblephari... [more]
A0A836CMM9_9STRA8.210e-1835.90cGMP-dependent protein kinase n=1 Tax=Tribonema mi... [more]
A0A024UNS7_9STRA1.050e-1739.34cGMP-dependent protein kinase n=1 Tax=Aphanomyces ... [more]
A0A6G0X1G2_9STRA1.410e-1737.50cGMP-dependent protein kinase n=1 Tax=Aphanomyces ... [more]
A9UYF7_MONBE7.460e-1742.48Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
UPI0001EFC0009.760e-1740.32cAMP-dependent protein kinase catalytic subunit n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9087contigL-elsbetiae_contig9087:2883..5478 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score242.7
Seed ortholog evalue1.3e-61
Seed eggNOG ortholog2880.D7FLA4
KEGG koko:K07376,ko:K14803,ko:K19477
KEGG Pathwayko04022,ko04270,ko04540,ko04611,ko04713,ko04714,ko04730,ko04740,ko04923,ko04924,ko04970,map04022,map04270,map04540,map04611,map04713,map04714,map04730,map04740,map04923,map04924,map04970
KEGG ModuleM00694
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
EggNOG free text desc.cGMP-dependent protein kinase activity
EggNOG OGsCOG0631@1,COG0664@1,KOG0614@2759,KOG0698@2759
EC2.7.11.12,3.1.3.16
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko01009,ko03009
Exons4
Model size1141
Cds size501
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9087.18116.1prot_L-elsbetiae_contig9087.18116.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9087 3512..5467 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816983.7405672-UTR-L-elsbetiae_contig9087:2882..35111622816983.7405672-UTR-L-elsbetiae_contig9087:2882..3511Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9087 2883..3511 -
1691683960.5389369-UTR-L-elsbetiae_contig9087:2882..35111691683960.5389369-UTR-L-elsbetiae_contig9087:2882..3511Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9087 2883..3511 -
1622816983.7964444-UTR-L-elsbetiae_contig9087:5467..54781622816983.7964444-UTR-L-elsbetiae_contig9087:5467..5478Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9087 5468..5478 -
1691683960.588109-UTR-L-elsbetiae_contig9087:5467..54781691683960.588109-UTR-L-elsbetiae_contig9087:5467..5478Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9087 5468..5478 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816983.752137-CDS-L-elsbetiae_contig9087:3511..36641622816983.752137-CDS-L-elsbetiae_contig9087:3511..3664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9087 3512..3664 -
1691683960.5505466-CDS-L-elsbetiae_contig9087:3511..36641691683960.5505466-CDS-L-elsbetiae_contig9087:3511..3664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9087 3512..3664 -
1622816983.7640665-CDS-L-elsbetiae_contig9087:4115..42201622816983.7640665-CDS-L-elsbetiae_contig9087:4115..4220Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9087 4116..4220 -
