mRNA_L-elsbetiae_contig8899.17918.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8899.17918.1 vs. uniprot
Match: A0A6H5JN16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN16_9PHAE) HSP 1 Score: 263 bits (672), Expect = 1.790e-85 Identity = 135/161 (83.85%), Postives = 146/161 (90.68%), Query Frame = 1 Query: 1 VPRRLGERELDRNPDRTHPEENAAIYTSRNILAETPETTVGENVHVKGELSFERLLRVDGSFKGKLISTGDLVIGATGVVRGNIEHLREVVSDGTVIGDIQAEKIRLRRSAIVIGNITCTSLSMDPDVSVSGKLNVHKEAPSRLHLEGEEEAPEDEVAGSS 483 VPRRLGERELDRNP R A RNILAETPETTVGENVHVKGELSF+RLLRVDGSFKG+L+STGDLVIGATG+VRGNIEHLREVVSDGTV+G+IQAE++RLRRSAIVIGNITC SLSMDPDVS+SGKLNVH +APSRLHLEGEEEAPEDE+A SS Sbjct: 36 VPRRLGERELDRNPGRIEEPATYATPAPRNILAETPETTVGENVHVKGELSFDRLLRVDGSFKGQLVSTGDLVIGATGIVRGNIEHLREVVSDGTVVGNIQAERVRLRRSAIVIGNITCYSLSMDPDVSISGKLNVHIQAPSRLHLEGEEEAPEDEMADSS 196
BLAST of mRNA_L-elsbetiae_contig8899.17918.1 vs. uniprot
Match: D7FI98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI98_ECTSI) HSP 1 Score: 202 bits (513), Expect = 2.250e-62 Identity = 101/117 (86.32%), Postives = 113/117 (96.58%), Query Frame = 1 Query: 139 KGELSFERLLRVDGSFKGKLISTGDLVIGATGVVRGNIEHLREVVSDGTVIGDIQAEKIRLRRSAIVIGNITCTSLSMDPDVSVSGKLNVHKEAPSRLHLEGEEEAPEDEVAGSSEN 489 +GELSF+RLLRVDGSFKG+L+STGDLVIGATGVVRGNI+HLREVVSDGTV+G+IQAE++RLRRSAIVIGNITC SLSMDPDVS+SGKLNVH +APSRLHL+GEEEAPEDEVA SS N Sbjct: 14 QGELSFDRLLRVDGSFKGQLVSTGDLVIGATGVVRGNIDHLREVVSDGTVVGNIQAERVRLRRSAIVIGNITCYSLSMDPDVSISGKLNVHIQAPSRLHLDGEEEAPEDEVADSSGN 130
BLAST of mRNA_L-elsbetiae_contig8899.17918.1 vs. uniprot
Match: A0A835YKE5_9STRA (Polymer-forming cytoskeletal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE5_9STRA) HSP 1 Score: 130 bits (327), Expect = 5.710e-35 Identity = 64/111 (57.66%), Postives = 81/111 (72.97%), Query Frame = 1 Query: 79 TSRNILAETPETTVGENVHVKGELSFERLLRVDGSFKGKLISTGDLVIGATGVVRGNIEHLREVVSDGTVIGDIQAEKIRLRRSAIVIGNITCTSLSMDPDVSVSGKLNVH 411 T + +ETPETT+GE V V GELSF+RLLR+DG F G+L+S GDLV+G TGV+ G++ + EV+ DG V+GDI +K+ LR A V GNITC SL +DP V V G LNVH Sbjct: 22 TVTSFQSETPETTIGERVSVSGELSFDRLLRIDGRFSGRLLSQGDLVVGPTGVLTGDVVDMGEVIVDGKVVGDISVQKVSLRGRAEVHGNITCKSLCVDPTVIVVGGLNVH 132
BLAST of mRNA_L-elsbetiae_contig8899.17918.1 vs. uniprot
Match: A0A5D6Y579_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y579_9STRA) HSP 1 Score: 122 bits (305), Expect = 9.440e-31 Identity = 61/120 (50.83%), Postives = 88/120 (73.33%), Query Frame = 1 Query: 91 ILAETPETTVGENVHVKGELSFERLLRVDGSFKGKLISTGDLVIGATGVVRGNIEHLREV-VSDGTVIGDIQAEKIRLRRSAIVIGNITCTSLSMDPDVSVSGKLNVHKEAPSRLHLEGE 447 I+ PETT+G V +KGELSFERLLR++G F+GKL+S G LV+GA GV+ G +E+++EV V+ G ++G+I EK+ LR A V GNIT ++ +DPD V G+LNV+ +AP ++ +GE Sbjct: 82 IVDAEPETTIGVAVKMKGELSFERLLRIEGEFEGKLVSKGSLVVGAKGVLTGPVENMKEVHVTGGKIVGNITVEKLVLRDKAQVFGNITAKTVKIDPDCVVVGRLNVNPQAPELINEKGE 201
