|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 672 |
| Cds size | 660 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816959.561103-CDS-L-elsbetiae_contig881:18382..18430 | 1622816959.561103-CDS-L-elsbetiae_contig881:18382..18430 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig881 18383..18430 - |
| 1691683942.3603864-CDS-L-elsbetiae_contig881:18382..18430 | 1691683942.3603864-CDS-L-elsbetiae_contig881:18382..18430 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig881 18383..18430 - |
| 1622816959.571625-CDS-L-elsbetiae_contig881:19071..19285 | 1622816959.571625-CDS-L-elsbetiae_contig881:19071..19285 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig881 19072..19285 - |
| 1691683942.3735616-CDS-L-elsbetiae_contig881:19071..19285 | 1691683942.3735616-CDS-L-elsbetiae_contig881:19071..19285 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig881 19072..19285 - |
| 1622816959.582401-CDS-L-elsbetiae_contig881:19764..19988 | 1622816959.582401-CDS-L-elsbetiae_contig881:19764..19988 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig881 19765..19988 - |
| 1691683942.3849764-CDS-L-elsbetiae_contig881:19764..19988 | 1691683942.3849764-CDS-L-elsbetiae_contig881:19764..19988 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig881 19765..19988 - |
| 1622816959.5950565-CDS-L-elsbetiae_contig881:22634..22808 | 1622816959.5950565-CDS-L-elsbetiae_contig881:22634..22808 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig881 22635..22808 - |
| 1691683942.3989332-CDS-L-elsbetiae_contig881:22634..22808 | 1691683942.3989332-CDS-L-elsbetiae_contig881:22634..22808 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig881 22635..22808 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816959.6091135-UTR-L-elsbetiae_contig881:22808..22820 | 1622816959.6091135-UTR-L-elsbetiae_contig881:22808..22820 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig881 22809..22820 - |
| 1691683942.4127219-UTR-L-elsbetiae_contig881:22808..22820 | 1691683942.4127219-UTR-L-elsbetiae_contig881:22808..22820 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig881 22809..22820 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig881.17841.1 >prot_L-elsbetiae_contig881.17841.1 ID=prot_L-elsbetiae_contig881.17841.1|Name=mRNA_L-elsbetiae_contig881.17841.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=220bp
