mRNA_L-elsbetiae_contig8985.17985.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8985.17985.1
Unique NamemRNA_L-elsbetiae_contig8985.17985.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig8985.17985.1 vs. uniprot
Match: A0A6H5L0L8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L8_9PHAE)

HSP 1 Score: 545 bits (1405), Expect = 4.020e-190
Identity = 282/426 (66.20%), Postives = 343/426 (80.52%), Query Frame = 1 
Query:   73 WLACV-LGVGVAAMSFFCMGVLLRMFLLRRDFEIAARSPQLVILSGFFAYVMSMAVLLQWLLVNAGTSLPCWVVVWVSYAVFAFGIIPYFIRLVRLVVAYNQAYRAKFARFVKWTPMLRIWSAACAVLALRGAFFFGNKPEHYSSDGRDCYYFDDIPLMSLVVAFGAVPMLFIARSLIHVFDAFRIRQEMERVIGLSSLLCLFMVVIQLLVIFEALEDSPGLHTAVEVMTLLFGFNVFTHGLIVPMVTHYHNHGWAIVAVVPVEED-SSGDDFDGVHTFAVKGGDIAQRFARFVQDNLCMESWDFIVDAVKYEELVSSCSPDDQFDAFHIILDQYLLPTSPDEVNIESKMSKRMASFKSREAFTALDQESRVGVLAGPLDEIVRMLEQNLLNKFNARLSLEREAKKDARMAAAKGDTDLMELIKVS 1344
            W   V LG   A  S   +G+L+R+ +LR +FEIAARSPQLVIL+GF  Y++S++V++QW+L+  GT++PCWVV+WVSYAVFA GIIPYFIR+VRLVVAYNQ+YRAKFARFVKWTPM+RIW+ A   L LR  FFFG+KP H+SS+  +C+YFDDI LM+   AF  VP+L IARSLIHVFDAFRIRQEMER IG+   L + +V++Q+LV FE L DS  LH AVE M  LFG  VFTHGL+VP++ HY  +GW   +V+PVE++ SS +D DGV+  AVKGGD+A RF RFVQ+NLCMESWDFI+DAVKYE + SSC PDDQFD F I+L+QYLLPTSPDEVNI SKMSKRMASFK+REAFT L+QE R G+L  PLDEIVRMLEQNLLNKF +R++LEREAK++A+ A AKGD  LM L+KVS
Sbjct:    6 WSCAVSLGAVAAVGSVVWIGLLVRLHVLRHEFEIAARSPQLVILTGFTCYLLSLSVVVQWMLLCVGTNIPCWVVIWVSYAVFALGIIPYFIRVVRLVVAYNQSYRAKFARFVKWTPMMRIWAGATIGLVLRAVFFFGSKPVHFSSNAHECFYFDDILLMTGACAFTGVPILLIARSLIHVFDAFRIRQEMERAIGICMSLSMVIVLLQVLVYFEVLADSSELHFAVEAMAFLFGIQVFTHGLMVPLLAHYKEYGWVKPSVLPVEDETSSNEDVDGVYALAVKGGDMADRFGRFVQENLCMESWDFILDAVKYE-MESSCEPDDQFDEFLILLNQYLLPTSPDEVNISSKMSKRMASFKTREAFTQLEQEERRGILKEPLDEIVRMLEQNLLNKFQSRIALEREAKREAQQAEAKGDPALMALMKVS 430
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BLAST of mRNA_L-elsbetiae_contig8985.17985.1 vs. uniprot
Match: A0A6H5K5R8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R8_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 3.270e-89
Identity = 162/329 (49.24%), Postives = 207/329 (62.92%), Query Frame = 1 
Query:  319 FGIIPYFIRLVRLVVAYNQAYRAKFARFVKWTPMLRIWSAACAVLALRGAFFFGNKPEHYSSDGRDCYYFDDIPLMSLVVAFGAVPMLFIARSLIHVFDAFRIRQEMERV-IGLSSLLCLFMVVIQLLVIFEALEDSPGLHTAVEVMTLLFGFNVFTHGLIVPMVTHYHN--HGWAIVAVVPVEEDS--SGDDFDGVHTFAVKGGDIAQRFARFVQDNLCMESWDFIVDAVKYEELVSSC----SPDDQFDAFHIILDQYLLPTSPDEVNIESKMSKRMASFKSREAFTALDQESRVGVLAGPLDEIVRMLEQNLLNKFNARLSLEREA 1278
            F   PY IR VRLVVAYN+ YR K+ARFVK    L  W+  C  L +R   FFG  P HYSSD R+C+Y+DDI LM  V+ FG  PM  +A  +  V DAF++R+E+  V IG S  + +  V IQ+LV  E L D+  LH  VEV  LL G N+   GL++PMV  +      W    VVPV+E    S  D DGV   A  GG++A++F +F ++NLCMESWDF+VD V+YE +  S       D+QF+ F  IL+ YLLPTSPDE+NI S M KR+A F++REAF  L  E RV +   P DEIVR+LEQNLLNKF   ++L+R A
Sbjct:    2 FATTPYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVGCIGLTIRAGIFFGTDPAHYSSDMRECFYWDDIMLMGAVLLFGGAPMSCLAIRISRVHDAFKLREELCFVFIGCSCCVAVLWV-IQVLVELELLSDTSALHVVVEVQALLIGMNIGLSGLLLPMVRAHRGGVKAWFRATVVPVDETVAVSALDVDGVVGLASSGGEMAEQFGKFCRENLCMESWDFLVDVVRYERMAPSPIARNPEDEQFNCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTREAFNKLGLEERVSIFKEPFDEIVRVLEQNLLNKFQKLIALDRGA 329
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BLAST of mRNA_L-elsbetiae_contig8985.17985.1 vs. uniprot
