mRNA_L-elsbetiae_contig8831.17861.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8831.17861.1 vs. uniprot
Match: D7FZD7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD7_ECTSI) HSP 1 Score: 306 bits (783), Expect = 2.580e-100 Identity = 157/278 (56.47%), Postives = 193/278 (69.42%), Query Frame = 1 Query: 7 LVDECARRLELRSVSCDGDARDAEYRLPFMESGDLPCGFQNRMTSEMFEDLASRFKFHFVGDSTTRRLAESFVSIATGEASTHPYYHANRKLSSGSLQVMFHWAPYCSGAEDEPGISTVFKDIISKQEEEEEPGGDKRVIFVTAFGVWDAVHGSGDAAALSACTDTVTWLVQGEPYFSVGAEPADGSDASPPSLVFLLQNNPFLPGSEGDLFLNELHQAQQEIVENDGVGPQAEVYLVHDRESLYERMSCYRIREEIHFSDPVKLVEGKMLWDLIMFV 840 LV +CA RL+L +C+ ++ A++R+P M SGDLPCGF+ R+ + FEDLASR+ HF+GDST+RRL ESF+SIATG S H YYH +R L+ LQV FHWAPYC ++E +I+ Q + G +R I VTAFGVWD+ HG GD AAL C D V LVQ G+ A+ ASPP LVFLLQNNPFLPGSE DLFL +LHQ Q+EIV++ G Q VYLVHDRES++ R+SCYR+ E IHF+DPVKLVEGKMLWDLI V Sbjct: 68 LVRQCAERLDLPGYTCEKNSSSADFRIPLMGSGDLPCGFETRLPTSTFEDLASRYAIHFMGDSTSRRLVESFISIATGNRSAHVYYHESRNLTVDGLQVNFHWAPYCRQVKNES-----LHEIMDNQALD----GGRRAIIVTAFGVWDSSHGGGDEAALGVCADAVRSLVQVAQPPPAGSTTAENIAASPP-LVFLLQNNPFLPGSEQDLFLRDLHQIQREIVDS---GEQEAVYLVHDRESIFNRLSCYRMSESIHFNDPVKLVEGKMLWDLIELV 332
BLAST of mRNA_L-elsbetiae_contig8831.17861.1 vs. uniprot
Match: D7G0T6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0T6_ECTSI) HSP 1 Score: 208 bits (529), Expect = 7.550e-61 Identity = 133/350 (38.00%), Postives = 176/350 (50.29%), Query Frame = 1 Query: 1 RQLVDECARRLELRSVSC---DGDARDAEYRLPFMESGDLPCGFQNRMTSEMFEDLASRFKFHFVGDSTTRRLAESFVSIATGEASTHPYYHANRKLSSGSLQVMFHWAPYCSGAEDEPG-ISTVFKDIISKQEEEEEPGGDKRVIFVTAFGVWDAV------------------------HGSGDAAALSACTDTVTWLVQG---------EPY----------------------------FSVGAEPADGSDASPPSLVFLLQNNPFLPGSEGDLFLNELHQAQQEIVENDGVGPQAE-----VYLVHDRESLYERMSCYRIREEIHFSDPVKLVEGKMLWDLIMFV 840 R LV +CARRL++ C + + +YRLP MESG LPCGF+ R +E+ ED+AS+F FHF+GDST RRL ESFVSI TG+ S H H++ S+G+L+ F+WAP+C G+E ++TV + + + GDKR + +TAFGV D+ +GS A L AC T LVQ +P FS GA + P LVFL+QNN + P S D +L EL + Q+ V+ G E +YLV D SL+ +SCYR R IHF +PVKLVEGKMLWDL+ V Sbjct: 85 RTLVHDCARRLKVAGDLCGHSETPVVEDDYRLPHMESGVLPCGFEERTPNEVLEDMASKFTFHFIGDSTIRRLGESFVSIFTGQGSKHDMVHSDLDFSTGNLETRFYWAPFCFGSESVGAKLATVMDGVKTAKR------GDKRTVIITAFGVHDSYELPLLVKGSASTSYMDALPPDFVDNGSVRTATLGACQATTAQLVQAAAAKVMAWADPTAEKGQWSKAVHASPNTTTRSTTETNGVSFSFGAPGTTAATDPTPPLVFLMQNNRYPPNSPEDNYLEELRRIQRGEVQEWEAGEGNEDAEGGIYLVDDSVSLFRNLSCYRERNPIHFHEPVKLVEGKMLWDLLALV 428
