mRNA_L-elsbetiae_contig89.17922.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig89.17922.1 vs. uniprot
Match: D7G3I7_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I7_ECTSI) HSP 1 Score: 1058 bits (2737), Expect = 0.000e+0 Identity = 766/1161 (65.98%), Postives = 822/1161 (70.80%), Query Frame = 1 Query: 1 LPHQLLAPSKLGEAQASIQAGGDGVRDGVAMLLTAISEYNDMQGADGVNGSQVLGAAMRRLTEDPYLTLGVEPVADEATIKKAYRKLALRYHPDKNKATSTLFQAVQGAHDVLIEPDKRAEYDVKRKRQQEALNRLRKHPKGPAAGTP-NSTGAATTGAPKSGQPSGAAASPTGGGGTKQASSPHAGTGGNRGATGSTXXXXXXXXXXXXXXXXXXXXXASSTGGEPAAASGDEKVRQFNKRFYEEFRREAQKHDKSKASNRRASGTAPGTSKHQPPPRPKMRSTNRTDCTVTLEWHCSGLPSTTAFELQWRQRGRSASDWVTSPTLVVGMSCRKKNLEPCTCYEFRVRAASAWGWSGHCDPVMVVTLPSAAXXXXXXXXXXXXXENASTSP-RQKVSGFQSDGIGGSTTAAEKAKAQVEEARRRRSQNQAGHTKPSVQFQSSSIAGNDGAEGVQDATSRGKKESPATNATAGGQRNAXXXXXXXXXGAGGAPPGMEKTNSWYWRRMSRAAAQDGKDXXXGSTADGTGKEKAQRRRTMHEQGSPSEGAWACVVCKRQNEPTSNSCWVCYTARSYKPVNLDRIRTDNESPA---------GSPLNSARRSSIGSRSRS--TTPPEGAT----KTNTQGGNNVFPILASAVEFSSALSCDAGAGVSEKVASIRVYSVPSQGGPGSGRGAGDTDGIRVSASRVQPASDSA--AAAGEGAAKDPADVWEFTEGDLDNIGGGATTYGSDDEWSYASGAGGLDTKSDPGDADRYRRRSSTGGVKQRRGSSQTGASAAGRGRPGGDDXXXXXXXXDAPPKRYLNGRITKLHNVRAEPIRDAKVVGYLLATKEVQVLAEVGDWFKVRWHKRAKDKPQQEAPSXXXXXXXXXXXXXXXXXXXXGPGASEXXXXXXXXXXXXXXXXXXXXXXXXXXGSGPEDGSEAAEVDGMEEASEGGREKGTGWCVTRDKKHQFIVTIGPEDADSGGNRRPSSAKXXXXXXXXXXXRSSVTAGRVSGGLDGSGSSPAAGAEGPASTGDAGVFGEDGEEGECWHELKDEDGSVYYFNAASGMSQWEPPLWLDEIDPTTXXXXXXXXXXXXXXXXRPEDFVPIVRENPYATTPEQDFIKSVLSPKRSKGPKSFHEAIYKAARAGGSAQHLNTVSEGVSGGG 3426 L QLLA SKL AQASIQ+G DGVR+GVAMLLTAISEY Q + GVNGSQVLGAAMRRLTEDPYLTLGV+P ADE TIKKAYRKLALRYHPDKNKATSTLFQAVQGAHD+LIEP+KRAEYDVKRKRQQEALNRLRKHPKG AAGTP N+ GAA+ G + QP+ XXXXXXXXXXXXXXXXXXXXX +S GEPAAASGDEKVRQFNKRFYEEFRREAQK DKSKA A GTSKHQPP RPKMRSTNRT+ TVTLEWHC+GLPSTTAFELQWRQRGR+AS+WVTSPTLVVG SCRKKNL PCTCYEFRVRAASAWGWSG+CDPVMVVTLPS XXXXXXXXXE+ASTSP RQKVSGFQSDGIGGS AAEKAKAQVEEAR RRSQ QAGH KPSVQF+SSSIAG T G XXXXXXXXX XXX RRRTMH QG+PSEGAW CVVCKR NEPTSNSCWVCYT RSY+PVNLDRIRT+NE+P G+PL S RR+SIGSR RS TTP EG T T +GG+N A+A + D+G VSEKV SIRVYSVP+Q P DGIRVSAS P+S +A AAAGE KDPADVWEFTEGDLDN+GGGATTYGSDDEWSYASG GGLDTKSDPGDADRYRR XXXXXXXX A PKRYLNGRITKLHNVRAEPIR+AKVVGYL+ATKEV+VLAEVGDW+KVRWHKRAK+K +Q+ PSXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX E + ++ASE +EKGTGWCVTRDKKHQ+IVT+G E+ D RRPS XXXXXXXXXXX VFGE +EGECWHELKDEDGSVYYFNA SGMSQWEPP+WLDEIDPTTXXXXXXXXXXXXXXXXRPE+F+PIVRENPYATTPEQDFIKSVLSPKRSKGPKSFHEA++KAA+ G SAQHLNTV+EGV+GGG Sbjct: 2 