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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1996 |
| Cds size | 1995 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816968.55848-CDS-L-elsbetiae_contig8916:1825..2414 | 1622816968.55848-CDS-L-elsbetiae_contig8916:1825..2414 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8916 1826..2414 + |
| 1691683949.2117682-CDS-L-elsbetiae_contig8916:1825..2414 | 1691683949.2117682-CDS-L-elsbetiae_contig8916:1825..2414 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8916 1826..2414 + |
| 1622816968.5698137-CDS-L-elsbetiae_contig8916:3128..3201 | 1622816968.5698137-CDS-L-elsbetiae_contig8916:3128..3201 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8916 3129..3201 + |
| 1691683949.2227323-CDS-L-elsbetiae_contig8916:3128..3201 | 1691683949.2227323-CDS-L-elsbetiae_contig8916:3128..3201 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8916 3129..3201 + |
| 1622816968.5814672-CDS-L-elsbetiae_contig8916:3914..5247 | 1622816968.5814672-CDS-L-elsbetiae_contig8916:3914..5247 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8916 3915..5247 + |
| 1691683949.2323792-CDS-L-elsbetiae_contig8916:3914..5247 | 1691683949.2323792-CDS-L-elsbetiae_contig8916:3914..5247 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8916 3915..5247 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8916.17937.1 >prot_L-elsbetiae_contig8916.17937.1 ID=prot_L-elsbetiae_contig8916.17937.1|Name=mRNA_L-elsbetiae_contig8916.17937.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=665bp
MRDNTGKLDPGASLHAVSISSRLPRTAGSMASPRGVNMVQRSQRWHSNSG
KNKKNNSNSVATATTTTTTKNNSENNGSNSNRNIQLGQNISGNGHEDTAA
PPQGEDNSTLPNSAWTCQNDPSNGNGNDKHERAAVGDISASTQLNIKRRR
ARSFTSTTVFVRSRQWGMRRPNRTESFRRAATEDDMLSVHQLAVSGELQD
AHMSADIECVQTESTVGTTSRQRLLANASPPGGTKHESSRGAWPRPASAG
LLYFRAHLNRSGERVVVAPWERRDGHIVAHTSAAKPGLLFQGDRNAGPES
IPQAGGTTPNTVGAVGEIPGQLTEPLMVTAARGRTRSRARGFGDISSSAA
VTGAEEWAHDSTNPITTARTTLDWKPPFSPVVLPSDILSSPRIEHGTREN
TDIVTLRVKEAESDPRIEDSRPSSGQKTKQLPAEAEAATVATNPENYSLL
TCREDGLPVGSCKVETTTAAQAALGTCKEVKYVHHHVSTLEMISAMAHAT
PSAPPECVQGVEIAIPTKKRRPASSSPRRIRTAAGIDHRATDGDGRHGQE