BLAST of mRNA_L-elsbetiae_contig8831.17861.1 vs. uniprot
Match: A0A6H5L6U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U4_9PHAE) HSP 1 Score: 202 bits (513), Expect = 1.070e-57 Identity = 139/376 (36.97%), Postives = 179/376 (47.61%), Query Frame = 1 Query: 1 RQLVDECARRLELRSVSCD-GDARDAE--YRLPFMESGDLPCGFQNRMTSEMFEDLASRFKFHFVGDSTTRRLAESFVSIATGEASTHPYYHANRKLSSGSLQVMFHWAPYCSGAEDEPGISTVFKDIISKQEEEEEPGGDKRVIFVTAFGVWDAV--------HGSGD----------------AAALSACTDTVTWLVQ---------------------GEPYF------------------------------SVGAEPADGSDASPPS--------LVFLLQNNPFLPGSEGDLFLNELHQAQQEIVE-------NDGVGPQAEVYLVHDRESLYERMSCYRIREEIHFSDPVKLVEGKMLWDLIMFVGGG 849 R+LV CA RLEL + C G+ D + YRL M SG LPCGF+ R+ E ED+AS++ FHF+GDST+RRL ESFVSI TG STHP + SSG+L+V F+WAP CSG E + T D + ++ KR + +TAFGV DA HGS AAAL AC D T LV+ G+ SVGA D DAS P L+FL+QNN + PGS + F +LH+ Q++ V + G + ++LV D LY +SCYR IHF +PVKL+EGKMLWDL++ V G Sbjct: 70 RRLVTTCALRLELSADVCGKGEVPDPQDAYRLHHMHSGGLPCGFEERLGKEAMEDIASKYSFHFIGDSTSRRLGESFVSIFTGRGSTHPVVQRDINFSSGNLKVHFYWAPLCSGPESVGAMLTTVMDAVLAAKD------GKRAVIITAFGVHDAFELQHAANGHGSPSYQSTLPQDIVEKDGMRAAALGACRDATTQLVRTAAATAVPGTAAPPVEEEQSPGDAQHQLPNVSTQVGRHETSQKQAAGIPPNNVRGGSVGAGKEDALDASAPPAASGPLQPLLFLMQNNRYPPGSVENAFQEDLHRIQRQAVGEWEASEGSKGDDGERGLFLVDDSVGLYGNLSCYRSANPIHFDEPVKLMEGKMLWDLLVLVDNG 439
BLAST of mRNA_L-elsbetiae_contig8831.17861.1 vs. uniprot
Match: A0A6H5JGU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU9_9PHAE) HSP 1 Score: 187 bits (475), Expect = 2.960e-51 Identity = 139/414 (33.57%), Postives = 175/414 (42.27%), Query Frame = 1 Query: 4 QLVDECARRLELRSVSCDGDARDAEYRLPFMESGDLPCGFQNRMTSEMFEDLASRFKFHFVGDSTTRRLAESFVSIATGEASTHPYYHANRKLSSGSLQVMFHWAPYCSGAEDEPGISTVFKDIISKQEEE--------------EEPGGDKRVIFVTAFGVWDA------------------------VHGSGD-AAALSACTDTVTWLVQ----------------------------------GEPYFSVGAE------------------------PADGSDASPPS---------------------LVFLLQNNPFLPGSEGDLFLNELHQAQQEIVENDGVGPQAE------------VYLVHDRESLYERMSCYRIREEIHFSDPVKLVEGKMLWDLIMFVGGGGN 855 +LV +CAR+L L SCD +YR+P MESG+ CGF+ M E DLA +++F F+GDSTTRRLAESFVSI +G ASTHP H +S G L+V F WAP CS + GIS +D + + E G +R + TAFGV DA V G AAAL C D LV+ GE V A+ +DG LVFLLQNNPF P SE D FL +LH+ Q+++++ E V+L+ DR+SLY MSCYRI IHF +PVKLVEGKMLW L+ G G+ Sbjct: 231 