mRNA_L-elsbetiae_contig8768.17805.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8768.17805.1
Unique NamemRNA_L-elsbetiae_contig8768.17805.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5JXM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM3_9PHAE)

HSP 1 Score: 441 bits (1135), Expect = 1.750e-147
Identity = 284/475 (59.79%), Postives = 339/475 (71.37%), Query Frame = 1
Query:    1 MALDLSKSQKAPMLPLDFSEDLKYAMRVFCRCYGGKAMGQQALKLLSSVPLVHAALAVKEAGKMSSAQRDRAASKCMQEIAVPGWIKTIEELLSSMEREGERLAMPYKWKDMLYYTTLGTGMYPAKTYMQKPASVFNKFKAIKADFTKVWLWFDTHDKTDTPPELPSGTNTQDSLGELNEAMWLESDQYKREKARQDDADDVAVAGLSAGRANGADGEGA-AGSVDPAAGAGPAALAALAVRDMXXXXXXXXXXXXXXXXXXXXXXXXAA------------KMRREQE---EKDQNDGDEMPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGPPKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNE 1377
            MA+D  KSQKAPMLP++  ED  +A+R FC  YG K M Q ALK+L S+PLVH+ALAVKEA KMS+AQR+ AASKCMQEIAVPG+IK IE  LS+ME   +   MP+KWK M+YYTTLG+G   AKT+M+KP++V  KFK+ KA +T+VWLW DT+DK  TP ELPSGTNTQDSL ELN+AMW ESD YKR+KAR D A       LS G A   D  G+ AGS  P  GA             XXXXXXXXXXXXXXXXXXXXXXXX              +  REQ+   ++ +++G+E+P+ W FP+L+L A YSPWSG+APSEWKHL+SSDGP   KRK G+VT+D  NPVCSPAVMSRLNPNGDALSR               K    +  ++ R EAL+TKKKGL A+EAANTH+E+IGAN+KRMVELKE EA   KRE+KIKA+EKK+ML+LGD  ENRAEL  LLNE
Sbjct:  105 MAVDFPKSQKAPMLPINRPEDFMFALRKFCGTYGNKTMTQPALKMLPSIPLVHSALAVKEADKMSAAQRNLAASKCMQEIAVPGFIKLIEHALSTMEGPPQ---MPHKWKVMVYYTTLGSGTSKAKTFMEKPSTVLTKFKSYKAKYTRVWLWLDTNDKN-TPSELPSGTNTQDSLEELNDAMWFESDMYKRDKARSDKAGAEVADFLSRGAAGSVDAAGSPAGS--PVTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREQEREQDKGGDEGKHEGEEVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSI-KRKGGDVTVDSENPVCSPAVMSRLNPNGDALSRSSR----------RGKQRPTRNFQETRKEALKTKKKGLAALEAANTHIETIGANMKRMVELKEAEAVGIKRENKIKALEKKIMLRLGDETENRAELEFLLNE 562          
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: D7FV02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV02_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 2.650e-91
Identity = 208/495 (42.02%), Postives = 284/495 (57.37%), Query Frame = 1
Query:    1 MALDLSKSQKAPMLPLDFSEDLKYAMRVFCRCYGGKAMGQQALKLLSSVPLVHAALAVKEAGKMSSAQRDRAASKCMQEIAVPGWIKTIEELLSSMEREGERLAMPYKWKDMLYYTTLGTGMYPAKTYMQKPASVFNKFKAIKADFTK-VWLWFDTHDKTDTPPELPSGTNTQDSLGELNEAMWLESDQYKREKARQDDADD------------VAVAGLSAGRANGADGEGAAGSVDPAAGAGPAALAALAVRDMXXXXXXXXXXXXXXXXXXXXXXXXAAKMRREQEEKDQN-----------DGDE-MPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGP-----------PKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNE 1377