TPSLPSLHKQEESIWETEEATQRAAAPSSLLLKSFSWTGGDELVDSAGRR
RGIPLQLQSEQAQGGRGDDPQESSWAEDRQLLYGVSRNIPRPCSVRATTS
TCTELGRPLPGSRGG back to topmRNA from alignment at L-elsbetiae_contig8916:1826..5247+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig8916.17937.1 ID=mRNA_L-elsbetiae_contig8916.17937.1|Name=mRNA_L-elsbetiae_contig8916.17937.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3422bp|location=Sequence derived from alignment at L-elsbetiae_contig8916:1826..5247+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCGAGATAACACAGGAAAGCTCGATCCCGGCGCGAGCTTGCACGCAGT
TTCGATCTCATCGAGGTTGCCTCGCACGGCCGGGTCGATGGCATCACCGC
GGGGGGTCAACATGGTTCAGCGGAGCCAGAGGTGGCACAGCAACAGTGGC
AAAAACAAGAAAAATAACAGTAACAGCGTTGCCACCGCCACCACCACCAC
CACCACCAAGAACAATAGCGAGAACAATGGCAGCAACAGCAACCGCAACA
TTCAACTTGGCCAAAATATTTCTGGCAACGGCCACGAGGACACGGCCGCC
CCTCCACAAGGAGAAGACAATAGTACGCTGCCCAACAGTGCTTGGACGTG
TCAAAACGACCCCAGCAATGGAAATGGCAACGATAAACACGAGAGGGCAG
CAGTGGGTGACATCTCAGCCTCCACACAGCTGAACATCAAGAGGAGGCGC
GCTAGGAGTTTCACCAGCACCACCGTCTTCGTGCGGTCGAGGCAGTGGGG
AATGCGACGTCCAAACAGGACAGAATCCTTTCGTAGAGCGGCTACCGAGG
ATGACATGCTCAGTGTTCATCAACTGGCCGTTTCGGGAGGTAAGAGGCAA
CCCTCCTTCGTCGTGAATAAAAGCTCCACGTACAGCCGAGCGGCATGGAG
ACGCAGCACTTCAACGGAAACGTTCCAATACCGTAGGAAGCACGGCGCTA
CTGCACGAAACGATGGGAGAACGGGAGACAGCGGCAAGGATAGCCGAAAC
AGATTGGAGTTATCTTTCCCTTCCACCAGTGCAGCTGGTGCGGGTCACAC
TCAGGGCCTGGTAGAGCGAGAGAGAGCGGTGAAAACACCGTCGGCGACTC
GTGCGAGCTTGGTGGAACCTTCTGTTTCCATAGGTCCAGAAAAGCCTTCT
CGAGATTTTTATTCAGTACGGCGGAGGAAAGTTGACCCGCCCGCTGGAAG
TAAGCTACGCCCTGACAGCCGACGGTGGTTGTACCATAATCGCCCGCTTT
GTTGGCCTGCATCAGCAAATGCTACGACGAGACTACATAAGACAAAAGGT
AACGGGCTGCCAGCGACAGTAGTAAGACATGCGCTTGTAGCGGCTGACAC
AGAAAATGGCACATCGGCGTCAGCGGCATCAGCCACATTTCCTGCACCAA
CGGGTACTCGTGTGCCGTAGACTTTGTCGGTGGTGGTAGTCTGGGCTAGG
TCGTCTCCGCCGACGGAGGCGGCCAGAAAAAAGGAATCAACGTCCCGAGC
TGATGTGCATTGTTCGAAAATGGCTGTTTCGCGCGTCGCTTGTACCTATG
CAGAGCTTCAGGATGCACACATGTCAGCAGATATCGAGTGTGTGCAAACT
GAGAGCACTGTGGGTACAACTTCTAGGTGAGTTATGTCCTCTGCGCTGAA
CGGTTTCACCTGACATGAGTACTTGGTAGCTCTCGCGAAACGCCGGGCAT
ACGCCACCTTGGACTGATGAAATGTACAATAAATCGATCTGTTGCACCGG
AGGGCCAAGCATTTTCAGCAGTGGGTGCCAGGAAAGTGGCTTGAACGACC
GTCTCTTTGTTGCATGATCCTCACACCCGTCCATCAATTAAAAAAAATAA