Match: A0A6H5KE83_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE83_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 2.060e-53
Identity = 122/299 (40.80%), Postives = 165/299 (55.18%), Query Frame = 1 
Query:  502 SDGRDCYYFDDIPLMSLVVAFGAVPMLFIARSLIHVFDAFRIRQEMERVIGLSSLLCLFMVVIQLLVIFEALEDSPGLHTAVEVMTLLFGFNVFTHGLIVPMVTHYHN--HGWAIVAVVPVEEDS--SGDDFDGVHTFAVKGGDIAQRFARFVQDNLCMESWDFIVDAVKYEELVSSCS------------------------------------PDDQFDAFHIILDQYLLPTSPDEVNIESKMSKRMASFKSREAFTALDQESRVGVLAGPLDEIVRMLEQNLLNKFNARLSLEREA 1278
            SD R+C+Y+DDI L+ +++     PM  +A  +  V DAF+IR+E+  V    S     + VIQ+LV  + L D+  LH  V+V  LL G N+   GL++PMV  +      W    VVPV+E    S  D DGV   A   G++A++F +F ++NLCMESWD +VD V+YE +V S S                                     D+Q   F  IL+ YLLPTSPDE+NI S M KR+A F++REAF  L  E RV +   P DEIVR+LEQNLLNKF  R++L+R A
Sbjct:  189 SDMRECFYWDDIILVGVMILSSGPPMSCLAIRISRVNDAFKIREELCFVFIGCSCCAAVLWVIQVLVELDLLSDTSALHVVVQVQALLIGMNIGISGLLLPMVRTHRGGVKAWFRATVVPVDETVAVSALDVDGVVGLASSVGEMAEQFGKFCRENLCMESWDLLVDVVRYERMVPSPSNIFCRVGFDTRWSCLWNFSHPNGLTWFVRFADRENPEDEQLKCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTREAFNKLSLEERVSIFKEPFDEIVRVLEQNLLNKFQKRIALDRGA 487
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BLAST of mRNA_L-elsbetiae_contig8985.17985.1 vs. uniprot
Match: D8LQX1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX1_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 4.320e-53
Identity = 129/347 (37.18%), Postives = 167/347 (48.13%), Query Frame = 1 
Query:  331 PYFIRLVRLVVAYNQAYRAKFARFVKWTPMLRIWSAACAVLALRGAFFFGNKPEHYSSDGRDCYYFDDIPLMSLVVAFGAVPMLFIARSLIHVFDAFRIRQEMERVIGLSSLLCLFMVVIQLLVIFEALEDSPGLHTAVEVMTLLFGFNVFTHGLIVPMVTHYHNHG---WAIVAVVPVEE--DSSGDDFDGVHTFAVKGGDIAQRFARFVQDNLCMESWDFIVDAVKYEE----LVSSCSPDDQFDAFHIILDQYLLPTSPDEVNIESKMSKRMASFKSREAFTALDQESRVGVLAGPLDEIVRMLEQNLLNKFNARLSLEREAKKDARMAAAKGDTDLMELIKVS 1344
            PYFIR VRLV+AYN+ YR K+A+FVK      +      VL +R   FFG+ P HYSS                                                                                                L++PM    H  G   W    VVPVEE       D  GV   A  GG++AQ+F +F Q+NLCMESWDF+VD V+YE     LV++   D+QF++F  IL+QYLLPTSPDE+NI S MS R+ +F +R+AF  L  E R+G+L  P DEIVRMLEQNLLNKF  R++++REA+    +AAA GD DL+ ++K S
Sbjct:    2 PYFIRAVRLVIAYNRKYRLKYAKFVKRKHATGVLVLTFIVLTIRAGLFFGDDPAHYSS------------------------------------------------------------------------------------------------LLLPM-ARAHRGGVQEWFRATVVPVEEVFTVQASDECGVLRLASGGGELAQQFGKFCQENLCMESWDFLVDVVRYERIAPSLVANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGTRDAFNELSLEERIGILGEPFDEIVRMLEQNLLNKFQRRVAVDREAQL---LAAADGDVDLVTVLKAS 248
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BLAST of mRNA_L-elsbetiae_contig8985.17985.1 vs. uniprot
Match: D8LQW8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW8_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 1.450e-47
Identity = 95/177 (53.67%), Postives = 123/177 (69.49%), Query Frame = 1 
Query:  832 WAIVAVVPVEE--DSSGDDFDGVHTFAVKGGDIAQRFARFVQDNLCMESWDFIVDAVKYEE----LVSSCSPDDQFDAFHIILDQYLLPTSPDEVNIESKMSKRMASFKSREAFTALDQESRVGVLAGPLDEIVRMLEQNLLNKFNARLSLEREAKKDARMAAAKGDTDLMELIKVS 1344
            W    VVPVEE       D  GV   A  GG++AQ+F +F Q+NLCMESWDF+VD V+YE     L+++   D+QF++F  IL+QYLLPTSPDE+NI S MS R+ +F +REAF  L  E RVG+L  P DEIVRMLEQNLLNKF  R++++REA+    +AAA GD DL+ ++K S