            MA++   S KAP L +D +ED+ +    +C  +GG+ M Q  LK L  VP+ HAALAVK+   M S  R+ A SK MQEIAVPGWIK  E  +   + E   L  P+ WKD LYYTTLGTG  P +T+M+ P ++F KFKA+K ++TK   LWFDTH ++ T  EL SGT T D+L +L+  M+ ++   K   A++D A D            V V+G++              +  P     P   A       XXXXXXXXXXXXXX          A  +RRE      +           +G+E +PD + +PYL+LA  +S WSG  PSEWKHL +S GP             G   S EV I   NP+ SP  M  +N NGDA+SRR++F  +K+EKE  +K A +KE    RNEAL+T+K+GL AME+ANTHV  + +N+K+MV+L+E+   A +R+DKI+A+E+KLML + D    +A+L  LL+E
Sbjct:    1 MAINFDISMKAPPLNIDLTEDMMWGFHRYCDKFGGRKMNQAGLKALQCVPIAHAALAVKQGEDMKSDVRNAAMSKRMQEIAVPGWIKVCEAAIKDSQGE---LVFPHGWKDALYYTTLGTGENPRQTFMKNPKALFTKFKALKTEYTKGAQLWFDTHPESST--ELNSGTQTTDALDDLSADMYRKA--TKGNAAKEDAAADIFFNTPRRSAEGVVVSGVT--------------TTSPL----PTPAADAXXXXXXXXXXXXXXXXXXXTSPQALARRAAEALRREMASPTASGSGSGANLGRPEGNEDIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKLMLAISDPNMVKAQLNALLDE 470          
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5K6E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E0_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 7.690e-75
Identity = 125/175 (71.43%), Postives = 149/175 (85.14%), Query Frame = 1
Query:  853 EMPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGPPKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNE 1377
            E+P+ W FP+L+L A YSPWSG+APSEWKHL+SSDGP   KRK G+VT+D  NPVCSPAVMSRLNPNGDALSRR+HF A+K+EKE ERK AADK L++A  EALETKKKGL A+EAA+TH+E+IGAN+KRMVELKE EA   KR+++IK +EKK+ML+LGD  ENRAEL  LLNE
Sbjct:   30 EVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSI-KRKGGDVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQERKKAADKRLQEAWKEALETKKKGLAALEAASTHIETIGANMKRMVELKEAEAVGIKRKNRIKVLEKKVMLRLGDETENRAELEFLLNE 203          
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5KJW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW8_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 1.840e-73
Identity = 172/297 (57.91%), Postives = 194/297 (65.32%), Query Frame = 1
Query:  544 MWLESDQYKREKARQDDADDVAVAGLSAGRANGADGEGA-AGSVDPAAGAG----------------PAALAALAVRDMXXXXXXXXXXXXXXXXXXXXXXXXAAKMRREQEEKDQNDGD-EMPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGPPKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNEC 1380
            MW ESD YKR+KAR D AD    A  S G A   D  G+ AGS  PA GAG                PAA AA A  ++             XXXXXXXXXXX                  E+P+ W FP+L+L A YSPWSGQAPSEWKHL+SSDG  K KR  G+VT+D  NPV SPAVMSRLNPNGDALSRR+HF A+K+EKE ERKAAADKEL+     ALETKK G  A+EAANTHV+SIGAN+KRMVELKE EA   KRE+KIKA+EK +ML+LGD  ENRAEL  LLNEC
