mRNA_L-elsbetiae_contig8756.17792.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8756.17792.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI) HSP 1 Score: 357 bits (916), Expect = 4.200e-123 Identity = 174/220 (79.09%), Postives = 192/220 (87.27%), Query Frame = 1 Query: 49 MVKYTAVFALASALYASCADAKEFKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTMEVDETVCPDPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKVFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPGEGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFIAAQ 708 MVK+TA FALAS L S A A +FKVRVRNLTY QPFSP L+VAHTNDVALFKEG PASDAIKLMAEDG+NS LLELA S DVAPYICGAVA +GPVFPGETWRGT+ +DE+ CPDP YSVV+MLI+TNDAF+GIDSD LN+ G+ KVFPPAFDAGTEANNELC+HIPGPAC +SGNM+D PGE FIH+HRGFHGVG +L EA YDWRNPVAEVFIA Q Sbjct: 1 MVKFTAGFALASVL--SLAHATDFKVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIARQ 218
BLAST of mRNA_L-elsbetiae_contig8756.17792.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI) HSP 1 Score: 325 bits (832), Expect = 3.080e-110 Identity = 158/222 (71.17%), Postives = 184/222 (82.88%), Query Frame = 1 Query: 49 MVKYTAVFALASALYASCADAKE-----FKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTMEVDETVCPDPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKVFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPGEGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFI 699 MV +TA FA+AS + + A K+ FKVRVRNLTY QPFSPPLIVAHT DVALFKEGFPA+DAIKLMAEDG+NS LLEL+ES+DVAPYICG V A+GPVFPGETWRG ++VD +CP+P YSVVTMLI+TNDAF+GIDSD L + G+ K FPPAFDAGTE N+E CS+IPGP C SGN Q+GPGEG+IH+HRG HGVG +L EA YDWRNPVAE++I Sbjct: 1 MVNFTAAFAMASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPVYSVVTMLINTNDAFVGIDSDTLEL-GSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVG-DLEEASYDWRNPVAEIYI 220
BLAST of mRNA_L-elsbetiae_contig8756.17792.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI) HSP 1 Score: 308 bits (788), Expect = 7.630e-104 Identity = 144/200 (72.00%), Postives = 168/200 (84.00%), Query Frame = 1 Query: 103 ADAKEFKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTMEVDETVCPDPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKVFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPGEGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFIA 702 A+A E VRVRNLTY QPFSP +VAHTNDV++F+EGFPASDA+K+MAEDG+NS L+EL S DV PYICG V + P+FPG+TWRG M VDE++CPD QYSVV+MLI+TNDAF+GIDS+ L G KVFPPAFDAGTEANNELC+HIPGPAC +SGNM+DGPGEGFI + RGFHGVG +L EA YDWRNPVAEV +A Sbjct: 2 ANAGEVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLV--GTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVA 199
BLAST of mRNA_L-elsbetiae_contig8756.17792.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI) HSP 1 Score: 192 bits (488), Expect = 2.040e-57 Identity = 102/196 (52.04%), Postives = 128/196 (65.31%), Query Frame = 1 Query: 121 KVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTMEVDETVCPDPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKVFPPAFDAGTEANNELCSHIPGPACGMESGNMQD-GPG-EGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFIA 702 KVRV NLT++Q FSPP+IVAH LF G A AIKLMAEDGNN ++ +A CG AA+GP+ PG+TW G + D C +P YSVV L +TNDAF+GID K+FPPAFDAGTE NNE C+ +PG AC + ++ G G EGFIH+HRG +GVG +LS+A Y W+NPVAEV ++ Sbjct: 76 KVRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREG---GFCGFAAAEGPLLPGKTWNGEITFDTDKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGVG-DLSKADYGWKNPVAEVVVS 267