Sbjct:   12 WFGATVVPVEEVFTVQASDECGVLRLASGGGELAQQFGKFCQENLCMESWDFLVDVVRYERIAPSLIANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGTREAFNELSLEERVGILKEPFDEIVRMLEQNLLNKFQRRVAVDREAQL---LAAADGDADLVTVLKAS 185
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BLAST of mRNA_L-elsbetiae_contig8985.17985.1 vs. uniprot
Match: A0A6H5JLH7_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH7_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 5.200e-47
Identity = 108/311 (34.73%), Postives = 166/311 (53.38%), Query Frame = 1 
Query:  340 IRLVRLVVAYNQAYRAKFARFVKWTPMLRIWSAACAVLALRGAFFFGNKPEHYSSDGRDCYYFDDIPLMSLVVAFGAVPMLFIARSLIHVFDAFRIRQEMERVIGLSSLLCLFMVVIQLLVIFEALEDSPGLHTAVEVMTLLFGFNVFTHGLIVPMVTHYHNHGWAIVAVVPVE-------EDSSGDDF-DGVHTFAVKGGDIAQRFARFVQDNLCMESWDFIVDAVKYEELVSSCSPDDQFDAFHIILDQYLLPTSPDEVNIESKMSKRMASFKSREAFTALDQESRVGVLAGPLDEIVRMLEQNLLNKF 1248
            +R VR+VV Y+ AYR K+A  VKWT + + W++   ++ +     +     HY  D   C +F++  ++  +    A    F+   L  V D +++R+E   V    S      ++IQ+L    A+ ++  LH  +E++ L+   +     +++ +  H     +    VVP E         SSG    DGV  +A +GG +A  F ++   +LC ESWDFIV A KYEE+     P++Q+  F  I ++YL PTSP EVNI SKM  +M S +    F++LD +SR  VL  PL E+VRMLE+NLLNKF
Sbjct:    2 LRAVRIVVIYHSAYRYKYAGLVKWTKLRKAWASITLLMVVVAIILYAISARHYRHD-YGCAFFEETIVIGTMALLNAPGFTFLLFKLSQVQDVYKLRREFTWVFNAVSSSTYVYILIQVLYKTGAVTETRTLHLVLEILALVIMLSFLFWMVLISVGIHDGWRWFGTSTVVPTEGWAVSASNRSSGPTHGDGVLGYAQEGGSVASMFEQYCMRSLCAESWDFIVAACKYEEI---SDPEEQYKMFLRITEEYLRPTSPQEVNISSKMQAKMVSLQDSVKFSSLDGDSRRNVLQEPLKEVVRMLEENLLNKF 308
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BLAST of mRNA_L-elsbetiae_contig8985.17985.1 vs. uniprot
Match: D8LQY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY9_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 7.680e-40
Identity = 94/269 (34.94%), Postives = 134/269 (49.81%), Query Frame = 1 
Query:  340 IRLVRLVVAYNQAYRAKFARFVKWTPMLRIWSAACAVLALRGAFFFGNKPEHYSSDGRDCYYFDDIPLMSLVVAFGAVPMLFIARSLIHVFDAFRIRQEMERVIGLSSLLCLFMVVIQLLVIFEALEDSPGLHTAVEVMTLLFGFNVFTHGLIVPMVTHYHNHGWAIVAVVPVEEDSSGDDFDGVHTFAVKGGDIAQRFARFVQDNLCMESWDFIVDAVKYEELVSSCSPDDQFDAFHIILDQYLLPTSPDEVNIESKMSKRMASFKSR 1146
            IR +RLV+AYN+ YR K+A+FVK    L  W+     L +R   FFG  P HYSSD R+C+Y+DDI ++ + + FG  P+  +   +  V DAF++R+E+ R I   S + + + VIQ+LV  E   D+P LH  VEV+ LL G N    GL++PM++                                                                      SP++QF++F  IL+QYLLPTSPDE+NI S MSK MA+F++R
Sbjct:    2 IRAIRLVIAYNRKYRLKYAKFVKRKRALGFWAVISIGLTVRAGLFFGTDPAHYSSDMRECFYWDDIFVVGIGLIFGGAPVSLLVIRISRVNDAFQLREELCRTIMGCSGIAVILWVIQVLVELEVWPDTPALHVVVEVLILLLGMNAGYWGLLLPMMS----------------------------------------------------------------------SPEEQFNSFLYILNQYLLPTSPDEINISSAMSKHMATFRTR 200
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BLAST of mRNA_L-elsbetiae_contig8985.17985.1 vs. uniprot
Match: A0A6H5KD71_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD71_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 5.710e-39
Identity = 106/297 (35.69%), Postives = 158/297 (53.20%), Query Frame = 1 