Sbjct:    1 MWFESDMYKRDKARSDKADAEVAAFPSRGAAGSVDAAGSPAGS--PATGAGXXEXXXXXXXXPAGQGPAAQAASAETEVRQEPGSTPMSLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGLSK-KRTGGDVTVDSENPVYSPAVMSRLNPNGDALSRRQHFAAIKREKEEERKAAADKELQXXXXXALETKK-GPAALEAANTHVDSIGANMKRMVELKEAEAVGIKRENKIKALEKIIMLRLGDETENRAELEFLLNEC 293          
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5JTM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTM3_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 1.140e-71
Identity = 126/174 (72.41%), Postives = 148/174 (85.06%), Query Frame = 1
Query:  856 MPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGPPKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNE 1377
            +P+ W FP+L+L A YSPWSGQAPSEWKHL+SSDGP K KRK  +VT+D  NPVCSPAVMSRLNPNGDALSRR+HF A+K+EKE E KAAA+KEL++AR E LETKK GL A EAANTHVE+IGA++KRMVELKE EA   KRE+KIKA+EKK++L+LGD  ENRAEL+ LL E
Sbjct:  137 VPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSK-KRKGADVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQEMKAAAEKELQEARKEPLETKK-GLAAFEAANTHVETIGADMKRMVELKEAEAVGIKRENKIKALEKKIVLRLGDETENRAELVFLLIE 308          
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5K7S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7S4_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 1.730e-58
Identity = 144/296 (48.65%), Postives = 165/296 (55.74%), Query Frame = 1
Query:  544 MWLESDQYKREKARQDDADDVAVAGLSAGRANGADGEGA-AGSVDPAAGAGPAALAALAVRDMXXXXXXXXXXXXXXXXXXXXXXXXAAKMRREQEEKDQNDGD-------EMPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGPPKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKK----------KGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNE 1377
            MW ESD YKR KAR D A     A LS G A   D  G+ AGS  PA GAG          D                  X      AA + REQE               E+P+ W FP+L+L A YSPWSGQAPSEWKHL+SSDGP K KRK G+VT+D  NPVCSPA                           ERKAA DKEL++AR EALETKK          KGL A+EAANTH+E+IGAN+KRMVELK+ EA   KRE+KIKA+EK++ML+LGD  ENRAEL  L NE
Sbjct:    1 MWFESDMYKRNKARSDKAGAEVAAFLSRGAAGSVDAAGSPAGS--PATGAGTGESV-----DRAGSPPAGPVVVEAPRLFXPMSLAAAANIGREQERXXXXXXXXXXXXXXEVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSK-KRKGGDVTVDSENPVCSPA---------------------------ERKAATDKELQEARKEALETKKXXXXXXXXXKKGLAALEAANTHIETIGANMKRMVELKQAEAVGIKRENKIKALEKRIMLRLGDETENRAELEFLPNE 261          
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5KGF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF1_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 4.860e-58
Identity = 128/250 (51.20%), Postives = 150/250 (60.00%), Query Frame = 1
