mRNA_L-elsbetiae_contig8907.17931.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8907.17931.1
Unique NamemRNA_L-elsbetiae_contig8907.17931.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig8907.17931.1 vs. uniprot
Match: D8LRQ5_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ5_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 1.270e-71
Identity = 128/134 (95.52%), Postives = 131/134 (97.76%), Query Frame = 1 
Query:   10 SLIILVQVVCSCLRHLRYPRSRLLALNLLVAFGRCCDDEARLQRLVPYTMTMLEDPVPVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQRLPSDSSDLVRIAFAESLASLAETSRRFLETAYAMRRAA 411
            SLIILVQVVCSCLRHLRYPRSRLL LNLLVAFGRCCDDEARLQRLVPYTMTML+D  PVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQR+PSDSSDLVRIAFAESLASLAETSRRFLETA+AMRRAA
Sbjct:   78 SLIILVQVVCSCLRHLRYPRSRLLGLNLLVAFGRCCDDEARLQRLVPYTMTMLDDTAPVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQRVPSDSSDLVRIAFAESLASLAETSRRFLETAFAMRRAA 211
[Close]
BLAST of mRNA_L-elsbetiae_contig8907.17931.1 vs. uniprot
Match: A0A6H5JSX2_9PHAE (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX2_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 1.570e-68
Identity = 129/150 (86.00%), Postives = 131/150 (87.33%), Query Frame = 1 
Query:   10 SLIILVQVVCSCLRHLRYPRSRLLALNLLVAFGRCCDDEARLQRLVPYTMTMLEDPVPVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQ----------------RLPSDSSDLVRIAFAESLASLAETSRRFLETAYAMRRAA 411
            SLIILVQVVCSCLRHLRYPRSRLL LNLLVAFGRCCDDEARLQRLVPYTMTML+D  PVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQ                R+PSDSSDLVRIAFAESLASLAETSRRFLETAYAMRRAA
Sbjct:  246 SLIILVQVVCSCLRHLRYPRSRLLGLNLLVAFGRCCDDEARLQRLVPYTMTMLDDTAPVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQVLTAPLREVFFGWLVERVPSDSSDLVRIAFAESLASLAETSRRFLETAYAMRRAA 395
[Close]
BLAST of mRNA_L-elsbetiae_contig8907.17931.1 vs. uniprot
Match: A0A0P1AGI3_PLAHL (Non-specific serine/threonine protein kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGI3_PLAHL)

HSP 1 Score: 134 bits (336), Expect = 2.060e-32
Identity = 66/135 (48.89%), Postives = 96/135 (71.11%), Query Frame = 1 
Query:    1 DSGSLIILVQVVCSCLRHLRYPRSRLLALNLLVAFGRCCDDEARLQRLVPYTMTMLEDPVPVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQRLPSDSSDLVRIAFAESLASLAETSRRFLETAYAMRR 405
            D   ++I++ ++CS LRH++ P S+L AL L+ A G+   DEARLQRL+PY + +++DP   VRA A+R++  LL +V SFP +D+++F  Y+ PA+    SD  +LVRI FAE L  LAETSRRFLE A+AM++
Sbjct:  605 DRNGIVIVLSLICSSLRHVQVPESKLTALYLIRALGQYTSDEARLQRLIPYLLEVIDDPSATVRALALRTITYLLSLVKSFPLADASVFPQYVLPAMVPFQSDPDELVRITFAECLPQLAETSRRFLELAHAMKQ 739
[Close]
BLAST of mRNA_L-elsbetiae_contig8907.17931.1 vs. uniprot
Match: A0A3F2RM04_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RM04_9STRA)

HSP 1 Score: 133 bits (334), Expect = 3.720e-32
Identity = 65/135 (48.15%), Postives = 96/135 (71.11%), Query Frame = 1 
Query:    1 DSGSLIILVQVVCSCLRHLRYPRSRLLALNLLVAFGRCCDDEARLQRLVPYTMTMLEDPVPVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQRLPSDSSDLVRIAFAESLASLAETSRRFLETAYAMRR 405