Query:  493 HYSSDGRDCYYFDDIPLMSLVVAFGAVPMLFIARSLIHVFDAFRIRQEMERVIGLSSLLCLFMVVIQLLVIFEALEDSPGLHTAVEVMTLLFGFNVFTHGLIVPMVTH-----------YHNHGWAIVAVVPVEEDSSGDDFDGVHTFAVKGGDIAQRFARFVQDNLCMESWDFIVDAVKYEELVSSCSPDDQFDAFHIILDQYLLPTSPDEVNIESKMSKRMASFKSREAFTALDQESRVGVLAGPLDEIVRMLEQNLLNKFNA-------RLSLEREAK--KDARMAAAKGDTDL 1323
            HY  D   C +F++  ++  ++   A   +F+   L  V D F++R+E   V  + S +    ++IQ+L    A+ ++  LH  +E++TL+   NV    +++ +  H               GWA+ A       + GD   GV  +A +GG +A  F  F   +LC ESWDFIV A KYEE+     P++Q++ F  I ++YL PTSP EVNI SKM  +M S +    F++LD +SR  VL  PL EIVRMLE+NLLNKF         R  LER+    + A  AAA+GD ++
Sbjct:   15 HYRHD-YGCAFFEETIVLGTMMLLNAPGFVFLLYKLSQVQDVFKLRREFTWVFNVVSSVTSVYMLIQVLYKTGAVTETRTLHLVLEILTLVVMLNVLFWMVLISVAIHDGWCWFGTPRVVPTEGWAVSASTRSSGPTHGD---GVLGYAQEGGSVASMFKHFCTRSLCAESWDFIVAACKYEEI---SDPEEQYEMFLRITEEYLQPTSPQEVNIGSKMQAKMVSLQDSVKFSSLDGDSRRNVLQEPLKEIVRMLEENLLNKFKQTPEMRKWREDLERQDWFIEQANSAAAEGDENM 304
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BLAST of mRNA_L-elsbetiae_contig8985.17985.1 vs. uniprot
Match: D7FYH4_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH4_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 4.240e-18
Identity = 43/87 (49.43%), Postives = 62/87 (71.26%), Query Frame = 1 
Query:  886 DGVHTFAVKGGDIAQRFARFVQDNLCMESWDFIVDAVKYEELVSSCSPDDQFDAFHIILDQYLLPTSPDEVNIESKMSKRMASFKSR 1146
            +GV     +GGD+++RF  + + NLC+ESWDF+VDA  YE ++ +   D+QF  F +I D+YLL TSPDEVNI S  SK +A+F++R
Sbjct:    5 EGVLALVREGGDMSKRFEHYCKTNLCLESWDFLVDATLYE-MMDATDADEQFMTFTMISDRYLLATSPDEVNISSATSKHVAAFRTR 90
[Close]
BLAST of mRNA_L-elsbetiae_contig8985.17985.1 vs. uniprot
Match: D7FYH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH3_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.400e-16
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 1 
Query:  886 DGVHTFAVKGGDIAQRFARFVQDNLCMESWDFIVDAVKYEELVSSCSPDDQFDAFHIILDQYLLPTSPDEVNIESKMSKRMASFKSR 1146
            +GV     +GGD+++RF  + + NLC+ESWDF++D   YE ++ +   D+QF AF +I D+YLL TSPDEVNI     K MA+F++R
Sbjct:    5 EGVLALVREGGDMSKRFEHYCKMNLCLESWDFLIDRALYE-MMDTTHADEQFMAFTMISDRYLLATSPDEVNIAGATRKHMAAFRTR 90
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8985.17985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5L0L8_9PHAE4.020e-19066.20RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K5R8_9PHAE3.270e-8949.24RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KE83_9PHAE2.060e-5340.80RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQX1_ECTSI4.320e-5337.18RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQW8_ECTSI1.450e-4753.67RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JLH7_9PHAE5.200e-4734.73RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQY9_ECTSI7.680e-4034.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD71_9PHAE5.710e-3935.69RGS domain-containing protein n=3 Tax=Ectocarpus s... [more]
D7FYH4_ECTSI4.240e-1849.43RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYH3_ECTSI1.400e-1647.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8985contigL-elsbetiae_contig8985:1422..6785 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionRGS domain
Ec32 orthologEc-07_002250.1
Exons9
Model size1346
Cds size1344
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816972.6677632-CDS-L-elsbetiae_contig8985:1421..17311622816972.6677632-CDS-L-elsbetiae_contig8985:1421..1731Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 1422..1731 +