Query:  544 MWLESDQYKREKARQDDADDVAVAGLSAGRANGAD-----------GEGAAGSVD----PAAGAGPAALAALAVRDMXXXXXXXXXXXXXXXXXXXXXXXXAAKMRREQEEKDQNDGD-------EMPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGPPKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIG 1227
            MW ESD YKR+KAR D AD   VA LS G A   D           G G   SVD    P+AG GPA  A LA  ++                        AA +RR                  E+P+ W FP+L+L A YSPWSGQAPSEWKHL+SSDGP K KRK G+V +D  NPVCSPAVMSRL+PNGDALSRR+HF A+K+EKE ERKA ADKEL+++R E LETKKKGL A+EAANT+  + G
Sbjct:    1 MWFESDMYKRDKARLDKADAEVVAFLSRGAAGSVDAAGSLAGSPATGAGGGESVDRAGSPSAGQGPAEQATLAETEVRQEPGSTPMSLAATA---------AANIRRXXXXXXXXXXXXXXXXXXEVPEWWIFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSK-KRKGGDVNVDSENPVCSPAVMSRLDPNGDALSRRQHFAAIKREKEQERKATADKELQESRKETLETKKKGLAALEAANTNYAASG 240          
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5KE63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE63_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 1.280e-42
Identity = 89/135 (65.93%), Postives = 102/135 (75.56%), Query Frame = 1
Query:  973 KRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNE 1377
            KRK G+VT+D  NPVCSPAVMSRLNPNGDALSRR+HF A+K+E+E ERKAAADKE                   +AANTHVE+IGAN+KRMVELKE EA   KRE+KIKA+EKK+ L+LGD  ENRAEL  LLNE
Sbjct:   48 KRKGGDVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREQEHERKAAADKE-------------------QAANTHVETIGANMKRMVELKEAEAVGIKRENKIKALEKKIRLRLGDGTENRAELEFLLNE 163          
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5KFH5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFH5_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 4.720e-42
Identity = 81/123 (65.85%), Postives = 97/123 (78.86%), Query Frame = 1
Query:    1 MALDLSKSQKAPMLPLDFSEDLKYAMRVFCRCYGGKAMGQQALKLLSSVPLVHAALAVKEAGKMSSAQRDRAASKCMQEIAVPGWIKTIEELLSSMEREGERLAMPYKWKDMLYYTTLGTGMY 369
            MA+D  KSQKAPMLP++ SED  +A+R FC  YG K M Q ALK+L S+PLVH+ALAVKEA KMS+AQR+ AASKCMQEIAVPG+IK IE  LS M   G  L MP+KWK M+YYT+LG+G+Y
Sbjct:    1 MAVDFPKSQKAPMLPINLSEDFMFALRKFCGTYGNKTMTQPALKMLQSIPLVHSALAVKEADKMSAAQRNLAASKCMQEIAVPGFIKLIEHALSIM---GGPLQMPHKWKVMVYYTSLGSGVY 120          
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5JUT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT5_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.610e-30
Identity = 68/108 (62.96%), Postives = 82/108 (75.93%), Query Frame = 1
Query:    1 MALDLSKSQKAPMLPLDFSEDLKYAMRVFCRCYGGKAMGQQALKLLSSVPLVHAALAVKEAGKMSSAQRDRAASKCMQEIAVPGWIKTIEELLSSMEREGERLAMPYK 324