BLAST of mRNA_L-elsbetiae_contig8899.17918.1 vs. uniprot
Match: A0A6G0WCC1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCC1_9STRA) HSP 1 Score: 116 bits (291), Expect = 7.370e-29 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 109 ETTVGENVHVKGELSFERLLRVDGSFKGKLISTGDLVIGATGVVRGNIEHLREV-VSDGTVIGDIQAEKIRLRRSAIVIGNITCTSLSMDPDVSVSGKLNVHKEAPSRLHLEGEEEAPE 462 ETT+G V +KGELSFERLLR++G F+GKLIS G LV+G G++ GNI+ ++EV V+ G V+G+IQ +++ LR + GN+T S+ +DPD + G LN++ AP +++L+GE A E Sbjct: 78 ETTIGVAVKMKGELSFERLLRIEGEFEGKLISKGSLVVGHKGLLNGNIDGMKEVLVAGGRVLGNIQVDRLVLRDKGQIFGNVTAKSVRIDPDCILVGTLNINPHAPQKINLKGEPIADE 196
BLAST of mRNA_L-elsbetiae_contig8899.17918.1 vs. uniprot
Match: F0VZS1_9STRA (Uncharacterized protein AlNc14C3G400 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZS1_9STRA) HSP 1 Score: 114 bits (286), Expect = 4.760e-28 Identity = 56/120 (46.67%), Postives = 81/120 (67.50%), Query Frame = 1 Query: 91 ILAETPETTVGENVHVKGELSFERLLRVDGSFKGKLISTGDLVIGATGVVRGNIEHLREV-VSDGTVIGDIQAEKIRLRRSAIVIGNITCTSLSMDPDVSVSGKLNVHKEAPSRLHLEGE 447 I+ ETT+G V ++GELSFERLLR++G F GKL+S G LV+G G + G+++ ++EV ++ G ++G+I EK+ LR A V GNIT S+ +DPD + G LNVH +AP + GE Sbjct: 86 IIDAEAETTIGAAVKMRGELSFERLLRIEGEFDGKLVSKGSLVVGTKGCLLGDVDSMKEVFITGGKIVGNIAVEKVVLRDKASVFGNITAKSIKVDPDCVIVGTLNVHPQAPQVIDENGE 205
BLAST of mRNA_L-elsbetiae_contig8899.17918.1 vs. uniprot
Match: T0RP53_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RP53_SAPDV) HSP 1 Score: 111 bits (277), Expect = 9.820e-27 Identity = 58/114 (50.88%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 109 ETTVGENVHVKGELSFERLLRVDGSFKGKLISTGDLVIGATGVVRGNIEHLREV-VSDGTVIGDIQAEKIRLRRSAIVIGNITCTSLSMDPDVSVSGKLNVHKEAPSRLHLEGE 447 ETT+G V +KGELSFERLLR++G F G+LIS G L+IGA G++ G +E ++EV VS G +IG+I E++ LR T S+ +DPD V G LNV+ APSR++L+GE Sbjct: 71 ETTIGVAVKMKGELSFERLLRIEGEFDGRLISKGSLIIGAKGLLTGPVEGMKEVLVSGGRIIGNINVERLVLRXXXXXXXXXTAKSIRIDPDCVVLGSLNVNPHAPSRINLKGE 184
BLAST of mRNA_L-elsbetiae_contig8899.17918.1 vs. uniprot
Match: A0A1V9ZZB6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZB6_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.600e-24 Identity = 53/114 (46.49%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 109 ETTVGENVHVKGELSFERLLRVDGSFKGKLISTGDLVIGATGVVRGNIEHLREV-VSDGTVIGDIQAEKIRLRRSAIVIGNITCTSLSMDPDVSVSGKLNVHKEAPSRLHLEGE 447 ETT+G V ++GELSFERLLR++G F G+LIS G LV+GA G++ G ++ ++EV +S G +IG+I E++ T S+ +DPD V G LNV+ APSR++L+GE Sbjct: 71 ETTIGPAVKMRGELSFERLLRIEGEFDGRLISKGSLVVGAKGLLTGPVDGMKEVLISGGRIIGNINVERLXXXXXXXXXXXXTAKSIRIDPDCVVLGSLNVNPHAPSRINLKGE 184
