mRNA_L-elsbetiae_contig881.17840.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig881.17840.1
Unique NamemRNA_L-elsbetiae_contig881.17840.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig881.17840.1 vs. uniprot
Match: D8LEA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA5_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 1.010e-114
Identity = 167/235 (71.06%), Postives = 194/235 (82.55%), Query Frame = 2 
Query:   14 DFLNGMISMSLTEAHGDPKTYEKNVHETMAGFPDLRAKRLKDYESVFTLVGPDDTARARRRKARRDSKETSIPKLLYTRHVQECSHQCLVLIDELREMTDRLFSWLTLCLPANDHPFSVSHRQRLKQFKNRLRSEMKKLEGLRAGVTATHASRVHTIRSMFITKEVSENNLAGWETAHHELLVMQETEAYLLLCRVWISTLDSTFLLHNYWKVNLKDADIAFATGNNATGNHDLF 718
            D L+G++S+SLTEAHGDPKTYE+NVHETMAG P LR KRL DYES+FTLV  +DTARARRRK        +   L     +QECSHQCLVLIDELRE+ DRL SWLT+CLPANDHP SVSHR++LK FK RLR+E+K LEGLR+GVT+ H+ RVHTIRSMF+TK+V+ENNL GWETAHHELLVMQETEAYL +CR W+ST+DS  L++ YWKVNLKDADIAFATGNN  G+H  F
Sbjct:    9 DLLSGVLSLSLTEAHGDPKTYERNVHETMAGLPGLREKRLADYESIFTLVDANDTARARRRKVLDFFMTRTKENLNRAGQIQECSHQCLVLIDELRELMDRLISWLTMCLPANDHPLSVSHRRKLKLFKGRLRNEVKILEGLRSGVTSAHSGRVHTIRSMFLTKDVAENNLLGWETAHHELLVMQETEAYLSMCRFWMSTMDSALLVYKYWKVNLKDADIAFATGNNGNGHHHFF 243
[Close]
BLAST of mRNA_L-elsbetiae_contig881.17840.1 vs. uniprot
Match: A0A836CFQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFQ5_9STRA)

HSP 1 Score: 184 bits (466), Expect = 3.460e-51
Identity = 97/222 (43.69%), Postives = 132/222 (59.46%), Query Frame = 2 
Query:   44 LTEAHGDPKTYEKNVHETMAGFPDLRAKRLKDYESVFTLVGPDDTARARRRKARRDSKET-SIPKLLYTRHVQECSHQCLVLIDELREMTDRLFSWLTLCLPANDHPFSVSHRQRLKQFKNRLRSEMKKLEGLRAGVTATHASRVHTIRSMFITKEVSENNLAGWETAHHELLVMQETEAYLLLCRVWISTLDSTFLLHNYWKVNLKDADIAFATGNNATGN 706
            L     D K YEKN+H+TM  F DLR  R ++   VF L+   D AR RR+K     ++  S      T  V E +H+ LV IDE RE+ D+LFSW  LCLPAN+  F+ SHR ++++F+ ++ +EMK+    R  V      RV T+R +F TKEV+  NL GWE AH ELL +QE+ AYL++ R W   L+S  LL+NYW +NLK   I F     ++GN
Sbjct:   35 LVSDEADAKVYEKNIHQTMTKFLDLRQSRKEEMYKVFKLISEKDHARERRQKVFEHFRDNISRVNSFQTGTVYEVTHEVLVFIDEFRELLDKLFSWCDLCLPANEQSFAESHRLKIQKFQMQIVNEMKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWEKAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDAGRSSGN 256
[Close]
BLAST of mRNA_L-elsbetiae_contig881.17840.1 vs. uniprot
Match: D8LE75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE75_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 1.030e-47
Identity = 99/227 (43.61%), Postives = 128/227 (56.39%), Query Frame = 2 