            MA+D +KSQKAPMLP+D SED  +A+R FC  YG K M Q ALK+L  +P VH+ALAVKEA KMS+AQR+ AASKCMQEIAVPG+ K IE  LS+M+     L MP+K
Sbjct:    1 MAVDFAKSQKAPMLPIDLSEDFMFALRKFCGTYGNKTMTQPALKMLQPIPRVHSALAVKEADKMSAAQRNLAASKCMQEIAVPGF-KLIEHALSTMDGP---LQMPHK 104          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5JXM3_9PHAE1.750e-14759.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV02_ECTSI2.650e-9142.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6E0_9PHAE7.690e-7571.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJW8_9PHAE1.840e-7357.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTM3_9PHAE1.140e-7172.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7S4_9PHAE1.730e-5848.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGF1_9PHAE4.860e-5851.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE63_9PHAE1.280e-4265.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFH5_9PHAE4.720e-4265.85Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUT5_9PHAE1.610e-3062.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8768contigL-elsbetiae_contig8768:73..2879 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-00_003920.1
Exons3
Model size1408
Cds size1383
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8768.17805.1prot_L-elsbetiae_contig8768.17805.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8768 73..2854 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816956.5140653-CDS-L-elsbetiae_contig8768:72..4441622816956.5140653-CDS-L-elsbetiae_contig8768:72..444Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8768 73..444 +
1691683940.0774531-CDS-L-elsbetiae_contig8768:72..4441691683940.0774531-CDS-L-elsbetiae_contig8768:72..444Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8768 73..444 +
1622816956.526565-CDS-L-elsbetiae_contig8768:1185..12771622816956.526565-CDS-L-elsbetiae_contig8768:1185..1277Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8768 1186..1277 +
1691683940.0897727-CDS-L-elsbetiae_contig8768:1185..12771691683940.0897727-CDS-L-elsbetiae_contig8768:1185..1277Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8768 1186..1277 +
1622816956.538538-CDS-L-elsbetiae_contig8768:1935..28541622816956.538538-CDS-L-elsbetiae_contig8768:1935..2854Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8768 1936..2854 +
1691683940.1058238-CDS-L-elsbetiae_contig8768:1935..28541691683940.1058238-CDS-L-elsbetiae_contig8768:1935..2854Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8768 1936..2854 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816956.5494893-UTR-L-elsbetiae_contig8768:2854..28791622816956.5494893-UTR-L-elsbetiae_contig8768:2854..2879Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8768 2855..2879 +
