mRNA_L-elsbetiae_contig8768.17805.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5JXM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM3_9PHAE) HSP 1 Score: 441 bits (1135), Expect = 1.750e-147 Identity = 284/475 (59.79%), Postives = 339/475 (71.37%), Query Frame = 1 Query: 1 MALDLSKSQKAPMLPLDFSEDLKYAMRVFCRCYGGKAMGQQALKLLSSVPLVHAALAVKEAGKMSSAQRDRAASKCMQEIAVPGWIKTIEELLSSMEREGERLAMPYKWKDMLYYTTLGTGMYPAKTYMQKPASVFNKFKAIKADFTKVWLWFDTHDKTDTPPELPSGTNTQDSLGELNEAMWLESDQYKREKARQDDADDVAVAGLSAGRANGADGEGA-AGSVDPAAGAGPAALAALAVRDMXXXXXXXXXXXXXXXXXXXXXXXXAA------------KMRREQE---EKDQNDGDEMPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGPPKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNE 1377 MA+D KSQKAPMLP++ ED +A+R FC YG K M Q ALK+L S+PLVH+ALAVKEA KMS+AQR+ AASKCMQEIAVPG+IK IE LS+ME + MP+KWK M+YYTTLG+G AKT+M+KP++V KFK+ KA +T+VWLW DT+DK TP ELPSGTNTQDSL ELN+AMW ESD YKR+KAR D A LS G A D G+ AGS P GA XXXXXXXXXXXXXXXXXXXXXXXX + REQ+ ++ +++G+E+P+ W FP+L+L A YSPWSG+APSEWKHL+SSDGP KRK G+VT+D NPVCSPAVMSRLNPNGDALSR K + ++ R EAL+TKKKGL A+EAANTH+E+IGAN+KRMVELKE EA KRE+KIKA+EKK+ML+LGD ENRAEL LLNE Sbjct: 105 MAVDFPKSQKAPMLPINRPEDFMFALRKFCGTYGNKTMTQPALKMLPSIPLVHSALAVKEADKMSAAQRNLAASKCMQEIAVPGFIKLIEHALSTMEGPPQ---MPHKWKVMVYYTTLGSGTSKAKTFMEKPSTVLTKFKSYKAKYTRVWLWLDTNDKN-TPSELPSGTNTQDSLEELNDAMWFESDMYKRDKARSDKAGAEVADFLSRGAAGSVDAAGSPAGS--PVTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREQEREQDKGGDEGKHEGEEVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSI-KRKGGDVTVDSENPVCSPAVMSRLNPNGDALSRSSR----------RGKQRPTRNFQETRKEALKTKKKGLAALEAANTHIETIGANMKRMVELKEAEAVGIKRENKIKALEKKIMLRLGDETENRAELEFLLNE 562
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: D7FV02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV02_ECTSI) HSP 1 Score: 294 bits (753), Expect = 2.650e-91 Identity = 208/495 (42.02%), Postives = 284/495 (57.37%), Query Frame = 1 Query: 1 MALDLSKSQKAPMLPLDFSEDLKYAMRVFCRCYGGKAMGQQALKLLSSVPLVHAALAVKEAGKMSSAQRDRAASKCMQEIAVPGWIKTIEELLSSMEREGERLAMPYKWKDMLYYTTLGTGMYPAKTYMQKPASVFNKFKAIKADFTK-VWLWFDTHDKTDTPPELPSGTNTQDSLGELNEAMWLESDQYKREKARQDDADD------------VAVAGLSAGRANGADGEGAAGSVDPAAGAGPAALAALAVRDMXXXXXXXXXXXXXXXXXXXXXXXXAAKMRREQEEKDQN-----------DGDE-MPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGP-----------PKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNE 1377 MA++ S KAP L +D +ED+ + +C +GG+ M Q LK L VP+ HAALAVK+ M S R+ A SK MQEIAVPGWIK E + + E L P+ WKD LYYTTLGTG P +T+M+ P ++F KFKA+K ++TK LWFDTH ++ T EL SGT T D+L +L+ M+ ++ K A++D A D V V+G++ + P P A XXXXXXXXXXXXXX A +RRE + +G+E +PD + +PYL+LA +S WSG PSEWKHL +S GP G S EV I NP+ SP M +N NGDA+SRR++F +K+EKE +K A +KE RNEAL+T+K+GL AME+ANTHV + +N+K+MV+L+E+ A +R+DKI+A+E+KLML + D +A+L LL+E Sbjct: 1 MAINFDISMKAPPLNIDLTEDMMWGFHRYCDKFGGRKMNQAGLKALQCVPIAHAALAVKQGEDMKSDVRNAAMSKRMQEIAVPGWIKVCEAAIKDSQGE---LVFPHGWKDALYYTTLGTGENPRQTFMKNPKALFTKFKALKTEYTKGAQLWFDTHPESST--ELNSGTQTTDALDDLSADMYRKA--TKGNAAKEDAAADIFFNTPRRSAEGVVVSGVT--------------TTSPL----PTPAADAXXXXXXXXXXXXXXXXXXXTSPQALARRAAEALRREMASPTASGSGSGANLGRPEGNEDIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKLMLAISDPNMVKAQLNALLDE 470
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5K6E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E0_9PHAE) HSP 1 Score: 243 bits (620), Expect = 7.690e-75 Identity = 125/175 (71.43%), Postives = 149/175 (85.14%), Query Frame = 1 Query: 853 EMPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGPPKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNE 1377 E+P+ W FP+L+L A YSPWSG+APSEWKHL+SSDGP KRK G+VT+D NPVCSPAVMSRLNPNGDALSRR+HF A+K+EKE ERK AADK L++A EALETKKKGL A+EAA+TH+E+IGAN+KRMVELKE EA KR+++IK +EKK+ML+LGD ENRAEL LLNE Sbjct: 30 EVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSI-KRKGGDVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQERKKAADKRLQEAWKEALETKKKGLAALEAASTHIETIGANMKRMVELKEAEAVGIKRKNRIKVLEKKVMLRLGDETENRAELEFLLNE 203
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5KJW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW8_9PHAE) HSP 1 Score: 242 bits (618), Expect = 1.840e-73 Identity = 172/297 (57.91%), Postives = 194/297 (65.32%), Query Frame = 1 Query: 544 MWLESDQYKREKARQDDADDVAVAGLSAGRANGADGEGA-AGSVDPAAGAG----------------PAALAALAVRDMXXXXXXXXXXXXXXXXXXXXXXXXAAKMRREQEEKDQNDGD-EMPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGPPKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNEC 1380 MW ESD YKR+KAR D AD A S G A D G+ AGS PA GAG PAA AA A ++ XXXXXXXXXXX E+P+ W FP+L+L A YSPWSGQAPSEWKHL+SSDG K KR G+VT+D NPV SPAVMSRLNPNGDALSRR+HF A+K+EKE ERKAAADKEL+ ALETKK G A+EAANTHV+SIGAN+KRMVELKE EA KRE+KIKA+EK +ML+LGD ENRAEL LLNEC Sbjct: 1 MWFESDMYKRDKARSDKADAEVAAFPSRGAAGSVDAAGSPAGS--PATGAGXXEXXXXXXXXPAGQGPAAQAASAETEVRQEPGSTPMSLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGLSK-KRTGGDVTVDSENPVYSPAVMSRLNPNGDALSRRQHFAAIKREKEEERKAAADKELQXXXXXALETKK-GPAALEAANTHVDSIGANMKRMVELKEAEAVGIKRENKIKALEKIIMLRLGDETENRAELEFLLNEC 293
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5JTM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTM3_9PHAE) HSP 1 Score: 239 bits (610), Expect = 1.140e-71 Identity = 126/174 (72.41%), Postives = 148/174 (85.06%), Query Frame = 1 Query: 856 MPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGPPKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNE 1377 +P+ W FP+L+L A YSPWSGQAPSEWKHL+SSDGP K KRK +VT+D NPVCSPAVMSRLNPNGDALSRR+HF A+K+EKE E KAAA+KEL++AR E LETKK GL A EAANTHVE+IGA++KRMVELKE EA KRE+KIKA+EKK++L+LGD ENRAEL+ LL E Sbjct: 137 VPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSK-KRKGADVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQEMKAAAEKELQEARKEPLETKK-GLAAFEAANTHVETIGADMKRMVELKEAEAVGIKRENKIKALEKKIVLRLGDETENRAELVFLLIE 308