            D   ++I++ ++CS LRH++ P S+L AL L+ + G+   DEARLQRL+PY + +++DP   VRA A+R++  LL +V SFP +D+++F  Y+ PA+    SD  +LVRI FAE L  LAETSRRFLE A+AM++
Sbjct:  581 DRNGIVIILSLICSSLRHVQVPESKLTALYLIRSLGQFTSDEARLQRLIPYLLEVIDDPSATVRALALRTITYLLSLVESFPLADASVFPQYVLPAMVPFQSDPDELVRITFAECLPQLAETSRRFLEIAHAMKQ 715
[Close]
BLAST of mRNA_L-elsbetiae_contig8907.17931.1 vs. uniprot
Match: A0A484DWH5_BRELC (Non-specific serine/threonine protein kinase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DWH5_BRELC)

HSP 1 Score: 132 bits (332), Expect = 7.070e-32
Identity = 65/135 (48.15%), Postives = 95/135 (70.37%), Query Frame = 1 
Query:    1 DSGSLIILVQVVCSCLRHLRYPRSRLLALNLLVAFGRCCDDEARLQRLVPYTMTMLEDPVPVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQRLPSDSSDLVRIAFAESLASLAETSRRFLETAYAMRR 405
            D   ++I++ ++CS LRH++ P S+L AL L+ A G+   DEARLQRL+PY + +++DP   VRA A+R++  LL +V  FP +D+++F  Y+ PA+    SD  +LVRI FAE L  LAETSRRFLE A+AM++
Sbjct:  598 DRNGIVIVLSLICSSLRHVQVPESKLTALYLIRALGQFTSDEARLQRLIPYLLEVIDDPSAAVRALALRTIAFLLSLVEQFPLADASVFPQYVLPAMVPFQSDPDELVRITFAECLPQLAETSRRFLEIAHAMKQ 732
[Close]
BLAST of mRNA_L-elsbetiae_contig8907.17931.1 vs. uniprot
Match: A0A662WUP7_9STRA (Non-specific serine/threonine protein kinase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUP7_9STRA)

HSP 1 Score: 132 bits (331), Expect = 9.640e-32
Identity = 65/135 (48.15%), Postives = 95/135 (70.37%), Query Frame = 1 
Query:    1 DSGSLIILVQVVCSCLRHLRYPRSRLLALNLLVAFGRCCDDEARLQRLVPYTMTMLEDPVPVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQRLPSDSSDLVRIAFAESLASLAETSRRFLETAYAMRR 405
            D   ++I++ ++CS LRH++ P S+L AL L+ A G+   DEARLQRL+PY + +++DP   VRA A+R++  LL +V SFP +D+++F  Y+ PA+    SD  +LVRI FAE L  LA TSRRFLE A+AM++
Sbjct:  609 DRNGIVIILSLICSSLRHVQVPESKLTALYLIRALGQFTSDEARLQRLIPYLLEVIDDPSATVRALALRTITFLLSLVESFPLADASVFPQYVLPAMVPFQSDPDELVRITFAECLPQLAATSRRFLEIAHAMKQ 743
[Close]
BLAST of mRNA_L-elsbetiae_contig8907.17931.1 vs. uniprot
Match: A0A3M6VE65_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VE65_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.300e-31
Identity = 64/135 (47.41%), Postives = 96/135 (71.11%), Query Frame = 1 
Query:    1 DSGSLIILVQVVCSCLRHLRYPRSRLLALNLLVAFGRCCDDEARLQRLVPYTMTMLEDPVPVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQRLPSDSSDLVRIAFAESLASLAETSRRFLETAYAMRR 405
            D   ++I++ ++CS LRH++ P S+L +L L+ + G+   DEARLQRL+PY + +++DP   VRA A+R++  LL +V SFP +D+++F  Y+ PA+    SD  +LVRI FAE L  LAETSRRFLE A+AM++
Sbjct:  440 DRNGIVIILSLICSSLRHVQVPESKLTSLYLVRSLGQFTSDEARLQRLIPYLLEVIDDPSAAVRALALRTITFLLSLVASFPLADASVFPQYVLPAMIPFQSDPDELVRITFAECLPQLAETSRRFLEIAHAMKQ 574
[Close]
BLAST of mRNA_L-elsbetiae_contig8907.17931.1 vs. uniprot
Match: A0A6A5AKC0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AKC0_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.730e-31