1691683940.1152437-UTR-L-elsbetiae_contig8768:2854..28791691683940.1152437-UTR-L-elsbetiae_contig8768:2854..2879Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8768 2855..2879 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8768.17805.1

>prot_L-elsbetiae_contig8768.17805.1 ID=prot_L-elsbetiae_contig8768.17805.1|Name=mRNA_L-elsbetiae_contig8768.17805.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=461bp
MALDLSKSQKAPMLPLDFSEDLKYAMRVFCRCYGGKAMGQQALKLLSSVP
LVHAALAVKEAGKMSSAQRDRAASKCMQEIAVPGWIKTIEELLSSMEREG
ERLAMPYKWKDMLYYTTLGTGMYPAKTYMQKPASVFNKFKAIKADFTKVW
LWFDTHDKTDTPPELPSGTNTQDSLGELNEAMWLESDQYKREKARQDDAD
DVAVAGLSAGRANGADGEGAAGSVDPAAGAGPAALAALAVRDMNGGGAAG
SGDPAAEEGPAAIAALAAAKMRREQEEKDQNDGDEMPDSWCFPYLILAAV
YSPWSGQAPSEWKHLESSDGPPKGKRKSGEVTIDGANPVCSPAVMSRLNP
NGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEA
ANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENR
AELLRLLNEC*
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mRNA from alignment at L-elsbetiae_contig8768:73..2879+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8768.17805.1 ID=mRNA_L-elsbetiae_contig8768.17805.1|Name=mRNA_L-elsbetiae_contig8768.17805.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2807bp|location=Sequence derived from alignment at L-elsbetiae_contig8768:73..2879+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGCTCGACCTTTCGAAGTCACAGAAGGCGCCGATGCTTCCCCTTGA CTTCTCTGAAGACCTCAAGTACGCGATGCGCGTGTTCTGCCGCTGCTACG GGGGCAAGGCCATGGGCCAGCAAGCCCTGAAGCTCCTCTCGTCAGTACCA CTCGTTCACGCTGCTCTAGCTGTGAAGGAGGCGGGCAAGATGAGCTCAGC GCAACGCGACCGGGCGGCGTCGAAGTGCATGCAAGAGATTGCGGTTCCTG GGTGGATCAAGACCATCGAAGAGCTGCTGTCGTCGATGGAGCGGGAGGGT GAGCGGCTGGCGATGCCTTACAAGTGGAAGGACATGCTGTACTACACGAC CCTCGGCACAGGTATGTATCCAGTGTCTCTGCATGGTTTGATTTTATGTA CCGAAAGACGCACGTAGGTGCTGGTTGGGTATGCAGGACCATCACGTGCA AAGTTGACGTACACACATACATATCTTGTAGGGCAACGGCCCTCGCCCCA CCGCATAAGCGTGTATCTACGGAGTGTCTGTGCATCGTTTCCGAATACCT ACCCGAAGACTCATGTTCACTGCTGGTTGTGCCATGGTAGTCACGATCAT GATGTGCAATCGCAAAAAAAACCCGTCTATATCCTACATACATGTAGATA TATATTTTTTAATTTTTCGTCTACGTATGTAGACTATGTACGTCTGGATA TGTACATGCATGTATTGTAGTCAACGCCCCGTCGCAGCCGAGCAATTTAT GTTCCCCATTCCCATATCGAGATGAATATTTTGGAAGAGGCTTTTCTTGG GCGGTGGACTCGCCCTTGCGCTGGTTGTGTTCAAGCACACAAACTTTACA CAGCAGTACAATGTAGCAGAGCAGCGACAGCAGCAGCTACAGCAGCAGCT ACAAGCAGCAGCTTACAGCTGTCGCCCAAATCAGGCGTAAGGAGGCTGAT GACAGGCTCCCACTGCTATGTTTCCCCCTGCTTCGGCAAAGAGTGTACGC