1691683952.188959-CDS-L-elsbetiae_contig8985:1421..17311691683952.188959-CDS-L-elsbetiae_contig8985:1421..1731Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 1422..1731 +
1622816972.6801357-CDS-L-elsbetiae_contig8985:2539..27321622816972.6801357-CDS-L-elsbetiae_contig8985:2539..2732Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 2540..2732 +
1691683952.2011683-CDS-L-elsbetiae_contig8985:2539..27321691683952.2011683-CDS-L-elsbetiae_contig8985:2539..2732Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 2540..2732 +
1622816972.694667-CDS-L-elsbetiae_contig8985:3260..34301622816972.694667-CDS-L-elsbetiae_contig8985:3260..3430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 3261..3430 +
1691683952.2140281-CDS-L-elsbetiae_contig8985:3260..34301691683952.2140281-CDS-L-elsbetiae_contig8985:3260..3430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 3261..3430 +
1622816972.7049146-CDS-L-elsbetiae_contig8985:3943..40611622816972.7049146-CDS-L-elsbetiae_contig8985:3943..4061Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 3944..4061 +
1691683952.224539-CDS-L-elsbetiae_contig8985:3943..40611691683952.224539-CDS-L-elsbetiae_contig8985:3943..4061Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 3944..4061 +
1622816972.7166998-CDS-L-elsbetiae_contig8985:4494..46641622816972.7166998-CDS-L-elsbetiae_contig8985:4494..4664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 4495..4664 +
1691683952.234651-CDS-L-elsbetiae_contig8985:4494..46641691683952.234651-CDS-L-elsbetiae_contig8985:4494..4664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 4495..4664 +
1622816972.7269201-CDS-L-elsbetiae_contig8985:4877..49401622816972.7269201-CDS-L-elsbetiae_contig8985:4877..4940Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 4878..4940 +
1691683952.2452745-CDS-L-elsbetiae_contig8985:4877..49401691683952.2452745-CDS-L-elsbetiae_contig8985:4877..4940Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 4878..4940 +
1622816972.7377439-CDS-L-elsbetiae_contig8985:5247..53681622816972.7377439-CDS-L-elsbetiae_contig8985:5247..5368Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 5248..5368 +
1691683952.2606683-CDS-L-elsbetiae_contig8985:5247..53681691683952.2606683-CDS-L-elsbetiae_contig8985:5247..5368Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 5248..5368 +
1622816972.7490003-CDS-L-elsbetiae_contig8985:6030..61581622816972.7490003-CDS-L-elsbetiae_contig8985:6030..6158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 6031..6158 +
1691683952.2700074-CDS-L-elsbetiae_contig8985:6030..61581691683952.2700074-CDS-L-elsbetiae_contig8985:6030..6158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 6031..6158 +
1622816972.7602618-CDS-L-elsbetiae_contig8985:6714..67851622816972.7602618-CDS-L-elsbetiae_contig8985:6714..6785Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 6715..6785 +
1691683952.2784605-CDS-L-elsbetiae_contig8985:6714..67851691683952.2784605-CDS-L-elsbetiae_contig8985:6714..6785Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8985 6715..6785 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8985.17985.1prot_L-elsbetiae_contig8985.17985.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8985 1422..6785 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8985.17985.1