MSMHDTTFSPYDTMENETDRMAVSNAQILAANGDSFGLAASLKGHRRNIS
ARKNYNQSTERFLRLFEQATAQHHASIPNSPRPHGSSAYDAAEKNSHALF
EPSGVRGDACSNRGSVFYGNASGDISQDETITSTDGQGSLREVELAWKQC
FDRLTKLENTLNGTHRGNLKLQRCIQKMDDQQALEALRKKLAKLTGEIED
TQERVGINIVEMQRFKGQSR back to topmRNA from alignment at L-elsbetiae_contig881:18383..22820- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig881.17841.1 ID=mRNA_L-elsbetiae_contig881.17841.1|Name=mRNA_L-elsbetiae_contig881.17841.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4438bp|location=Sequence derived from alignment at L-elsbetiae_contig881:18383..22820- (Laminarionema elsbetiae ELsaHSoW15)
CTTTCGTCAAAAATGTCAATGCACGACACCACATTTAGCCCCTACGACAC
GATGGAAAACGAGACCGACAGGATGGCCGTGAGCAATGCTCAAATCTTGG
CGGCCAACGGTGATTCCTTCGGGCTTGCGGCATCGCTCAAGGGACACCGT
CGCAACATCAGCGCCAGGAAAAATTACAACCAATCCGTGAGTGTAGAGTG
CCTGGTTATGCCGAGAGTTTCGACATTCTGAGTGTCCGGTGCTGGAGGTG
GATTCACGTTGATCAAAGATGACCCACAAGGTTTATCTAGACGTTTAGAT
AGACGTCTTTGGCCTTTGGTGGTGTTGGTTGTGGTCCTGCTTTGGGAGGA
AATTCACCTGAGTCTGAGCAATGTCCTTAGGGCAAAGACCCCTTAGAGTG
GGCAGAGGAGATGGGTAGGCAGCGGGAGAGAATCCCATGAGAGAGAGAGA
GAGAGCGAGCTATAACCCGCATTCCGCGTACCATGGGCGTGTGTGTCTCT
ATATTTCTAGACGTACCAGACTCCCTTGTAGACGTTGCTCATGGATAAAC
ACCCCAGAGAGGGTGAAGCAAGAGAGCAGACCACCTGCCTGCTGTTCTGC
CCGACTTGAAGCATTTTCAACGATTTCAAATATAGCTGAACACTGGGGGG
AAATAAAAAAAAAATGCCGAAACAATGTTGCGCCGACTTCCGCGCGCGCG
CGTGTGTTTGTGTGTGTTTGTGTGTGTTCGCGGAGAACCGAACACACACA
GCAAGATAAGAACAGCTAGATTACTTGTTGACTGCTGCTGTTGACTGCTG
TTCTGGTTGCGTTACAGCATTGTATGACGTTTCTGAGGGTAGTGTCAGCG
CGAAAACAGTTGCCACACTGGAGAACCAGAACCCGTTTCCGTCACCACGT
GCGCGTGGCTTGCAACCAACATCCCTAGGGAAGAGGCGAGAATCACCGAC
CGTGCGTGCCATGAACGTTACAGGAAGACTGTCCTGCCTTCACCTGTCTG
GAGGTAGTCGAGATAGGCGAAGAGTTATCAAGTGGGGGGCTGTGCGTGCG
TGCCATCTGGACCATGTCGAAAAAAAACGGCAAGTTTGCAGGAAAGAGCT
GACTGACGTTTTGTTCCAAGCTATTCAAGCGGAAAGGAACAGGAATCTCA
AACAGCCGGGCTGCTCATAACCACCACAGTTCCCGTATCGGTTACTAGAT
GTAGACTGGGCAAGGTATTCAGGCGTGCTCAACACAATACCGTTACAGGT
CGCAGAAAAAACTTTTTTTGGCTTTTCATTAACTAGACTTGTGGAAAAGA
GGGTTTCGTCCTCGACAGACGTTAGTGTGATCCGACCCTTTATGAAGGTG
GTACCCACATTACCCCCCCCTTTTTTCGAGTCTTTTTCTTGGTTGCTAGG
CAAGAAGAAGGCTCTTTAGGGGTAACCGGAACCCGACCGGCTGGCGTTCT
CTTCTTTTGTGCGTGTTTATAGCGGGGCCACCACTTCCGCTACAGCACTT
AGAAGTTACGAGTTCGATCATCGGTTCTTGGTTCTATCCCCCATATTGTT
TCTTTTTTCCAAGAGGAAAGTTCTTTTTGGCTTTCTATCCTGAAAAAGAA