TCGATGCATCAAAGATGGAACCTAGCCCACACAAGAGCAAGGACTCGATA
TGGGTTTCAATCGGTATTCCATACAGTGACGTAACATTTGGCGAAACAAG
CAGAAAAACACACCTAAAATATCAGAAGAGTTCAACATTTCCCCTGCAAA
GATTTGCGAGGTCGGTCAACAAGTATTACGACGGGTAGATGCCCGCCATG
ATGCCGTAATGTTGTCATCTACTTCAAAATAGGGACACATCGCATTGTTG
AACTAAATCCAAATGCTGGTTTAATATATACTTCTATGGGTTACTGCTTG
GAGGAAAATATACAATATTAGTGGTAGGTGATGAGGCAGTAGCCAGGATT
GGGAGGGATGGTATCTATTTAACACCGGCATCGCCTATTGTTAATATAGG
CCCTGTAGAACACTGCATACCGTTGCCTTCGATGCCAATGTGATGTTTCT
CCGACTTTTTCGAGTTCACGACCAATCAATACTTCACAGGCAACGCCTGT
TGGCAAACGCTTCGCCACCCGGCGGCACTAAACACGAAAGCAGCCGTGGT
GCATGGCCGCGACCAGCCTCGGCTGGCCTCCTGTACTTTCGAGCGCATTT
GAACCGCAGCGGTGAAAGAGTAGTGGTTGCTCCGTGGGAGAGACGAGATG
GGCATATTGTAGCACACACAAGCGCCGCAAAACCTGGTTTGCTGTTTCAA
GGAGACAGGAACGCGGGGCCGGAGTCAATACCACAGGCGGGTGGCACTAC
ACCGAACACGGTCGGCGCGGTGGGGGAAATACCGGGGCAGTTGACAGAGC
CCCTGATGGTGACAGCGGCAAGAGGACGCACGCGAAGTCGTGCAAGGGGC
TTCGGTGATATATCATCATCGGCAGCGGTGACCGGGGCGGAAGAGTGGGC
ACATGATTCAACGAATCCAATCACAACAGCGAGGACGACCTTGGACTGGA
AGCCACCCTTCTCGCCGGTCGTCCTTCCCTCGGATATTCTCTCTTCTCCG
AGGATCGAACACGGGACCCGAGAAAATACAGATATCGTCACCTTGCGAGT
AAAAGAAGCCGAGAGTGACCCCAGGATAGAGGATTCCAGACCTTCATCTG
GGCAAAAAACGAAGCAGCTCCCAGCAGAAGCAGAAGCGGCAACAGTAGCC
ACAAACCCAGAAAACTACTCGCTTTTAACTTGTCGAGAAGATGGCCTGCC
GGTCGGTTCTTGCAAGGTCGAGACAACAACAGCGGCACAAGCGGCGTTGG
GAACTTGCAAAGAAGTCAAATACGTCCATCATCATGTGTCGACGCTAGAG
ATGATCTCTGCCATGGCGCACGCCACGCCATCGGCGCCGCCAGAGTGCGT
TCAAGGCGTCGAGATCGCGATCCCGACGAAAAAGCGACGGCCCGCATCGT
CATCGCCTCGTCGCATTCGGACTGCGGCCGGCATTGATCACCGTGCTACC
GATGGTGATGGTCGCCACGGCCAGGAGACACCGTCACTTCCTTCCTTGCA
TAAACAAGAGGAGAGTATCTGGGAGACCGAAGAAGCGACCCAACGTGCTG
CGGCGCCTTCCAGCTTGTTGCTCAAGTCCTTCTCCTGGACCGGAGGAGAT
GAGCTAGTAGATTCGGCTGGCAGACGCCGGGGAATTCCCTTGCAACTGCA
ATCCGAGCAGGCGCAAGGCGGACGTGGTGACGATCCGCAGGAATCATCCT
GGGCCGAAGATCGGCAGCTGCTATATGGCGTTTCGAGAAATATACCCAGG
CCCTGCAGCGTGAGGGCTACTACGAGTACTTGTACCGAACTCGGTCGGCC
ATTGCCCGGGAGCAGAGGAGGA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig8916:1826..5247+ >mRNA_L-elsbetiae_contig8916.17937.1 ID=mRNA_L-elsbetiae_contig8916.17937.1|Name=mRNA_L-elsbetiae_contig8916.17937.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3990bp|location=Sequence derived from alignment at L-elsbetiae_contig8916:1826..5247+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCGAGATAACACAGGAAAGCTCGATCCCGGCGCGAGCTTGCACGCAGT