>prot_L-elsbetiae_contig8985.17985.1 ID=prot_L-elsbetiae_contig8985.17985.1|Name=mRNA_L-elsbetiae_contig8985.17985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=448bp
PDESCALASQPHQGRHTGRYPDMLWLACVLGVGVAAMSFFCMGVLLRMFL
LRRDFEIAARSPQLVILSGFFAYVMSMAVLLQWLLVNAGTSLPCWVVVWV
SYAVFAFGIIPYFIRLVRLVVAYNQAYRAKFARFVKWTPMLRIWSAACAV
LALRGAFFFGNKPEHYSSDGRDCYYFDDIPLMSLVVAFGAVPMLFIARSL
IHVFDAFRIRQEMERVIGLSSLLCLFMVVIQLLVIFEALEDSPGLHTAVE
VMTLLFGFNVFTHGLIVPMVTHYHNHGWAIVAVVPVEEDSSGDDFDGVHT
FAVKGGDIAQRFARFVQDNLCMESWDFIVDAVKYEELVSSCSPDDQFDAF
HIILDQYLLPTSPDEVNIESKMSKRMASFKSREAFTALDQESRVGVLAGP
LDEIVRMLEQNLLNKFNARLSLEREAKKDARMAAAKGDTDLMELIKVS
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mRNA from alignment at L-elsbetiae_contig8985:1422..6785+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8985.17985.1 ID=mRNA_L-elsbetiae_contig8985.17985.1|Name=mRNA_L-elsbetiae_contig8985.17985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5364bp|location=Sequence derived from alignment at L-elsbetiae_contig8985:1422..6785+ (Laminarionema elsbetiae ELsaHSoW15)
CCAGATGAATCGTGCGCACTCGCAAGTCAGCCGCACCAAGGGCGACATAC
CGGGCGCTACCCGGACATGTTGTGGTTGGCATGTGTTCTAGGTGTAGGCG
TGGCGGCCATGTCGTTTTTTTGCATGGGGGTCTTGCTGAGGATGTTTCTT
CTGCGCCGCGACTTCGAAATTGCCGCTCGCTCTCCTCAGCTCGTGATCCT
CTCCGGGTTTTTTGCTTACGTAATGTCCATGGCGGTGCTCCTGCAGTGGC
TTCTGGTAAACGCGGGCACGAGCCTTCCTTGCTGGGTCGTCGTATGGGTG
TCTTATGCTGGTGAGTCAACCTGTTAAGGCGTCAAGGCTGTAGTAGTCTT
CTATTCACAGCCAGCTAGTCTACGCGGTTACGTGTGTCGGGACAAAAAAA
TGTCGATGGCGGTACTTTTCTTCATGCAGAAATATCCTAACCCCATTCGT
CAATACCATACCATTCTTCGTTGTGGCTTCGTTGTGGCGATGCCCCATCA
AGCACTCTCCAGCTATTTATTTGCTCTGGGATTAAAACTTTAATTATTTG
GGTATCGGCGTTAGCAACGCGACGTGAATTGGTACATAGTCGTTTTGAAA
AGTGTAGGCACTCGTGCTCTACCTACTACATTTATGTATGTATGTAGTTT
GTACTTTGCACAGAGCAACATTGGGACATTGTTACCCAACTTTCTCCCTC
GAGAAACTGCATCGTATCAGAAGCTTGAAGCCTGGAAGGTTGGAAGAGAA
AGGGACATTGTCTTTCTCCGTCGGGTGACAAAACTGACTGCGTGGAATAA
CCATTATTGTCAAAACTAATACCACGGCGGACACAGTCCCTTTGAAGCTC
TTGTTCGTTCTCCCACATTTCGAGCGACGCAGCAAAACGTGCAACAGTTC
TGTTAGTGCCAACAACCCTCTCCTTCCGCTGCATCAAATTGTTCCGTTTT
CGCAATCAAGACGCGCCCTCACCATTTTGAACGCGACACAGCAGGAACGC
GTTGAAGGCAAAGAGCCGTCCTTGAAATAGGTCAATAAATACGCTGCTCG
TTCGCGATTTCCCGCTCTTACCTCGACCCCCGCCCCGTGCTTCGCTCGCG
GACCTGGTCGCATTGCAGTGTTCGCCTTTGGCATCATCCCGTATTTCATC
CGCCTCGTCCGCCTGGTGGTAGCTTATAACCAAGCTTACCGAGCGAAGTT
CGCACGGTTCGTAAAGTGGACACCAATGCTTCGCATATGGTCTGCTGCAT
GCGCGGTTCTGGCCCTTCGAGGTGCTTTCTTCTTCGGCAATAAACCCGAG
CACTACTCGAGGTACACACGTCTGGGTGGCACCGACACGAAGCGTACCAG
GCCGTGCTGCCTCTGATATGTAGTCTAGCCAATGCGAAGCTGCCGGAGGG
GGCATCTTCCGGAGTAATGCGAGCTTGTCTTCCTCCTACGGGTTGTCTCG
ATTATGATCTTTTTCTTCGGACACCCTTGTACGATACCATGGCACAGCTT
GTCCTTTGATGGGGGACATATTATACGCTCGGTATAATTGCTCAACCCTG
TGCAAAAACACCAGAGTTTTCACGGCGCAACAAGAAATGTTAAAACCGAG
CGCTATGAAGGTTAGCTTCCTGGACTTTTCATGCCTCCGAGACAAGTACT
AGAAAATATGTGGAGGGCAGTATGTATTGTAGTACCATGCCACCCATAGA
TCATGTTTACTCTCACGTATCCGCGGCGTGGCCATAGAGAGTCGAGCGCC
ATTTAATAACTCAGTAGGACATGATATTTTCCTCTAATCTAACCTCAACG
AAGCCCGCGTCTGTCATCGATCACTCTTACACCGTGCAGCGACGGTCGCG
ACTGCTACTACTTCGACGACATCCCTCTGATGTCACTCGTGGTGGCGTTT
GGTGCAGTGCCGATGCTATTCATTGCCAGAAGCCTCATACACGTCTTTGA
TGCCTTCCGAATTCGCCAAGAGATGGAGCGGGTCATCGGTTTGTCCTCCC
TTCTCTGTCGTGAGTCGACTGATAGACAGAGGGCGAACGATTGTCTCGGC
AGTGGTCCAAGAGAAAGTTAGACGCGTAGTGCAAAGCTCCCGGGATATTC