BLAST of mRNA_L-elsbetiae_contig8756.17792.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI) HSP 1 Score: 186 bits (472), Expect = 6.880e-56 Identity = 100/198 (50.51%), Postives = 124/198 (62.63%), Query Frame = 1 Query: 118 FKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTMEVDETVCPDPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKVFPPAFDAGTEANNELCSHIPGPACGMESG---NMQDGPGEGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFIA 702 +KVRV NLT++Q FSPP+IVAH LF +G A AIK MAE+G N + +A D CG AA+GP+ PG+TW G + D C P YSVV L +TNDAF+GID K+FPPAFDAGTE NNE C+ I G AC N+ EGFIH+HRG +GVG +LS+A YDW+NPVAEV ++ Sbjct: 4 YKVRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNRFIEIIATRED---GFCGFAAAEGPLLPGKTWNGEITFDANKCKRPVYSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGVG-DLSQADYDWKNPVAEVVVS 197
BLAST of mRNA_L-elsbetiae_contig8756.17792.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI) HSP 1 Score: 181 bits (458), Expect = 1.260e-53 Identity = 103/215 (47.91%), Postives = 133/215 (61.86%), Query Frame = 1 Query: 67 VFALASALYASCADAKEFKVRVRNLTYQQPFSPPLIVAHTNDVA-LFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTMEVDETVCPDPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKVFPPAFDAGTEANNELCSHIPGPACGMESGNMQD-GPG-EGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFIA 702 + +LAS S + K +KVRV NLT++Q FSPP+IVAH LF G A AIK MAE+G N G++++ + + CG A+GP+ PG+TW G + D C +P YSVV L +TNDAF+GID K FPPAFDAGTE NNE C+ +PG AC ++ G G EGFIH+HRG GVG +LS+A Y W NPVAEV ++ Sbjct: 1 MLSLASGGSTSGSSMKTYKVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVN-GMVKVIATRESG--FCGFAVAEGPLLPGKTWNGEITFDTNKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGVG-DLSKADYGWNNPVAEVVVS 211
BLAST of mRNA_L-elsbetiae_contig8756.17792.1 vs. uniprot
Match: D7G3Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z6_ECTSI) HSP 1 Score: 158 bits (400), Expect = 1.070e-44 Identity = 98/231 (42.42%), Postives = 133/231 (57.58%), Query Frame = 1 Query: 49 MVKYTAVFALASALYASCADA------KEFKVRVRNLTYQQPFSPPLIVAHTNDVA-LFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAAD--GPVFPGETWRGTMEVDETVCPDPQYSVVTMLIHTNDAFLGIDSDGLNMNGAV-KVFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPG---EGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFIA 702 MVK+ ALAS L + + +KVRV NLT++Q FS +IVAH LF EG A +AI ++AE+G + + +A CG A + G +FPG+TW G ++ D C DP YSVV L +TNDAF+GI K FPPAFDAG+E NNE C+ +PG AC + + ++ G EGFIH+HRGF G+G +LS+ Y W+NPVA V ++ Sbjct: 1 MVKFAFGLALASMLSLASGSKMRGSRMQTYKVRVTNLTFKQDFSAAIIVAHEKGSRPLFSEGAKARNAISMLAEEGLSGNVQNIATR---ERGFCGFAAPESKGLIFPGKTWEGKIQFDANKCKDPVYSVVAKLDNTNDAFMGIAGSKFPAGSCPSKHFPPAFDAGSETNNEKCTCMPGRACPKGTRDARERHGRNSEGFIHVHRGFQGIG-DLSKD-YGWQNPVAVVVVS 226
BLAST of mRNA_L-elsbetiae_contig8756.17792.1 vs. uniprot
Match: A0A7S4JAD9_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAD9_9STRA) HSP 1 Score: 146 bits (369), Expect = 8.080e-40 Identity = 80/194 (41.24%), Postives = 115/194 (59.28%), Query Frame = 1 Query: 121 KVRVRNLTYQQPFSPPLIVAHTNDVA-LFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTMEVDETVCPDPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKVFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPGEGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFI 699 K++V NLTYQQ FS ++ H L+ G PAS+++ +AEDG+ GL++ + ++ + A GPV PG + EVD+ P ++ +M + TND F+ ++ L + G V V+P D+GTE N E C+HIPGP CG + +G EGF+HIHRGFHG+G ELS GYDWRNP+ V + Sbjct: 58 KLKVTNLTYQQIFSDFFVMVHNKHATPLYTMGAPASESLAELAEDGSPQGLVDSYQK-EIGDGVLSVKPAVGPVPPGSSTIIEFEVDKDF---PLVTIASMAVVTNDCFVAVNGVAL-IPGDVDVYP-GLDSGTEKNTEDCAHIPGPPCGNSGARVTEGA-EGFVHIHRGFHGIGSELSAVGYDWRNPMMRVEV 244