TTCGATCTCATCGAGGTTGCCTCGCACGGCCGGGTCGATGGCATCACCGC
GGGGGGTCAACATGGTTCAGCGGAGCCAGAGGTGGCACAGCAACAGTGGC
AAAAACAAGAAAAATAACAGTAACAGCGTTGCCACCGCCACCACCACCAC
CACCACCAAGAACAATAGCGAGAACAATGGCAGCAACAGCAACCGCAACA
TTCAACTTGGCCAAAATATTTCTGGCAACGGCCACGAGGACACGGCCGCC
CCTCCACAAGGAGAAGACAATAGTACGCTGCCCAACAGTGCTTGGACGTG
TCAAAACGACCCCAGCAATGGAAATGGCAACGATAAACACGAGAGGGCAG
CAGTGGGTGACATCTCAGCCTCCACACAGCTGAACATCAAGAGGAGGCGC
GCTAGGAGTTTCACCAGCACCACCGTCTTCGTGCGGTCGAGGCAGTGGGG
AATGCGACGTCCAAACAGGACAGAATCCTTTCGTAGAGCGGCTACCGAGG
ATGACATGCTCAGTGTTCATCAACTGGCCGTTTCGGGAGATGCGAGATAA
CACAGGAAAGCTCGATCCCGGCGCGAGCTTGCACGCAGTTTCGATCTCAT
CGAGGTTGCCTCGCACGGCCGGGTCGATGGCATCACCGCGGGGGGTCAAC
ATGGTTCAGCGGAGCCAGAGGTGGCACAGCAACAGTGGCAAAAACAAGAA
AAATAACAGTAACAGCGTTGCCACCGCCACCACCACCACCACCACCAAGA
ACAATAGCGAGAACAATGGCAGCAACAGCAACCGCAACATTCAACTTGGC
CAAAATATTTCTGGCAACGGCCACGAGGACACGGCCGCCCCTCCACAAGG
AGAAGACAATAGTACGCTGCCCAACAGTGCTTGGACGTGTCAAAACGACC
CCAGCAATGGAAATGGCAACGATAAACACGAGAGGGCAGCAGTGGGTGAC
ATCTCAGCCTCCACACAGCTGAACATCAAGAGGAGGCGCGCTAGGAGTTT
CACCAGCACCACCGTCTTCGTGCGGTCGAGGCAGTGGGGAATGCGACGTC
CAAACAGGACAGAATCCTTTCGTAGAGCGGCTACCGAGGATGACATGCTC
AGTGTTCATCAACTGGCCGTTTCGGGAGAGCTTCAGGATGCACACATGTC
AGCAGATATCGAGTGTGTGCAAACTGAGAGCACTGTGGGTACAACTTCTA
GAGCTTCAGGATGCACACATGTCAGCAGATATCGAGTGTGTGCAAACTGA
GAGCACTGTGGGTACAACTTCTAGGCAACGCCTGTTGGCAAACGCTTCGC
CACCCGGCGGCACTAAACACGAAAGCAGCCGTGGTGCATGGCCGCGACCA
GCCTCGGCTGGCCTCCTGTACTTTCGAGCGCATTTGAACCGCAGCGGTGA
AAGAGTAGTGGTTGCTCCGTGGGAGAGACGAGATGGGCATATTGTAGCAC
ACACAAGCGCCGCAAAACCTGGTTTGCTGTTTCAAGGAGACAGGAACGCG
GGGCCGGAGTCAATACCACAGGCGGGTGGCACTACACCGAACACGGTCGG
CGCGGTGGGGGAAATACCGGGGCAGTTGACAGAGCCCCTGATGGTGACAG
CGGCAAGAGGACGCACGCGAAGTCGTGCAAGGGGCTTCGGTGATATATCA
TCATCGGCAGCGGTGACCGGGGCGGAAGAGTGGGCACATGATTCAACGAA
TCCAATCACAACAGCGAGGACGACCTTGGACTGGAAGCCACCCTTCTCGC
CGGTCGTCCTTCCCTCGGATATTCTCTCTTCTCCGAGGATCGAACACGGG
ACCCGAGAAAATACAGATATCGTCACCTTGCGAGTAAAAGAAGCCGAGAG
TGACCCCAGGATAGAGGATTCCAGACCTTCATCTGGGCAAAAAACGAAGC