AGCCCGTTTGTGATAGCATGACCACGTACAAGGTGCTGCACCTTTTTCGC CAAAAAATATGACTTTTCCCAAACGCGACGACGTCGTTTTCGTGCATCGC AGGCAAGTCAGAGGCGAAGACCTATATGCAGAAGCCGGCGAGCGTCTTCA ACAAGTTCAAGGCCATCAAGGCGGACTTCACAAAAGTGTGGCTCTGGTTC GACACGTGAGTACCTCAGTTGTTTTTCTACTTTTCTAAGAAGCCGCCACC TGTTCGCGGCATGCTTCCCCACCGTCGTCGCACACTCGTCCAGCGAGTGT TGGGGAGGCACAACGTGCAAGCCGAGTTGTTCTATGGGAAAACAGCAGTA GTGCCTCCGTGTGTTTGATCGTCGGGGTTGGTGCCCTAGAATTTTAGAGC TATGTTGACGACAAGGTTAAGCTTGCGTGCGCCTGTCTGTCGTACGTACA ATCCTCCTTTCTAGCGTGGTGAGGCTTAAAACTCTAGGATAGGTTTGGAA TATAATAGCCACCCGACCACACGGGGGCAGGCATGAACCAATTAGTAGTG GGTGTGTTTTCTACCCTCCGAAATTCTAATTCCGTGTTCCATAACACTAA AAATCAAACAAACACGCTTGGTACAATACCTCGTGGCCAAGATAAAATAC CTAGTAGCCAAAAACAAATCCAGAATAGACTACATAGAAGTTACAAAGAC TTCGAATGCACAGCAGGACAGTTTCATCGCAAGTTGACAAATAAGTGCTT GAACCTTGCACCTTGCCGTGTACCATTGCCGTTTGTTCGTCTCGCATTTT ACCGAGCTGACCGACTAATTCATGCCGTACCCTTGCCGTACCCCATGCGT TTTTTTGTGTCAGGCACGACAAGACTGACACCCCGCCGGAGCTGCCATCT GGGACCAACACCCAGGACTCCCTGGGTGAGCTCAACGAAGCCATGTGGCT CGAATCGGACCAGTACAAGCGGGAGAAGGCTAGGCAGGACGACGCGGACG ACGTCGCAGTCGCGGGGTTATCTGCGGGGCGGGCCAACGGCGCCGACGGG GAGGGCGCGGCGGGGAGCGTCGACCCCGCTGCCGGGGCGGGACCAGCGGC GCTAGCGGCGTTGGCTGTCAGGGACATGAACGGGGGGGGCGCGGCGGGGA GCGGCGACCCCGCTGCCGAGGAGGGGCCGGCGGCGATAGCGGCGTTGGCT GCCGCGAAAATGCGCCGGGAGCAGGAGGAGAAGGACCAGAACGACGGGGA CGAGATGCCTGATAGTTGGTGCTTCCCCTACCTAATCCTCGCGGCGGTGT ACAGCCCGTGGAGCGGCCAGGCCCCCTCGGAGTGGAAGCACCTCGAGTCT TCGGACGGGCCGCCCAAGGGAAAGCGGAAGAGCGGGGAGGTGACGATTGA CGGCGCCAACCCCGTCTGCAGCCCCGCGGTGATGTCCCGCCTCAACCCTA ACGGCGACGCTTTGAGCCGCCGCGAACACTTCAAGGCCGTCAAGCAAGAG AAGGAGGCGGAGAGGAAAGCAGCTGCCGACAAGGAGCTCAAGGACGCCAG GAACGAAGCGCTTGAGACGAAGAAGAAGGGCCTGATCGCGATGGAAGCTG CGAACACTCATGTCGAGAGCATCGGCGCCAACCTGAAGAGGATGGTCGAG CTCAAGGAGCAGGAGGCCGCCGCCAAGAAGCGAGAGGACAAGATTAAGGC GGTGGAGAAAAAGTTGATGCTGCAGCTTGGAGACGCAGCAGAGAACCGGG CAGAGCTTCTCCGCCTCCTTAACGAGTGCTAGCGTGTGGCTGATTTGTAC CACCGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8768:73..2879+

>mRNA_L-elsbetiae_contig8768.17805.1 ID=mRNA_L-elsbetiae_contig8768.17805.1|Name=mRNA_L-elsbetiae_contig8768.17805.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2766bp|location=Sequence derived from alignment at L-elsbetiae_contig8768:73..2879+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGCTCGACCTTTCGAAGTCACAGAAGGCGCCGATGCTTCCCCTTGA
CTTCTCTGAAGACCTCAAGTACGCGATGCGCGTGTTCTGCCGCTGCTACG
GGGGCAAGGCCATGGGCCAGCAAGCCCTGAAGCTCCTCTCGTCAGTACCA
CTCGTTCACGCTGCTCTAGCTGTGAAGGAGGCGGGCAAGATGAGCTCAGC
GCAACGCGACCGGGCGGCGTCGAAGTGCATGCAAGAGATTGCGGTTCCTG
GGTGGATCAAGACCATCGAAGAGCTGCTGTCGTCGATGGAGCGGGAGGGT