ACCGGCTTCACATAAAGCTGCGAGGAGATGGTCTAGTTAGAAACAAGAGT
AGCAGTTACGGGTGGTCGGTCCCACATGCACCGTGCGGTTCATACCCATC
GTGAACTTGGAGGACGAGGAACACGGGGTAGAACTATTCTTGACCGAGTT
CTTGCCCTATTTTGACTCTTGCCTACTATTAGTGCGCACCGCTCGCTGTA
AACGTGTAGCGTATCGGACATTCCTTCTGTCGGCGTATGTCGGGATGGGA
GTAAATCGTGGTATTCGCACATACGTATCGTTTCACATCATGAGTATAGA
GACACCATGTTTCAACACAAATCTACCTTTTTCACGAGCAGCGTGCCGCC
TGACGTGAACACAACGACATATTATTTGCCGACCGCCGTCCCATGCTCGC
GGTTCGTTATCTTCTTCCACAGTCTTTATGGTTGTCATCCAACTTCTGGT
GATTTTTGAGGCCTTGGAGGACTCGCCCGGGCTCCACACGGCGGTAGAAG
TGATGACGCTATTGTTCGGGTTCAACGTCTTCACTCATGGGTAACCCCGA
CAACCATGACACAATATTGTGGATGTGGCTTGCAGTATGTAGTACTGAAA
TAACTGCAGTGAATCCCCGCTTGAACAATCATAGCTTCTTGTTTCGGGGC
GAAGGAGAAAGCCTGGAATCTTCCTACTTATTTCCAACAGCGTTGGTATT
CATCAGAATCTCGCCTTGCCGCCAGGGCTGTTTCTGCGATGACTCACGCG
CACGGACGACGGCGAGCGTGCCCGGCTACGAGCGAAAACACATTGTTTTC
GGCGATCAGCCGAGCTGATTCACGAATGAGTGCCGTGCTGCTCCTTGCCT
CCATTCACTACATGCATACCTAGAAGGAAGCTCCACATCTGATTTCCATT
AATCTCGAAATGAAGACGGTCATCGTTTCCCTCTCATCGTAAATGCCGGC
TCGCGCTTCCGGTCGTCTCACAGCTTGATTGTTCCCATGGTGACTCACTA
CCACAACCACGGATGGGCAATAGTCGCCGTTGTCCCAGTTGAGGAAGATT
CATCTGGCGATGATTTCGATGGCGTGCACACGTTTGCTGTCAAAGGCGGA
GACATCGCGCAGCGATTCGCACGCTTCGTGCAGGACAATTTATGTGAGAA
TAATGCCGTGTTCATTTTAAGCACAATAAGAGAAGAGACGTCGAGAGCGT
GAATAATAAGCATGACGTTGTCGCGGAAATGCCACATGTGCTTCTTTCGT
GTGTACCGTCAAACAAGCATACGCTCGCAGCCACGGGCGTCAATACACGG
CAACAATAGTTCATGCATCGTTCGCGTGCTTGTCGGCTCATTTTGACTTT
TGTCAGGCATGGAGTCCTGGGACTTCATCGTCGACGCGGTCAAGTACGAG
GAACTGGTCAGTTCGTGCAGTTGTTGGGTCGTCTCCGTTTCGCGCCTCTA
CACACTCTAGGGAATGTTAGCACTGCGCTAGCAAGATGGCCGGAAGAAAT
ACTTCCTTCGGGTGTTGAGCAAATGGCCGATGTTGTTCGGCTGCAACGCG
ACGATGCCCAGTGTCCGTTTGGAAACCTATCCCGCCCACTAACGCCGCCC
AGTGTTCATACAAAGTACCGATAGACGTTGCGTAGCCAAGGCGCATTCTC
TTGTCCCTCTCCTTTGCGGCAACGACGTCTTGTCCTTCTTTCTTCTCTCG
GGTGTGATCGCAGGCTCCGTCGATAGGTCCAGACGATCAGTTTGACGCGT
TCCATATTATTTTGGATCAGTACCTACTGCCTACCTCTCCGGACGAGGTT
AACATCGAATCGAAGATGAGCAAGCGGATGGCATCCTTCAAGTCGAGGTA
CATTTCTACTCTGCCTTCAGCGTTTTACCCGTGAGCCGCCCTGGAAGGGT
TTGCGTAGACCCTAGTATAAGTCAGCTAGCTCACTTCTCGAGTCTTGCTA
CTTTATGGGATTCACTCTGGAAATATGTCATCCTCCGAAGAGTCGCAGGG
TTAATAATAATGTGGGTCCATTTGTAGGGGGGCGGGGAACTGAACGCGAT
TACTAAGACTACGTGTGTACACAGTAAGAGGCAAGTTCAGCGATTCTTGA
AGCACTGGAATGCAAAAAACGTATATATACGGTGCATGGAACCTCGAACT
GGATTGGCTTTCACCCCGCTCTCGCTTCATCGCGTCTTTCTGCCCTCCTC
ACCCATTAGAGCGGTAGCTAAAGGCGGTGCACGTGCCCCGTGGTCTACAT
GTGGGGCTATCGGCTTATCGTTACAGGAGAGATTGCAGCGAGTGTTTCGA
CATCGGTTGAGGCGTAATCTGCAACGGCACACACATGCTATCGCACAGCA
ACAAGCCACTCTCCTCGTACTCATGCGCCCAGAATGTCCCTGGTGGCCAA
TCTACCCTACTAGACTATATAGAACGCATCTGTCTGTGTAAATGGGTTGC
TGACTCAAACGTACTGCCGCCGCTGTCTCACGTCTACGAAACCGAATGCC
GCCCTGCAGAGAGGCGTTTACTGCACTGGACCAGGAGTCACGGGTTGGCG
TCTTGGCGGGCCCCCTCGACGAGATCGTCAGGATGCTCGAGCAAAACCTG
CTCAATAAATTCAACGCCCGACTTTCCTTAGAAAGAGGTACTACGTTAGA
CGTCACAATAAGTCATTTTGCATCACCACTTCTATGTCTGAGGGGGCGGG
TGAACTCACGAAAAAATCCATAGACCTGCCATGCAGCTTTTGCGTTGGTA
GCAGCCATTTGAAAACAATTCGAAATGCTGTTACTATCTGTATTATTGTG
CCCTACTCCGTTGATCTACGCCGCACGCAAACCCGTATTTTGTCTCGTGC
GAGAGCCTGGAACTTAGTGCCCAATTCTTCCATCTGGGCGCTGCAATAAT
AGTATGTGTACGAAACCGGGTGCGAGGCTCAAATCTGTCGCGAGGGTCAG
AGTAATTCCTGCTTTGAATGGAATTGGGTGCGTCCACCGGGCTCCCTCCT
TCGTGGGGCCGCCTACACAACAGTTGCGCAGTCACTTGCAGCTTTACAGC
TGCGCATGCCCCTTTCAGCCCGCAGTGCTCGGTCCATCCTTGCCTGTGCT
TCGGCGTTGCTGCCTTCACGCCTTGGCTTCCCGTCTGACGTGTCAACGCC
TACTTGGCATATGTGCGTTTGGCTAACTGCCTCTCACCACCAGAGGCCAA