ATCATGATGGGGAGATTCGAACTCCGGACTTTGTCCACCATAAACCGGTA
TCTAATCGTCGACGCCAATGTGGAAAAGAGGGTTTCGTCCTCGACAGACG
TTAGTGTGATCCGACCCTTTATGAAGGTGGTACCCACAAACTACCCATTA
TAAACTGGAGCCCTCAGCTATACGTGAGGGGCTCCGATCAGGCCAGCAAT
AAAAAACCCTTTGTAAAGCCATCATTATTTGGATATCTTCGTACATACGT
TCAGGAACCAACCATCCAAAAACCAGGCAAGAAAACACTTTTTATTTTCT
CCTCATATATTTCCAGTGCTCGATGGGCTCCTTGCCACGCCAAGGGCATC
TTGCCATTAGAATACTGAACCGTGGCCACACAGAAGGATTCCTCTCTCCG
AGGCCCCCACCCCCCCCTTCTGCGGTGCTTGTCTAAGATTTTGGTCGCGA
AAAGGGCTCAGCCGTCCCTTTCCCTCGTCGACGGTGAGGTCGAAGTTTGC
AACGCCAAGCGTTATCCACTGACAGGGACGAAAGGGAGAGAAAAAGCTCA
CTTTGAGCGAGCAAAAGTCACTTCCGCCGGGAATCGAACCCGTGACCTGC
CTGCTAGATGGTGTACGGGGATACCGACATTTGAGCCAGCTTATATGGGG
ATGGGGACGATTCGCCGCCAGGCAACTGTTCCGACACAGGTGTTACTAGC
AAAGGCACGTTCCATAAATATCTAGGACAGCGGAAGGCTTTCCCCGAGAT
TTTGAAATTTTTCCCGGGGGATTTCCGCAAGGGAATTTCTTGAGACATAT
TTGTTGCACGTATCTGCACCGCGATCGGGCGGCATTGACGGTATTGCAGA
AGGACCTTCTGTGCAAGGAATGGAGGCATTTCCACCTGCGTCCGGTCTCA
ATGGACTTTCTCCTTGTTCAGTTTGTCTTTCTCGACTTTTCCGAACGTGA
GATCTCTACAACTCGCTATGCAAGGGGAATTGCACATAAACATCCGTTCA
ACCCGGCACCTGTGCAAGCGTGAAACCCGGTGATCCTCTGCAACAGTGAC
GAAGAACACGTTTACCGTTTAAACTCTGTAACCATGTGCGATTTGTGGCG
TCTAGTTATGGCAGACACGGGATGTGTCAACAACCGAACGCGGGAAACGG
GTGTGCATCATCTTCCGCTCCCTCCCACAATCTTCTTCCTTTCGCTCTCG
TGCCCCTGATTCCCCCTGGCTGTGCTATGCAGACCGAGCGCTTCCTTCGC
CTTTTCGAACAAGCTACGGCGCAGCACCACGCCTCCATCCCAAACTCCCC
ACGGCCGCATGGCTCATCGGCGTATGACGCAGCAGAAAAAAATTCCCACG
CTCTATTCGAGCCTTCTGGCGTTCGCGGTGATGCTTGCTCCAACAGGGGC
AGTGTATTTTACGGCAACGCCAGTGGTGATATCAGCCAAGATGAGACAAT
CACCAGGTGCAAGTAGGTGGAGATGCAGCGCGTGCGGAGATCTTGTATGG
GCACACTTGATACAATATGGGGATGCTGTCGTTAAACTCAAACACCAAAC
AACTGGGGAAGAGTGTACGGTTAACGAGCTCTCTACATGCACTTAACGCT
GATAGTGCGTAGGGGAAAAGCCAGTTGCAGCAAATGCTCTGCTTGGATAC
GTCGCCTGGTATCCAAGGCTTAGTGACAATACGACCGGTCTGCCTCCTGT
CGGACACGAAACGCGAATTGACCCCATTGCAAGTACACAAGTACCTCAAT
AAACCGCGATTCCACGGCGGCATCGTTCCGCGCTCCCGAGCCCCACGCGT
TAGCCGTCTTTTGCTATCATCATGCTTTTGGAGTGGTTGGAATAGGAGAG
AAACGTCCCCAGTGGGCCTTCTTCCAGTGGGCCTTCTTCCTTGGCCACTT
GACCTTAACCTGGAAACTTATTGCTGCACTTTCAGCACCGACGGGCAGGG
GAGCTTGCGCGAGGTAGAGCTCGCTTGGAAGCAGTGCTTCGACAGGCTGA
CAAAGCTGGAAAATACCTTGAATGGTACCCACCGAGGCAATTTGAAGCTG
CAGCGGTGTATCCAGAAGATGGACGATCAGCAAGCATTGGAGGCACTGAG
GAAGAAGCTGGCGAAACTGACGGGCGAGATTGAAGACACACAGGAGCGGG
TAAGGGTTCGGGTTGGTTGTGCTATTTCTCCCGCATGCTCAGCACCCACA
TTACAATGCAGCGTTGCGTTCATCAAAGATTCGAAACCTACGCACTCTCC