AGCTCCCAGCAGAAGCAGAAGCGGCAACAGTAGCCACAAACCCAGAAAAC
TACTCGCTTTTAACTTGTCGAGAAGATGGCCTGCCGGTCGGTTCTTGCAA
GGTCGAGACAACAACAGCGGCACAAGCGGCGTTGGGAACTTGCAAAGAAG
TCAAATACGTCCATCATCATGTGTCGACGCTAGAGATGATCTCTGCCATG
GCGCACGCCACGCCATCGGCGCCGCCAGAGTGCGTTCAAGGCGTCGAGAT
CGCGATCCCGACGAAAAAGCGACGGCCCGCATCGTCATCGCCTCGTCGCA
TTCGGACTGCGGCCGGCATTGATCACCGTGCTACCGATGGTGATGGTCGC
CACGGCCAGGAGACACCGTCACTTCCTTCCTTGCATAAACAAGAGGAGAG
TATCTGGGAGACCGAAGAAGCGACCCAACGTGCTGCGGCGCCTTCCAGCT
TGTTGCTCAAGTCCTTCTCCTGGACCGGAGGAGATGAGCTAGTAGATTCG
GCTGGCAGACGCCGGGGAATTCCCTTGCAACTGCAATCCGAGCAGGCGCA
AGGCGGACGTGGTGACGATCCGCAGGAATCATCCTGGGCCGAAGATCGGC
AGCTGCTATATGGCGTTTCGAGAAATATACCCAGGCCCTGCAGCGTGAGG
GCTACTACGAGTACTTGTACCGAACTCGGTCGGCCATTGCCCGGGAGCAG
AGGAGGAGCAACGCCTGTTGGCAAACGCTTCGCCACCCGGCGGCACTAAA
CACGAAAGCAGCCGTGGTGCATGGCCGCGACCAGCCTCGGCTGGCCTCCT
GTACTTTCGAGCGCATTTGAACCGCAGCGGTGAAAGAGTAGTGGTTGCTC
CGTGGGAGAGACGAGATGGGCATATTGTAGCACACACAAGCGCCGCAAAA
CCTGGTTTGCTGTTTCAAGGAGACAGGAACGCGGGGCCGGAGTCAATACC
ACAGGCGGGTGGCACTACACCGAACACGGTCGGCGCGGTGGGGGAAATAC
CGGGGCAGTTGACAGAGCCCCTGATGGTGACAGCGGCAAGAGGACGCACG
CGAAGTCGTGCAAGGGGCTTCGGTGATATATCATCATCGGCAGCGGTGAC
CGGGGCGGAAGAGTGGGCACATGATTCAACGAATCCAATCACAACAGCGA
GGACGACCTTGGACTGGAAGCCACCCTTCTCGCCGGTCGTCCTTCCCTCG
GATATTCTCTCTTCTCCGAGGATCGAACACGGGACCCGAGAAAATACAGA
TATCGTCACCTTGCGAGTAAAAGAAGCCGAGAGTGACCCCAGGATAGAGG
ATTCCAGACCTTCATCTGGGCAAAAAACGAAGCAGCTCCCAGCAGAAGCA
GAAGCGGCAACAGTAGCCACAAACCCAGAAAACTACTCGCTTTTAACTTG
TCGAGAAGATGGCCTGCCGGTCGGTTCTTGCAAGGTCGAGACAACAACAG
CGGCACAAGCGGCGTTGGGAACTTGCAAAGAAGTCAAATACGTCCATCAT
CATGTGTCGACGCTAGAGATGATCTCTGCCATGGCGCACGCCACGCCATC
GGCGCCGCCAGAGTGCGTTCAAGGCGTCGAGATCGCGATCCCGACGAAAA
AGCGACGGCCCGCATCGTCATCGCCTCGTCGCATTCGGACTGCGGCCGGC
ATTGATCACCGTGCTACCGATGGTGATGGTCGCCACGGCCAGGAGACACC
GTCACTTCCTTCCTTGCATAAACAAGAGGAGAGTATCTGGGAGACCGAAG
AAGCGACCCAACGTGCTGCGGCGCCTTCCAGCTTGTTGCTCAAGTCCTTC
TCCTGGACCGGAGGAGATGAGCTAGTAGATTCGGCTGGCAGACGCCGGGG
AATTCCCTTGCAACTGCAATCCGAGCAGGCGCAAGGCGGACGTGGTGACG
ATCCGCAGGAATCATCCTGGGCCGAAGATCGGCAGCTGCTATATGGCGTT
TCGAGAAATATACCCAGGCCCTGCAGCGTGAGGGCTACTACGAGTACTTG
TACCGAACTCGGTCGGCCATTGCCCGGGAGCAGAGGAGGA back to top
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