Query:   29 MISMSLTEAHGDPKTYEKNVHETMAGFPDLRAKRLKDYESVFTLVGPDDTARARRRKA-RRDSKETSIPKLLYTRHVQECSHQCLVLIDELREMTDRLFSWLTLCLPANDHPFSVSHRQRLKQFKNRLRSEMKKLEGLRAGVTATHASRVHTIRSMFITKEVSENNLAGWETAHHELLVMQETEAYLLLCRVWISTLDSTFLLHNYWKVNLKDADIAFATGNNATGN 706
            M+  SL  A  D K YEKN+H+TMA FP+LR +R  DY  VF L+   D AR RRRK     +   S      T  + E S + L+L+DE RE+ DRLFSW  LCLP ND  F+ SHRQ++++F+ ++  EMK+    R+                   +EV   NL  WE AHH+LL  QE  AYL + R W   L+S  LL+NYWKVNLKD +I F     +TGN
Sbjct:    1 MLQRSLG-AETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQVQIVQEMKRSNSARS-------------------QEVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKSTGN 207
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig881.17840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LEA5_ECTSI1.010e-11471.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CFQ5_9STRA3.460e-5143.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LE75_ECTSI1.030e-4743.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig881contigL-elsbetiae_contig881:10092..17315 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-00_001510.1
Exons9
Model size1458
Cds size723
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816959.7140408-UTR-L-elsbetiae_contig881:10091..100921622816959.7140408-UTR-L-elsbetiae_contig881:10091..10092Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig881 10092..10092 +
1691683942.4715796-UTR-L-elsbetiae_contig881:10091..100921691683942.4715796-UTR-L-elsbetiae_contig881:10091..10092Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig881 10092..10092 +
1622816959.8278956-UTR-L-elsbetiae_contig881:16581..173151622816959.8278956-UTR-L-elsbetiae_contig881:16581..17315Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig881 16582..17315 +
1691683942.557177-UTR-L-elsbetiae_contig881:16581..173151691683942.557177-UTR-L-elsbetiae_contig881:16581..17315Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig881 16582..17315 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816959.7246842-CDS-L-elsbetiae_contig881:10092..101611622816959.7246842-CDS-L-elsbetiae_contig881:10092..10161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 10093..10161 +
1691683942.4807107-CDS-L-elsbetiae_contig881:10092..101611691683942.4807107-CDS-L-elsbetiae_contig881:10092..10161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 10093..10161 +
1622816959.73516-CDS-L-elsbetiae_contig881:10628..107051622816959.73516-CDS-L-elsbetiae_contig881:10628..10705Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 10629..10705 +
1691683942.4888678-CDS-L-elsbetiae_contig881:10628..107051691683942.4888678-CDS-L-elsbetiae_contig881:10628..10705Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 10629..10705 +