1691683960.5596623-CDS-L-elsbetiae_contig9087:4115..42201691683960.5596623-CDS-L-elsbetiae_contig9087:4115..4220Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9087 4116..4220 -
1622816983.7746816-CDS-L-elsbetiae_contig9087:4889..49851622816983.7746816-CDS-L-elsbetiae_contig9087:4889..4985Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9087 4890..4985 -
1691683960.5686975-CDS-L-elsbetiae_contig9087:4889..49851691683960.5686975-CDS-L-elsbetiae_contig9087:4889..4985Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9087 4890..4985 -
1622816983.7852297-CDS-L-elsbetiae_contig9087:5320..54671622816983.7852297-CDS-L-elsbetiae_contig9087:5320..5467Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9087 5321..5467 -
1691683960.578695-CDS-L-elsbetiae_contig9087:5320..54671691683960.578695-CDS-L-elsbetiae_contig9087:5320..5467Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9087 5321..5467 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9087.18116.1

>prot_L-elsbetiae_contig9087.18116.1 ID=prot_L-elsbetiae_contig9087.18116.1|Name=mRNA_L-elsbetiae_contig9087.18116.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=167bp
MVGDPHYMAPEQISGQGYEYGVDYWSLGILIFAMLHVETPFANHTSETQV
YTSIASFKPEDLPFQVAVSPPAQDIVRAFLQPKQAKRLGSEGAHALMAHP
FFQSMDWDQLERGVLLAPTSGEEIAGLIGDRSDPQFQIEFLHSGEDSNGS
KHAAGDETVDALFRAF*
back to top

mRNA from alignment at L-elsbetiae_contig9087:2883..5478-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9087.18116.1 ID=mRNA_L-elsbetiae_contig9087.18116.1|Name=mRNA_L-elsbetiae_contig9087.18116.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2596bp|location=Sequence derived from alignment at L-elsbetiae_contig9087:2883..5478- (Laminarionema elsbetiae ELsaHSoW15)
AGTCATACACTATGGTGGGCGACCCGCACTATATGGCGCCGGAGCAAATA
TCTGGGCAAGGGTACGAGTACGGCGTAGACTATTGGTCGCTCGGGATCCT
TATCTTTGCGATGCTGCATGTCGAGACGCCGTTCGCCAACCACACCTCGG
AGACCCAGGTATTATACATACATAACCTACATATAGATATCCACATGTTT
CCGAAGAGAATTACGCATGTATCGTCTATCTAATCCACTGTATTGCTCAC
GAATGCAAGGAAAATACAGTTGTAGATTTCATATGCTACATGCTTGTCAA
CTATGTCGCGTGCAATCGCACCAACGAGCCAAGCCCTCCGCCCCGAAGGT
GTGCTCGCCATGCACACGCGTGGGACTCATGAAGCTCACACCAAACGAAC
CGGTCAGTAGTGACCTGGCCACTATGTAAATGTCGAGACAATGAATACTT
AATGAATGGATGTTCGAACCTTTCTTTGCTTGGCATGAATCAGGTGTACA
CAAGTATTGCTTCCTTCAAGCCGGAGGATCTACCCTTCCAGGTGGCGGTG
TCACCCCCGGCTCAGGACATAGTTCGAGCCTTTCTTCAGGTATACCATGC
AACATCACTACACACGGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTCTGGTTGTTGTTGTCTTCACTTTAAAAACCGTTTCGATCTCCCC
ACCCAGCACCTCCCTAGAAGCGCGAACTATTCTAACACTTGATTCGATCA
ATTCCCGTGGTCATCTAGGTAAACTCAGATATACCTAACAAAGGTATACG
AAAATAACATCGACCCGAAGGGTGCCAAAGAGGAAATTGTAAAATATATA
AATGCATTCGTGAGATGTCCGTATTGCTTTAACGGGGTCTTCAGTGAACG
ATGGTTGTCAGACGTTTCAAACAGAGCGAGCACATGATTTTCCAATACCT
GAACGCTCGTGTGCTGGGAGAAGGTGAGACGCTCATCCATGCGTTGGTGG
TGCTGTCAGTAACATGTTACTATGCACGTACAGCAGTGGACCTCAAATAA
TCTACTTAGACTATCTTCTACTCCTATATAGCTAGATAATTTGGCCTGCT
GAGCCGAAAAGGTAGTCGGTTTTTCTCTTCAGGCCCCCGCATCGAGCCCC
GGCGTCGGCCAAATAGTCAACAATCGTTCCCTGCGTGCACGGCTGAGGCC
