mRNA_L-elsbetiae_contig889.17912.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig889.17912.1 vs. uniprot
Match: D8LG13_ECTSI (Vesicle transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG13_ECTSI) HSP 1 Score: 321 bits (822), Expect = 4.540e-107 Identity = 160/180 (88.89%), Postives = 167/180 (92.78%), Query Frame = 2 Query: 47 MDDAFASMKESSRRLLGGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFVLTFGSLFRVTQLLTGNPRPFVLYFTLGSLLSICSSFFLTGPWKQVKKMFAPVRAVATVIYLTTLALTLFVALSPYASVPGRGIVLLCLVIVQFLSYVWYTLSYVPFARRFMSGFWSGLRGRG 586 MDDAF SMK SS RLLGGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGF LTFGSLFRV QLLTGNPRPFVLYF+LGS L+ICSSFFLTGPWKQ+KKMF PVRAVAT IYL TL+ TLFVALSPYASVP RGI+LLCLV+ QFLSYVWYTLSYVPFARRFM+GFWSGLRG G Sbjct: 1 MDDAFESMKASSMRLLGGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRAVATSIYLATLSATLFVALSPYASVPFRGILLLCLVVAQFLSYVWYTLSYVPFARRFMAGFWSGLRGGG 180
BLAST of mRNA_L-elsbetiae_contig889.17912.1 vs. uniprot
Match: A0A835Z2J1_9STRA (Vesicle transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2J1_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.130e-56 Identity = 92/169 (54.44%), Postives = 132/169 (78.11%), Query Frame = 2 Query: 56 AFASMKESSRRLLGGEPEE-KSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFVLTFGSLFRVTQLLTGNPRPFVLYFTLGSLLSICSSFFLTGPWKQVKKMFAPVRAVATVIYLTTLALTLFVALSPYASVPGRGIVLLCLVIVQFLSYVWYTLSYVPFARRFMSG 559 A+ S++ S+RRLLG E K+ +E+EE VCS CPSL+++ RLIG+G CL +GF+LTFG+LFR+ +L+ GNP PFV+ +++G+++SIC+SFFL GPW Q+KKMF P R VAT +Y+TTL LT VAL+P +P R +L+ LV++QF+S++WY LSY+PFAR + +G Sbjct: 21 AYESVRVSTRRLLGQEEAPLKTRAEELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAP--RMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAG 187
BLAST of mRNA_L-elsbetiae_contig889.17912.1 vs. uniprot
Match: F0YE90_AURAN (Vesicle transport protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE90_AURAN) HSP 1 Score: 161 bits (408), Expect = 8.950e-45 Identity = 77/165 (46.67%), Postives = 110/165 (66.67%), Query Frame = 2 Query: 77 SSRRLLGGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFVLTFGSLFRVTQLLTGNPRPFVLYFTLGSLLSICSSFFLTGPWKQVKKMFAPVRAVATVIYLTTLALTLFVALSPYASVPGRGIVLLCLVIVQFLSYVWYTLSYVPFARRFMSGFWSG 571 S+R LL GEP ++ +++EE C CP LSW+ RLIG+ C A+G V+ GS R+ +L+ GNP+PF + ++LG++++ICSSFFL GP+KQ K M AP R +AT YL + TLFVAL A +P R +++ LV VQ ++ WY +SY+PFAR F+ G Sbjct: 3 STRSLLTGEPRPQTVAEQVEEECCKACPRLSWKQRLIGFSLCFALGVVVELGSFMRIVELVGGNPKPFAVTYSLGNVIAICSSFFLAGPYKQCKSMLAPTRVIATATYLVAIGATLFVALFD-ARIPARAGLIILLVCVQTIALFWYMISYIPFARDFVKNCCKG 166
BLAST of mRNA_L-elsbetiae_contig889.17912.1 vs. uniprot
Match: W7THB3_9STRA (Vesicle transport protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7THB3_9STRA) HSP 1 Score: 160 bits (405), Expect = 6.000e-44 Identity = 85/183 (46.45%), Postives = 122/183 (66.67%), Query Frame = 2 Query: 20 PTRTSAS*NMDDAFASMK-----ESSRRLLGGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFVLTFGSLFRVTQLLTGNPRPFVLYFTLGSLLSICSSFFLTGPWKQVKKMFAPVRAVATVIYLTTLALTLFVALSPYASVPGRGIVLLCLVIVQFLSYVWYTLSYVPFARRFM 553 P +S+S AFA+ +S+RRLLG E K+ + +EE +C CP+L+W+ RL G C VG +L FGS FR T+LLTG+P PF + +T+G+L+S+ S FL+GP+ QVK MF P RAV T +Y+ TL TL +A ++ VPG+G +L+ ++IVQFLS +Y LSY+PFAR+ + Sbjct: 9 PGASSSSSXXPAAFATSSSSNFMDSARRLLGVEARPKTFCERLEEDMCWWCPTLTWQQRLFGCLCCFLVGMILEFGSFFRFTKLLTGHPEPFAVMYTIGNLISLAGSCFLSGPFSQVKSMFHPTRAVCTSVYVLTLVFTLLIA---FSDVPGQGPLLVLMIIVQFLSLSYYILSYIPFARQMV 188