1622816959.74584-CDS-L-elsbetiae_contig881:11010..111111622816959.74584-CDS-L-elsbetiae_contig881:11010..11111Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 11011..11111 +
1691683942.4992723-CDS-L-elsbetiae_contig881:11010..111111691683942.4992723-CDS-L-elsbetiae_contig881:11010..11111Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 11011..11111 +
1622816959.7580798-CDS-L-elsbetiae_contig881:12044..120891622816959.7580798-CDS-L-elsbetiae_contig881:12044..12089Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 12045..12089 +
1691683942.5074918-CDS-L-elsbetiae_contig881:12044..120891691683942.5074918-CDS-L-elsbetiae_contig881:12044..12089Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 12045..12089 +
1622816959.769126-CDS-L-elsbetiae_contig881:12950..130571622816959.769126-CDS-L-elsbetiae_contig881:12950..13057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 12951..13057 +
1691683942.5158343-CDS-L-elsbetiae_contig881:12950..130571691683942.5158343-CDS-L-elsbetiae_contig881:12950..13057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 12951..13057 +
1622816959.7805362-CDS-L-elsbetiae_contig881:13812..138601622816959.7805362-CDS-L-elsbetiae_contig881:13812..13860Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 13813..13860 +
1691683942.523975-CDS-L-elsbetiae_contig881:13812..138601691683942.523975-CDS-L-elsbetiae_contig881:13812..13860Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 13813..13860 +
1622816959.7915335-CDS-L-elsbetiae_contig881:15104..151611622816959.7915335-CDS-L-elsbetiae_contig881:15104..15161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 15105..15161 +
1691683942.5318172-CDS-L-elsbetiae_contig881:15104..151611691683942.5318172-CDS-L-elsbetiae_contig881:15104..15161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 15105..15161 +
1622816959.8036156-CDS-L-elsbetiae_contig881:15572..156351622816959.8036156-CDS-L-elsbetiae_contig881:15572..15635Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 15573..15635 +
1691683942.5402424-CDS-L-elsbetiae_contig881:15572..156351691683942.5402424-CDS-L-elsbetiae_contig881:15572..15635Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 15573..15635 +
1622816959.8164577-CDS-L-elsbetiae_contig881:16425..165811622816959.8164577-CDS-L-elsbetiae_contig881:16425..16581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 16426..16581 +