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5K7S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7S4_9PHAE) HSP 1 Score: 204 bits (519), Expect = 1.730e-58 Identity = 144/296 (48.65%), Postives = 165/296 (55.74%), Query Frame = 1 Query: 544 MWLESDQYKREKARQDDADDVAVAGLSAGRANGADGEGA-AGSVDPAAGAGPAALAALAVRDMXXXXXXXXXXXXXXXXXXXXXXXXAAKMRREQEEKDQNDGD-------EMPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGPPKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKK----------KGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNE 1377 MW ESD YKR KAR D A A LS G A D G+ AGS PA GAG D X AA + REQE E+P+ W FP+L+L A YSPWSGQAPSEWKHL+SSDGP K KRK G+VT+D NPVCSPA ERKAA DKEL++AR EALETKK KGL A+EAANTH+E+IGAN+KRMVELK+ EA KRE+KIKA+EK++ML+LGD ENRAEL L NE Sbjct: 1 MWFESDMYKRNKARSDKAGAEVAAFLSRGAAGSVDAAGSPAGS--PATGAGTGESV-----DRAGSPPAGPVVVEAPRLFXPMSLAAAANIGREQERXXXXXXXXXXXXXXEVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSK-KRKGGDVTVDSENPVCSPA---------------------------ERKAATDKELQEARKEALETKKXXXXXXXXXKKGLAALEAANTHIETIGANMKRMVELKQAEAVGIKRENKIKALEKRIMLRLGDETENRAELEFLPNE 261
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5KGF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF1_9PHAE) HSP 1 Score: 201 bits (511), Expect = 4.860e-58 Identity = 128/250 (51.20%), Postives = 150/250 (60.00%), Query Frame = 1 Query: 544 MWLESDQYKREKARQDDADDVAVAGLSAGRANGAD-----------GEGAAGSVD----PAAGAGPAALAALAVRDMXXXXXXXXXXXXXXXXXXXXXXXXAAKMRREQEEKDQNDGD-------EMPDSWCFPYLILAAVYSPWSGQAPSEWKHLESSDGPPKGKRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIG 1227 MW ESD YKR+KAR D AD VA LS G A D G G SVD P+AG GPA A LA ++ AA +RR E+P+ W FP+L+L A YSPWSGQAPSEWKHL+SSDGP K KRK G+V +D NPVCSPAVMSRL+PNGDALSRR+HF A+K+EKE ERKA ADKEL+++R E LETKKKGL A+EAANT+ + G Sbjct: 1 MWFESDMYKRDKARLDKADAEVVAFLSRGAAGSVDAAGSLAGSPATGAGGGESVDRAGSPSAGQGPAEQATLAETEVRQEPGSTPMSLAATA---------AANIRRXXXXXXXXXXXXXXXXXXEVPEWWIFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSK-KRKGGDVNVDSENPVCSPAVMSRLDPNGDALSRRQHFAAIKREKEQERKATADKELQESRKETLETKKKGLAALEAANTNYAASG 240