BLAST of mRNA_L-elsbetiae_contig8756.17792.1 vs. uniprot
Match: A0A525CZJ5_9DELT (Spondin domain-containing protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A525CZJ5_9DELT) HSP 1 Score: 146 bits (368), Expect = 8.690e-40 Identity = 86/202 (42.57%), Postives = 117/202 (57.92%), Query Frame = 1 Query: 94 ASCADAKEFKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTMEVDETVCPDPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKVFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPGEGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFI 699 A + F+V + NLT Q FSPP+++AH ND LF G PAS+A+ +AEDG+ SGL+++AE+ P I G ADGPV PG + +E+D T + SV ML+ TNDAF + ++ A+DAG+E N+E CS IPGP CG G EG++HIH G HG ++S A +DW NPVA + I Sbjct: 41 ALAQGTRTFEVTITNLTGGQIFSPPIVLAHDNDFNLFTLGEPASEALTGLAEDGDTSGLVDMAEN---MPSIYGYAMADGPVLPGTS--AVVEID-THHTAKRLSVAGMLVTTNDAFFAVRGARTWGIFLEPLYASAYDAGSEVNSENCSDIPGPPCG-NGGVRNTADAEGYVHIHAGIHGTM-DISTAEFDWNNPVALIRI 234
BLAST of mRNA_L-elsbetiae_contig8756.17792.1 vs. uniprot
Match: A0A433PQD1_9FUNG (Spondin domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQD1_9FUNG) HSP 1 Score: 145 bits (365), Expect = 1.850e-39 Identity = 85/203 (41.87%), Postives = 117/203 (57.64%), Query Frame = 1 Query: 112 KEFKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTMEVDETVCPDPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKVFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPGEGFIHIHRGFHGVGGELSEAG----YDWRNPVAEVFIAAQ 708 K F + V+NL Y QPFSP L V H + LF+ G PAS A++ +AE G+ S + L + D ICG A G P T++GT+ + + C +P S+V ML TNDAF GI++ L + + PA+DAGTE NNE C ++ G C G GEGF+H+HRG HG+ +S+ G YDWRNPVA + ++ Q Sbjct: 26 KTFDITVQNLAYLQPFSPVLAVIHEPSIYLFQLGTPASAALRAVAEGGDPSKFVALFQ--DGLEGICGWSVAPGKTLPSTTYKGTVTISKP-CTNPHISIVNMLGITNDAFTGINTIPLYGELSKRFEVPAYDAGTEENNEDCQYVFG--CPGSPNLDTPGLGEGFVHVHRGVHGL--NVSKPGLSVDYDWRNPVAYITVSVQ 221 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8756.17792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8756.17792.1 >prot_L-elsbetiae_contig8756.17792.1 ID=prot_L-elsbetiae_contig8756.17792.1|Name=mRNA_L-elsbetiae_contig8756.17792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp PSFLLSSASPSIRLCKMVKYTAVFALASALYASCADAKEFKVRVRNLTYQback to top mRNA from alignment at L-elsbetiae_contig8756:1645..5185+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8756.17792.1 ID=mRNA_L-elsbetiae_contig8756.17792.1|Name=mRNA_L-elsbetiae_contig8756.17792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3541bp|location=Sequence derived from alignment at L-elsbetiae_contig8756:1645..5185+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8756:1645..5185+ >mRNA_L-elsbetiae_contig8756.17792.1 ID=mRNA_L-elsbetiae_contig8756.17792.1|Name=mRNA_L-elsbetiae_contig8756.17792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1422bp|location=Sequence derived from alignment at L-elsbetiae_contig8756:1645..5185+ (Laminarionema elsbetiae ELsaHSoW15)back to top |