1691683942.5485303-CDS-L-elsbetiae_contig881:16425..165811691683942.5485303-CDS-L-elsbetiae_contig881:16425..16581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig881 16426..16581 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig881.17840.1prot_L-elsbetiae_contig881.17840.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig881 10093..16581 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig881.17840.1

>prot_L-elsbetiae_contig881.17840.1 ID=prot_L-elsbetiae_contig881.17840.1|Name=mRNA_L-elsbetiae_contig881.17840.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp
MDDTDFLNGMISMSLTEAHGDPKTYEKNVHETMAGFPDLRAKRLKDYESV
FTLVGPDDTARARRRKARRDSKETSIPKLLYTRHVQECSHQCLVLIDELR
EMTDRLFSWLTLCLPANDHPFSVSHRQRLKQFKNRLRSEMKKLEGLRAGV
TATHASRVHTIRSMFITKEVSENNLAGWETAHHELLVMQETEAYLLLCRV
WISTLDSTFLLHNYWKVNLKDADIAFATGNNATGNHDLFS*
back to top

mRNA from alignment at L-elsbetiae_contig881:10092..17315+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig881.17840.1 ID=mRNA_L-elsbetiae_contig881.17840.1|Name=mRNA_L-elsbetiae_contig881.17840.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7224bp|location=Sequence derived from alignment at L-elsbetiae_contig881:10092..17315+ (Laminarionema elsbetiae ELsaHSoW15)
CATGGATGACACCGATTTTCTCAATGGGATGATATCGATGTCTCTGACGG
AGGCCCATGGCGATCCCAAGGTGTGCTTCAAAATGCTGCCAGAGTGCGCA
GTTCCTTCGGACATTATTGGTAGACTATCTACATGACTACCGGCATTTGT
ATTGGACCGGATCCTTTAGAAGATAGAGGCCGGTTGGCCTTTGCTCCGAG
TACTCCCTCTCAGTATCTTCGCAGCAGGCCCCGTCGCGTACGAATCACCT
AGTAGAAATCTCCATAAATGCAAAAGGCCCTGTGCTGCGTGACTCAAGCC
GTGTAGTACCAGGCTCGATCTATCTACTATCTAGATATATCTAGGCTAGA
CTATGTAGGTGAAACAGATACATTTAGCGGGTTTCTGCTCTCAGTGTCCA
AGTTGAGGGACACGCCTCTCTATATGTCCATACATATGCACCTCGTGTAC
TCTCCCTCACTACTACTGCAACTACGTTGTTGTTTGTCTATCTAAATATC
TCTAAAAATATACAAACCAATCCTTGCTTGCCGCCAGACATACGAAAAAA
ACGTGCACGAGACAATGGCGGGCTTTCCTGACCTGCGGGCGAAGAGGCTG
AAGGACTACGAGAGGTGATACTGCTGCTGCTGCTGCTGCTGTGTATGCAC
GTTCGAAGTATATAAACCCGATGTACTGCAGCAAAGGAGAATCCACGCCG
GCGAACCGCACCACACACCCCGGTCTAAGTCACAACAATATCCCCCCACA
CACACACTGGTCGCCCGCCCCTCTGGGGGCCGTAGTTGAGCCTCTGGAAA
AGCTTATCGGCCCTGTACTTGTAGATTGCACACGGACGGTTTCTGTTTGG
AAATAACCTCGAGGAGAACGATCCTCGGCCCCTTCGACTCTGCTCCGCTT
CCCACCTGCTGATGAACAGTGTGTTTACGCTTGTGGGCCCGGACGACACA
GCAAGAGCAAGGCGAAGAAAGGCGAGACGAGACAGCAAAGAGACATCAAT
ACCGAAACTGCTTTATACTAGTGCCGCCTGTGATGTAGCAGGGCATGTAT
GTATGTATGTATGTATGTGTGTGTGTGCCACGGAGCGGGCGGCTGCCGTT
TTGGGGTGACCTCCTCGAGACAGCACTGGTAAATATACAGATGGTTTACT
GTGTAAGTGCTGCGCTTTTACCCAACATACTATCGCTTGATGATATTAGA
TGCCTAACTACCTGGCGGAGGGTGATCGTGGTGGAAAGCAGCCATCCTTA
CTGCTGTTTTGTGGTGGCTGACTGTTGTGTCCATGCTCGTCCACACCACA
TTTGTCTGTCGCTGATAAAATACATTCATACAGGTTCTGGAGTTCTTCAA
GACCAATATGAAGGAAAACCTGTGAGTCCAGCAACGATGGTTAATGCCAA
GTATTTGGGCCTGCGGTGCGGTATCAAGTGTATACATAGCTTAGTTGCTC
AATTTTGGCATCATGTACGTCAGCCCCGTCGGACCGTACATTGTACATGC
