mRNA_L-elsbetiae_contig900.18021.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig900.18021.1 vs. uniprot
Match: Q6XLX1_9PHYC (FirrV-1-C7 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLX1_9PHYC) HSP 1 Score: 228 bits (580), Expect = 2.070e-72 Identity = 117/214 (54.67%), Postives = 147/214 (68.69%), Query Frame = 1 Query: 1 MMVEYSTVTGLPLKPCKSGYVRNPLTNRCRKKXXXXXXXNARG--TRPSPGR----KTWKDTIKAWKAGKHFPDITGSVFWETSAIKNGGNVLYKEQTESASGDLPMSLRGDSSIFKAHLKNKTSAVMFYSPSRTL-LVAPPD-KKKNYSHLATFYKNASQREINSLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDVLE 618 M+ E S TG PLKPCK+GYVRNP+TNRC KK A+ +PS R KTWKD +K+WKAGK P I GSVFWETSAIKNGG+V YKE+T+SA +LP+ +R DSS F +L K V F + T LV PPD + +SHL FYKNAS+ +I++LWK VA+ IEK +K H +YVSTHG G+ WLHVRI +P+Y+VT+VL+ Sbjct: 1 MVPEISNKTGRPLKPCKAGYVRNPVTNRCCKKTPANHRLTAKRPPNKPSVSRGSKKKTWKDVLKSWKAGKDLPKIKGSVFWETSAIKNGGDVEYKEKTKSARSELPIHMRSDSSSFSEYLDGKLGPVSFNNSGGTCTLVCPPDGSDQEFSHLGQFYKNASKNQISALWKKVAMEIEKMMKKHKTVYVSTHGKGIPWLHVRICKSPKYFVTNVLD 214
BLAST of mRNA_L-elsbetiae_contig900.18021.1 vs. uniprot
Match: Q8QN82_ESV1K (EsV-1-207 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN82_ESV1K) HSP 1 Score: 216 bits (550), Expect = 5.490e-68 Identity = 106/196 (54.08%), Postives = 134/196 (68.37%), Query Frame = 1 Query: 25 TGLPLKPCKSGYVRNPLTNRCRKKXXXXXXXNARGTRPSPGRKTWKDTIKAWKAGKHFPDITGSVFWETSAIKNGGNVLYKEQTESASGDLPMSLRGDSSIFKAHLKNKTSAVMFYSPSRTLLVAPPDKKKNYSHLATFYKNASQREINSLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDV 612 T PLKPCK G+VRNP TNRCRK + S +TW D IKAWKAGK PDI GSVFWETS GG+ ++++T+SA+ LPM+L D ++F H+KNK + V F S TLL+ PPD KN+SHLATFYK+ S E +LWK VAV ++++LK + +YVSTHGTGV+WLHVR++S P YYVT V Sbjct: 14 TSRPLKPCKQGWVRNPETNRCRK-----CQPGSSSVLLSQTAQTWNDVIKAWKAGKDLPDIKGSVFWETSVATAGGDSPFRQKTKSAARALPMTLPADPAVFSHHMKNKKTPVAFNSFGGTLLIIPPDTGKNFSHLATFYKHGSDAEKRALWKKVAVELQRKLKRGETVYVSTHGTGVSWLHVRLASRPMYYVTSV 204
BLAST of mRNA_L-elsbetiae_contig900.18021.1 vs. uniprot
Match: D7FZG8_ECTSI (EsV-1-207 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG8_ECTSI) HSP 1 Score: 169 bits (429), Expect = 1.910e-49 Identity = 82/150 (54.67%), Postives = 109/150 (72.67%), Query Frame = 1 Query: 172 KAW---KAGKHFPDITGSVFWETSAIKNGGNVLYKEQTESASGDLPMSLRGDSSIFKAHLKNKTSAVMFYSPSRTLLVAPPDKKKNYSHLATFYKNASQREINSLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDV 612 +AW +AGK PDI GSVFWETS GG+ ++++T+SA+ LPM+L D ++F H+KNK + V F S TLLV PPD KN+SHLATFYK++S E +LWK VAV ++++LK + +YVSTHGTGV+WLHVR++S P YYVT V Sbjct: 72 EAWVLREAGKDLPDIKGSVFWETSVATAGGDSPFRQKTKSAARALPMTLPADPALFAHHMKNKKTPVAFNSFGGTLLVIPPDTGKNFSHLATFYKHSSDAEKRALWKKVAVELQRKLKRGETVYVSTHGTGVSWLHVRLASRPMYYVTSV 221
BLAST of mRNA_L-elsbetiae_contig900.18021.1 vs. uniprot