RLVSDCARQLMLPGFSCDEPVLQDQYRVPLMESGNASCGFETLMPDEKLLDLALKYEFLFIGDSTTRRLAESFVSIVSGRASTHPVVHHRIDMSRGDLKVTFLWAPCCSV---DGGISAAVRDALGFRSSTYGSGNNNDGXXXXXXENGSPRRTVIFTAFGVHDATELRKAERDPELNQWYPMGLPQEAVAAQGPTAAALETCRDATRELVEVAAAXXXXXXXXXXXDGGGDVGNNPSLSEATGEGGEGQVVVNADGRRDGIADKKLRGGGGVSSEVAVHESDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFLLQNNPFNPRSELDYFLQQLHRIQEQVIDEAAAKQGCEXXXXXXXXXXXRVFLLRDRDSLYSSMSCYRIDGSIHFHEPVKLVEGKMLWHLVEIAGASGS 641
BLAST of mRNA_L-elsbetiae_contig8831.17861.1 vs. uniprot
Match: D7FUL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL3_ECTSI) HSP 1 Score: 183 bits (464), Expect = 1.060e-49 Identity = 138/438 (31.51%), Postives = 175/438 (39.95%), Query Frame = 1 Query: 4 QLVDECARRLELRSVSCDGDARDAEYRLPFMESGDLPCGFQNRMTSEMFEDLASRFKFHFVGDSTTRRLAESFVSIATGEASTHPYYHANRKLSSGSLQVMFHWAPYCSGAEDEPGISTVFKDII----SKQEEEEEPGGD-----------KRVIFVTAFGVWDAVH-------------------------GSGDAAALSACTDTVTWLVQ----------------------------GEPYFS--------------------------------------------VGAEPADGSDASPPSL-------------------VFLLQNNPFLPGSEGDLFLNELHQAQQEIVENDGVGPQA-----------------------EVYLVHDRESLYERMSCYRIREEIHFSDPVKLVEGKMLWDLIMFVGGGGN 855 +LV +CAR+L L CD +YR+P MESGD CGF+ RM E DLAS+++F F+GDSTTRRLAESFVSI +G ASTHP H +S G L+V F WAP CS G+S +D + S + GD +R + TAFGV DA AAAL C D LV+ +P S V +DG ++ VFLLQNNPF PGSE D FL +LH+ Q+++++ A V+L+ DR+SLY MSCYRI IHF +PVKLVEGKMLW L+ G G+ Sbjct: 203 RLVSDCARQLVLPGFGCDEPVLADQYRVPLMESGDASCGFETRMPDEKLLDLASKYEFLFIGDSTTRRLAESFVSIVSGRASTHPVVHHRIDMSRGDLKVTFLWAPCCSVG---GGVSAAVRDALGFRSSTYGSDNNYDGDDXXXXXXXXSPRRTVIFTAFGVHDATELRKAERDPELNQWYPMGLPQAAVATDGPTAAALQTCRDATRELVEVAAXXXXXXXXXXXXXXXXXXXXXXXXXKDPSLSEAXXXXXXXQVAVNADGRRDGIADKKLRGGXXXXXXXXXXXXXEVAVHESDGHGSNXXXXXXXXXXXXXXXXXXXXXXXVFLLQNNPFNPGSEHDYFLQQLHRIQEQVIDEAAAEQAAAKQGCEQHQDCEQXXXXXXXXXXRVFLLRDRDSLYSSMSCYRIDRSIHFHEPVKLVEGKMLWHLVDIAGASGS 637
BLAST of mRNA_L-elsbetiae_contig8831.17861.1 vs. uniprot
Match: D7G0V6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V6_ECTSI) HSP 1 Score: 156 bits (395), Expect = 9.110e-41 Identity = 112/339 (33.04%), Postives = 153/339 (45.13%), Query Frame = 1 Query: 112 PCGFQNRMTSEMFEDLASRFKFHFVGDSTTRRLAESFVSIATGEASTHPYYHANRKLSSGSLQVMFHWAPYCSGAEDEPGISTVFKDIISKQEEEEEPGGDKRVIFVTAFGVWDAV--------HGSGD----------------AAALSACTDTVTWLVQGEPYFSV-GAE---------PADG---------------------------------------------SDASPPS-------LVFLLQNNPFLPGSEGDLFLNELHQAQQEIVE-------NDGVGPQAEVYLVHDRESLYERMSCYRIREEIHFSDPVKLVEGKMLWDLIMFVGGG 