CTCCACCGTCTGTCATCTGTCGCAAAAACGTTACCGCGTGTGTCGTACGG
GAGACAGCGCCGAGCATCAGTCCACGTGTAGTGACAGTTTACACTGGCAG
CTCCCGCTCGTCTCCTCACAAAGGATCACATTCGGCACCGGCCCACCTTT
CCTCACTTTGCCTTATCTATCTCGCGGGGCTTAAACACATGCGCACGCGC
GTGTGTGTTTGGCGTCATCTTTATCTTTCTCTCTTAACTCCTTTGCCTCG
GGCCTCCAGATGTCCCTACCCAGTACCTACGCTTTTTATCCCCTCACTCC
TTTCTCCTCTTGCCTTGCTCGTCCTCACACCGTGCGTGCCCAGGGTACAT
ACTCTGCGTACCCCCCCCCCACCTGGGGTAAGCAACGGAGCTAACGCCCC
AGCCGCGTTTTCGTGTGTCGCCTCTCAACTTTGTCGACGCAGGAACCGGT
CAGGACACGTCCAGGAGTGCTCCCATCAGTGCCTGGTTCTGATCGACGGT
AATTCTGCTTTTTAGGAGTTACGGGTCTACACATACACGCCTGTATTTTC
TGCCGTTTGTTCATAAACACACACACATGTACGTGAGTTTGCGTGCCGCA
AGTTTGGTCATAGAGCTTCGTTGTGATGGTTTTGTCACCGATGACGGTGC
AAATGAAGCATAAGTTTCTCAAAAACGTTTATTTGTTCGGCCTTAAGGCT
GTTTCTCATAGGACCAAAAAAGCTAATCGAAAAGTGTGCATTCGCCCGAG
AATGCCACTGTGCGCGAGATACGAGATTACTCAGCAGCCAGTAGAAAAGA
CCTGAGCATCACCCAGTTCTCGGCCCCAAGGGCACCGATTGCAATCGGAG
CACTTCAGGCGTGTGCTCCATGGTGATATCTCTGGGCGTGCCAGTCGTGT
GGGGCATGGGCGTTGCGTGTGGCGAGAGCTTTGTGTCGAAGTAGAATCTG
ATCCGAACTTTTTTGGTTTCACTTGAATCGGAAAAAGCATGCAAATCCGA
TTCGATTCCCACATTCTACTCCGACACAAAGCTCTCGCCACACGCAACGC
CCATGCCCCACACGACTGGCACGCCCAGAGATATCACCATGGAGCACACG
CCTGAAGTGCTCCGATTGCAATCGGTGCTCTTTGGGCCGAGAACGGGGTG
ATGCTCAGGTCTTTTCTACTGGCTGCTGGGGAATCATGGAACTCGCGCAC
AGTGGCATTCTCGGGGCGAATGCACACTTTTCGATAAGCTTTTTTGGTCC
TATAAGAAACGGCCTAGGTGTGACTTCACCCCTGGTGCTCATCCCCCCCC
CCCATTGAAGTGTTTCTGCGTCCTGTTTTCCGCGTGTTTCTTCTTCGTCT
TATTCGCAGAGCTCCGAGAGATGACGGACCGCCTGTTTTCCTGGCTGACA
CTCTGCCTTCCCGCGAATGACCACCCCTTCTCAGTTTCCCACCGCCAAAG
ACTCAAGCAGTTCAAGGTAGGCGTCCGTCCTTGTGGCTAAACGGTCCCGT
CTTCAAGCACGGGCGGGCGGCTTCCGGGGTCGGGAGGAGAAGTGCTCCGC
CCTCCGCCGAGCGTTGCGGTTTTTGTCGTTGGTCTCGTCGTGGTTGTCCC
GCCTCTCGTTGCTCTTCCCTATCAGAGGCCGACAGACGCCTGCATTTCGT
TACGAAGGGGTTGTGTGGATAGTTATCGACGGCGGCGAATCCCGGGAGTA
GACCGGGGCTCTGGTCCGGTGTCTACATAGGGAGGGTTCTTGGGTACGGG
CGTGGCACCACCGTGGATGGCGTGGGGGGCGAGTTTGTTCGGGTTGGATT
TGATATCTTGAGGGGGAGACGTTTCAGGACTCTCAAGACGCCGTGCATCT
CGTTGGGACACTTGGGGCCGCAGCCTCACAGGCTCTTTCGTGACTCGTGC
ATACGTTTTTTTGTTAAATTTTTGTACTAAACGCCAGCGGCTTACGTCCA
ATCTGTGAAAAAGTCGTGTAGGGGGGTTGTTGTAGACACACTACCCCTCC
TTCGCCGTCCCAGGCTACGGGCACAAAATCCGCGCTCCGTAGTACAATTC
GCTGGTGGAACACTCACTTCCGAAGGCTCTTCGTTCTCGGCGAGGTTGTC
CCCTACCGCTGCTGCCGCTGCTGTTGCTACGTTGCTCGTTGTGTGTGTGC
GATGGGTAATTGCATTGTGGAAGGGGTGCGTGCTCTCACGGCAATTGTAC
CCGCTATGTATCTTCTGACAGAACCGTTTGCGGAGCGAGATGAAGAAGCT
GGAGGGACTCCGAGCAGGGGTGAGTGAGACAAGCTGCTGCTGCTGCTGCT
GCTGTGGCAGCCTTTGCTCTGCTGCGGAAAACTTCATGCATTGCCCCGTG
TACATAGTCTACATATGCAGGGAATATCCGGGGACTCGACAGGGCTCTCG
ACCACTGCTGTGCTATTTCCTTTGATCAATCTTGGCGACTGGAAGAAACG
CCATATGTTTTCCATACACACATACATACGTGATTAATTTGTGATGCTGA