LQQQLLAASKLDAAQASIQSGEDGVREGVAMLLTAISEYECNQDSGGVNGSQVLGAAMRRLTEDPYLTLGVDPAADEGTIKKAYRKLALRYHPDKNKATSTLFQAVQGAHDILIEPNKRAEYDVKRKRQQEALNRLRKHPKGSAAGTPANNAGAASPGGAR--QPTXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSARGEPAAASGDEKVRQFNKRFYEEFRREAQKQDKSKAXXXXXXAAAAGTSKHQPPSRPKMRSTNRTESTVTLEWHCAGLPSTTAFELQWRQRGRTASEWVTSPTLVVGKSCRKKNLAPCTCYEFRVRAASAWGWSGYCDPVMVVTLPSTGGGGAXXXXXXXXXESASTSPPRQKVSGFQSDGIGGS--AAEKAKAQVEEARHRRSQTQAGHAKPSVQFRSSSIAG-----------------------TEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXRRRTMHAQGTPSEGAWVCVVCKRPNEPTSNSCWVCYTTRSYQPVNLDRIRTENETPGRREGSVGGGGNPLGSGRRASIGSRPRSPSTTPTEGNTGKQSPTAGKGGSNTTNNGAAATD-------DSGVRVSEKVPSIRVYSVPTQPEPAG-------DGIRVSASDANPSSGAAGNAAAGEEGTKDPADVWEFTEGDLDNVGGGATTYGSDDEWSYASGTGGLDTKSDPGDADRYRRXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXATPKRYLNGRITKLHNVRAEPIREAKVVGYLIATKEVEVLAEVGDWYKVRWHKRAKEKARQDPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------GEAEKPDDASEERKEKGTGWCVTRDKKHQYIVTVGAEETDPDATRRPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXVFGEAADEGECWHELKDEDGSVYYFNATSGMSQWEPPMWLDEIDPTTXXXXXXXXXXXXXXXXRPEEFIPIVRENPYATTPEQDFIKSVLSPKRSKGPKSFHEAMHKAAQTG-SAQHLNTVTEGVAGGG 1064
BLAST of mRNA_L-elsbetiae_contig89.17922.1 vs. uniprot
Match: A0A7S4EDW7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDW7_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.440e-28 Identity = 109/349 (31.23%), Postives = 154/349 (44.13%), Query Frame = 1 Query: 130 GADGVNGSQVLGAAMRRLTEDPYLTLGVEPVADEATIKKAYRKLALRYHPDKNK-ATSTLFQAVQGAHDVLIEPDKRAEYDVKRKRQQEALNRLRKHPKGPAAGTPNSTGAATTGAPKSGQPSGAAASPTGGGGTKQASSPHAGTGGNRGATGSTXXXXXXXXXXXXXXXXXXXXXASSTGGEPAAASGDEKVRQFNKRFYEEFRREAQKHDKSKASNRRA---SGTAP--GTSKHQ---------------PPPRPK-MRSTNRTDCTVTLEWHCS---GLPSTTAFELQWRQRGRSASDWVTSPTLVVGMSCRKKNLEPCTCYEFRVRAASAWGWSGHCDPVMVVTL 1101 G + VNG+ VL +++L EDPY LGV D + +KKAYRKLAL+YHPDKN T+ LF +Q A+ +L + KR YD++R R++ +LRK + G PS P ++++ P ++ R FN++FY E+++ + + A R SG P G S H P+P +R N+TD TVTLEW G + A+ELQWR+R W ++ L++ +CRK+NL+ T YEFRVRAAS GWS H D V TL Sbjct: 44 GVETVNGAPVLNRILKKLQEDPYRCLGVAKTCDSSEVKKAYRKLALQYHPDKNADRTTALFTEIQRAYTLLSDDKKRKSYDLRRARKEAQNEKLRKRXXXXXXXX------------REGSPSMGMRRPP----------------------------------------------STNSFHMPPQTEEEKTQRDFNRKFYSEYKQHMKPAPSTGAGTSRPPPPSGAPPSEGVSAHARGSAGASTSKNGAXXXXPKPTHLRVANKTDSTVTLEWRAGELRGAAVSKAYELQWRKRQGKDQGWQSASQLILHTTCRKRNLDKQTRYEFRVRAASVAGWSPHSDVCDVTTL 334
BLAST of mRNA_L-elsbetiae_contig89.17922.1 vs. uniprot