BLAST of mRNA_L-elsbetiae_contig889.17912.1 vs. uniprot
Match: A0A482RX34_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX34_9ARCH) HSP 1 Score: 148 bits (373), Expect = 1.260e-38 Identity = 71/152 (46.71%), Postives = 106/152 (69.74%), Query Frame = 2 Query: 89 LLGGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFVLTFGSLFRVTQLLTGNPRPFVLYFTLGSLLSICSSFFLTGPWKQVKKMFAPVRAVATVIYLTTLALTLFVALSPYASVPGRGIVLLCLVIVQFLSYVWYTLSYVPFAR 544 L+ EPE+K +E+EE+VCS CP +S + R++G C+ GF+++ GS R+ +LL G+P F + +TLG++L +CS+ FL GP Q K+MFA R A++IYLT + TLF+A P A VPGR +L+ +++QFL+ WYTLS++PFAR Sbjct: 19 LVSAEPEQKEWYEELEESVCSTCPKMSLQQRIMGCLVCMGTGFLISMGSTLRLVRLLEGHPEDFAVMYTLGNVLGLCSTCFLYGPLSQAKQMFASTRLAASLIYLTLMGTTLFLAFYP-AYVPGRLALLVLSIVLQFLALTWYTLSFIPFAR 169
BLAST of mRNA_L-elsbetiae_contig889.17912.1 vs. uniprot
Match: A0A7S2IBZ2_9STRA (Vesicle transport protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IBZ2_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.640e-36 Identity = 72/154 (46.75%), Postives = 109/154 (70.78%), Query Frame = 2 Query: 107 EEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFVLTFGSLFRVTQLLTGNPRPFVLYFTLGSLLSICSSFFLTGPWKQVKKMFAPVRAVATVIYLTTLALTLFVALSPYASVPGRGIVLLCLVIVQFLSYVWYTLSYVPFARRFMSGFWS 568 EEKS ++EE VC + P+L+ + R+IG +C+ G++L+FGS FR+ LL G P PFV+ TLG+++++C S FLTGP Q KKMF R +AT++YL+++ TL VA + + +PG+G +L+ L+I Q++S WY LSY+PFAR+ +S F S Sbjct: 49 EEKSWQDQIEEEVCELFPALTLQQRVIGCISCMVFGYLLSFGSFFRLAGLLKGKPVPFVVAATLGNIIALCGSCFLTGPAAQTKKMFHDDRRIATIMYLSSVIATLIVAFACH-KMPGQGPLLILLMICQYISVTWYCLSYIPFARQMVSQFCS 201
BLAST of mRNA_L-elsbetiae_contig889.17912.1 vs. uniprot
Match: A0A7S3JV88_9STRA (Vesicle transport protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JV88_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.750e-36 Identity = 69/161 (42.86%), Postives = 113/161 (70.19%), Query Frame = 2 Query: 83 RRLLG-GEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFVLTFGSLFRVTQLLTGNPRPFVLYFTLGSLLSICSSFFLTGPWKQVKKMFAPVRAVATVIYLTTLALTLFVALSPYASVP--GR-GIVLLCLVIVQFLSYVWYTLSYVPFARRFM 553 + LG E + K+ +E E+A+CS+CP L+++ R+ GY AC V F L+ GS R+ +L+ GNP PFV+++TLG++++I S FL+GP Q KKM+ P R +AT +YL T+ T+FVA Y +P GR GI+++C + +Q+++ +WYT+S++P+AR ++ Sbjct: 5 KEFLGLAEEKPKTAAEEFEDALCSICPQLTYQQRIGGYIACFFVSFCLSIGSFTRLVELVKGNPAPFVVFYTLGNVMAIIGSLFLSGPRAQCKKMWDPTRRIATSVYLLTIFFTIFVAF--YEGIPDDGRIGIIIMC-IFIQWIAMLWYTISFIPYARDYV 162
BLAST of mRNA_L-elsbetiae_contig889.17912.1 vs. uniprot