Match: B5LWM8_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM8_9PHYC) HSP 1 Score: 163 bits (413), Expect = 3.070e-46 Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 1 Query: 130 TRPSPGRKTWKDTIKAWKAGKHFPDITGSVFWETSAIKNGGNVLYKEQTESASGDLPMSLRGDSSIFKAHLKNKTSAVMFYSPSRT-LLVAPPDKKKNYSHLATFYKNASQREINSLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDV 612 +RP R TW D + W G P + SVFWETS I G+ +K++ +AS DLPMS+ GDSS F +L +TS V FY+ +RT +LVAPPD KN++HL FYKN++ +E LW+ VA I K+++ + +YVSTHGT + WLH+R+ + P+YYV+D+ Sbjct: 124 SRPRKTRATWNDVVAKWYGGIDLPQVKSSVFWETSRISADGSSTFKQKQVAASRDLPMSMVGDSSAFTKYLYGQTSPVSFYNLNRTAVLVAPPDTGKNFAHLGLFYKNSTTQERKQLWRKVAEEIMKKIRKGESVYVSTHGTNIPWLHIRLDTVPKYYVSDL 285
BLAST of mRNA_L-elsbetiae_contig900.18021.1 vs. uniprot
Match: D7G321_ECTSI (EsV-1-207 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G321_ECTSI) HSP 1 Score: 136 bits (343), Expect = 2.260e-37 Identity = 69/148 (46.62%), Postives = 93/148 (62.84%), Query Frame = 1 Query: 178 WKAGKHFPDITGSVFWETSAIKNGGNVLYKEQTESASGDLPMSLRGDSSIFKAHLKNKTSA-VMFYSPSR--TLLVAPPDKKKNYSHLATFYKNASQREINSLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDV 612 WK G+ P+I SVFWE S NGG+ L+ + +SA+ LP D + F HL+ V F S S T LV PPD KN+SH+ FYK+++ E +LW+ VA+ +EK+L + +YVSTHG GV+W+HVR+S TPRY VTDV Sbjct: 2 WKEGRMLPEIKSSVFWECSPAYNGGDSLFHSKIKSAARVLPAKTPADRNPFAMHLRRARGVPVSFRSSSTPSTTLVIPPDSGKNFSHIGNFYKHSTLGERKALWRKVAIELEKKLARGETVYVSTHGGGVHWVHVRLSLTPRYNVTDV 149
BLAST of mRNA_L-elsbetiae_contig900.18021.1 vs. uniprot
Match: A0A6C0E4B2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0E4B2_9ZZZZ) HSP 1 Score: 87.4 bits (215), Expect = 3.820e-18 Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 157 WKDTIKAWKAG---KHFPDITGSVFWETSAIKNGGNVLYKEQTESASGDLPMSLRGDSSIFKAHLKNKTSAVMFYSPSR---TLLVAP-PDKKKNYSHLATFYKNASQREINSLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDVLE 618 W + + W+ G K+ ++ G W TS +KN G V Y QT + L R + F+ + KN + + P+ T+LV P P + KNY+ L F NAS+ + WK VA +K + +++S HG GV++ HVRIS++P+YY + L+ Sbjct: 3 WSEILANWENGIVLKYPKNVKGKFQWNTSVLKNDGKVAYL-QTFRTNNKLAQ--RQNKKDFQEYFKNSQNKYVVSFPNLNKDTMLVVPMPVRGKNYATLRDFIDNASEIQQQEFWKKVAEVAKKFMNEKGKVWISVHGLGVDYTHVRISTSPKYYFDNELK 160
BLAST of mRNA_L-elsbetiae_contig900.18021.1 vs. uniprot
Match: A0A6C0HMK7_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HMK7_9ZZZZ) HSP 1 Score: 85.1 bits (209), Expect = 2.920e-17 Identity = 52/159 (32.70%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 157 WKDTIKAWKAG---KHFPDITGSVFWETSAIKNGGNVLYKEQTESASGDLPMSLRGDSSIFKAHLKNKTSAVMFYSPSR-TLLVAP-PDKKKNYSHLATFYKNASQREINSLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDVLE 618 W D + W+ G K+ ++ G W TS +KN GNV + + + + + D + +NK V F + S+ T+LV P P + KNY+ L F NA + + WK VA +K + +++S HG GVN+ HVRIS+ P+YY + L+ Sbjct: 3 WSDVLTNWENGITLKYPKNVKGKFQWNTSVLKNDGNVAFTQTFRTNEKLAQIQNKKDFEEYIEKSQNKY-VVSFPNLSKDTMLVIPMPIQGKNYATLRDFIDNAPKTQQQEFWKHVAKVAKKFMNEKGKVWISVHGLGVNYTHVRISTRPKYYFDNELK 160
BLAST of mRNA_L-elsbetiae_contig900.18021.1 vs. uniprot