Identity = 65/135 (48.15%), Postives = 90/135 (66.67%), Query Frame = 1 
Query:    7 GSLIILVQVVCSCLRHLRYPRSRLLALNLLVAFGRCCDDEARLQRLVPYTMTMLEDPVPVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQRLPSDSSDLVRIAFAESLASLAETSRRFLETAYAMRRAA 411
              ++I++ ++CS LRH + P+S+L  L L+   G   DDE RLQRL+PY M +L+D    VRA A+R + +L+ +VT  P SD+ +F  YI PALQ  P D  + VRIAFAE L  LAETSRRFLE + A+++ A
Sbjct:   29 NGIMIVLSLLCSSLRHCQVPQSKLTGLQLISRLGAHADDEVRLQRLIPYVMEVLDDANAAVRAAAIRCITSLVSVVTVLPLSDAAVFPQYILPALQNFPVDVEESVRIAFAECLPLLAETSRRFLEISCALKQRA 163
[Close]
BLAST of mRNA_L-elsbetiae_contig8907.17931.1 vs. uniprot
Match: A0A067CH76_SAPPC (Non-specific serine/threonine protein kinase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CH76_SAPPC)

HSP 1 Score: 130 bits (326), Expect = 4.300e-31
Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 1 
Query:    1 DSGSLIILVQVVCSCLRHLRYPRSRLLALNLLVAFGRCCDDEARLQRLVPYTMTMLEDPVPVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQRLPSDSSDLVRIAFAESLASLAETSRRFLETAYAMRRAA 411
            D+G +IIL  ++CS +RH   P+S+L AL L+   G   DDE RLQRLVP+ M +L+D    VRA A+R + +LL +V  FP SD+ IF  YI PALQ  PSD+ ++VRIAFAE L SLAE++RRFLE +  ++  A
Sbjct:  180 DNGIMIIL-SLLCSSVRHCGVPQSKLTALQLITRLGAFADDEVRLQRLVPFVMEVLDDACAAVRAEAIRCVSSLLSLVKIFPLSDAAIFPQYILPALQHFPSDAEEMVRIAFAECLPSLAESARRFLEISCTLKMRA 315
[Close]
BLAST of mRNA_L-elsbetiae_contig8907.17931.1 vs. uniprot
Match: A0A6A3T4I0_9STRA (Non-specific serine/threonine protein kinase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3T4I0_9STRA)

HSP 1 Score: 130 bits (326), Expect = 4.490e-31
Identity = 64/135 (47.41%), Postives = 95/135 (70.37%), Query Frame = 1 
Query:    1 DSGSLIILVQVVCSCLRHLRYPRSRLLALNLLVAFGRCCDDEARLQRLVPYTMTMLEDPVPVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQRLPSDSSDLVRIAFAESLASLAETSRRFLETAYAMRR 405
            D   ++I++ ++CS LRH++ P S+L AL L+ + G+   DEARLQRL+PY + +++D    VRA A+R++  LL +V SFP +D+++F  Y+ PA+    SD  +LVRI FAE L  LAETSRRFLE A+AM++
Sbjct:  601 DRNGIVIILSLICSSLRHVQVPESKLTALYLIRSLGQFTSDEARLQRLIPYLLEVIDDASATVRALALRTITYLLSLVESFPLADASVFPQYVLPAMVPFQSDPDELVRITFAECLPQLAETSRRFLEIAHAMKQ 735
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8907.17931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRQ5_ECTSI1.270e-7195.52Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6H5JSX2_9PHAE1.570e-6886.00Non-specific serine/threonine protein kinase n=1 T... [more]
A0A0P1AGI3_PLAHL2.060e-3248.89Non-specific serine/threonine protein kinase n=1 T... [more]
A0A3F2RM04_9STRA3.720e-3248.15Non-specific serine/threonine protein kinase n=1 T... [more]
A0A484DWH5_BRELC7.070e-3248.15Non-specific serine/threonine protein kinase n=1 T... [more]
A0A662WUP7_9STRA9.640e-3248.15Non-specific serine/threonine protein kinase n=2 T... [more]