Match: A0A8J2SX58_9STRA (Vesicle transport protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SX58_9STRA) HSP 1 Score: 133 bits (335), Expect = 5.780e-34 Identity = 72/157 (45.86%), Postives = 104/157 (66.24%), Query Frame = 2 Query: 83 RRLLGGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFVLTFGSLFRVTQLLTGNPRPFVLYFTLGSLLSICSSFFLTGPWKQVKKMFAPVRAVATVIYLTTLALTLFVALSPYASVP--GR-GIVLLCLVIVQFLSYVWYTLSYVPFAR 544 R+ +G E ++ T Q ++E+ CP LS+ RL GY C+++GF+LT GSL R+ +LL G P+ FV+YFT G+L +I S FFL+GP KKM P R +AT YL T+ T FV Y +P GR GI++LC V +Q+++ +WYT+S++PFAR Sbjct: 5 RKAVGIEKKQTVTDQILDES----CPKLSYNQRLTGYVLCMSIGFILTMGSLVRLKELLHGEPKNFVIYFTFGNLCAIASCFFLSGPKSHCKKMIDPTRRIATAFYLITIFFTFFVVF--YEKIPDDGRVGIIILC-VFIQWIAMLWYTISFIPFAR 154
BLAST of mRNA_L-elsbetiae_contig889.17912.1 vs. uniprot
Match: A0A7S2XZK4_9STRA (Vesicle transport protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZK4_9STRA) HSP 1 Score: 129 bits (324), Expect = 6.670e-33 Identity = 62/123 (50.41%), Postives = 89/123 (72.36%), Query Frame = 2 Query: 182 LIGYGACLAVGFVLTFGSLFRVTQLLTGNPRPFVLYFTLGSLLSICSSFFLTGPWKQVKKMFAPVRAVATVIYLTTLALTLFVALSPYASVPGRGIVLLCLVIVQFLSYVWYTLSYVPFARRF 550 +IG L G +L+ GS+FR+ QL+ G P PFV++++LG+++S+C S FL+GPW Q+K+MFAP RA AT++YL+TL TL +A +P VP +G +LL L IVQ L+ WY LSY+P AR + Sbjct: 1 MIGCAVTLGFGLLLSMGSVFRIMQLIRGRPIPFVVFYSLGNVVSLCGSMFLSGPWNQIKRMFAPTRAFATIVYLSTLVTTLTLAFTP--GVPFKGGILLILFIVQLLALFWYMLSYIPGARNY 121
BLAST of mRNA_L-elsbetiae_contig889.17912.1 vs. uniprot
Match: A0A5D6Y7U4_9STRA (Vesicle transport protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7U4_9STRA) HSP 1 Score: 127 bits (320), Expect = 9.270e-32 Identity = 66/173 (38.15%), Postives = 107/173 (61.85%), Query Frame = 2 Query: 68 MKESSRRLLGGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFVLTFGSLFRVTQLLTGNPRPFVLYFTLGSLLSICSSFFLTGPWKQVKKMFAPVRAVATVIYLTTLALTLFVALSPYASVPGRGIVLLCLVIVQFLSYVWYTLSYVPFARRFMSGFWSGLRGRG 586 +++ ++LL E +++ E + +VCPSL+++ R+IG C +GF+++ GS FR+ +L+ G+P PF + +T+G+LLS+ SS F GP KQ++ MF R + ++Y+ + LTL + SP VP R ++L V+ QFL+ VWYTLSYVP+ RR + G G Sbjct: 5 LRQQRQKLLDPESQKREAGGSFREELGTVCPSLTYQERVIGCVTCFTLGFLISLGSTFRLAKLVNGHPGPFAMAYTIGNLLSLASSMFFVGPCKQLQTMFHRKRRGSALVYIVFIGLTLALCFSP--RVPHRVALVLVCVLTQFLALVWYTLSYVPYGRRIALSCCKRMCGAG 175 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig889.17912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig889.17912.1 >prot_L-elsbetiae_contig889.17912.1 ID=prot_L-elsbetiae_contig889.17912.1|Name=mRNA_L-elsbetiae_contig889.17912.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp MDDAFASMKESSRRLLGGEPEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGback to top mRNA from alignment at L-elsbetiae_contig889:14688..17622- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig889.17912.1 ID=mRNA_L-elsbetiae_contig889.17912.1|Name=mRNA_L-elsbetiae_contig889.17912.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2935bp|location=Sequence derived from alignment at L-elsbetiae_contig889:14688..17622- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig889:14688..17622- >mRNA_L-elsbetiae_contig889.17912.1 ID=mRNA_L-elsbetiae_contig889.17912.1|Name=mRNA_L-elsbetiae_contig889.17912.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1086bp|location=Sequence derived from alignment at L-elsbetiae_contig889:14688..17622- (Laminarionema elsbetiae ELsaHSoW15)back to top |