849 PC Q R+ + E +AS++ FH +GDST+RRL ESFVSI TG S H +R SSG+L+V F+WAP CSG E + D + ++ KR + +TA+GV DA HGS AAAL AC DT T LV+ +V G E P DG ++PP+ L+FL+QNN + PGS + F +LH Q+++V + G G + ++LV + LY +SCYR IHF +PVKL+EGKMLWDL++ V G Sbjct: 77 PCVSQERLGKDAMEYIASKYSFHLIGDSTSRRLGESFVSIFTGRGSIHRIAQRDRDFSSGNLKVHFYWAPLCSGPESVGAMLASVMDAVRAAKD------GKRAVIITAYGVHDAFELHHAANGHGSPSYKSALPQDVVEKDGMRAAALGACRDTTTQLVRAAAATAVPGTEAPPVEEEQSPGDGRRQLPNVSTKVEVGPHETSEKQAAGIPPHNVRGGSVGAGNEDTLLGASAPPAASGPLQPLLFLMQNNRYPPGSVENAFQEDLHIIQRQVVGEWEASEGSKGDGGERGLFLVDNSVGLYGNLSCYRNANPIHFDEPVKLMEGKMLWDLLVLVDNG 409
BLAST of mRNA_L-elsbetiae_contig8831.17861.1 vs. uniprot
Match: A0A6H5JFC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC3_9PHAE) HSP 1 Score: 107 bits (267), Expect = 1.780e-23 Identity = 61/118 (51.69%), Postives = 73/118 (61.86%), Query Frame = 1 Query: 127 NRMTSEMFEDLASRFKFHFVGDSTTRRLAESFVSIATGEASTHPYYHANRKLSSGSLQVMFHWAPYCSGAEDEPGISTVFKDIISKQEEEEEPGGDKRVIFVTAFGVWDAVHGSGDAA 480 N T EDL+SR+ FHFVGDSTTRRLAESFVSI TG+AS H H +SSGSL+V+FHWAP C A + I +I++ Q GD R I +TAFGV +A GD A Sbjct: 72 NGGTLGTLEDLSSRYVFHFVGDSTTRRLAESFVSILTGQASPHFVVHERIDMSSGSLKVIFHWAPMCIDARSK--IQASIDEIVAAQLR----NGDARAIIITAFGVHNAHRLYGDQA 183 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8831.17861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8831.17861.1 >prot_L-elsbetiae_contig8831.17861.1 ID=prot_L-elsbetiae_contig8831.17861.1|Name=mRNA_L-elsbetiae_contig8831.17861.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=286bp RQLVDECARRLELRSVSCDGDARDAEYRLPFMESGDLPCGFQNRMTSEMFback to top mRNA from alignment at L-elsbetiae_contig8831:5448..6943- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8831.17861.1 ID=mRNA_L-elsbetiae_contig8831.17861.1|Name=mRNA_L-elsbetiae_contig8831.17861.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1496bp|location=Sequence derived from alignment at L-elsbetiae_contig8831:5448..6943- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8831:5448..6943- >mRNA_L-elsbetiae_contig8831.17861.1 ID=mRNA_L-elsbetiae_contig8831.17861.1|Name=mRNA_L-elsbetiae_contig8831.17861.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1716bp|location=Sequence derived from alignment at L-elsbetiae_contig8831:5448..6943- (Laminarionema elsbetiae ELsaHSoW15)back to top |