CACTCTTTGTGCATACGAAGTACTGATGGTGAAATTAGCGGCTTATCACC
GGTGGTCTAGTTGGTACCCCCGAACACCTTCTAGCAGGCAGGTCGTGAAT
TCGAATCTCAGCGGAAGCGACTTTTTCTTGCGAAGTGAGTTTTTTCTCTC
GATTCCGTCCCTGTCAGTGGATAGCGCTTAGCGTGTGTACACAAACTTCG
ACCTCACCGTCGACGAGGGAAAGGGACGGCTGAACCCTTCTCGCGACAAA
AATCTTAGGCAAGCACCGCAAATGGGGGGAGTGGGGGCATTGGGGACAGG
AACCCTTCTGTGTGACCACGGTTCAGTACTCTGGCAAGATGTCCTCGTGA
CAGGGAGCCCATCGAGCACTGGAAATAAATGTGAAGAAGAAAATAACAAA
TTACACCGAGTTGATATCGCGGTGCCAGGGTGTCCTGGCGTGCTTTGTTC
ATGTTCCGCACCTAAAGCCCCGCCCCCACCCTCCCTGAAACACATGTTTA
AAAAGCTTGTGCTTCGCCTCGCGTTACCTTGCCCTGTCAGGTGGGCATAA
ACATCGTCGAGATGCAGCGCTTCAAAGGTCAATCGCGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig881:18383..22820- >mRNA_L-elsbetiae_contig881.17841.1 ID=mRNA_L-elsbetiae_contig881.17841.1|Name=mRNA_L-elsbetiae_contig881.17841.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1320bp|location=Sequence derived from alignment at L-elsbetiae_contig881:18383..22820- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCAATGCACGACACCACATTTAGCCCCTACGACACGATGGAAAACGA
GACCGACAGGATGGCCGTGAGCAATGCTCAAATCTTGGCGGCCAACGGTG
ATTCCTTCGGGCTTGCGGCATCGCTCAAGGGACACCGTCGCAACATCAGC
GCCAGGAAAAATTACAACCAATCCATGTCAATGCACGACACCACATTTAG
CCCCTACGACACGATGGAAAACGAGACCGACAGGATGGCCGTGAGCAATG
CTCAAATCTTGGCGGCCAACGGTGATTCCTTCGGGCTTGCGGCATCGCTC
AAGGGACACCGTCGCAACATCAGCGCCAGGAAAAATTACAACCAATCCAC
CGAGCGCTTCCTTCGCCTTTTCGAACAAGCTACGGCGCAGCACCACGCCT
CCATCCCAAACTCCCCACGGCCGCATGGCTCATCGGCGTATGACGCAGCA
GAAAAAAATTCCCACGCTCTATTCGAGCCTTCTGGCGTTCGCGGTGATGC
TTGCTCCAACAGGGGCAGTGTATTTTACGGCAACGCCAGTGGTGATATCA
GCCAAGATGAGACAATCACCAGACCGAGCGCTTCCTTCGCCTTTTCGAAC
AAGCTACGGCGCAGCACCACGCCTCCATCCCAAACTCCCCACGGCCGCAT
GGCTCATCGGCGTATGACGCAGCAGAAAAAAATTCCCACGCTCTATTCGA
GCCTTCTGGCGTTCGCGGTGATGCTTGCTCCAACAGGGGCAGTGTATTTT
ACGGCAACGCCAGTGGTGATATCAGCCAAGATGAGACAATCACCAGCACC
GACGGGCAGGGGAGCTTGCGCGAGGTAGAGCTCGCTTGGAAGCAGTGCTT
CGACAGGCTGACAAAGCTGGAAAATACCTTGAATGGTACCCACCGAGGCA
ATTTGAAGCTGCAGCGGTGTATCCAGAAGATGGACGATCAGCAAGCATTG
GAGGCACTGAGGAAGAAGCTGGCGAAACTGACGGGCGAGATTGAAGACAC
ACAGGAGCGGCACCGACGGGCAGGGGAGCTTGCGCGAGGTAGAGCTCGCT
TGGAAGCAGTGCTTCGACAGGCTGACAAAGCTGGAAAATACCTTGAATGG
TACCCACCGAGGCAATTTGAAGCTGCAGCGGTGTATCCAGAAGATGGACG
ATCAGCAAGCATTGGAGGCACTGAGGAAGAAGCTGGCGAAACTGACGGGC
GAGATTGAAGACACACAGGAGCGGGTGGGCATAAACATCGTCGAGATGCA
GCGCTTCAAAGGTCAATCGCGGGTGGGCATAAACATCGTCGAGATGCAGC
GCTTCAAAGGTCAATCGCGG back to top
|