TATTCCTGCCGCCTTTGCTCGTTTTCCCTCTGTCTAGCGTCAGCCTTAAC
ATTAGCCACGTATAGCCTACGGTGGCTCTCCCCTTTTGTTGCAGCGCCCA
ATGTAGAAGTGGGGCGGTCGCTCACGTGTCGTTGTTCTCACGGTAGCTGT
ATCCCAAAAAAACACCTGCCCGTGGTCGCGAAAGTGCTAGAGCCATCAGA
AGATCCGAAAAAAAAGACACGTCCACCGGATAAAGGGGCTACTGTAACAA
AAAAGACTGAAGAGGTACCGCCTAATTTCCGGCAAAAACTGCTGTGTGTC
CAACTGAACCGCACATCCACAAGTCTCCATTTGACTGCACTACTACATAC
GTCTGCCCATGCATGGATTGTCGACTACAGCACGGCAACTGCTGTCTGGA
GTGCTGTCTGTACAAAGAACAGACGGCCGCGGCGGAAACGGGAAGGGAAC
CCAGTTGCTGTCTGAAGTGCTGTCAGAATGACAGTCCGAGACACGCAGTG
AAGGGGAACAACCAACCAAAGCCACCAAAATGGTCGGCGATTACCAAGTC
TATCCCGAATCATCTGCTGTGGTAGGCACAGTGGCAAAAACAAAAAACGA
CACCAATGCGTTTCGTTCCATGTTGAAGGGTGTTCTTCCACGAGCGGGTG
CACCATTATCTAGGTGCAGCACCGTGGTAGGTATGCATGTAACGCAGGCA
TTTCTGCCGCGTCTCTCTACAAAACCAGTGACGCCATCTCACAAAGACCA
GGCACAAAGATTCAGAGGGAGAAAGCGGAATAATGCCAACACACACATGC
TGCTTGTCCGTGCGTCACGGCTCGTTGTCCTCCGAATGCTCCGATGCTGC
TGTAGCCGATCCCCGCACGGCCACACTTGATCCGCTCCGTACTTACGTGT
GCCTCGGCGTGATCGCCCGCTCTACTGATTTCGCCGCGACAGTAGCTTCC
GTCGCCTCACGGGCCTCGCTTTTGCTTCCCCCGCCTCCCTGCACGTCCAA
TGGAATTCGGCAGGTGACTGCTACGCATGCCAGCCGCGTGCACACCATCC
GATCCATGTTCATCACCAAGGTACGCTACTGCTGTAGCTCCGTTCTTTCC
CGCACTGCCCAACCGCATTGAACAACTGCCCCGAGTATCCCGATGGTGGT
TTTCACGGCGGTCTGGCAGGTGGAGAAAGGTCTGTCTCTTCAAACTCCCT
TCTTCCGCTTCGTTGTGCACTTTGAAGGCGGATTCTTGAAGCCCTCGACC
GTTTGGAGGAGAAATTAGATCTTTAGTTTGTAGCCGATAGGTATTGCTAG
AGTGTCAAGCTGAGGCTTCTTTTTTAGGCGTCCGAACCCCAAAGAACGCT
GGGATGGTGGGTGGATTATGTTAATATCTTGTTGCTTGTGTTCTTCTTGG
TGCCAGAAAATTGGAGGAAGCACCCTCCACCCTCGACTAAACGTGTTTTC
TTTGCGTGCGTTCGCTGCTGGCACTCTGCAGGAGGTCTCGGAGAATAATC
TTGCTGGGTGGGAGACTGCACACCACGAGCTCCTCGTCATGCAGGTGATG
AAGCGGGCATCAACAGCGCACCACGGGCAGAAAGCGCACGCGTCCATACG
AAGGGCCAACATGCGCAAGCCCGTTTGACGTTTCTAGCGGGGTATTATAA
AGTGAAAATTATCCTGGCGGAGATTGTGGTACACATGCTTGTGGCATGGA
CGACAGGAGTGGAGCTTGACCTTCTGCCCTGAACTCCTGGTGCATGAGTT
ATCGCCGCGAAGAGTGTGTATGCTTTCCTTGGTTCGCCGGGACCATCAAC
AAAATCGCACACCACACCAGGGGGGTTTTCAAGTGCGAGCAAGCGCCCAC
AGCGCACCATGCAGCCTCGCGTGGTGAAGGCATGTCCCTTGTACATAAAA
ATCTTGGAACTGCGCGCCTCCGAAACTAACAGTTTGTGCCCTTGATTGTT
CATATTAGATGCTCGAGGACAAGCCACTTGGACATCCTGTCGCGGCTCTA
TAGCTTTGTCTTGTACACACACACACACACACACACACAACTTGCTTCCG
AGTACCAGGGGCGATTCTGCGATGTGATCCTGCTCAATCTTCAATCTTTC
TTTCGGCCATGGTCTCGCAGTGTGTTTTTTTTTTGTCGGCCGTTTCGGTT
CGGACGCTGTCCCGCTCCGCCCTCATGCGCGCGCGGGTACGCGATGGTTT
CTGCGGCAAGCACAGTGAGTAGCTCGTTGTGCATGTCGCGACCGACTCAA
GAGGTTGAAACTACGTGGCTGATACCCCCACCCCTCAATTGCGAACGCGC
GGGCCCCTCGCGCCATCGTCGCACCCGACCGCAGGAGACCGAAGCCTACT
TGCTGTTGTGCCGCGTGTGGATCTCCACCCTGGATTCGACCTTTCTGTTG
CATAACTACTGGAAGGTCAACCTCAAGGACGCCGACATCGCCTTCGCGAC
GGGGAATAACGCCACCGGAAACCACGACTTATTTTCGTGACACGACACAC
CCACCGATTGCGAATCACCCGGCTATGTATCTATGTAGTCTTCTTCGGGA