A0A3M6VE65_9STRA1.300e-3147.41Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6A5AKC0_9STRA1.730e-3148.15Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A067CH76_SAPPC4.300e-3151.09Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6A3T4I0_9STRA4.490e-3147.41Non-specific serine/threonine protein kinase n=4 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8907contigL-elsbetiae_contig8907:4511..7467 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score245.4
Seed ortholog evalue2.5e-62
Seed eggNOG ortholog2880.D8LRQ5
KEGG koko:K08333
KEGG Pathwayko04136,ko04138,ko04140,ko04371,map04136,map04138,map04140,map04371
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0005768,GO:0005770,GO:0005942,GO:0006464,GO:0006468,GO:0006605,GO:0006623,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006914,GO:0007034,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016236,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0019898,GO:0030242,GO:0031410,GO:0031967,GO:0031975,GO:0031982,GO:0032507,GO:0032991,GO:0033036,GO:0033365,GO:0034067,GO:0034271,GO:0034272,GO:0034613,GO:0035032,GO:0036211,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044232,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045053,GO:0045184,GO:0045185,GO:0045324,GO:0046907,GO:0051179,GO:0051234,GO:0051235,GO:0051641,GO:0051649,GO:0051651,GO:0061695,GO:0061919,GO:0065007,GO:0065008,GO:0070727,GO:0071561,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072665,GO:0072666,GO:0097708,GO:0098796,GO:0140096,GO:1901564,GO:1902494,GO:1990234
EggNOG free text desc.autophagy of peroxisome
EggNOG OGsKOG1240@1,KOG1240@2759
EC2.7.11.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Exons4
Model size654
Cds size651
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8907.17931.1prot_L-elsbetiae_contig8907.17931.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8907 4511..7465 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816967.5078905-CDS-L-elsbetiae_contig8907:4510..46601622816967.5078905-CDS-L-elsbetiae_contig8907:4510..4660Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8907 4511..4660 +
1691683948.4625552-CDS-L-elsbetiae_contig8907:4510..46601691683948.4625552-CDS-L-elsbetiae_contig8907:4510..4660Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8907 4511..4660 +
1622816967.518905-CDS-L-elsbetiae_contig8907:6018..61621622816967.518905-CDS-L-elsbetiae_contig8907:6018..6162Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8907 6019..6162 +
1691683948.4786487-CDS-L-elsbetiae_contig8907:6018..61621691683948.4786487-CDS-L-elsbetiae_contig8907:6018..6162Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8907 6019..6162 +
1622816967.5304387-CDS-L-elsbetiae_contig8907:6663..68881622816967.5304387-CDS-L-elsbetiae_contig8907:6663..6888Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8907 6664..6888 +
1691683948.4885693-CDS-L-elsbetiae_contig8907:6663..68881691683948.4885693-CDS-L-elsbetiae_contig8907:6663..6888Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8907 6664..6888 +