BLAST of mRNA_L-elsbetiae_contig8899.17918.1 vs. uniprot
Match: A0A067BQL5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BQL5_SAPPC) HSP 1 Score: 106 bits (264), Expect = 9.870e-23 Identity = 55/114 (48.25%), Postives = 76/114 (66.67%), Query Frame = 1 Query: 109 ETTVGENVHVKGELSFERLLRVDGSFKGKLISTGDLVIGATGVVRGNIEHLREV-VSDGTVIGDIQAEKIRLRRSAIVIGNITCTSLSMDPDVSVSGKLNVHKEAPSRLHLEGE 447 ETT+G V +KGELSFERLLR++G F G+L+S G LVIGA G++ G +E ++EV VS G +IG++ E+ T S+ +DPD V G LNV+ APSR++L+GE Sbjct: 777 ETTIGVAVKMKGELSFERLLRIEGEFDGRLVSKGSLVIGAKGLLTGPVEGMKEVLVSGGRIIGNVNVERXXXXXXXXXXXXXTAKSIRIDPDCVVVGSLNVNPHAPSRINLKGE 890
BLAST of mRNA_L-elsbetiae_contig8899.17918.1 vs. uniprot
Match: UPI001BD07C23 (polymer-forming cytoskeletal protein n=1 Tax=Chlamydiifrater phoenicopteri TaxID=2681469 RepID=UPI001BD07C23) HSP 1 Score: 99.8 bits (247), Expect = 2.380e-22 Identity = 54/129 (41.86%), Postives = 86/129 (66.67%), Query Frame = 1 Query: 31 DRNPDRTHPEENAAIYTSRNILAETPETTVGENVHVKGELSFERLLRVDGSFKGKLISTGDLVIGATGVVRGNIEHLREVVSDGTVIGDIQAE-KIRLRRSAIVIGNITCTSLSMDPDVSVSGKLNVHK 414 + NP + EEN+ + E PETT+GE V KGEL FE+LLR+DG+F+GKL+S+G +++G TG V+ +I +L E + +G V G++ + K+ R AI+IG+I+ +SL +D VS++G + V + Sbjct: 63 EENPKWSDQEENSVSLS----FVEEPETTLGEGVSFKGELVFEKLLRIDGTFEGKLVSSGKIIVGPTGRVKADI-NLGEAIIEGVVEGNVTTKGKVEARGEAIIIGDISASSLCVDEGVSITGYVCVSR 186 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8899.17918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8899.17918.1 >prot_L-elsbetiae_contig8899.17918.1 ID=prot_L-elsbetiae_contig8899.17918.1|Name=mRNA_L-elsbetiae_contig8899.17918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp VPRRLGERELDRNPDRTHPEENAAIYTSRNILAETPETTVGENVHVKGELback to top mRNA from alignment at L-elsbetiae_contig8899:4633..6950- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8899.17918.1 ID=mRNA_L-elsbetiae_contig8899.17918.1|Name=mRNA_L-elsbetiae_contig8899.17918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2318bp|location=Sequence derived from alignment at L-elsbetiae_contig8899:4633..6950- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8899:4633..6950- >mRNA_L-elsbetiae_contig8899.17918.1 ID=mRNA_L-elsbetiae_contig8899.17918.1|Name=mRNA_L-elsbetiae_contig8899.17918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1350bp|location=Sequence derived from alignment at L-elsbetiae_contig8899:4633..6950- (Laminarionema elsbetiae ELsaHSoW15)back to top |