Match: A0A7S1TP40_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TP40_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.190e-21 Identity = 108/325 (33.23%), Postives = 144/325 (44.31%), Query Frame = 1 Query: 2386 YLNGRITKLHNVRAEPIRDAKVVGYLLATKEVQVLAEVGDWFKVRWHKRAKDKPQQEAPSXXXXXXXXXXXXXXXXXXXXGPGASEXXXXXXXXXXXXXXXXXXXXXXXXXXGSGPEDGSEAAEVDGMEEASEGGREKGTGWCVTRDKKHQFIVTIGPE------DADSGGNRRPSSAKXXXXXXXXXXXRSSVTAGRVSGGLDGSGSSPAAGAEGPASTGDAGVFGEDGEEGECWHELKDEDGSVYYFNAASGMSQWEPPLWLDEIDPTTXXXXXXXXXXXXXXXXRPEDFVPIVRENPYATTPEQDFIKSVLSPKRSKGPKSF 3342 +LN +TKLHNVRAEP++++ VVG+LL ++V AEVGDW KV+WH+ K QE S G GWC+ R+ + V GPE + D+ + +SA+ R G D G++ EGP+ E+ W+EL+D G +YYFN+++G+SQW+PP W DE D XXXXXXXXXXXXXXXX E F+P+VRE Y+T P DFIK VLSPKRS ++F Sbjct: 491 WLNAEVTKLHNVRAEPMKNSPVVGHLLTARQVIATAEVGDWVKVKWHR----KYSQEEKSIDVVTA------------------------------------------------------------------------GQGWCLRRNSE----VAAGPEYLIEVPEVDARKMAQTASARRMRDPNVLPKVR------EEKGDEDEDGTATDGDNEGPS------------EDQAVWYELRDSTGELYYFNSSTGISQWDPPPWFDETDXXXXXXXXXXXXXXXXXXXXXEGFIPVVREEVYST-PGADFIKDVLSPKRSFASRTF 716
BLAST of mRNA_L-elsbetiae_contig89.17922.1 vs. uniprot
Match: A0A7S2CLZ4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CLZ4_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 3.200e-18 Identity = 57/90 (63.33%), Postives = 74/90 (82.22%), Query Frame = 1 Query: 3076 HELKDEDGSVYYFNAASGMSQWEPPLWLDEIDPTTXXXXXXXXXXXXXXXXRPEDFVPIVRENPYATTPEQDFIKSVLSPKRSKGPKSFH 3345 +EL+DE G +YYFN+ +G+S W PP W+D +DP +XXXXXXXXXXXXXXX P DF+P+VRE Y+T PE F+KSVLSPKRS+GP++F+ Sbjct: 46 YELRDEAGDLYYFNSGTGVSDWNPPEWIDSVDPQSXXXXXXXXXXXXXXXEVPFDFIPVVREEAYST-PEAQFVKSVLSPKRSRGPRNFY 134
BLAST of mRNA_L-elsbetiae_contig89.17922.1 vs. uniprot
Match: A0A7S4DIU6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIU6_HETAK) HSP 1 Score: 77.8 bits (190), Expect = 2.260e-12 Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 1 Query: 223 ADEATIKKAYRKLALRYHPDKNKATSTLFQAVQGAHDVLIEPDKRAEYDVKRKRQQEALNR 405 AD A+IKKAYRKLAL+YHPDKN +T LFQ VQGA+D+L + DK+ YD +++ QQ+ + R Sbjct: 7 ADNASIKKAYRKLALKYHPDKNPSTPLLFQEVQGAYDLLSDEDKKERYDERKRAQQQVMGR 67
BLAST of mRNA_L-elsbetiae_contig89.17922.1 vs. uniprot
Match: A0A0M3JNU8_ANISI (J domain-containing protein n=1 Tax=Anisakis simplex TaxID=6269 RepID=A0A0M3JNU8_ANISI) HSP 1 Score: 69.7 bits (169), Expect = 1.120e-10 Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 1 Query: 196 YLTLGVEPVADEATIKKAYRKLALRYHPDKNKATSTLFQAVQGAHDVLIEPDKRAEYD 369 Y LGVEP A E+ +KKAYRKLAL+YHPDKN + F+A+ A++VL +P KR YD Sbjct: 8 YEILGVEPSATESELKKAYRKLALKYHPDKNPSEGERFKAISQAYEVLSDPKKRQIYD 65
BLAST of mRNA_L-elsbetiae_contig89.17922.1 vs. uniprot
Match: A0A835YK20_9STRA (DnaJ domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK20_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.210e-10 Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 1 Query: 190 DPYLTLGVEPVADEATIKKAYRKLALRYHPDKNKATSTLFQAVQGAH 330 DPYL+LGV A + IKKAYRKLAL+YHPDKN+ T++LFQA+Q A+ Sbjct: 1 DPYLSLGVPVDAPDNDIKKAYRKLALKYHPDKNRGTASLFQAIQAAN 47