Match: A0A2D7CMB5_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7CMB5_9PROT) HSP 1 Score: 81.6 bits (200), Expect = 7.690e-16 Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 220 FWETSAIKNGGNVLYKEQTESASGDLPMSLRGDSSIFKAHLKN-----KTSAVMFYSPSRT-LLVAP-PDKKKNYSHLATFYKNASQREINSLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPR 594 +++TS + YKE + G + D S FK H++ K A F +P+ T +LV P P K KN++H F +NAS R+ +WK VA +EK LK D++++STHG V +LH+RI P+ Sbjct: 8 YFQTSCCNKDKSKNYKETWKKTDG---FKTKQDYSKFKEHIEKAQKEGKKFATHFLNPTGTNILVVPMPKKGKNFAHFRLFCENASVRQKKEVWKYVAEQVEKALKKSDIIFISTHGKDVPYLHIRIECFPK 136
BLAST of mRNA_L-elsbetiae_contig900.18021.1 vs. uniprot
Match: A0A6T6WIS4_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6WIS4_9EUKA) HSP 1 Score: 78.2 bits (191), Expect = 1.620e-14 Identity = 51/165 (30.91%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 154 TWKDTIKAWKAGKHFPDITG---------SVFWETSAIKNGGNVLYKEQTESASGDLPMSLRGDSSIFKAH---LKNKTSAVMFYSPSR-TLLVAPPDKKKN---YSHLATFYKNASQREINSLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYY 600 TW + K K F +WE + +K+G E S L ++ DS F H LK S +F + R L+ P KN ++HLA F +NA + + +LW+ + L+ + ++VSTHGTGV WLHVRI + P+YY Sbjct: 2 TWSGYVSLLKRNKTFRAFFSYALAKVPFKGYYWECNPVKSGLFDRLLEMAFVESSQLS-DIKADSKRFDMHIQKLKGSNSVSVFPNLGRDAYLIVPAQSTKNAQTFAHLAAFVRNAPEDQKQALWEKTGKTFQTVLEQNKTVWVSTHGTGVYWLHVRIDTRPKYY 165
BLAST of mRNA_L-elsbetiae_contig900.18021.1 vs. uniprot
Match: A0A5J4EAD9_9BACT (Uncharacterized protein n=1 Tax=bacterium MnTg04 TaxID=2080454 RepID=A0A5J4EAD9_9BACT) HSP 1 Score: 67.0 bits (162), Expect = 3.740e-10 Identity = 44/173 (25.43%), Postives = 80/173 (46.24%), Query Frame = 1 Query: 157 WKDTIKAWKAGKHFPDITGSV---------FWETSAIKNGGNVLYKEQTESASGDLPM--SLRGDSSIFKAHLKNKT---SAVMFYSPSRTLLVAPP---DKKKNYSHLATFYKNASQREINSLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDVLEAC 624 + ++AW+ + F S+ +WET + + + ++ E D ++R D F ++ ++ V F++ + L+ P Y+HLA F +NA + ++ WK V + + L + L++ST GTG+ WLHVR+ S P+YY D +C Sbjct: 28 YSSVVEAWQEEEEFRSFFISLVTQAPFQALYWETPPVTS---ATFDQEFEFVLVDSSQLRNVRADPLTFASYFESSDVDDDIVTFWNLGKDALLVVPCPVGSDSAYAHLAEFTRNAPVAQQHAFWKHVGNAVRERLSDRP-LWLSTAGTGIFWLHVRLDSRPKYYTHDPYRSC 196 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig900.18021.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig900.18021.1 >prot_L-elsbetiae_contig900.18021.1 ID=prot_L-elsbetiae_contig900.18021.1|Name=mRNA_L-elsbetiae_contig900.18021.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=216bp MMVEYSTVTGLPLKPCKSGYVRNPLTNRCRKKCKPGYKRNARGTRPSPGRback to top mRNA from alignment at L-elsbetiae_contig900:26001..26921- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig900.18021.1 ID=mRNA_L-elsbetiae_contig900.18021.1|Name=mRNA_L-elsbetiae_contig900.18021.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=921bp|location=Sequence derived from alignment at L-elsbetiae_contig900:26001..26921- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig900:26001..26921- >mRNA_L-elsbetiae_contig900.18021.1 ID=mRNA_L-elsbetiae_contig900.18021.1|Name=mRNA_L-elsbetiae_contig900.18021.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1296bp|location=Sequence derived from alignment at L-elsbetiae_contig900:26001..26921- (Laminarionema elsbetiae ELsaHSoW15)back to top |