GGTATTCAACCGTTGTTGTTCCTCAATTTTTGCAAATTATACCTCCCCCG
AAATCCAGCCGAAGCAAGCCAAGCGCCTGGGCAGCGAGGGCGCCCACGCT
TTGATGGCACATCCTTTCTTCCAAAGCATGGACTGGGATCAGCTTGAGCG
AGGAGTCCTTCTGGTGAGTGAGTGCCATGGGGGCGGGCGGGCGGGTCGCT
CTTTTTCGGAGCTGCCCATGTGGAGTGAAGTTTGTATGGATCCAGATATA
AGCGAAATGTTCACGAATATCTATGCCATGAAACAAACACTGAAGAAACA
TGAAACGAACACTTAGTAATATGTTTGCTCTTCCCCTAACTCCGTTCAAA
CAAATTCGCTGAGGAGTTAAAGTTTTTTCTGGGCTCGGGCAGCGCGGCCA
GTCTTTCTCGACTACCCCTTTGACAGAAAGGGCGTGCATTTGTTGGTAAT
AAAGCATGGTCCGCGCAGTTACAGGTGATTCCCCGGAGACCGTCTTTACA
ATTTCAGGCAGAAGAACTGTACAATAATTGTACTGGTAGTATAATCATAT
ACCTGTCGAATCGTGGTAAATGCTAACGACATGCATTCCCCGCGCTTGAA
ACGAACTTTTTCAGGCACCGACATCGGGCGAAGAAATTGCTGGACTGATC
GGTGACAGATCGGATCCTCAGTTCCAAATCGAGTTCCTTCACAGCGGGGA
AGATAGTAATGGGAGCAAACATGCTGCTGGGGACGAGACCGTTGACGCTC
TCTTCAGGGCCTTTTGAAAAAAAAGGGGTGCACATTACACGTTGGAGTAG
GACCTACATACCTATATACACAATATCACACTCAAGATGACGCCACAGTA
CGTCGTCGGGACAAAGAGAACAGAGCAGTTTTTCGCCCACCAAGTTCCAT
CTTTGTTCTGTTACTCCATGGCGTTTGAATCTGGTCTGCGGAAGGGTAGT
TTTGAAGCCATTCGCGCTACACTAGTAGTAGCTAGTTTTCTAGCACGAGC
ACCCAAAATAATACACGTGGGTTAGGGTTACGGTTACGGTTAGGGTTAGC
TTCTCTCATGAACACCATGAGAATACAAAAAAAAATAGTATTCATTTCGC
GAACAGCAAGATGCACGTTCGCACGTTTCCCTCACCCATTCCTTTCCACG
GCCTGCGCTACGGTGCAACTTCATTCCTTGCACCCCAGCCTGCCTTAGCG
TTGAGAGCCTTCTGGCCCCACCGCCCACTGGGGGCGAGGGGGTCGTTCTA
CAACCAACCCTAGTATCCTTACGAACTAAGGAATAACTAAGGTTTAGAGC
TAAGGCGTAGAACTAAGGTTTTCTCTCTGTGCACTAAGATCCCAGACCTA
AATAGAAAACGTGAAGCCGTAGATCTTGAAGCCGGAGATAATGAAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig9087:2883..5478-

>mRNA_L-elsbetiae_contig9087.18116.1 ID=mRNA_L-elsbetiae_contig9087.18116.1|Name=mRNA_L-elsbetiae_contig9087.18116.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1002bp|location=Sequence derived from alignment at L-elsbetiae_contig9087:2883..5478- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGGCGACCCGCACTATATGGCGCCGGAGCAAATATCTGGGCAAGG
GTACGAGTACGGCGTAGACTATTGGTCGCTCGGGATCCTTATCTTTGCGA
TGCTGCATGTCGAGACGCCGTTCGCCAACCACACCTCGGAGACCCAGATG
GTGGGCGACCCGCACTATATGGCGCCGGAGCAAATATCTGGGCAAGGGTA
CGAGTACGGCGTAGACTATTGGTCGCTCGGGATCCTTATCTTTGCGATGC
TGCATGTCGAGACGCCGTTCGCCAACCACACCTCGGAGACCCAGGTGTAC
ACAAGTATTGCTTCCTTCAAGCCGGAGGATCTACCCTTCCAGGTGGCGGT
GTCACCCCCGGCTCAGGACATAGTTCGAGCCTTTCTTCAGGTGTACACAA
GTATTGCTTCCTTCAAGCCGGAGGATCTACCCTTCCAGGTGGCGGTGTCA
CCCCCGGCTCAGGACATAGTTCGAGCCTTTCTTCAGCCGAAGCAAGCCAA
GCGCCTGGGCAGCGAGGGCGCCCACGCTTTGATGGCACATCCTTTCTTCC
AAAGCATGGACTGGGATCAGCTTGAGCGAGGAGTCCTTCTGCCGAAGCAA
GCCAAGCGCCTGGGCAGCGAGGGCGCCCACGCTTTGATGGCACATCCTTT
CTTCCAAAGCATGGACTGGGATCAGCTTGAGCGAGGAGTCCTTCTGGCAC
CGACATCGGGCGAAGAAATTGCTGGACTGATCGGTGACAGATCGGATCCT
CAGTTCCAAATCGAGTTCCTTCACAGCGGGGAAGATAGTAATGGGAGCAA
ACATGCTGCTGGGGACGAGACCGTTGACGCTCTCTTCAGGGCCTTTTGAG
CACCGACATCGGGCGAAGAAATTGCTGGACTGATCGGTGACAGATCGGAT
CCTCAGTTCCAAATCGAGTTCCTTCACAGCGGGGAAGATAGTAATGGGAG
CAAACATGCTGCTGGGGACGAGACCGTTGACGCTCTCTTCAGGGCCTTTT
GA
back to top