1622816967.545253-CDS-L-elsbetiae_contig8907:7333..74651622816967.545253-CDS-L-elsbetiae_contig8907:7333..7465Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8907 7334..7465 +
1691683948.5008845-CDS-L-elsbetiae_contig8907:7333..74651691683948.5008845-CDS-L-elsbetiae_contig8907:7333..7465Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8907 7334..7465 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8907.17931.1

>prot_L-elsbetiae_contig8907.17931.1 ID=prot_L-elsbetiae_contig8907.17931.1|Name=mRNA_L-elsbetiae_contig8907.17931.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=217bp
DSGSLIILVQVVCSCLRHLRYPRSRLLALNLLVAFGRCCDDEARLQRLVP
YTMTMLEDPVPVVRATAVRSLRALLGMVTSFPPSDSNIFLLYIFPALQRL
PSDSSDLVRIAFAESLASLAETSRRFLETAYAMRRAAAASTAAAAASAAA
SAAAAAAAAESPSAPASGTGRQQEPPATASSTGNDDDCDDDDANSKSRDR
LQEAPSNGAAGEGSSSS
back to top

mRNA from alignment at L-elsbetiae_contig8907:4511..7467+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8907.17931.1 ID=mRNA_L-elsbetiae_contig8907.17931.1|Name=mRNA_L-elsbetiae_contig8907.17931.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2957bp|location=Sequence derived from alignment at L-elsbetiae_contig8907:4511..7467+ (Laminarionema elsbetiae ELsaHSoW15)
GACAGCGGATCTTTGATCATCCTGGTGCAGGTGGTGTGCTCGTGCCTGCG
GCATCTGCGGTACCCCCGGAGCCGGCTGCTGGCGCTGAACCTCCTCGTGG
CGTTCGGGCGGTGTTGCGACGACGAGGCGAGGCTGCAGCGCCTGGTGCCG
GTGAGCAGGGAGGAGAGTGTGCGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGCGATGGGCTGGGGGTCGATCCGTGTGGTTTGAT
GTGATGCGATGTTGTGTGATGTGGTGTGGTGCGTGGTGTCTGCAGGTGTG
GTGCTGACTGACGGCCGACGGACAGGACGCGGCGGTAGGCCACCTGCTGT
TTCCTGGTAGACTGACTGGCTGCGCCCCCTCTGGCCGTGCGCACCCCATC
TCCTCTCCGCAAAGCCTGTCGGGCGGCAGGAGCACGCGTACAAATGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTCCTTCCCGTTTATTTTGGCGACAGT
CCCCCCAAGTGGAGACGTGTATGTACTACACCTTGCGGTGTACTTGGAGG
TACTACACTCTATGCAGTGCGTTTGTCTGTGCAACTAGAACCAACCGGGG
TCACACAGGAGGAGGTGAACACTGGGGCTTTTTTTTTTTTTTTACATATG
ATACATGTGAACTGGGGTTAGGTCAGGGGGCCCCGGGTGCGGCAGGAGGG
GGGTAATGAGGGCTTTTTTGTGTTTTGTGGTTCTCCCAGCGAACGGCCAC
GAGACGAGGCGCGTGCTTCGCTCGACCGCGGCTCAGCCGGAAGCTGCGAG
TCGGTCGCATCTCAATGTCGGACGATGCAATCCAACGAGAGGAATGGTGA
TGTGTTAACGTGTTTACCGTAGGTGCCACAAGATACCACACCCCCTGGGT
AGATCTTCAAAGCTCGATTACTCCCCGGCAAGAGAGTGTCAGTGCCGAAA
GGGGGTGGCGGTGGAACGATCTACTTGAGGGCTGTCTTAAAGTGTGTCGT
TTGGGGTGCTGGCACCCTCTTCGTTGCGGAGTAATGAGCTCTAAAACTCG
GTCAGGGGGGGGAGGGGGTTGGTATCTTGTGTCGCCTACGGTACCCGCAA
CCATCCTTGGCGCGTTACGTGCTGACCGTGGCGTTCCAGCATGCCACTGG
TGCCGTCGACATTTACAATGCTTGTAGGTCTCGCCACCATCTGGCGTTTT
TATCGACCCCACGTCCATCGTTTGCTTGTGGTATGCTTTTGTGTTTCCCG
AACAGCACTACGTCTGTAGTGTTTGTTCGCGAAACGCCATCGGCGACAGC
ATTCTTTGCAGGTTTCCCTTGAAAGCGAGAGCTATATACGATTGCGATTG
TTTACGACAACCATTCGTGGCTGTGAAATTTTACGGTCATAATGTGTCGC
CGCCGCCGCCGCCGCCGCCGCCACCGCCACCGCCACCGCCCTCGCTTTTG
TTGCCCAGTACACGATGACCATGCTGGAGGATCCCGTGCCAGTGGTGAGA
GCAACGGCGGTGCGATCCCTCCGCGCTTTGCTGGGCATGGTCACGTCCTT
CCCGCCGAGCGACTCCAACATATTCCTGCTCTACATCTTCCCCGCGCTCC
AGGTAAATAATGCGAGGATAGTGCCTTTCTTGAATGTGACCAAAACCGAT
GACACTCGAACATGTACGCTATCGTTGAAATCGGCAAGCAGACCAGGCCC