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5KE63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE63_9PHAE) HSP 1 Score: 157 bits (398), Expect = 1.280e-42 Identity = 89/135 (65.93%), Postives = 102/135 (75.56%), Query Frame = 1 Query: 973 KRKSGEVTIDGANPVCSPAVMSRLNPNGDALSRREHFKAVKQEKEAERKAAADKELKDARNEALETKKKGLIAMEAANTHVESIGANLKRMVELKEQEAAAKKREDKIKAVEKKLMLQLGDAAENRAELLRLLNE 1377 KRK G+VT+D NPVCSPAVMSRLNPNGDALSRR+HF A+K+E+E ERKAAADKE +AANTHVE+IGAN+KRMVELKE EA KRE+KIKA+EKK+ L+LGD ENRAEL LLNE Sbjct: 48 KRKGGDVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREQEHERKAAADKE-------------------QAANTHVETIGANMKRMVELKEAEAVGIKRENKIKALEKKIRLRLGDGTENRAELEFLLNE 163
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5KFH5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFH5_9PHAE) HSP 1 Score: 155 bits (392), Expect = 4.720e-42 Identity = 81/123 (65.85%), Postives = 97/123 (78.86%), Query Frame = 1 Query: 1 MALDLSKSQKAPMLPLDFSEDLKYAMRVFCRCYGGKAMGQQALKLLSSVPLVHAALAVKEAGKMSSAQRDRAASKCMQEIAVPGWIKTIEELLSSMEREGERLAMPYKWKDMLYYTTLGTGMY 369 MA+D KSQKAPMLP++ SED +A+R FC YG K M Q ALK+L S+PLVH+ALAVKEA KMS+AQR+ AASKCMQEIAVPG+IK IE LS M G L MP+KWK M+YYT+LG+G+Y Sbjct: 1 MAVDFPKSQKAPMLPINLSEDFMFALRKFCGTYGNKTMTQPALKMLQSIPLVHSALAVKEADKMSAAQRNLAASKCMQEIAVPGFIKLIEHALSIM---GGPLQMPHKWKVMVYYTSLGSGVY 120
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Match: A0A6H5JUT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT5_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.610e-30 Identity = 68/108 (62.96%), Postives = 82/108 (75.93%), Query Frame = 1 Query: 1 MALDLSKSQKAPMLPLDFSEDLKYAMRVFCRCYGGKAMGQQALKLLSSVPLVHAALAVKEAGKMSSAQRDRAASKCMQEIAVPGWIKTIEELLSSMEREGERLAMPYK 324 MA+D +KSQKAPMLP+D SED +A+R FC YG K M Q ALK+L +P VH+ALAVKEA KMS+AQR+ AASKCMQEIAVPG+ K IE LS+M+ L MP+K Sbjct: 1 MAVDFAKSQKAPMLPIDLSEDFMFALRKFCGTYGNKTMTQPALKMLQPIPRVHSALAVKEADKMSAAQRNLAASKCMQEIAVPGF-KLIEHALSTMDGP---LQMPHK 104 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8768.17805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8768.17805.1 >prot_L-elsbetiae_contig8768.17805.1 ID=prot_L-elsbetiae_contig8768.17805.1|Name=mRNA_L-elsbetiae_contig8768.17805.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=461bp MALDLSKSQKAPMLPLDFSEDLKYAMRVFCRCYGGKAMGQQALKLLSSVPback to top mRNA from alignment at L-elsbetiae_contig8768:73..2879+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8768.17805.1 ID=mRNA_L-elsbetiae_contig8768.17805.1|Name=mRNA_L-elsbetiae_contig8768.17805.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2807bp|location=Sequence derived from alignment at L-elsbetiae_contig8768:73..2879+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8768:73..2879+ >mRNA_L-elsbetiae_contig8768.17805.1 ID=mRNA_L-elsbetiae_contig8768.17805.1|Name=mRNA_L-elsbetiae_contig8768.17805.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2766bp|location=Sequence derived from alignment at L-elsbetiae_contig8768:73..2879+ (Laminarionema elsbetiae ELsaHSoW15)back to top |