BLAST of mRNA_L-elsbetiae_contig89.17922.1 vs. uniprot
Match: A0A4P9ZN18_9FUNG (DnaJ domain-containing protein (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZN18_9FUNG) HSP 1 Score: 68.2 bits (165), Expect = 1.740e-10 Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1 Query: 196 YLTLGVEPVADEATIKKAYRKLALRYHPDKNKATSTLFQAVQGAHDVLIEPDKRAEYD 369 Y TL V+P A IK+AYR+LALRYHPDKN +F+A+ A+DVL +P KR YD Sbjct: 2 YQTLNVDPDASPEEIKRAYRRLALRYHPDKNPEAEDMFRAITAAYDVLSDPYKRQVYD 59
BLAST of mRNA_L-elsbetiae_contig89.17922.1 vs. uniprot
Match: A0A8H4KF29_9HYPO (J domain-containing protein n=1 Tax=Fusarium albosuccineum TaxID=1237068 RepID=A0A8H4KF29_9HYPO) HSP 1 Score: 69.7 bits (169), Expect = 2.490e-10 Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 190 DPYLTLGVEPVADEATIKKAYRKLALRYHPDKN----KATSTLFQAVQGAHDVLIEPDKRAEYDVKRKR 384 D Y L + P AD A I+K YRKLAL+YHPD+N + +T FQ +Q AH+VL +P+++A+YD R R Sbjct: 6 DYYADLDLPPSADAAEIRKQYRKLALKYHPDRNPGREQEVNTQFQVIQSAHEVLSDPNQKAKYDASRAR 74
BLAST of mRNA_L-elsbetiae_contig89.17922.1 vs. uniprot
Match: A0A7V9WKE0_9ACTN (J domain-containing protein (Fragment) n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7V9WKE0_9ACTN) HSP 1 Score: 69.7 bits (169), Expect = 3.780e-10 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 1 Query: 181 LTEDPYLTLGVEPVADEATIKKAYRKLALRYHPDKNKATSTL---FQAVQGAHDVLIEPDKRAEYD 369 +T++PY LGV+ A + IKKAYRKLA +YHPDKN ++ F+A+Q AH +L +P KR EYD Sbjct: 3 VTKNPYDALGVDKKASDEEIKKAYRKLARQYHPDKNPGDASAEERFKAIQEAHSILSDPKKRREYD 68 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig89.17922.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig89.17922.1 >prot_L-elsbetiae_contig89.17922.1 ID=prot_L-elsbetiae_contig89.17922.1|Name=mRNA_L-elsbetiae_contig89.17922.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1125bp MLLTAISEYNDMQGADGVNGSQVLGAAMRRLTEDPYLTLGVEPVADEATIback to top mRNA from alignment at L-elsbetiae_contig89:17237..37008- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig89.17922.1 ID=mRNA_L-elsbetiae_contig89.17922.1|Name=mRNA_L-elsbetiae_contig89.17922.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=19772bp|location=Sequence derived from alignment at L-elsbetiae_contig89:17237..37008- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig89:17237..37008- >mRNA_L-elsbetiae_contig89.17922.1 ID=mRNA_L-elsbetiae_contig89.17922.1|Name=mRNA_L-elsbetiae_contig89.17922.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6750bp|location=Sequence derived from alignment at L-elsbetiae_contig89:17237..37008- (Laminarionema elsbetiae ELsaHSoW15)back to top |