ACCAGCCCAGGGGATCGCCGCCACAGAACCCGGCGTGGTCGATGTTCTGG
GCTGAGCTTGCAGGCTGTGCAGAGCGTTTCGTCTACCAGGTGGCGCGCGC
GGACTCTTGCTCCGACACGCCGTAGCTGGCGTGTGCGCCATCCTGCATTG
CGGCGTCCGTCCATCCGGCACCTTCGTCCTGGACCCTTGAAAATTGTTAC
TTGGTTCGTTTTCTTTTCTTGTGCATAACGTGCGCTCTCCGGGTTTTTGT
AGGGTCAACGGTGGTTGTTCGAACCCCCCCCCCCCCCGTTTGTGCCGTTC
GCGTCTGTCGTCCTTGCGGTTCGTTTCGTTTCTTTCGGTTTCATTTTTCG
GTTTCATTTTTTCGGTTTCATTCGACGTGCCGTGCGTGAATATGAAATAC
CAGCGCTTGCCGTCGGATTCGTCGGACCTGGTGCGCATCGCCTTCGCCGA
GAGCCTGGCGTCGCTGGCGGAGACCAGCAGGAGGTTCTTGGAGACGGCGT
ACGCCATGCGCCGGGCTGCCGCAGCCTCTACCGCCGCTGCTGCCGCCTCT
GCCGCTGCCAGTGCGGCGGCGGCAGCGGCGGCGGCTGAGTCGCCGTCGGC
TCCCGCCTCGGGCACGGGCCGCCAGCAGGTTTGTTTACGTGTATTTTTTG
TTTTATTGAATTTTCTTCGCATTGTTTTTCTGTTTTTTTTTGCTGCTACG
AACAGTAGCTGGCCGTTGTCTGTCCGCGGTGCGGGATGGTTCGCCTTGTG
TGTTGTTGTTGCTCAAGCCTTTTTTTTGTTAAGGGGGGCGGTAGAATAGC
ACATGTTTATGTTTTTTTTTTGCTGTTGTTGCCAGAGGGAGGAGTTACAT
ACACGTCGGCCGTTTGGTGTGTCGAATGATGTTGCCGTGGATGGTTTTAC
TTTACCCCTTTACCTCAATGCTCGCACCTCACATGGCTTCCGTCAAAATC
GAAACCCCACGTCGCTGTTGCTCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCACACCAACCGCCCGCCGCACCGCCGC
CGCCACCCCCCCACACAACCAAGGAACCCCCGGCCACAGCTAGCAGCACC
GGAAACGACGACGACTGCGACGACGACGACGCCAACAGCAAAAGCCGCGA
CCGGCTGCAAGAGGCACCGTCCAATGGTGCAGCGGGCGAGGGCAGCAGTA
GCAGCGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig8907:4511..7467+

>mRNA_L-elsbetiae_contig8907.17931.1 ID=mRNA_L-elsbetiae_contig8907.17931.1|Name=mRNA_L-elsbetiae_contig8907.17931.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1302bp|location=Sequence derived from alignment at L-elsbetiae_contig8907:4511..7467+ (Laminarionema elsbetiae ELsaHSoW15)
GACAGCGGATCTTTGATCATCCTGGTGCAGGTGGTGTGCTCGTGCCTGCG
GCATCTGCGGTACCCCCGGAGCCGGCTGCTGGCGCTGAACCTCCTCGTGG
CGTTCGGGCGGTGTTGCGACGACGAGGCGAGGCTGCAGCGCCTGGTGCCG
GACAGCGGATCTTTGATCATCCTGGTGCAGGTGGTGTGCTCGTGCCTGCG
GCATCTGCGGTACCCCCGGAGCCGGCTGCTGGCGCTGAACCTCCTCGTGG
CGTTCGGGCGGTGTTGCGACGACGAGGCGAGGCTGCAGCGCCTGGTGCCG
TACACGATGACCATGCTGGAGGATCCCGTGCCAGTGGTGAGAGCAACGGC
GGTGCGATCCCTCCGCGCTTTGCTGGGCATGGTCACGTCCTTCCCGCCGA
GCGACTCCAACATATTCCTGCTCTACATCTTCCCCGCGCTCCAGTACACG
ATGACCATGCTGGAGGATCCCGTGCCAGTGGTGAGAGCAACGGCGGTGCG
ATCCCTCCGCGCTTTGCTGGGCATGGTCACGTCCTTCCCGCCGAGCGACT
CCAACATATTCCTGCTCTACATCTTCCCCGCGCTCCAGCGCTTGCCGTCG
GATTCGTCGGACCTGGTGCGCATCGCCTTCGCCGAGAGCCTGGCGTCGCT
GGCGGAGACCAGCAGGAGGTTCTTGGAGACGGCGTACGCCATGCGCCGGG
CTGCCGCAGCCTCTACCGCCGCTGCTGCCGCCTCTGCCGCTGCCAGTGCG
GCGGCGGCAGCGGCGGCGGCTGAGTCGCCGTCGGCTCCCGCCTCGGGCAC
GGGCCGCCAGCAGCGCTTGCCGTCGGATTCGTCGGACCTGGTGCGCATCG
CCTTCGCCGAGAGCCTGGCGTCGCTGGCGGAGACCAGCAGGAGGTTCTTG
GAGACGGCGTACGCCATGCGCCGGGCTGCCGCAGCCTCTACCGCCGCTGC
TGCCGCCTCTGCCGCTGCCAGTGCGGCGGCGGCAGCGGCGGCGGCTGAGT
CGCCGTCGGCTCCCGCCTCGGGCACGGGCCGCCAGCAGGAACCCCCGGCC
ACAGCTAGCAGCACCGGAAACGACGACGACTGCGACGACGACGACGCCAA
CAGCAAAAGCCGCGACCGGCTGCAAGAGGCACCGTCCAATGGTGCAGCGG
GCGAGGGCAGCAGTAGCAGCGAACCCCCGGCCACAGCTAGCAGCACCGGA
AACGACGACGACTGCGACGACGACGACGCCAACAGCAAAAGCCGCGACCG
GCTGCAAGAGGCACCGTCCAATGGTGCAGCGGGCGAGGGCAGCAGTAGCA
GC
back to top