ATGTTTTCCCCCCTTGTTTAGGTAGGTAGGTGCCTTGCGCATTGCCCCAG
GTAAAACAAGAGCTCATGCCGACATTTTCGATTCCGATCTGCGTTGACCA
TTCGGGCTCAGAGCCTGTGCTCTTGTTTGGCCTGAACTGGGGCTACGTGC
TCGAGGTAGCTGAGGGTATCCCGATGGGCCTTGAGTATGTGAATGGTACT
GTATATGGTGAGTCTGAGAGCAAGTGTGAGCTGCAAGAAAACCGGCGAGA
ACGTCCTGGAATGTTTAGATTTTAGATTTTGAGCCTCGTCTACCGGTAGG
GCGACGGTGGCGGCGAGCCGCTGGGTGGAGCACGCTTGAATTTTCCGATA
TGTATGTGTTTTTTGAAGTTTGGAACAAAGATCAGTCAAGTGGTGTTTGG
AGGGCGGCTTGCGGGTGAGGTTGCAGACCGCGCGAGGTTTCAGTTTCGAA
CAGTTCTTGCTCCGTCGCCCCCCTCTCTTGTATCTCTGTTGAGGAAAAGG
CCGCAGGAGTTTCTATGCGGTTACGTTCGCGATTTCTCAATCTTGCCCAC
ATACGAAGTAGATCCTATAGTAGTCTACACCTTTTTGATGTTTCTCGATT
TTTTCCCCGGGTATGTGTAGCTAATACCAGAGAACACTGCCGGCCAGATC
AAATACAAGAATCGCAAGTGCCAC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig881:10092..17315+

>mRNA_L-elsbetiae_contig881.17840.1 ID=mRNA_L-elsbetiae_contig881.17840.1|Name=mRNA_L-elsbetiae_contig881.17840.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1446bp|location=Sequence derived from alignment at L-elsbetiae_contig881:10092..17315+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGATGACACCGATTTTCTCAATGGGATGATATCGATGTCTCTGACGGA
GGCCCATGGCGATCCCAAGATGGATGACACCGATTTTCTCAATGGGATGA
TATCGATGTCTCTGACGGAGGCCCATGGCGATCCCAAGACATACGAAAAA
AACGTGCACGAGACAATGGCGGGCTTTCCTGACCTGCGGGCGAAGAGGCT
GAAGGACTACGAGAGACATACGAAAAAAACGTGCACGAGACAATGGCGGG
CTTTCCTGACCTGCGGGCGAAGAGGCTGAAGGACTACGAGAGTGTGTTTA
CGCTTGTGGGCCCGGACGACACAGCAAGAGCAAGGCGAAGAAAGGCGAGA
CGAGACAGCAAAGAGACATCAATACCGAAACTGCTTTATACTATGTGTTT
ACGCTTGTGGGCCCGGACGACACAGCAAGAGCAAGGCGAAGAAAGGCGAG
ACGAGACAGCAAAGAGACATCAATACCGAAACTGCTTTATACTAGACACG
TCCAGGAGTGCTCCCATCAGTGCCTGGTTCTGATCGACGGACACGTCCAG
GAGTGCTCCCATCAGTGCCTGGTTCTGATCGACGAGCTCCGAGAGATGAC
GGACCGCCTGTTTTCCTGGCTGACACTCTGCCTTCCCGCGAATGACCACC
CCTTCTCAGTTTCCCACCGCCAAAGACTCAAGCAGTTCAAGAGCTCCGAG
AGATGACGGACCGCCTGTTTTCCTGGCTGACACTCTGCCTTCCCGCGAAT
GACCACCCCTTCTCAGTTTCCCACCGCCAAAGACTCAAGCAGTTCAAGAA
CCGTTTGCGGAGCGAGATGAAGAAGCTGGAGGGACTCCGAGCAGGGAACC
GTTTGCGGAGCGAGATGAAGAAGCTGGAGGGACTCCGAGCAGGGGTGACT
GCTACGCATGCCAGCCGCGTGCACACCATCCGATCCATGTTCATCACCAA
GGTGACTGCTACGCATGCCAGCCGCGTGCACACCATCCGATCCATGTTCA
TCACCAAGGAGGTCTCGGAGAATAATCTTGCTGGGTGGGAGACTGCACAC
CACGAGCTCCTCGTCATGCAGGAGGTCTCGGAGAATAATCTTGCTGGGTG
GGAGACTGCACACCACGAGCTCCTCGTCATGCAGGAGACCGAAGCCTACT
TGCTGTTGTGCCGCGTGTGGATCTCCACCCTGGATTCGACCTTTCTGTTG
CATAACTACTGGAAGGTCAACCTCAAGGACGCCGACATCGCCTTCGCGAC
GGGGAATAACGCCACCGGAAACCACGACTTATTTTCGTGAGAGACCGAAG
CCTACTTGCTGTTGTGCCGCGTGTGGATCTCCACCCTGGATTCGACCTTT
CTGTTGCATAACTACTGGAAGGTCAACCTCAAGGACGCCGACATCGCCTT
CGCGACGGGGAATAACGCCACCGGAAACCACGACTTATTTTCGTGA
back to top