GAGCGGCTGGCGATGCCTTACAAGTGGAAGGACATGCTGTACTACACGAC
CCTCGGCACAGGTATGTATCCAATGGCGCTCGACCTTTCGAAGTCACAGA
AGGCGCCGATGCTTCCCCTTGACTTCTCTGAAGACCTCAAGTACGCGATG
CGCGTGTTCTGCCGCTGCTACGGGGGCAAGGCCATGGGCCAGCAAGCCCT
GAAGCTCCTCTCGTCAGTACCACTCGTTCACGCTGCTCTAGCTGTGAAGG
AGGCGGGCAAGATGAGCTCAGCGCAACGCGACCGGGCGGCGTCGAAGTGC
ATGCAAGAGATTGCGGTTCCTGGGTGGATCAAGACCATCGAAGAGCTGCT
GTCGTCGATGGAGCGGGAGGGTGAGCGGCTGGCGATGCCTTACAAGTGGA
AGGACATGCTGTACTACACGACCCTCGGCACAGGTATGTATCCAGCGAAG
ACCTATATGCAGAAGCCGGCGAGCGTCTTCAACAAGTTCAAGGCCATCAA
GGCGGACTTCACAAAAGTGTGGCTCTGGTTCGACACGCGAAGACCTATAT
GCAGAAGCCGGCGAGCGTCTTCAACAAGTTCAAGGCCATCAAGGCGGACT
TCACAAAAGTGTGGCTCTGGTTCGACACGCACGACAAGACTGACACCCCG
CCGGAGCTGCCATCTGGGACCAACACCCAGGACTCCCTGGGTGAGCTCAA
CGAAGCCATGTGGCTCGAATCGGACCAGTACAAGCGGGAGAAGGCTAGGC
AGGACGACGCGGACGACGTCGCAGTCGCGGGGTTATCTGCGGGGCGGGCC
AACGGCGCCGACGGGGAGGGCGCGGCGGGGAGCGTCGACCCCGCTGCCGG
GGCGGGACCAGCGGCGCTAGCGGCGTTGGCTGTCAGGGACATGAACGGGG
GGGGCGCGGCGGGGAGCGGCGACCCCGCTGCCGAGGAGGGGCCGGCGGCG
ATAGCGGCGTTGGCTGCCGCGAAAATGCGCCGGGAGCAGGAGGAGAAGGA
CCAGAACGACGGGGACGAGATGCCTGATAGTTGGTGCTTCCCCTACCTAA
TCCTCGCGGCGGTGTACAGCCCGTGGAGCGGCCAGGCCCCCTCGGAGTGG
AAGCACCTCGAGTCTTCGGACGGGCCGCCCAAGGGAAAGCGGAAGAGCGG
GGAGGTGACGATTGACGGCGCCAACCCCGTCTGCAGCCCCGCGGTGATGT
CCCGCCTCAACCCTAACGGCGACGCTTTGAGCCGCCGCGAACACTTCAAG
GCCGTCAAGCAAGAGAAGGAGGCGGAGAGGAAAGCAGCTGCCGACAAGGA
GCTCAAGGACGCCAGGAACGAAGCGCTTGAGACGAAGAAGAAGGGCCTGA
TCGCGATGGAAGCTGCGAACACTCATGTCGAGAGCATCGGCGCCAACCTG
AAGAGGATGGTCGAGCTCAAGGAGCAGGAGGCCGCCGCCAAGAAGCGAGA
GGACAAGATTAAGGCGGTGGAGAAAAAGTTGATGCTGCAGCTTGGAGACG
CAGCAGAGAACCGGGCAGAGCTTCTCCGCCTCCTTAACGAGTGCTAGGCA
CGACAAGACTGACACCCCGCCGGAGCTGCCATCTGGGACCAACACCCAGG
ACTCCCTGGGTGAGCTCAACGAAGCCATGTGGCTCGAATCGGACCAGTAC
AAGCGGGAGAAGGCTAGGCAGGACGACGCGGACGACGTCGCAGTCGCGGG
GTTATCTGCGGGGCGGGCCAACGGCGCCGACGGGGAGGGCGCGGCGGGGA
GCGTCGACCCCGCTGCCGGGGCGGGACCAGCGGCGCTAGCGGCGTTGGCT
GTCAGGGACATGAACGGGGGGGGCGCGGCGGGGAGCGGCGACCCCGCTGC
CGAGGAGGGGCCGGCGGCGATAGCGGCGTTGGCTGCCGCGAAAATGCGCC
GGGAGCAGGAGGAGAAGGACCAGAACGACGGGGACGAGATGCCTGATAGT
TGGTGCTTCCCCTACCTAATCCTCGCGGCGGTGTACAGCCCGTGGAGCGG
CCAGGCCCCCTCGGAGTGGAAGCACCTCGAGTCTTCGGACGGGCCGCCCA
AGGGAAAGCGGAAGAGCGGGGAGGTGACGATTGACGGCGCCAACCCCGTC
TGCAGCCCCGCGGTGATGTCCCGCCTCAACCCTAACGGCGACGCTTTGAG
CCGCCGCGAACACTTCAAGGCCGTCAAGCAAGAGAAGGAGGCGGAGAGGA
AAGCAGCTGCCGACAAGGAGCTCAAGGACGCCAGGAACGAAGCGCTTGAG
ACGAAGAAGAAGGGCCTGATCGCGATGGAAGCTGCGAACACTCATGTCGA
GAGCATCGGCGCCAACCTGAAGAGGATGGTCGAGCTCAAGGAGCAGGAGG
CCGCCGCCAAGAAGCGAGAGGACAAGATTAAGGCGGTGGAGAAAAAGTTG
ATGCTGCAGCTTGGAGACGCAGCAGAGAACCGGGCAGAGCTTCTCCGCCT
CCTTAACGAGTGCTAG
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