AAAGGACGCCCGAATGGCAGCGGCCAAGGGAGACACGGATCTCATGGAAC
TAATCAAAGTCTCA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8985:1422..6785+

>mRNA_L-elsbetiae_contig8985.17985.1 ID=mRNA_L-elsbetiae_contig8985.17985.1|Name=mRNA_L-elsbetiae_contig8985.17985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2688bp|location=Sequence derived from alignment at L-elsbetiae_contig8985:1422..6785+ (Laminarionema elsbetiae ELsaHSoW15)
CCAGATGAATCGTGCGCACTCGCAAGTCAGCCGCACCAAGGGCGACATAC
CGGGCGCTACCCGGACATGTTGTGGTTGGCATGTGTTCTAGGTGTAGGCG
TGGCGGCCATGTCGTTTTTTTGCATGGGGGTCTTGCTGAGGATGTTTCTT
CTGCGCCGCGACTTCGAAATTGCCGCTCGCTCTCCTCAGCTCGTGATCCT
CTCCGGGTTTTTTGCTTACGTAATGTCCATGGCGGTGCTCCTGCAGTGGC
TTCTGGTAAACGCGGGCACGAGCCTTCCTTGCTGGGTCGTCGTATGGGTG
TCTTATGCTGCCAGATGAATCGTGCGCACTCGCAAGTCAGCCGCACCAAG
GGCGACATACCGGGCGCTACCCGGACATGTTGTGGTTGGCATGTGTTCTA
GGTGTAGGCGTGGCGGCCATGTCGTTTTTTTGCATGGGGGTCTTGCTGAG
GATGTTTCTTCTGCGCCGCGACTTCGAAATTGCCGCTCGCTCTCCTCAGC
TCGTGATCCTCTCCGGGTTTTTTGCTTACGTAATGTCCATGGCGGTGCTC
CTGCAGTGGCTTCTGGTAAACGCGGGCACGAGCCTTCCTTGCTGGGTCGT
CGTATGGGTGTCTTATGCTGTGTTCGCCTTTGGCATCATCCCGTATTTCA
TCCGCCTCGTCCGCCTGGTGGTAGCTTATAACCAAGCTTACCGAGCGAAG
TTCGCACGGTTCGTAAAGTGGACACCAATGCTTCGCATATGGTCTGCTGC
ATGCGCGGTTCTGGCCCTTCGAGGTGCTTTCTTCTTCGGCAATAAACCCG
AGCACTACTCGAGTGTTCGCCTTTGGCATCATCCCGTATTTCATCCGCCT
CGTCCGCCTGGTGGTAGCTTATAACCAAGCTTACCGAGCGAAGTTCGCAC
GGTTCGTAAAGTGGACACCAATGCTTCGCATATGGTCTGCTGCATGCGCG
GTTCTGGCCCTTCGAGGTGCTTTCTTCTTCGGCAATAAACCCGAGCACTA
CTCGAGCGACGGTCGCGACTGCTACTACTTCGACGACATCCCTCTGATGT
CACTCGTGGTGGCGTTTGGTGCAGTGCCGATGCTATTCATTGCCAGAAGC
CTCATACACGTCTTTGATGCCTTCCGAATTCGCCAAGAGATGGAGCGGGT
CATCGGTTTGTCCTCCCTTCTCTGTCCGACGGTCGCGACTGCTACTACTT
CGACGACATCCCTCTGATGTCACTCGTGGTGGCGTTTGGTGCAGTGCCGA
TGCTATTCATTGCCAGAAGCCTCATACACGTCTTTGATGCCTTCCGAATT
CGCCAAGAGATGGAGCGGGTCATCGGTTTGTCCTCCCTTCTCTGTCTCTT
TATGGTTGTCATCCAACTTCTGGTGATTTTTGAGGCCTTGGAGGACTCGC
CCGGGCTCCACACGGCGGTAGAAGTGATGACGCTATTGTTCGGGTTCAAC
GTCTTCACTCATGGTCTTTATGGTTGTCATCCAACTTCTGGTGATTTTTG
AGGCCTTGGAGGACTCGCCCGGGCTCCACACGGCGGTAGAAGTGATGACG
CTATTGTTCGGGTTCAACGTCTTCACTCATGGCTTGATTGTTCCCATGGT
GACTCACTACCACAACCACGGATGGGCAATAGTCGCCGTTGTCCCAGTTG
AGGAAGATTCATCTGGCGATGATTTCGATGGCGTGCACACGTTTGCTGTC
AAAGGCGGAGACATCGCGCAGCGATTCGCACGCTTCGTGCAGGACAATTT
ATCTTGATTGTTCCCATGGTGACTCACTACCACAACCACGGATGGGCAAT
AGTCGCCGTTGTCCCAGTTGAGGAAGATTCATCTGGCGATGATTTCGATG
GCGTGCACACGTTTGCTGTCAAAGGCGGAGACATCGCGCAGCGATTCGCA
CGCTTCGTGCAGGACAATTTATGCATGGAGTCCTGGGACTTCATCGTCGA
CGCGGTCAAGTACGAGGAACTGGTCAGTTCGTGCAGCATGGAGTCCTGGG
ACTTCATCGTCGACGCGGTCAAGTACGAGGAACTGGTCAGTTCGTGCAGT
CCAGACGATCAGTTTGACGCGTTCCATATTATTTTGGATCAGTACCTACT
GCCTACCTCTCCGGACGAGGTTAACATCGAATCGAAGATGAGCAAGCGGA
TGGCATCCTTCAAGTCGAGGTCCAGACGATCAGTTTGACGCGTTCCATAT
TATTTTGGATCAGTACCTACTGCCTACCTCTCCGGACGAGGTTAACATCG
AATCGAAGATGAGCAAGCGGATGGCATCCTTCAAGTCGAGAGAGGCGTTT
ACTGCACTGGACCAGGAGTCACGGGTTGGCGTCTTGGCGGGCCCCCTCGA
CGAGATCGTCAGGATGCTCGAGCAAAACCTGCTCAATAAATTCAACGCCC
GACTTTCCTTAGAAAGAGAGAGGCGTTTACTGCACTGGACCAGGAGTCAC
GGGTTGGCGTCTTGGCGGGCCCCCTCGACGAGATCGTCAGGATGCTCGAG
CAAAACCTGCTCAATAAATTCAACGCCCGACTTTCCTTAGAAAGAGAGGC
CAAAAAGGACGCCCGAATGGCAGCGGCCAAGGGAGACACGGATCTCATGG
AACTAATCAAAGTCTCAAGGCCAAAAAGGACGCCCGAATGGCAGCGGCCA
AGGGAGACACGGATCTCATGGAACTAATCAAAGTCTCA
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